1E0HA

Inhibitor protein im9 bound to its partner e9 dnase
Total Genus 29
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
29
sequence length
86
structure length
86
Chain Sequence
MELKHSISDYTEAEFLQLVTTICNADTSSEEELVKLVTHFEEMTEHPSGSDLIYYPKEGDDDSPSGIVNTVKQWRAANGKSGFKQG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords IMMUNITY PROTEIN FOR COLICIN E9
publication title NMR Investigation of the Interaction of the Inhibitor Protein Im9 with its Partner DNase
pubmed rcsb
molecule tags Bacteriocin
total genus 29
structure length 86
sequence length 86
ec nomenclature
pdb deposition date 2000-03-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01320 Colicin_Pyocin Colicin immunity protein / pyocin immunity protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.20 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A Colicin E immunity protein 1e0hA00
1UNKA 2JAZA 1EMVA 2VLOA 4F37A 2JBGA 1BXIA 7CEIA 2VLQA 1IMPA 1MZ8A 2JB0A 2VLNA 2GYKA 3GKLC 1GXHA 4UHPB 3GJNA 2GZFA 1UJZA 2WPTA 2GZGA 2VLPA 2ERHA 1FR2A 5EW5E 2K0DX 1E0HA 1IMQA 2NO8A 2GZIA 3U43A 2GZEA 2GZJA 4QKOA 1GXGA 1ZNVA 2K5XA 1AYIA 1CEIA
chains in the Genus database with same CATH superfamily
2FVFA 2EFJA 2LOLA 2FQ2A 1VQ5P 3B5IA 2XT1A 2MD9A 2M8NA 1Q86Q 1K30A 1M6EX 2K93A 2KG9A 2GZJA 4QKOA 4PWVB 1BAJA 2L9FA 2CG5B 2PNGA 2LPKA 1N8RQ 2ROQA 3DS1A 4XFXA 3CC7P 7CEIA 1M1KQ 2M5RA 3GJNA 3CMAP 1K8AQ 2KR5A 2FHSC 1L0IA 3EJDA 3G26A 3U43A 1GXGA 5F2NA 2JGPA 2MF4A 2VLOA 3M1MA 2N6YA 3WBHA 3DTJA 2K2QA 2MR8A 3RG6C 2JU2A 3HYBA 2M8LA 3OW2O 4H2YC 1VQPP 4IZ6A 2GZGA 1AF8A 3CCMP 1VQ4P 5HGNA 2KOQA 1QRJA 2NO8A 2FVAA 3RG2A 1OR5A 3CCUP 1K73Q 3DS2A 3G21A 2PY8A 2KGAA 1ACPA 1NQ4A 5F2KA 1RO0A 4NEOA 1VKUA 2QA4P 1YJNP 3G6EP 1NJIQ 3H47A 2ERHA 5HVCA 1Q7YQ 2GDYA 1IMQA 3CCJP 2QNWA 3CD6P 5HGMA 2KOPA 4R0MA 2VLQA 3DS5A 1YIJP 2VSQA 4H2XC 1EIAA 1VQ7P 2DNWA 2KGCA 2FVEA 3H0DA 2K5XA 3Q20A 4DG9A 2PEKA 1YJWP 1Q81Q 1VQ8P 2LMLA 2XZ1C 1M74A 1X3OA 2QEXP 2KGDA 1MZ8A 1YJ9P 2KG6A 3G29A 2DGYA 5KP7B 2K0XA 1E0HA 3CCSP 2EHSA 2FAEA 4PH0A 1DV5A 2M8PA 2E1MA 2CWOA 3DS4A 3NY7B 3I56P 4U0CA 2JB0A 2GYKA 2WPTA 1A8OA 2JYGA 2LKIA 2N6ZA 1VQKP 1D1DA 2JU1A 4U0DA 1EMVA 4BPGA 5KP6B 5HGLA 3G0VA 2PENA 3DPHA 2KOOA 3LMOA 3NTEA 1JJ2O 2VLPA 4MRTC 5EW5E 2AFEA 5I4TG 3CCVP 1YI2P 4XFYA 3CCQP 5KP8B 2FACA 2K0YA 3DS0A 2OTLP 3G4SP 2LF4A 2FADA 2AF8A 2N98A 2JBGA 1QVGO 4COPA 1S72P 2EHTA 3GKLC 4BPFA 5EJDA 2L22A 2OARA 1YHQP 1VHNA 3G71P 4HKGA 1UNKA 2AFDA 1F80D 2KW2A 2Z45A 1VQNP 1ZMBA 5HGOA 2P9XA 3CXCO 1T8KA 3EJEA 2AVAA 2N50A 1W2BO 1GXHA 2LIUA 4UHPB 1UJZA 2XZ0D 2LIWA 2L0QA 4WYMA 3I55P 5HV8A 3HZQA 3E2DA 2X2BA 3G1IA 2N5HA 3DS3A 1KC8Q 3P05A 3LRYA 2ONTA 3CMEP 2PEOA 2KOSA 1M90Q 2VLNA 3MGEA 3GZMA 2GZFA 2XXMA 2L4BA 3CC4P 1KLPA 4U0BA 2GZEA 4QNBA 1ZNVA 2CQ8A 1AYIA 1CEIA 5BS2A 2JAZA 4F37A 2OTJP 2KG8A 1IMPA 3G28A 3H4EA 2LTEA 4IPYA 1YITP 1AUMA 2GZIA 3CC2P 4BPHA 5DCKA 2MVVA 4XROA 4CA3A 1GPJA 5CZDB 1M6NA 1HY8A 2FQ0A 2K94A 1KQSO 3EJBA 5F2OA 1L0HA 4PH1A 2L6EA 1Q82Q 5BS1A 1VQ6P 4GR2A 4GR6A 2EIAA 2XV6A 3CE7A 4U0AA 1VQLP 2JYLA 1BXIA 2PEMA 2GDXA 4U0EA 1RNIA 3GZLA 4XRQA 2JO0A 2MY5A 3CCLP 1KD1Q 3CCEP 2MR7A 1K9MQ 2PEJA 2BUOA 2JQ4A 2PEIA 2K0DX 2LL8A 1DNYA 1E6JP 2CGQA 2CNRA 3VRLC 4H2WC 4XFZA 1HQBA 2N5IA 1EOQA 1VQOP 1VQ9P 4U0FA 1QVFO 4PXHB 1VQMP 1IUQA 3CPWO 2KWLA 1FR2A 2EG5A 3CCRP 5JPAA 2KGEA 2GDWA 2Z44A 2KODA 2FQ1A 2MVUA 2BHVA 1A43A 2Z46A 3B4QA 4COCA 1RO2A 3G1GA 2K92A 1Z6MA 4M0IA 2KORA 2PEQA
chains in the Genus database with same CATH topology
1UNKA 2JAZA 1EMVA 2VLOA 4F37A 2JBGA 1BXIA 7CEIA 2VLQA 1IMPA 1MZ8A 2JB0A 2VLNA 2GYKA 3GKLC 1GXHA 4UHPB 3GJNA 2GZFA 1UJZA 2WPTA 2GZGA 2VLPA 2ERHA 1FR2A 5EW5E 2K0DX 1E0HA 1IMQA 2NO8A 2GZIA 3U43A 2GZEA 2GZJA 4QKOA 1GXGA 1ZNVA 2K5XA 1AYIA 1CEIA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1UNK A;  2JAZ A;  1EMV A;  2VLO A;  4F37 A;  2JBG A;  1BXI A;  7CEI A;  2VLQ A;  1IMP A;  1MZ8 A;  2JB0 A;  2VLN A;  2GYK A;  3GKL C;  1GXH A;  4UHP B;  3GJN A;  2GZF A;  1UJZ A;  2WPT A;  2GZG A;  2VLP A;  2ERH A;  1FR2 A;  5EW5 E;  2K0D X;  1E0H A;  1IMQ A;  2NO8 A;  2GZI A;  3U43 A;  2GZE A;  2GZJ A;  4QKO A;  1GXG A;  1ZNV A;  2K5X A;  1AYI A;  1CEI A; 
#chains in the Genus database with same CATH topology
 2FVF A;  2EFJ A;  2LOL A;  2FQ2 A;  1VQ5 P;  3B5I A;  2XT1 A;  2MD9 A;  2M8N A;  1Q86 Q;  1K30 A;  1M6E X;  2K93 A;  2KG9 A;  2GZJ A;  4QKO A;  4PWV B;  1BAJ A;  2L9F A;  2CG5 B;  2PNG A;  2LPK A;  1N8R Q;  2ROQ A;  3DS1 A;  4XFX A;  3CC7 P;  7CEI A;  1M1K Q;  2M5R A;  3GJN A;  3CMA P;  1K8A Q;  2KR5 A;  2FHS C;  1L0I A;  3EJD A;  3G26 A;  3U43 A;  1GXG A;  5F2N A;  2JGP A;  2MF4 A;  2VLO A;  3M1M A;  2N6Y A;  3WBH A;  3DTJ A;  2K2Q A;  2MR8 A;  3RG6 C;  2JU2 A;  3HYB A;  2M8L A;  3OW2 O;  4H2Y C;  1VQP P;  4IZ6 A;  2GZG A;  1AF8 A;  3CCM P;  1VQ4 P;  5HGN A;  2KOQ A;  1QRJ A;  2NO8 A;  2FVA A;  3RG2 A;  1OR5 A;  3CCU P;  1K73 Q;  3DS2 A;  3G21 A;  2PY8 A;  2KGA A;  1ACP A;  1NQ4 A;  5F2K A;  1RO0 A;  4NEO A;  1VKU A;  2QA4 P;  1YJN P;  3G6E P;  1NJI Q;  3H47 A;  2ERH A;  5HVC A;  1Q7Y Q;  2GDY A;  1IMQ A;  3CCJ P;  2QNW A;  3CD6 P;  5HGM A;  2KOP A;  4R0M A;  2VLQ A;  3DS5 A;  1YIJ P;  2VSQ A;  4H2X C;  1EIA A;  1VQ7 P;  2DNW A;  2KGC A;  2FVE A;  3H0D A;  2K5X A;  3Q20 A;  4DG9 A;  2PEK A;  1YJW P;  1Q81 Q;  1VQ8 P;  2LML A;  2XZ1 C;  1M74 A;  1X3O A;  2QEX P;  2KGD A;  1MZ8 A;  1YJ9 P;  2KG6 A;  3G29 A;  2DGY A;  5KP7 B;  2K0X A;  1E0H A;  3CCS P;  2EHS A;  2FAE A;  4PH0 A;  1DV5 A;  2M8P A;  2E1M A;  2CWO A;  3DS4 A;  3NY7 B;  3I56 P;  4U0C A;  2JB0 A;  2GYK A;  2WPT A;  1A8O A;  2JYG A;  2LKI A;  2N6Z A;  1VQK P;  1D1D A;  2JU1 A;  4U0D A;  1EMV A;  4BPG A;  5KP6 B;  5HGL A;  3G0V A;  2PEN A;  3DPH A;  2KOO A;  3LMO A;  3NTE A;  1JJ2 O;  2VLP A;  4MRT C;  5EW5 E;  2AFE A;  5I4T G;  3CCV P;  1YI2 P;  4XFY A;  3CCQ P;  5KP8 B;  2FAC A;  2K0Y A;  3DS0 A;  2OTL P;  3G4S P;  2LF4 A;  2FAD A;  2AF8 A;  2N98 A;  2JBG A;  1QVG O;  4COP A;  1S72 P;  2EHT A;  3GKL C;  4BPF A;  5EJD A;  2L22 A;  2OAR A;  1YHQ P;  1VHN A;  3G71 P;  4HKG A;  1UNK A;  2AFD A;  1F80 D;  2KW2 A;  2Z45 A;  1VQN P;  1ZMB A;  5HGO A;  2P9X A;  3CXC O;  1T8K A;  3EJE A;  2AVA A;  2N50 A;  1W2B O;  1GXH A;  2LIU A;  4UHP B;  1UJZ A;  2XZ0 D;  2LIW A;  2L0Q A;  4WYM A;  3I55 P;  5HV8 A;  3HZQ A;  3E2D A;  2X2B A;  3G1I A;  2N5H A;  3DS3 A;  1KC8 Q;  3P05 A;  3LRY A;  2ONT A;  3CME P;  2PEO A;  2KOS A;  1M90 Q;  2VLN A;  3MGE A;  3GZM A;  2GZF A;  2XXM A;  2L4B A;  3CC4 P;  1KLP A;  4U0B A;  2GZE A;  4QNB A;  1ZNV A;  2CQ8 A;  1AYI A;  1CEI A;  5BS2 A;  2JAZ A;  4F37 A;  2OTJ P;  2KG8 A;  1IMP A;  3G28 A;  3H4E A;  2LTE A;  4IPY A;  1YIT P;  1AUM A;  2GZI A;  3CC2 P;  4BPH A;  5DCK A;  2MVV A;  4XRO A;  4CA3 A;  1GPJ A;  5CZD B;  1M6N A;  1HY8 A;  2FQ0 A;  2K94 A;  1KQS O;  3EJB A;  5F2O A;  1L0H A;  4PH1 A;  2L6E A;  1Q82 Q;  5BS1 A;  1VQ6 P;  4GR2 A;  4GR6 A;  2EIA A;  2XV6 A;  3CE7 A;  4U0A A;  1VQL P;  2JYL A;  1BXI A;  2PEM A;  2GDX A;  4U0E A;  1RNI A;  3GZL A;  4XRQ A;  2JO0 A;  2MY5 A;  3CCL P;  1KD1 Q;  3CCE P;  2MR7 A;  1K9M Q;  2PEJ A;  2BUO A;  2JQ4 A;  2PEI A;  2K0D X;  2LL8 A;  1DNY A;  1E6J P;  2CGQ A;  2CNR A;  3VRL C;  4H2W C;  4XFZ A;  1HQB A;  2N5I A;  1EOQ A;  1VQO P;  1VQ9 P;  4U0F A;  1QVF O;  4PXH B;  1VQM P;  1IUQ A;  3CPW O;  2KWL A;  1FR2 A;  2EG5 A;  3CCR P;  5JPA A;  2KGE A;  2GDW A;  2Z44 A;  2KOD A;  2FQ1 A;  2MVU A;  2BHV A;  1A43 A;  2Z46 A;  3B4Q A;  4COC A;  1RO2 A;  3G1G A;  2K92 A;  1Z6M A;  4M0I A;  2KOR A;  2PEQ A; 
#chains in the Genus database with same CATH homology
 1UNK A;  2JAZ A;  1EMV A;  2VLO A;  4F37 A;  2JBG A;  1BXI A;  7CEI A;  2VLQ A;  1IMP A;  1MZ8 A;  2JB0 A;  2VLN A;  2GYK A;  3GKL C;  1GXH A;  4UHP B;  3GJN A;  2GZF A;  1UJZ A;  2WPT A;  2GZG A;  2VLP A;  2ERH A;  1FR2 A;  5EW5 E;  2K0D X;  1E0H A;  1IMQ A;  2NO8 A;  2GZI A;  3U43 A;  2GZE A;  2GZJ A;  4QKO A;  1GXG A;  1ZNV A;  2K5X A;  1AYI A;  1CEI A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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