1E0HA

Inhibitor protein im9 bound to its partner e9 dnase
Total Genus 29
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
29
sequence length
86
structure length
86
Chain Sequence
MELKHSISDYTEAEFLQLVTTICNADTSSEEELVKLVTHFEEMTEHPSGSDLIYYPKEGDDDSPSGIVNTVKQWRAANGKSGFKQG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title NMR Investigation of the Interaction of the Inhibitor Protein Im9 with its Partner DNase
pubmed rcsb
molecule tags Bacteriocin
molecule keywords IMMUNITY PROTEIN FOR COLICIN E9
total genus 29
structure length 86
sequence length 86
ec nomenclature
pdb deposition date 2000-03-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01320 Colicin_Pyocin Colicin immunity protein / pyocin immunity protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.20 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A Colicin E immunity protein 1e0hA00
2NO8A 1AYIA 2VLNA 4F37A 3GJNA 2JB0A 1UNKA 2WPTA 1ZNVA 2VLQA 2VLOA 1IMQA 1EMVA 2K0DX 2K5XA 4QKOA 2GZGA 1CEIA 4UHPB 2GZFA 2GZIA 2GZEA 3GKLC 1GXGA 1UJZA 3U43A 2GYKA 1BXIA 2GZJA 2ERHA 2JAZA 7CEIA 1IMPA 2VLPA 1E0HA 1GXHA 2JBGA 1FR2A 5EW5E 1MZ8A
chains in the Genus database with same CATH superfamily
2KOPA 1YJWP 5HGNA 4XFYA 1K8AQ 3CC4P 4R0MA 4U0EA 2GDWA 2KG9A 2XV6A 3DS2A 4UHPB 2PEIA 4GR6A 1KC8Q 2L9FA 7CEIA 2EHSA 4CA3A 3LRYA 2CQ8A 1AF8A 3G1GA 2VLNA 2FVAA 4M0IA 3CD6P 2FADA 4MRTC 1ZMBA 2MR8A 2JO0A 3G6EP 3Q20A 4BPGA 1M6EX 2CGQA 3DS4A 1HQBA 2LPKA 5DCKA 2LMLA 1BXIA 2ERHA 1KLPA 2LL8A 5KP7B 1QRJA 2ROQA 4GR2A 3H47A 1OR5A 1NQ4A 2FVFA 1VQ8P 2VLQA 1VQ7P 1S72P 2PEMA 2LF4A 2FAEA 3CE7A 4U0DA 3CMEP 3CCJP 5BS1A 2GYKA 2BUOA 5JPAA 2N6YA 5HV8A 3G4SP 2AF8A 2JB0A 2PEOA 3RG6C 2FVEA 1IMQA 4H2XC 4QNBA 5CZDB 2GZIA 3M1MA 2K93A 3CMAP 1YIJP 3U43A 5KP8B 1VQ5P 1IUQA 3HZQA 5EW5E 1VQKP 2KWLA 1DNYA 2EG5A 2FQ2A 2JQ4A 3CCLP 4F37A 2EFJA 3G21A 2M8PA 2LTEA 1QVGO 2K0DX 3B4QA 2P9XA 4H2YC 4XFZA 1Q7YQ 3G28A 3DS5A 1EOQA 1VQPP 1UJZA 2MF4A 3DTJA 5I4TG 1IMPA 4IZ6A 1K73Q 2EIAA 1A8OA 5HVCA 1E6JP 3CC7P 1AYIA 2JGPA 3GJNA 1W2BO 5F2NA 1K30A 2LIUA 2X2BA 1EIAA 2XZ1C 2VLPA 4WYMA 4IPYA 2KW2A 2AFDA 1VQOP 1ZNVA 3EJDA 3CCUP 3DS3A 2MR7A 3B5IA 3CC2P 1KD1Q 2QEXP 4BPHA 4DG9A 1GPJA 1D1DA 2AVAA 4XRQA 1YJ9P 3GKLC 2K94A 2EHTA 2N50A 3NY7B 4PXHB 1YITP 2AFEA 1VQ6P 2KG8A 2K92A 2DGYA 1RNIA 1YI2P 1JJ2O 2M5RA 1M1KQ 2FACA 1AUMA 2BHVA 2MY5A 2L0QA 2GZEA 4BPFA 2Z45A 3G29A 1KQSO 1Q82Q 2KOOA 3DS0A 2PEKA 1YJNP 2NO8A 1Z6MA 2KOQA 1VQMP 2N5HA 2K2QA 2LIWA 1L0HA 1DV5A 2VSQA 2LOLA 1N8RQ 3NTEA 2N98A 3E2DA 2Z46A 1T8KA 2N6ZA 2KGEA 2JAZA 1M6NA 3I56P 2MD9A 3G0VA 2JYLA 2L6EA 1MZ8A 2QNWA 2FQ0A 3WBHA 1VQ4P 5KP6B 2OTLP 2KR5A 1A43A 2GZGA 1ACPA 2MVVA 2CWOA 1HY8A 2PEQA 2OTJP 1L0IA 1NJIQ 1M90Q 5HGOA 2CG5B 2PENA 1VQNP 3CCVP 3G1IA 1K9MQ 5HGLA 2WPTA 3LMOA 5F2KA 3DS1A 3G71P 1X3OA 1QVFO 2M8LA 3GZMA 1RO2A 4PH0A 2FHSC 3H4EA 4PH1A 2E1MA 3EJEA 2PEJA 2K0YA 2LKIA 1UNKA 3I55P 3HYBA 3MGEA 1VQ9P 2K0XA 2CNRA 2L22A 2K5XA 2KG6A 4COPA 5HGMA 3G26A 2GDXA 2XT1A 2KORA 1Q86Q 2GZJA 2PNGA 1YHQP 5F2OA 1FR2A 1RO0A 2ONTA 4NEOA 2XXMA 2Z44A 2KGCA 2QA4P 1Q81Q 2GDYA 2JU1A 2N5IA 1EMVA 4QKOA 4U0FA 2M8NA 3P05A 1VKUA 1GXGA 3CCSP 1F80D 1M74A 4COCA 4XFXA 1E0HA 4U0CA 3CCMP 2PY8A 2JBGA 4XROA 3CCQP 2OARA 4PWVB 2KGAA 3CPWO 2JU2A 3EJBA 3CCEP 2KGDA 2KODA 2KOSA 2JYGA 3GZLA 1BAJA 2MVUA 4U0BA 4U0AA 3CXCO 3OW2O 1VHNA 1VQLP 3RG2A 2FQ1A 3H0DA 2DNWA 4H2WC 3VRLC 5EJDA 2VLOA 2L4BA 1CEIA 2GZFA 3DPHA 5BS2A 1GXHA 2XZ0D 4HKGA 3CCRP
chains in the Genus database with same CATH topology
2NO8A 1AYIA 2VLNA 4F37A 3GJNA 2JB0A 1UNKA 2WPTA 1ZNVA 2VLQA 2VLOA 1IMQA 1EMVA 2K0DX 2K5XA 4QKOA 2GZGA 1CEIA 4UHPB 2GZFA 2GZIA 2GZEA 3GKLC 1GXGA 1UJZA 3U43A 2GYKA 1BXIA 2GZJA 2ERHA 2JAZA 7CEIA 1IMPA 2VLPA 1E0HA 1GXHA 2JBGA 1FR2A 5EW5E 1MZ8A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2NO8 A;  1AYI A;  2VLN A;  4F37 A;  3GJN A;  2JB0 A;  1UNK A;  2WPT A;  1ZNV A;  2VLQ A;  2VLO A;  1IMQ A;  1EMV A;  2K0D X;  2K5X A;  4QKO A;  2GZG A;  1CEI A;  4UHP B;  2GZF A;  2GZI A;  2GZE A;  3GKL C;  1GXG A;  1UJZ A;  3U43 A;  2GYK A;  1BXI A;  2GZJ A;  2ERH A;  2JAZ A;  7CEI A;  1IMP A;  2VLP A;  1E0H A;  1GXH A;  2JBG A;  1FR2 A;  5EW5 E;  1MZ8 A; 
#chains in the Genus database with same CATH topology
 2KOP A;  1YJW P;  5HGN A;  4XFY A;  1K8A Q;  3CC4 P;  4R0M A;  4U0E A;  2GDW A;  2KG9 A;  2XV6 A;  3DS2 A;  4UHP B;  2PEI A;  4GR6 A;  1KC8 Q;  2L9F A;  7CEI A;  2EHS A;  4CA3 A;  3LRY A;  2CQ8 A;  1AF8 A;  3G1G A;  2VLN A;  2FVA A;  4M0I A;  3CD6 P;  2FAD A;  4MRT C;  1ZMB A;  2MR8 A;  2JO0 A;  3G6E P;  3Q20 A;  4BPG A;  1M6E X;  2CGQ A;  3DS4 A;  1HQB A;  2LPK A;  5DCK A;  2LML A;  1BXI A;  2ERH A;  1KLP A;  2LL8 A;  5KP7 B;  1QRJ A;  2ROQ A;  4GR2 A;  3H47 A;  1OR5 A;  1NQ4 A;  2FVF A;  1VQ8 P;  2VLQ A;  1VQ7 P;  1S72 P;  2PEM A;  2LF4 A;  2FAE A;  3CE7 A;  4U0D A;  3CME P;  3CCJ P;  5BS1 A;  2GYK A;  2BUO A;  5JPA A;  2N6Y A;  5HV8 A;  3G4S P;  2AF8 A;  2JB0 A;  2PEO A;  3RG6 C;  2FVE A;  1IMQ A;  4H2X C;  4QNB A;  5CZD B;  2GZI A;  3M1M A;  2K93 A;  3CMA P;  1YIJ P;  3U43 A;  5KP8 B;  1VQ5 P;  1IUQ A;  3HZQ A;  5EW5 E;  1VQK P;  2KWL A;  1DNY A;  2EG5 A;  2FQ2 A;  2JQ4 A;  3CCL P;  4F37 A;  2EFJ A;  3G21 A;  2M8P A;  2LTE A;  1QVG O;  2K0D X;  3B4Q A;  2P9X A;  4H2Y C;  4XFZ A;  1Q7Y Q;  3G28 A;  3DS5 A;  1EOQ A;  1VQP P;  1UJZ A;  2MF4 A;  3DTJ A;  5I4T G;  1IMP A;  4IZ6 A;  1K73 Q;  2EIA A;  1A8O A;  5HVC A;  1E6J P;  3CC7 P;  1AYI A;  2JGP A;  3GJN A;  1W2B O;  5F2N A;  1K30 A;  2LIU A;  2X2B A;  1EIA A;  2XZ1 C;  2VLP A;  4WYM A;  4IPY A;  2KW2 A;  2AFD A;  1VQO P;  1ZNV A;  3EJD A;  3CCU P;  3DS3 A;  2MR7 A;  3B5I A;  3CC2 P;  1KD1 Q;  2QEX P;  4BPH A;  4DG9 A;  1GPJ A;  1D1D A;  2AVA A;  4XRQ A;  1YJ9 P;  3GKL C;  2K94 A;  2EHT A;  2N50 A;  3NY7 B;  4PXH B;  1YIT P;  2AFE A;  1VQ6 P;  2KG8 A;  2K92 A;  2DGY A;  1RNI A;  1YI2 P;  1JJ2 O;  2M5R A;  1M1K Q;  2FAC A;  1AUM A;  2BHV A;  2MY5 A;  2L0Q A;  2GZE A;  4BPF A;  2Z45 A;  3G29 A;  1KQS O;  1Q82 Q;  2KOO A;  3DS0 A;  2PEK A;  1YJN P;  2NO8 A;  1Z6M A;  2KOQ A;  1VQM P;  2N5H A;  2K2Q A;  2LIW A;  1L0H A;  1DV5 A;  2VSQ A;  2LOL A;  1N8R Q;  3NTE A;  2N98 A;  3E2D A;  2Z46 A;  1T8K A;  2N6Z A;  2KGE A;  2JAZ A;  1M6N A;  3I56 P;  2MD9 A;  3G0V A;  2JYL A;  2L6E A;  1MZ8 A;  2QNW A;  2FQ0 A;  3WBH A;  1VQ4 P;  5KP6 B;  2OTL P;  2KR5 A;  1A43 A;  2GZG A;  1ACP A;  2MVV A;  2CWO A;  1HY8 A;  2PEQ A;  2OTJ P;  1L0I A;  1NJI Q;  1M90 Q;  5HGO A;  2CG5 B;  2PEN A;  1VQN P;  3CCV P;  3G1I A;  1K9M Q;  5HGL A;  2WPT A;  3LMO A;  5F2K A;  3DS1 A;  3G71 P;  1X3O A;  1QVF O;  2M8L A;  3GZM A;  1RO2 A;  4PH0 A;  2FHS C;  3H4E A;  4PH1 A;  2E1M A;  3EJE A;  2PEJ A;  2K0Y A;  2LKI A;  1UNK A;  3I55 P;  3HYB A;  3MGE A;  1VQ9 P;  2K0X A;  2CNR A;  2L22 A;  2K5X A;  2KG6 A;  4COP A;  5HGM A;  3G26 A;  2GDX A;  2XT1 A;  2KOR A;  1Q86 Q;  2GZJ A;  2PNG A;  1YHQ P;  5F2O A;  1FR2 A;  1RO0 A;  2ONT A;  4NEO A;  2XXM A;  2Z44 A;  2KGC A;  2QA4 P;  1Q81 Q;  2GDY A;  2JU1 A;  2N5I A;  1EMV A;  4QKO A;  4U0F A;  2M8N A;  3P05 A;  1VKU A;  1GXG A;  3CCS P;  1F80 D;  1M74 A;  4COC A;  4XFX A;  1E0H A;  4U0C A;  3CCM P;  2PY8 A;  2JBG A;  4XRO A;  3CCQ P;  2OAR A;  4PWV B;  2KGA A;  3CPW O;  2JU2 A;  3EJB A;  3CCE P;  2KGD A;  2KOD A;  2KOS A;  2JYG A;  3GZL A;  1BAJ A;  2MVU A;  4U0B A;  4U0A A;  3CXC O;  3OW2 O;  1VHN A;  1VQL P;  3RG2 A;  2FQ1 A;  3H0D A;  2DNW A;  4H2W C;  3VRL C;  5EJD A;  2VLO A;  2L4B A;  1CEI A;  2GZF A;  3DPH A;  5BS2 A;  1GXH A;  2XZ0 D;  4HKG A;  3CCR P; 
#chains in the Genus database with same CATH homology
 2NO8 A;  1AYI A;  2VLN A;  4F37 A;  3GJN A;  2JB0 A;  1UNK A;  2WPT A;  1ZNV A;  2VLQ A;  2VLO A;  1IMQ A;  1EMV A;  2K0D X;  2K5X A;  4QKO A;  2GZG A;  1CEI A;  4UHP B;  2GZF A;  2GZI A;  2GZE A;  3GKL C;  1GXG A;  1UJZ A;  3U43 A;  2GYK A;  1BXI A;  2GZJ A;  2ERH A;  2JAZ A;  7CEI A;  1IMP A;  2VLP A;  1E0H A;  1GXH A;  2JBG A;  1FR2 A;  5EW5 E;  1MZ8 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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