1E0HA

Inhibitor protein im9 bound to its partner e9 dnase
Total Genus 29
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
29
sequence length
86
structure length
86
Chain Sequence
MELKHSISDYTEAEFLQLVTTICNADTSSEEELVKLVTHFEEMTEHPSGSDLIYYPKEGDDDSPSGIVNTVKQWRAANGKSGFKQG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Bacteriocin
molecule keywords IMMUNITY PROTEIN FOR COLICIN E9
publication title NMR Investigation of the Interaction of the Inhibitor Protein Im9 with its Partner DNase
pubmed rcsb
total genus 29
structure length 86
sequence length 86
ec nomenclature
pdb deposition date 2000-03-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01320 Colicin_Pyocin Colicin immunity protein / pyocin immunity protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.20 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A Colicin E immunity protein 1e0hA00
3U43A 2GZEA 4UHPB 2JBGA 2GZFA 2GZGA 1FR2A 1E0HA 1BXIA 1ZNVA 1IMQA 2GZJA 1EMVA 2GZIA 2K5XA 1GXGA 2VLQA 2GYKA 1MZ8A 2ERHA 2JAZA 2NO8A 4QKOA 1IMPA 7CEIA 1UNKA 2VLOA 2WPTA 1CEIA 1UJZA 2JB0A 3GKLC 4F37A 1AYIA 1GXHA 2K0DX 3GJNA 2VLNA 5EW5E 2VLPA
chains in the Genus database with same CATH superfamily
1M6EX 2GDWA 1QRJA 1RO2A 2MR8A 5F2NA 2GZIA 3LMOA 1NJIQ 1NQ4A 2KGEA 4QKOA 5HGMA 1ACPA 3B5IA 2FADA 5EW5E 1YJNP 5KP8B 2JO0A 2BUOA 2XXMA 1VQ5P 1AF8A 2KG6A 1X3OA 4H2WC 1M1KQ 1MZ8A 2ERHA 2KG9A 2PEOA 2K2QA 4GR2A 2EIAA 3M1MA 1YHQP 2AF8A 4PH0A 3CMAP 3CCMP 2N50A 3B4QA 2GZFA 4U0CA 1VQNP 4BPHA 1KLPA 3CCLP 1Q81Q 3CE7A 2XT1A 2VSQA 2NO8A 5F2OA 3DS5A 4PH1A 2N5IA 4U0BA 2MF4A 1GXHA 1YJWP 4QNBA 5I4TG 1RNIA 3DS1A 4XFYA 2N6ZA 2GYKA 2CNRA 2JU1A 3G1IA 3LRYA 2XZ1C 3CCSP 2FAEA 2GZEA 4UHPB 3CCQP 1L0IA 3DTJA 4IPYA 1VQKP 2Z46A 3VRLC 2FVEA 1KQSO 3EJBA 2L22A 1EOQA 2DGYA 1HQBA 2EG5A 1UNKA 4XFXA 3H4EA 2K93A 1AYIA 2MVUA 1K73Q 3CCUP 2EHSA 1VKUA 4U0FA 2N6YA 5HVCA 4M0IA 3CXCO 2E1MA 1E0HA 1A43A 5DCKA 3CC7P 2M8LA 2KOSA 2P9XA 7CEIA 1ZMBA 1E6JP 3G26A 2JB0A 3HYBA 4WYMA 2PEJA 5KP6B 2BHVA 2JBGA 4H2XC 2KG8A 2QA4P 2GZGA 3H0DA 2EFJA 2FVAA 2FQ1A 2PEQA 1W2BO 3EJEA 1IMQA 1OR5A 2K5XA 1N8RQ 2FQ0A 5KP7B 5BS2A 3CMEP 4COPA 1Q82Q 1CEIA 2Z44A 2FACA 4BPFA 1YITP 2CWOA 1BXIA 5BS1A 2L9FA 2AFDA 3G21A 3Q20A 2X2BA 1M6NA 1KC8Q 5JPAA 4U0DA 3CCEP 1VQLP 2PEKA 4F37A 5HGLA 2CGQA 3G0VA 2JYGA 2L4BA 2KOPA 3HZQA 1FR2A 3NTEA 3P05A 2M8NA 1QVGO 5CZDB 2CQ8A 3DPHA 3I55P 4XROA 2KR5A 1Z6MA 2DNWA 3OW2O 2L6EA 2XZ0D 2KODA 2KWLA 5EJDA 2K0YA 4DG9A 2K0DX 3CPWO 1DV5A 3U43A 5F2KA 3RG6C 4MRTC 2KW2A 4PWVB 3DS0A 2JGPA 2M8PA 4IZ6A 2PY8A 2OTJP 3G6EP 4COCA 4BPGA 1QVFO 2VLQA 2LIWA 1KD1Q 1RO0A 2FVFA 1L0HA 3NY7B 3H47A 2WPTA 2PNGA 3DS4A 2OARA 3GJNA 2VLPA 2LL8A 1VQ9P 1VQOP 1VQ4P 2XV6A 1F80D 3DS3A 2MR7A 2K94A 2KOOA 2GZJA 1EMVA 2FHSC 4XFZA 2JQ4A 1VQ6P 2L0QA 3DS2A 1DNYA 1BAJA 4PXHB 3CC2P 3CCJP 1YJ9P 2FQ2A 2N5HA 1GXGA 4XRQA 1D1DA 2AFEA 2CG5B 1VQMP 2JAZA 2AVAA 1IMPA 3GKLC 2MY5A 1AUMA 2MVVA 1K30A 3MGEA 3G1GA 3G28A 1VQ8P 3RG2A 1M74A 1VHNA 3GZLA 1S72P 1ZNVA 1JJ2O 2KGDA 4H2YC 2QNWA 2JYLA 2QEXP 1EIAA 3CD6P 2LOLA 1M90Q 3WBHA 4R0MA 2ROQA 2LIUA 1A8OA 2VLNA 1IUQA 2KOQA 1VQPP 2LTEA 2KGCA 4U0AA 2GDXA 5HGOA 4CA3A 2LF4A 5HV8A 4GR6A 3EJDA 1K8AQ 1HY8A 1Q86Q 2N98A 3E2DA 1GPJA 1UJZA 2LMLA 1VQ7P 4NEOA 3GZMA 5HGNA 3G4SP 1YIJP 2Z45A 2OTLP 3CCRP 3G29A 2GDYA 3I56P 2KGAA 1T8KA 2M5RA 2PEMA 2LKIA 4HKGA 2JU2A 2PEIA 2KORA 2K92A 4U0EA 3G71P 2PENA 1Q7YQ 2MD9A 1YI2P 2LPKA 1K9MQ 2EHTA 2VLOA 3CCVP 2K0XA 2ONTA 3CC4P
chains in the Genus database with same CATH topology
3U43A 2GZEA 4UHPB 2JBGA 2GZFA 2GZGA 1FR2A 1E0HA 1BXIA 1ZNVA 1IMQA 2GZJA 1EMVA 2GZIA 2K5XA 1GXGA 2VLQA 2GYKA 1MZ8A 2ERHA 2JAZA 2NO8A 4QKOA 1IMPA 7CEIA 1UNKA 2VLOA 2WPTA 1CEIA 1UJZA 2JB0A 3GKLC 4F37A 1AYIA 1GXHA 2K0DX 3GJNA 2VLNA 5EW5E 2VLPA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3U43 A;  2GZE A;  4UHP B;  2JBG A;  2GZF A;  2GZG A;  1FR2 A;  1E0H A;  1BXI A;  1ZNV A;  1IMQ A;  2GZJ A;  1EMV A;  2GZI A;  2K5X A;  1GXG A;  2VLQ A;  2GYK A;  1MZ8 A;  2ERH A;  2JAZ A;  2NO8 A;  4QKO A;  1IMP A;  7CEI A;  1UNK A;  2VLO A;  2WPT A;  1CEI A;  1UJZ A;  2JB0 A;  3GKL C;  4F37 A;  1AYI A;  1GXH A;  2K0D X;  3GJN A;  2VLN A;  5EW5 E;  2VLP A; 
#chains in the Genus database with same CATH topology
 1M6E X;  2GDW A;  1QRJ A;  1RO2 A;  2MR8 A;  5F2N A;  2GZI A;  3LMO A;  1NJI Q;  1NQ4 A;  2KGE A;  4QKO A;  5HGM A;  1ACP A;  3B5I A;  2FAD A;  5EW5 E;  1YJN P;  5KP8 B;  2JO0 A;  2BUO A;  2XXM A;  1VQ5 P;  1AF8 A;  2KG6 A;  1X3O A;  4H2W C;  1M1K Q;  1MZ8 A;  2ERH A;  2KG9 A;  2PEO A;  2K2Q A;  4GR2 A;  2EIA A;  3M1M A;  1YHQ P;  2AF8 A;  4PH0 A;  3CMA P;  3CCM P;  2N50 A;  3B4Q A;  2GZF A;  4U0C A;  1VQN P;  4BPH A;  1KLP A;  3CCL P;  1Q81 Q;  3CE7 A;  2XT1 A;  2VSQ A;  2NO8 A;  5F2O A;  3DS5 A;  4PH1 A;  2N5I A;  4U0B A;  2MF4 A;  1GXH A;  1YJW P;  4QNB A;  5I4T G;  1RNI A;  3DS1 A;  4XFY A;  2N6Z A;  2GYK A;  2CNR A;  2JU1 A;  3G1I A;  3LRY A;  2XZ1 C;  3CCS P;  2FAE A;  2GZE A;  4UHP B;  3CCQ P;  1L0I A;  3DTJ A;  4IPY A;  1VQK P;  2Z46 A;  3VRL C;  2FVE A;  1KQS O;  3EJB A;  2L22 A;  1EOQ A;  2DGY A;  1HQB A;  2EG5 A;  1UNK A;  4XFX A;  3H4E A;  2K93 A;  1AYI A;  2MVU A;  1K73 Q;  3CCU P;  2EHS A;  1VKU A;  4U0F A;  2N6Y A;  5HVC A;  4M0I A;  3CXC O;  2E1M A;  1E0H A;  1A43 A;  5DCK A;  3CC7 P;  2M8L A;  2KOS A;  2P9X A;  7CEI A;  1ZMB A;  1E6J P;  3G26 A;  2JB0 A;  3HYB A;  4WYM A;  2PEJ A;  5KP6 B;  2BHV A;  2JBG A;  4H2X C;  2KG8 A;  2QA4 P;  2GZG A;  3H0D A;  2EFJ A;  2FVA A;  2FQ1 A;  2PEQ A;  1W2B O;  3EJE A;  1IMQ A;  1OR5 A;  2K5X A;  1N8R Q;  2FQ0 A;  5KP7 B;  5BS2 A;  3CME P;  4COP A;  1Q82 Q;  1CEI A;  2Z44 A;  2FAC A;  4BPF A;  1YIT P;  2CWO A;  1BXI A;  5BS1 A;  2L9F A;  2AFD A;  3G21 A;  3Q20 A;  2X2B A;  1M6N A;  1KC8 Q;  5JPA A;  4U0D A;  3CCE P;  1VQL P;  2PEK A;  4F37 A;  5HGL A;  2CGQ A;  3G0V A;  2JYG A;  2L4B A;  2KOP A;  3HZQ A;  1FR2 A;  3NTE A;  3P05 A;  2M8N A;  1QVG O;  5CZD B;  2CQ8 A;  3DPH A;  3I55 P;  4XRO A;  2KR5 A;  1Z6M A;  2DNW A;  3OW2 O;  2L6E A;  2XZ0 D;  2KOD A;  2KWL A;  5EJD A;  2K0Y A;  4DG9 A;  2K0D X;  3CPW O;  1DV5 A;  3U43 A;  5F2K A;  3RG6 C;  4MRT C;  2KW2 A;  4PWV B;  3DS0 A;  2JGP A;  2M8P A;  4IZ6 A;  2PY8 A;  2OTJ P;  3G6E P;  4COC A;  4BPG A;  1QVF O;  2VLQ A;  2LIW A;  1KD1 Q;  1RO0 A;  2FVF A;  1L0H A;  3NY7 B;  3H47 A;  2WPT A;  2PNG A;  3DS4 A;  2OAR A;  3GJN A;  2VLP A;  2LL8 A;  1VQ9 P;  1VQO P;  1VQ4 P;  2XV6 A;  1F80 D;  3DS3 A;  2MR7 A;  2K94 A;  2KOO A;  2GZJ A;  1EMV A;  2FHS C;  4XFZ A;  2JQ4 A;  1VQ6 P;  2L0Q A;  3DS2 A;  1DNY A;  1BAJ A;  4PXH B;  3CC2 P;  3CCJ P;  1YJ9 P;  2FQ2 A;  2N5H A;  1GXG A;  4XRQ A;  1D1D A;  2AFE A;  2CG5 B;  1VQM P;  2JAZ A;  2AVA A;  1IMP A;  3GKL C;  2MY5 A;  1AUM A;  2MVV A;  1K30 A;  3MGE A;  3G1G A;  3G28 A;  1VQ8 P;  3RG2 A;  1M74 A;  1VHN A;  3GZL A;  1S72 P;  1ZNV A;  1JJ2 O;  2KGD A;  4H2Y C;  2QNW A;  2JYL A;  2QEX P;  1EIA A;  3CD6 P;  2LOL A;  1M90 Q;  3WBH A;  4R0M A;  2ROQ A;  2LIU A;  1A8O A;  2VLN A;  1IUQ A;  2KOQ A;  1VQP P;  2LTE A;  2KGC A;  4U0A A;  2GDX A;  5HGO A;  4CA3 A;  2LF4 A;  5HV8 A;  4GR6 A;  3EJD A;  1K8A Q;  1HY8 A;  1Q86 Q;  2N98 A;  3E2D A;  1GPJ A;  1UJZ A;  2LML A;  1VQ7 P;  4NEO A;  3GZM A;  5HGN A;  3G4S P;  1YIJ P;  2Z45 A;  2OTL P;  3CCR P;  3G29 A;  2GDY A;  3I56 P;  2KGA A;  1T8K A;  2M5R A;  2PEM A;  2LKI A;  4HKG A;  2JU2 A;  2PEI A;  2KOR A;  2K92 A;  4U0E A;  3G71 P;  2PEN A;  1Q7Y Q;  2MD9 A;  1YI2 P;  2LPK A;  1K9M Q;  2EHT A;  2VLO A;  3CCV P;  2K0X A;  2ONT A;  3CC4 P; 
#chains in the Genus database with same CATH homology
 3U43 A;  2GZE A;  4UHP B;  2JBG A;  2GZF A;  2GZG A;  1FR2 A;  1E0H A;  1BXI A;  1ZNV A;  1IMQ A;  2GZJ A;  1EMV A;  2GZI A;  2K5X A;  1GXG A;  2VLQ A;  2GYK A;  1MZ8 A;  2ERH A;  2JAZ A;  2NO8 A;  4QKO A;  1IMP A;  7CEI A;  1UNK A;  2VLO A;  2WPT A;  1CEI A;  1UJZ A;  2JB0 A;  3GKL C;  4F37 A;  1AYI A;  1GXH A;  2K0D X;  3GJN A;  2VLN A;  5EW5 E;  2VLP A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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