2LL8A

Solution nmr structure of the specialized holo-acyl carrier protein rpa2022 from rhodopseudomonas palustris refined with nh rdcs, northeast structural genomics consortium target rpr324
Total Genus 34
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
34
sequence length
101
structure length
101
Chain Sequence
MTSTFDRVATIIAETCDIPRETITPESHAIDDLGIDSLDFLDIAFAIDKAFGIKLPLEKWTQEVNDGKATTEQYFVLKNLAARIDELVAAKGALEHHHHHH
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords Specialized acyl carrier protein
publication title Structure of a specialized acyl carrier protein essential for lipid A biosynthesis with very long-chain fatty acids in open and closed conformations.
pubmed doi rcsb
source organism Rhodopseudomonas palustris
total genus 34
structure length 101
sequence length 101
ec nomenclature
pdb deposition date 2011-10-31

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2ll8A00
2EHSA 5HVCA 2FADA 2MVUA 3EJDA 2CNRA 5EJDA 4BPGA 2MVVA 2AFEA 5KP8B 3GZMA 4PXHB 2JU2A 2KR5A 2MD9A 2MF4A 4PWVB 3LMOA 2FVFA 2L4BA 1HY8A 4BPFA 2CG5B 2GDWA 2JU1A 2FHSC 2FAEA 1X3OA 2XZ1C 2LPKA 2KGCA 2AFDA 2MR8A 2LTEA 2FQ2A 2K93A 2FACA 2FQ0A 2GDYA 3RG2A 2LIUA 2JGPA 2LKIA 2LIWA 2EHTA 2FQ1A 2LMLA 2N50A 5HV8A 1KLPA 2KGEA 2L9FA 2L0QA 2N6ZA 1NQ4A 4CA3A 5KP7B 2LL8A 2KOPA 2CGQA 4DG9A 2M5RA 2X2BA 1L0HA 2N5HA 2KOQA 2KG9A 2N5IA 3CE7A 4R0MA 2KORA 2K92A 5CZDB 1F80D 2L22A 2DNWA 2FVEA 4MRTC 2KWLA 2KOOA 1DV5A 2JQ4A 2GDXA 2KG6A 2AVAA 2VSQA 4H2WC 2K0YA 4IZ6A 1ACPA 2KG8A 2KW2A 3EJEA 4NEOA 1HQBA 2PNGA 3EJBA 4H2XC 4HKGA 2ROQA 2MR7A 5KP6B 2LOLA 1L0IA 2XZ0D 2K0XA 2KOSA 2MY5A 2N98A 3NY7B 1T8KA 2FVAA 2K2QA 2K94A 1VKUA 3GZLA 4H2YC 1DNYA 1AF8A 2CQ8A 2AF8A 2KGDA 1OR5A 2KGAA 2N6YA 4BPHA 2QNWA
chains in the Genus database with same CATH superfamily
5HVCA 2FADA 3M1MA 1YJWP 1M74A 2CNRA 4BPGA 2MVVA 2KR5A 4XFYA 1VQOP 5HGMA 1E0HA 2M8NA 3CXCO 1KQSO 2Z44A 4COPA 2JO0A 1X3OA 3G28A 3B5IA 1UNKA 2KGCA 2MR8A 2K5XA 2FQ2A 5BS2A 2FQ0A 5I4TG 2GDYA 2EHTA 1GXHA 2GZIA 1W2BO 5HV8A 3CCEP 1VQPP 1BXIA 2GZFA 3CCRP 1A43A 2M5RA 2N5HA 1YJNP 2KG9A 1QRJA 2LF4A 1VQKP 1D1DA 2DNWA 3CD6P 2FVEA 1Q86Q 2KOOA 3E2DA 2JQ4A 3CCVP 2BUOA 1IMPA 4IZ6A 4XRQA 4QKOA 3EJEA 2XV6A 1S72P 4U0EA 2ERHA 1RO0A 4HKGA 2GZJA 1ZNVA 2XZ0D 2JAZA 2KOSA 4XFZA 5F2NA 1T8KA 3DS0A 2NO8A 3MGEA 3CCJP 1KD1Q 4H2YC 3G4SP 4XROA 2QA4P 4BPHA 2QNWA 1RO2A 3EJDA 2EIAA 5EJDA 5KP8B 4PXHB 2MF4A 1IUQA 2MD9A 3B4QA 4M0IA 3DS4A 3LMOA 2KODA 1HY8A 5HGNA 3WBHA 2FHSC 1N8RQ 3DS3A 2LPKA 7CEIA 1EOQA 4COCA 4F37A 1VQ8P 3DS1A 1K9MQ 3HYBA 2FQ1A 2P9XA 4GR2A 3I55P 3CC4P 2LMLA 1K73Q 1Q7YQ 2OTLP 4CA3A 3G21A 2CGQA 2N5IA 1QVFO 2OARA 4XFXA 4U0BA 1M6NA 2KWLA 4PH0A 1QVGO 2AVAA 2VSQA 1ACPA 2KW2A 2WPTA 3U43A 1E6JP 1UJZA 2M8LA 1VQ5P 1AUMA 1L0IA 3CCUP 3I56P 1K30A 3DPHA 2FVAA 3CC2P 2XXMA 1VKUA 3GZLA 1DNYA 1AF8A 3CCLP 3CCQP 3G0VA 2PEMA 2JYLA 3DTJA 1CEIA 2AFEA 3GZMA 2JU2A 2OTJP 3HZQA 2FVFA 2L4BA 4BPFA 2FAEA 1IMQA 2JBGA 2K93A 2FACA 2CWOA 2JGPA 1Q82Q 2LIWA 1A8OA 4GR6A 5F2OA 1EMVA 4UHPB 2KGEA 2L0QA 2DGYA 2N6ZA 3CCSP 1AYIA 3NTEA 3P05A 3CPWO 5KP7B 3OW2O 1EIAA 1YITP 3VRLC 2KORA 2K92A 1VQ6P 3GKLC 3H0DA 5BS1A 3Q20A 1DV5A 2GDXA 2VLPA 2GYKA 2KG6A 4H2WC 2K0YA 1RNIA 3DS2A 2VLNA 1HQBA 2JYGA 1YJ9P 1NJIQ 2PNGA 2ONTA 3EJBA 3G1GA 2MR7A 4WYMA 3H4EA 3G71P 2EFJA 2MY5A 1Z6MA 1BAJA 4IPYA 2K94A 3DS5A 1OR5A 2KGAA 2N6YA 5EW5E 3G26A 2EHSA 2MVUA 1K8AQ 2EG5A 1JJ2O 2PEIA 4PWVB 1VHNA 1VQNP 2PY8A 2BHVA 1VQ9P 1FR2A 2PENA 1MZ8A 2PEQA 2CG5B 2GDWA 2JU1A 5HGOA 2XZ1C 1Q81Q 2AFDA 2LTEA 1M90Q 3GJNA 1KC8Q 2GZEA 2Z46A 3RG2A 2LIUA 2LKIA 2Z45A 1VQLP 4U0FA 5JPAA 4PH1A 3LRYA 2N50A 5HGLA 2QEXP 1KLPA 2L9FA 2PEKA 3CC7P 1ZMBA 5F2KA 1NQ4A 4U0CA 2K0DX 1GXGA 3G1IA 2LL8A 2KOPA 1VQ7P 3CCMP 1YIJP 1M6EX 4DG9A 2X2BA 4QNBA 1L0HA 2KOQA 3CE7A 3CMEP 4R0MA 1YI2P 2JB0A 4U0DA 2VLQA 2E1MA 1F80D 2L22A 5CZDB 1VQMP 4MRTC 1VQ4P 1YHQP 2KG8A 2PEOA 2VLOA 4NEOA 2GZGA 3G29A 4H2XC 2L6EA 2ROQA 5KP6B 3G6EP 2LOLA 2K0XA 2N98A 3NY7B 5DCKA 3CMAP 2K2QA 3RG6C 1M1KQ 4U0AA 2M8PA 2CQ8A 2AF8A 2KGDA 3H47A 2PEJA 1GPJA 2XT1A
chains in the Genus database with same CATH topology
2EHSA 5HVCA 2FADA 2MVUA 3EJDA 2CNRA 5EJDA 4BPGA 2MVVA 2AFEA 5KP8B 3GZMA 4PXHB 2JU2A 2KR5A 2MD9A 2MF4A 4PWVB 3LMOA 2FVFA 2L4BA 1HY8A 4BPFA 2CG5B 2GDWA 2JU1A 2FHSC 2FAEA 1X3OA 2XZ1C 2LPKA 2KGCA 2AFDA 2MR8A 2LTEA 2FQ2A 2K93A 2FACA 2FQ0A 2GDYA 3RG2A 2LIUA 2JGPA 2LKIA 2LIWA 2EHTA 2FQ1A 2LMLA 2N50A 5HV8A 1KLPA 2KGEA 2L9FA 2L0QA 2N6ZA 1NQ4A 4CA3A 5KP7B 2LL8A 2KOPA 2CGQA 4DG9A 2M5RA 2X2BA 1L0HA 2N5HA 2KOQA 2KG9A 2N5IA 3CE7A 4R0MA 2KORA 2K92A 5CZDB 1F80D 2L22A 2DNWA 2FVEA 4MRTC 2KWLA 2KOOA 1DV5A 2JQ4A 2GDXA 2KG6A 2AVAA 2VSQA 4H2WC 2K0YA 4IZ6A 1ACPA 2KG8A 2KW2A 3EJEA 4NEOA 1HQBA 2PNGA 3EJBA 4H2XC 4HKGA 2ROQA 2MR7A 5KP6B 2LOLA 1L0IA 2XZ0D 2K0XA 2KOSA 2MY5A 2N98A 3NY7B 1T8KA 2FVAA 2K2QA 2K94A 1VKUA 3GZLA 4H2YC 1DNYA 1AF8A 2CQ8A 2AF8A 2KGDA 1OR5A 2KGAA 2N6YA 4BPHA 2QNWA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2EHS A;  5HVC A;  2FAD A;  2MVU A;  3EJD A;  2CNR A;  5EJD A;  4BPG A;  2MVV A;  2AFE A;  5KP8 B;  3GZM A;  4PXH B;  2JU2 A;  2KR5 A;  2MD9 A;  2MF4 A;  4PWV B;  3LMO A;  2FVF A;  2L4B A;  1HY8 A;  4BPF A;  2CG5 B;  2GDW A;  2JU1 A;  2FHS C;  2FAE A;  1X3O A;  2XZ1 C;  2LPK A;  2KGC A;  2AFD A;  2MR8 A;  2LTE A;  2FQ2 A;  2K93 A;  2FAC A;  2FQ0 A;  2GDY A;  3RG2 A;  2LIU A;  2JGP A;  2LKI A;  2LIW A;  2EHT A;  2FQ1 A;  2LML A;  2N50 A;  5HV8 A;  1KLP A;  2KGE A;  2L9F A;  2L0Q A;  2N6Z A;  1NQ4 A;  4CA3 A;  5KP7 B;  2LL8 A;  2KOP A;  2CGQ A;  4DG9 A;  2M5R A;  2X2B A;  1L0H A;  2N5H A;  2KOQ A;  2KG9 A;  2N5I A;  3CE7 A;  4R0M A;  2KOR A;  2K92 A;  5CZD B;  1F80 D;  2L22 A;  2DNW A;  2FVE A;  4MRT C;  2KWL A;  2KOO A;  1DV5 A;  2JQ4 A;  2GDX A;  2KG6 A;  2AVA A;  2VSQ A;  4H2W C;  2K0Y A;  4IZ6 A;  1ACP A;  2KG8 A;  2KW2 A;  3EJE A;  4NEO A;  1HQB A;  2PNG A;  3EJB A;  4H2X C;  4HKG A;  2ROQ A;  2MR7 A;  5KP6 B;  2LOL A;  1L0I A;  2XZ0 D;  2K0X A;  2KOS A;  2MY5 A;  2N98 A;  3NY7 B;  1T8K A;  2FVA A;  2K2Q A;  2K94 A;  1VKU A;  3GZL A;  4H2Y C;  1DNY A;  1AF8 A;  2CQ8 A;  2AF8 A;  2KGD A;  1OR5 A;  2KGA A;  2N6Y A;  4BPH A;  2QNW A; 
#chains in the Genus database with same CATH topology
 5HVC A;  2FAD A;  3M1M A;  1YJW P;  1M74 A;  2CNR A;  4BPG A;  2MVV A;  2KR5 A;  4XFY A;  1VQO P;  5HGM A;  1E0H A;  2M8N A;  3CXC O;  1KQS O;  2Z44 A;  4COP A;  2JO0 A;  1X3O A;  3G28 A;  3B5I A;  1UNK A;  2KGC A;  2MR8 A;  2K5X A;  2FQ2 A;  5BS2 A;  2FQ0 A;  5I4T G;  2GDY A;  2EHT A;  1GXH A;  2GZI A;  1W2B O;  5HV8 A;  3CCE P;  1VQP P;  1BXI A;  2GZF A;  3CCR P;  1A43 A;  2M5R A;  2N5H A;  1YJN P;  2KG9 A;  1QRJ A;  2LF4 A;  1VQK P;  1D1D A;  2DNW A;  3CD6 P;  2FVE A;  1Q86 Q;  2KOO A;  3E2D A;  2JQ4 A;  3CCV P;  2BUO A;  1IMP A;  4IZ6 A;  4XRQ A;  4QKO A;  3EJE A;  2XV6 A;  1S72 P;  4U0E A;  2ERH A;  1RO0 A;  4HKG A;  2GZJ A;  1ZNV A;  2XZ0 D;  2JAZ A;  2KOS A;  4XFZ A;  5F2N A;  1T8K A;  3DS0 A;  2NO8 A;  3MGE A;  3CCJ P;  1KD1 Q;  4H2Y C;  3G4S P;  4XRO A;  2QA4 P;  4BPH A;  2QNW A;  1RO2 A;  3EJD A;  2EIA A;  5EJD A;  5KP8 B;  4PXH B;  2MF4 A;  1IUQ A;  2MD9 A;  3B4Q A;  4M0I A;  3DS4 A;  3LMO A;  2KOD A;  1HY8 A;  5HGN A;  3WBH A;  2FHS C;  1N8R Q;  3DS3 A;  2LPK A;  7CEI A;  1EOQ A;  4COC A;  4F37 A;  1VQ8 P;  3DS1 A;  1K9M Q;  3HYB A;  2FQ1 A;  2P9X A;  4GR2 A;  3I55 P;  3CC4 P;  2LML A;  1K73 Q;  1Q7Y Q;  2OTL P;  4CA3 A;  3G21 A;  2CGQ A;  2N5I A;  1QVF O;  2OAR A;  4XFX A;  4U0B A;  1M6N A;  2KWL A;  4PH0 A;  1QVG O;  2AVA A;  2VSQ A;  1ACP A;  2KW2 A;  2WPT A;  3U43 A;  1E6J P;  1UJZ A;  2M8L A;  1VQ5 P;  1AUM A;  1L0I A;  3CCU P;  3I56 P;  1K30 A;  3DPH A;  2FVA A;  3CC2 P;  2XXM A;  1VKU A;  3GZL A;  1DNY A;  1AF8 A;  3CCL P;  3CCQ P;  3G0V A;  2PEM A;  2JYL A;  3DTJ A;  1CEI A;  2AFE A;  3GZM A;  2JU2 A;  2OTJ P;  3HZQ A;  2FVF A;  2L4B A;  4BPF A;  2FAE A;  1IMQ A;  2JBG A;  2K93 A;  2FAC A;  2CWO A;  2JGP A;  1Q82 Q;  2LIW A;  1A8O A;  4GR6 A;  5F2O A;  1EMV A;  4UHP B;  2KGE A;  2L0Q A;  2DGY A;  2N6Z A;  3CCS P;  1AYI A;  3NTE A;  3P05 A;  3CPW O;  5KP7 B;  3OW2 O;  1EIA A;  1YIT P;  3VRL C;  2KOR A;  2K92 A;  1VQ6 P;  3GKL C;  3H0D A;  5BS1 A;  3Q20 A;  1DV5 A;  2GDX A;  2VLP A;  2GYK A;  2KG6 A;  4H2W C;  2K0Y A;  1RNI A;  3DS2 A;  2VLN A;  1HQB A;  2JYG A;  1YJ9 P;  1NJI Q;  2PNG A;  2ONT A;  3EJB A;  3G1G A;  2MR7 A;  4WYM A;  3H4E A;  3G71 P;  2EFJ A;  2MY5 A;  1Z6M A;  1BAJ A;  4IPY A;  2K94 A;  3DS5 A;  1OR5 A;  2KGA A;  2N6Y A;  5EW5 E;  3G26 A;  2EHS A;  2MVU A;  1K8A Q;  2EG5 A;  1JJ2 O;  2PEI A;  4PWV B;  1VHN A;  1VQN P;  2PY8 A;  2BHV A;  1VQ9 P;  1FR2 A;  2PEN A;  1MZ8 A;  2PEQ A;  2CG5 B;  2GDW A;  2JU1 A;  5HGO A;  2XZ1 C;  1Q81 Q;  2AFD A;  2LTE A;  1M90 Q;  3GJN A;  1KC8 Q;  2GZE A;  2Z46 A;  3RG2 A;  2LIU A;  2LKI A;  2Z45 A;  1VQL P;  4U0F A;  5JPA A;  4PH1 A;  3LRY A;  2N50 A;  5HGL A;  2QEX P;  1KLP A;  2L9F A;  2PEK A;  3CC7 P;  1ZMB A;  5F2K A;  1NQ4 A;  4U0C A;  2K0D X;  1GXG A;  3G1I A;  2LL8 A;  2KOP A;  1VQ7 P;  3CCM P;  1YIJ P;  1M6E X;  4DG9 A;  2X2B A;  4QNB A;  1L0H A;  2KOQ A;  3CE7 A;  3CME P;  4R0M A;  1YI2 P;  2JB0 A;  4U0D A;  2VLQ A;  2E1M A;  1F80 D;  2L22 A;  5CZD B;  1VQM P;  4MRT C;  1VQ4 P;  1YHQ P;  2KG8 A;  2PEO A;  2VLO A;  4NEO A;  2GZG A;  3G29 A;  4H2X C;  2L6E A;  2ROQ A;  5KP6 B;  3G6E P;  2LOL A;  2K0X A;  2N98 A;  3NY7 B;  5DCK A;  3CMA P;  2K2Q A;  3RG6 C;  1M1K Q;  4U0A A;  2M8P A;  2CQ8 A;  2AF8 A;  2KGD A;  3H47 A;  2PEJ A;  1GPJ A;  2XT1 A; 
#chains in the Genus database with same CATH homology
 2EHS A;  5HVC A;  2FAD A;  2MVU A;  3EJD A;  2CNR A;  5EJD A;  4BPG A;  2MVV A;  2AFE A;  5KP8 B;  3GZM A;  4PXH B;  2JU2 A;  2KR5 A;  2MD9 A;  2MF4 A;  4PWV B;  3LMO A;  2FVF A;  2L4B A;  1HY8 A;  4BPF A;  2CG5 B;  2GDW A;  2JU1 A;  2FHS C;  2FAE A;  1X3O A;  2XZ1 C;  2LPK A;  2KGC A;  2AFD A;  2MR8 A;  2LTE A;  2FQ2 A;  2K93 A;  2FAC A;  2FQ0 A;  2GDY A;  3RG2 A;  2LIU A;  2JGP A;  2LKI A;  2LIW A;  2EHT A;  2FQ1 A;  2LML A;  2N50 A;  5HV8 A;  1KLP A;  2KGE A;  2L9F A;  2L0Q A;  2N6Z A;  1NQ4 A;  4CA3 A;  5KP7 B;  2LL8 A;  2KOP A;  2CGQ A;  4DG9 A;  2M5R A;  2X2B A;  1L0H A;  2N5H A;  2KOQ A;  2KG9 A;  2N5I A;  3CE7 A;  4R0M A;  2KOR A;  2K92 A;  5CZD B;  1F80 D;  2L22 A;  2DNW A;  2FVE A;  4MRT C;  2KWL A;  2KOO A;  1DV5 A;  2JQ4 A;  2GDX A;  2KG6 A;  2AVA A;  2VSQ A;  4H2W C;  2K0Y A;  4IZ6 A;  1ACP A;  2KG8 A;  2KW2 A;  3EJE A;  4NEO A;  1HQB A;  2PNG A;  3EJB A;  4H2X C;  4HKG A;  2ROQ A;  2MR7 A;  5KP6 B;  2LOL A;  1L0I A;  2XZ0 D;  2K0X A;  2KOS A;  2MY5 A;  2N98 A;  3NY7 B;  1T8K A;  2FVA A;  2K2Q A;  2K94 A;  1VKU A;  3GZL A;  4H2Y C;  1DNY A;  1AF8 A;  2CQ8 A;  2AF8 A;  2KGD A;  1OR5 A;  2KGA A;  2N6Y A;  4BPH A;  2QNW A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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