2P9XA

Crystal structure of ph0832 from pyrococcus horikoshii ot3
Total Genus 37
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
37
sequence length
98
structure length
98
Chain Sequence
SKGRDILTKTIILALREVAPGLEAVLEAHLRATLNSGIELAYDDPQKFKEAVSKLFGEYSARLLEMVIISKLKGRLGEDIEANSLEELVSEIRKIYGE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Crystal structure of PH0832 from Pyrococcus horikoshii OT3
rcsb
molecule tags Structural genomics, unknown function
source organism Pyrococcus horikoshii
molecule keywords Hypothetical protein PH0832
total genus 37
structure length 98
sequence length 98
chains with identical sequence B, C, D
ec nomenclature
pdb deposition date 2007-03-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF11537 NitrOD5 Nitrosopumilus output domain 5
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.200 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A 2p9xA00
2P9XA
chains in the Genus database with same CATH superfamily
3CMAP 2N5IA 2KGEA 1E6JP 1FR2A 2FACA 1VQ8P 2JU1A 1VQLP 3G26A 3DS3A 2JU2A 3CCLP 2M8LA 1VQ4P 1GXGA 3LMOA 1AF8A 3HZQA 5F2NA 2FHSC 2GZGA 2PEMA 5EJDA 1AYIA 2L6EA 2M8PA 3LRYA 1M6NA 3CE7A 2MVVA 3DS5A 2EHSA 1MZ8A 1VQ9P 3CCQP 3EJEA 2JYLA 1KLPA 2OTLP 1ZNVA 2JGPA 2KW2A 3WBHA 3G4SP 3RG2A 2QEXP 3B4QA 1S72P 3CCMP 4H2YC 1QVFO 2NO8A 1EOQA 2K2QA 2KG6A 4PH1A 4IPYA 2KWLA 1VQKP 2JO0A 2CGQA 2FQ0A 1A8OA 4BPHA 2EG5A 5F2KA 1BAJA 3DS2A 3CC2P 2MY5A 2XV6A 3G29A 3GJNA 4H2WC 4WYMA 1VQNP 2K5XA 2AVAA 4XFZA 4F37A 2K0XA 2KODA 3CCUP 2CQ8A 1K30A 2GDWA 3GZMA 1QVGO 2CNRA 2GDXA 4QNBA 2LKIA 2XZ1C 2JAZA 1Q7YQ 1Q81Q 2XT1A 2K0YA 1E0HA 4U0CA 4CA3A 2L9FA 3EJBA 2FQ1A 1EMVA 4XFYA 3G28A 1DNYA 2K94A 2LIUA 4PXHB 1VKUA 1OR5A 3G1GA 4NEOA 2LPKA 2PNGA 2EHTA 2CWOA 3GKLC 4U0FA 3H0DA 2AFDA 4U0EA 2GYKA 1VQ7P 3G21A 4XFXA 5HGOA 4HKGA 2KGCA 1VQ6P 2FVEA 1L0HA 2P9XA 3DTJA 4UHPB 3CCJP 2Z45A 1KD1Q 2L4BA 3I56P 1HY8A 3CC7P 2LL8A 3CCEP 1DV5A 2CG5B 4H2XC 1GPJA 3G1IA 2EFJA 3OW2O 3HYBA 2EIAA 4R0MA 1D1DA 2KGAA 4COPA 2FVAA 3CD6P 5EW5E 1ACPA 2KOOA 1IMPA 1M1KQ 1NQ4A 1UNKA 2KG8A 1K9MQ 2OARA 3H4EA 2VSQA 5HVCA 1N8RQ 2MVUA 3DS0A 2DNWA 2JQ4A 5DCKA 1M74A 2GDYA 5JPAA 5F2OA 1KQSO 1Z6MA 1JJ2O 2DGYA 3GZLA 2M5RA 3E2DA 2GZJA 4U0AA 2QNWA 3B5IA 2AF8A 2N6YA 2KOQA 1F80D 4QKOA 3Q20A 5HGLA 1VHNA 1YJWP 5KP6B 2K0DX 2PEJA 2PEOA 2KOPA 3RG6C 4COCA 2N6ZA 2L22A 2ROQA 5KP8B 3H47A 3CMEP 4U0DA 2WPTA 2AFEA 1A43A 2VLPA 2KOSA 2ONTA 3CCVP 1IMQA 2QA4P 1RO2A 2BUOA 2GZIA 1RO0A 5I4TG 1K8AQ 4M0IA 5CZDB 2OTJP 1UJZA 2MD9A 1VQ5P 1AUMA 1YIJP 2LMLA 4BPFA 3VRLC 3CCRP 2E1MA 3DS1A 2L0QA 1EIAA 2PEQA 2KORA 2BHVA 1Q86Q 3G0VA 3CC4P 5BS1A 3P05A 1M6EX 2LOLA 3G6EP 2GZFA 4XROA 2FVFA 2KR5A 2LF4A 2XXMA 1IUQA 1HQBA 5HGMA 2N98A 1YJ9P 3CPWO 1Q82Q 1YI2P 2N5HA 1X3OA 2JYGA 2VLQA 7CEIA 2PY8A 3U43A 4PWVB 1GXHA 2FADA 1NJIQ 2VLOA 4PH0A 2FAEA 2PENA 1VQPP 4MRTC 4DG9A 2K93A 2N50A 2PEIA 3DS4A 4IZ6A 4GR2A 2KGDA 4U0BA 2PEKA 2KG9A 2FQ2A 1YITP 2MF4A 2VLNA 1VQMP 1T8KA 4BPGA 1YJNP 3G71P 1VQOP 1ZMBA 1W2BO 1QRJA 3DPHA 2X2BA 2Z46A 1L0IA 1M90Q 5HV8A 2MR8A 2JBGA 5BS2A 1KC8Q 5KP7B 2M8NA 1CEIA 2GZEA 2LTEA 2MR7A 3NTEA 5HGNA 2Z44A 3CXCO 4GR6A 3NY7B 1BXIA 3I55P 3EJDA 1YHQP 2XZ0D 3CCSP 2K92A 3M1MA 1RNIA 2ERHA 2LIWA 4XRQA 3MGEA 1K73Q 2JB0A
chains in the Genus database with same CATH topology
4XROA 2KODA 3CCUP 1K30A 1QVGO 3CMAP 2LF4A 1K9MQ 2OARA 2XXMA 3H4EA 4QNBA 1IUQA 1N8RQ 1Q7YQ 1Q81Q 5HGMA 1YJ9P 2XT1A 3DS0A 1E6JP 3CPWO 5DCKA 1Q82Q 1VQ8P 1M74A 5JPAA 5F2OA 1YI2P 1VQLP 3G26A 1KQSO 1JJ2O 3DS3A 2DGYA 2JYGA 3E2DA 3CCLP 4U0CA 2M8LA 1VQ4P 4U0AA 2PY8A 3B5IA 3HZQA 5F2NA 4XFYA 3G28A 1NJIQ 4PH0A 2PEMA 3Q20A 2L6EA 2M8PA 2PENA 1VQPP 5HGLA 3G1GA 3LRYA 1YJWP 2PEJA 2PEOA 2PEIA 3DS4A 1M6NA 4GR2A 3DS5A 4U0BA 2CWOA 2PEKA 1VQ9P 3CCQP 4U0FA 3RG6C 3H0DA 1YITP 4U0EA 4COCA 1VQ7P 3G21A 2JYLA 4XFXA 5HGOA 3H47A 3CMEP 4U0DA 1VQ6P 2OTLP 1A43A 2P9XA 3DTJA 1VQMP 3WBHA 2ONTA 3CCVP 2QA4P 3CCJP 1RO2A 2Z45A 3G4SP 1YJNP 1KD1Q 3I56P 2QEXP 2BUOA 3G71P 1VQOP 1RO0A 1ZMBA 1QRJA 3DPHA 1W2BO 1S72P 3CCMP 5I4TG 2Z46A 1QVFO 1EOQA 3CC7P 4PH1A 1K8AQ 1M90Q 4M0IA 4IPYA 5BS2A 2OTJP 1VQKP 3CCEP 1KC8Q 1VQ5P 1AUMA 1YIJP 2JO0A 3VRLC 2M8NA 3G1IA 3CCRP 2EFJA 1A8OA 2E1MA 2EG5A 3DS1A 5HGNA 3NTEA 5F2KA 2Z44A 1BAJA 3DS2A 3CXCO 3OW2O 4GR6A 3HYBA 3CC2P 1EIAA 2EIAA 2PEQA 3I55P 2XV6A 3G29A 1D1DA 1YHQP 2BHVA 4WYMA 4COPA 1Q86Q 1VQNP 3G0VA 3CC4P 3CCSP 3CD6P 5BS1A 3M1MA 3P05A 1M6EX 1RNIA 4XRQA 3G6EP 3MGEA 4XFZA 1K73Q 1M1KQ
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2P9X A; 
#chains in the Genus database with same CATH topology
 3CMA P;  2N5I A;  2KGE A;  1E6J P;  1FR2 A;  2FAC A;  1VQ8 P;  2JU1 A;  1VQL P;  3G26 A;  3DS3 A;  2JU2 A;  3CCL P;  2M8L A;  1VQ4 P;  1GXG A;  3LMO A;  1AF8 A;  3HZQ A;  5F2N A;  2FHS C;  2GZG A;  2PEM A;  5EJD A;  1AYI A;  2L6E A;  2M8P A;  3LRY A;  1M6N A;  3CE7 A;  2MVV A;  3DS5 A;  2EHS A;  1MZ8 A;  1VQ9 P;  3CCQ P;  3EJE A;  2JYL A;  1KLP A;  2OTL P;  1ZNV A;  2JGP A;  2KW2 A;  3WBH A;  3G4S P;  3RG2 A;  2QEX P;  3B4Q A;  1S72 P;  3CCM P;  4H2Y C;  1QVF O;  2NO8 A;  1EOQ A;  2K2Q A;  2KG6 A;  4PH1 A;  4IPY A;  2KWL A;  1VQK P;  2JO0 A;  2CGQ A;  2FQ0 A;  1A8O A;  4BPH A;  2EG5 A;  5F2K A;  1BAJ A;  3DS2 A;  3CC2 P;  2MY5 A;  2XV6 A;  3G29 A;  3GJN A;  4H2W C;  4WYM A;  1VQN P;  2K5X A;  2AVA A;  4XFZ A;  4F37 A;  2K0X A;  2KOD A;  3CCU P;  2CQ8 A;  1K30 A;  2GDW A;  3GZM A;  1QVG O;  2CNR A;  2GDX A;  4QNB A;  2LKI A;  2XZ1 C;  2JAZ A;  1Q7Y Q;  1Q81 Q;  2XT1 A;  2K0Y A;  1E0H A;  4U0C A;  4CA3 A;  2L9F A;  3EJB A;  2FQ1 A;  1EMV A;  4XFY A;  3G28 A;  1DNY A;  2K94 A;  2LIU A;  4PXH B;  1VKU A;  1OR5 A;  3G1G A;  4NEO A;  2LPK A;  2PNG A;  2EHT A;  2CWO A;  3GKL C;  4U0F A;  3H0D A;  2AFD A;  4U0E A;  2GYK A;  1VQ7 P;  3G21 A;  4XFX A;  5HGO A;  4HKG A;  2KGC A;  1VQ6 P;  2FVE A;  1L0H A;  2P9X A;  3DTJ A;  4UHP B;  3CCJ P;  2Z45 A;  1KD1 Q;  2L4B A;  3I56 P;  1HY8 A;  3CC7 P;  2LL8 A;  3CCE P;  1DV5 A;  2CG5 B;  4H2X C;  1GPJ A;  3G1I A;  2EFJ A;  3OW2 O;  3HYB A;  2EIA A;  4R0M A;  1D1D A;  2KGA A;  4COP A;  2FVA A;  3CD6 P;  5EW5 E;  1ACP A;  2KOO A;  1IMP A;  1M1K Q;  1NQ4 A;  1UNK A;  2KG8 A;  1K9M Q;  2OAR A;  3H4E A;  2VSQ A;  5HVC A;  1N8R Q;  2MVU A;  3DS0 A;  2DNW A;  2JQ4 A;  5DCK A;  1M74 A;  2GDY A;  5JPA A;  5F2O A;  1KQS O;  1Z6M A;  1JJ2 O;  2DGY A;  3GZL A;  2M5R A;  3E2D A;  2GZJ A;  4U0A A;  2QNW A;  3B5I A;  2AF8 A;  2N6Y A;  2KOQ A;  1F80 D;  4QKO A;  3Q20 A;  5HGL A;  1VHN A;  1YJW P;  5KP6 B;  2K0D X;  2PEJ A;  2PEO A;  2KOP A;  3RG6 C;  4COC A;  2N6Z A;  2L22 A;  2ROQ A;  5KP8 B;  3H47 A;  3CME P;  4U0D A;  2WPT A;  2AFE A;  1A43 A;  2VLP A;  2KOS A;  2ONT A;  3CCV P;  1IMQ A;  2QA4 P;  1RO2 A;  2BUO A;  2GZI A;  1RO0 A;  5I4T G;  1K8A Q;  4M0I A;  5CZD B;  2OTJ P;  1UJZ A;  2MD9 A;  1VQ5 P;  1AUM A;  1YIJ P;  2LML A;  4BPF A;  3VRL C;  3CCR P;  2E1M A;  3DS1 A;  2L0Q A;  1EIA A;  2PEQ A;  2KOR A;  2BHV A;  1Q86 Q;  3G0V A;  3CC4 P;  5BS1 A;  3P05 A;  1M6E X;  2LOL A;  3G6E P;  2GZF A;  4XRO A;  2FVF A;  2KR5 A;  2LF4 A;  2XXM A;  1IUQ A;  1HQB A;  5HGM A;  2N98 A;  1YJ9 P;  3CPW O;  1Q82 Q;  1YI2 P;  2N5H A;  1X3O A;  2JYG A;  2VLQ A;  7CEI A;  2PY8 A;  3U43 A;  4PWV B;  1GXH A;  2FAD A;  1NJI Q;  2VLO A;  4PH0 A;  2FAE A;  2PEN A;  1VQP P;  4MRT C;  4DG9 A;  2K93 A;  2N50 A;  2PEI A;  3DS4 A;  4IZ6 A;  4GR2 A;  2KGD A;  4U0B A;  2PEK A;  2KG9 A;  2FQ2 A;  1YIT P;  2MF4 A;  2VLN A;  1VQM P;  1T8K A;  4BPG A;  1YJN P;  3G71 P;  1VQO P;  1ZMB A;  1W2B O;  1QRJ A;  3DPH A;  2X2B A;  2Z46 A;  1L0I A;  1M90 Q;  5HV8 A;  2MR8 A;  2JBG A;  5BS2 A;  1KC8 Q;  5KP7 B;  2M8N A;  1CEI A;  2GZE A;  2LTE A;  2MR7 A;  3NTE A;  5HGN A;  2Z44 A;  3CXC O;  4GR6 A;  3NY7 B;  1BXI A;  3I55 P;  3EJD A;  1YHQ P;  2XZ0 D;  3CCS P;  2K92 A;  3M1M A;  1RNI A;  2ERH A;  2LIW A;  4XRQ A;  3MGE A;  1K73 Q;  2JB0 A; 
#chains in the Genus database with same CATH homology
 4XRO A;  2KOD A;  3CCU P;  1K30 A;  1QVG O;  3CMA P;  2LF4 A;  1K9M Q;  2OAR A;  2XXM A;  3H4E A;  4QNB A;  1IUQ A;  1N8R Q;  1Q7Y Q;  1Q81 Q;  5HGM A;  1YJ9 P;  2XT1 A;  3DS0 A;  1E6J P;  3CPW O;  5DCK A;  1Q82 Q;  1VQ8 P;  1M74 A;  5JPA A;  5F2O A;  1YI2 P;  1VQL P;  3G26 A;  1KQS O;  1JJ2 O;  3DS3 A;  2DGY A;  2JYG A;  3E2D A;  3CCL P;  4U0C A;  2M8L A;  1VQ4 P;  4U0A A;  2PY8 A;  3B5I A;  3HZQ A;  5F2N A;  4XFY A;  3G28 A;  1NJI Q;  4PH0 A;  2PEM A;  3Q20 A;  2L6E A;  2M8P A;  2PEN A;  1VQP P;  5HGL A;  3G1G A;  3LRY A;  1YJW P;  2PEJ A;  2PEO A;  2PEI A;  3DS4 A;  1M6N A;  4GR2 A;  3DS5 A;  4U0B A;  2CWO A;  2PEK A;  1VQ9 P;  3CCQ P;  4U0F A;  3RG6 C;  3H0D A;  1YIT P;  4U0E A;  4COC A;  1VQ7 P;  3G21 A;  2JYL A;  4XFX A;  5HGO A;  3H47 A;  3CME P;  4U0D A;  1VQ6 P;  2OTL P;  1A43 A;  2P9X A;  3DTJ A;  1VQM P;  3WBH A;  2ONT A;  3CCV P;  2QA4 P;  3CCJ P;  1RO2 A;  2Z45 A;  3G4S P;  1YJN P;  1KD1 Q;  3I56 P;  2QEX P;  2BUO A;  3G71 P;  1VQO P;  1RO0 A;  1ZMB A;  1QRJ A;  3DPH A;  1W2B O;  1S72 P;  3CCM P;  5I4T G;  2Z46 A;  1QVF O;  1EOQ A;  3CC7 P;  4PH1 A;  1K8A Q;  1M90 Q;  4M0I A;  4IPY A;  5BS2 A;  2OTJ P;  1VQK P;  3CCE P;  1KC8 Q;  1VQ5 P;  1AUM A;  1YIJ P;  2JO0 A;  3VRL C;  2M8N A;  3G1I A;  3CCR P;  2EFJ A;  1A8O A;  2E1M A;  2EG5 A;  3DS1 A;  5HGN A;  3NTE A;  5F2K A;  2Z44 A;  1BAJ A;  3DS2 A;  3CXC O;  3OW2 O;  4GR6 A;  3HYB A;  3CC2 P;  1EIA A;  2EIA A;  2PEQ A;  3I55 P;  2XV6 A;  3G29 A;  1D1D A;  1YHQ P;  2BHV A;  4WYM A;  4COP A;  1Q86 Q;  1VQN P;  3G0V A;  3CC4 P;  3CCS P;  3CD6 P;  5BS1 A;  3M1M A;  3P05 A;  1M6E X;  1RNI A;  4XRQ A;  3G6E P;  3MGE A;  4XFZ A;  1K73 Q;  1M1K Q; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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