2M5RA

Solution structure of holo-acyl carrier protein of leishmania major
Total Genus 19
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
19
sequence length
80
structure length
80
Chain Sequence
MNDVLTRVLEVVKNFEKVDASKVTPESHFVKDLGLNSLDVVEVVFAIEQEFILDIPDHDAEKIQSIPDAVEYIAQNPMAK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title NMR structures of the apo- and holo- forms of the acyl carrier protein of Leishmania major
rcsb
source organism Leishmania major
molecule tags Lipid binding protein
molecule keywords Acyl carrier protein
total genus 19
structure length 80
sequence length 80
ec nomenclature
pdb deposition date 2013-03-07

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2m5rA00
2FVEA 2AVAA 1VKUA 1L0IA 4R0MA 2K93A 3LMOA 2N6ZA 2JU1A 2EHSA 2KOQA 2KG6A 2KGDA 2GDXA 3GZMA 2KOSA 2MVVA 2FVFA 1DNYA 3RG2A 4IZ6A 1HY8A 2LOLA 2KGEA 3GZLA 1L0HA 1AF8A 2VSQA 2KOPA 2KGAA 2KOOA 2FQ1A 2KWLA 2MR7A 1F80D 3EJEA 4NEOA 2FQ0A 2PNGA 3EJDA 2MY5A 2CGQA 2FHSC 2N50A 2L4BA 2MF4A 4BPFA 4H2WC 4BPGA 2K2QA 2FVAA 2LTEA 2N6YA 4MRTC 2JQ4A 2QNWA 2CQ8A 2CG5B 2KGCA 2CNRA 4CA3A 2JU2A 2ROQA 2LMLA 2MR8A 2GDWA 2K94A 5CZDB 2JGPA 2LL8A 2AFEA 2AF8A 2AFDA 2KR5A 2L9FA 1HQBA 2K0YA 4HKGA 2L0QA 2FQ2A 2X2BA 4BPHA 1OR5A 2KORA 2EHTA 1NQ4A 4PWVB 3EJBA 5EJDA 2LKIA 5KP7B 1ACPA 1X3OA 2MVUA 2KW2A 2LIWA 2FADA 2KG9A 2N5HA 5HV8A 5KP8B 2DNWA 4H2XC 2KG8A 2N5IA 2XZ0D 4H2YC 4DG9A 1KLPA 2GDYA 2K92A 3CE7A 2FACA 2XZ1C 2L22A 4PXHB 2MD9A 1T8KA 2N98A 1DV5A 2K0XA 2M5RA 2LPKA 2FAEA 2LIUA 5HVCA 3NY7B 5KP6B
chains in the Genus database with same CATH superfamily
3M1MA 3CD6P 4U0FA 2WPTA 1IMQA 1K30A 1VQLP 1BAJA 2EG5A 2M8NA 2KOQA 3B5IA 3OW2O 2GDXA 3GZMA 1ZMBA 2KOSA 3CCEP 1KD1Q 1D1DA 4COCA 2EFJA 2EIAA 1Q82Q 2KGEA 1AF8A 1Q86Q 2VSQA 3CCMP 2XXMA 1F80D 3DS2A 2MY5A 4F37A 2MF4A 3LRYA 3H47A 1VQ4P 4MRTC 2QA4P 2VLQA 3E2DA 2JU2A 2ROQA 2LMLA 2LL8A 2AFEA 2DGYA 2AFDA 3DS3A 4PH1A 1YHQP 3MGEA 2FQ2A 1OR5A 2KORA 2XV6A 2Z44A 3G1GA 5KP7B 2K5XA 2KW2A 3DS4A 1E6JP 4U0DA 5KP8B 4H2XC 4DG9A 2GDYA 3CCSP 2K92A 1RNIA 2JYLA 2ONTA 2XZ1C 2L22A 2K0DX 2PEJA 3CCUP 2GZIA 1T8KA 2L6EA 2LPKA 1VQPP 3CPWO 2JYGA 4QNBA 5HVCA 5JPAA 3NY7B 2GYKA 5KP6B 2FVEA 1GXHA 1QRJA 1VQ9P 2K93A 3I55P 3WBHA 2N6ZA 4IPYA 2JB0A 2JU1A 3CMEP 1YITP 2VLNA 2FVFA 4XRQA 1DNYA 1M90Q 3RG2A 4IZ6A 2GZGA 2LOLA 3DTJA 2OTLP 5DCKA 2E1MA 1L0HA 2KGAA 2FQ1A 3CC4P 2KWLA 1Q7YQ 3EJEA 5HGOA 2CWOA 2PY8A 2FQ0A 1UNKA 3EJDA 5HGNA 2FHSC 3DS5A 2N50A 2L4BA 4U0EA 4COPA 4BPFA 2PEMA 2M8PA 2PEQA 2JQ4A 1W2BO 2JBGA 2QNWA 3VRLC 2KODA 4GR6A 1BXIA 1QVFO 2MR8A 3P05A 2K94A 1K9MQ 2JGPA 1UJZA 2KR5A 2L9FA 2K0YA 2L0QA 4BPHA 1RO2A 1VQOP 1K8AQ 1VQNP 5EJDA 3EJBA 2LKIA 3HYBA 4U0BA 2PENA 3G26A 1E0HA 2KG9A 2N5HA 2M8LA 1RO0A 1KLPA 2VLPA 2OARA 3H4EA 3CE7A 2JO0A 4PXHB 1VQ8P 5F2KA 2Z45A 1DV5A 3G29A 3RG6C 2LIUA 1VQ6P 5HGLA 1VKUA 1A8OA 3LMOA 2KG6A 1A43A 2MVVA 1NJIQ 1M6EX 1HY8A 3GZLA 1AYIA 2KOOA 1YJWP 1AUMA 3DS0A 5I4TG 4NEOA 1Z6MA 1EOQA 2CGQA 4XFYA 4H2WC 2FVAA 2LTEA 2N6YA 1GPJA 3Q20A 2XT1A 2CQ8A 2CG5B 5BS2A 1JJ2O 7CEIA 3NTEA 3CMAP 3B4QA 5CZDB 3G4SP 2BHVA 3I56P 3G71P 1HQBA 2X2BA 4PWVB 2BUOA 1ACPA 1X3OA 5HGMA 2MVUA 2LIWA 2LF4A 5HV8A 1YJNP 2GZFA 2KG8A 2N5IA 2XZ0D 3CC7P 1YI2P 3G28A 1YIJP 2PEKA 4QKOA 4PH0A 3G21A 4GR2A 2MD9A 4UHPB 2FAEA 3GKLC 2GZJA 1Q81Q 3DS1A 2AVAA 1L0IA 4R0MA 3CXCO 1ZNVA 1IMPA 2EHSA 4U0CA 2KGDA 3G6EP 2P9XA 3CCRP 3CC2P 2VLOA 1N8RQ 4XROA 5BS1A 1M6NA 3CCJP 3HZQA 2KOPA 1S72P 1GXGA 4U0AA 2MR7A 2PEOA 3CCVP 1MZ8A 2PNGA 4XFXA 4BPGA 2ERHA 2K2QA 2QEXP 1K73Q 1FR2A 2NO8A 2KGCA 2CNRA 3GJNA 4CA3A 3U43A 4M0IA 2GDWA 2AF8A 4HKGA 1VHNA 4WYMA 1EMVA 1M74A 1EIAA 2PEIA 1VQMP 1YJ9P 2EHTA 1NQ4A 3H0DA 1VQ7P 4XFZA 1KQSO 1VQ5P 2Z46A 2FADA 2DNWA 1VQKP 1CEIA 4H2YC 3CCQP 2GZEA 5F2OA 2FACA 5EW5E 1KC8Q 2N98A 3G0VA 2K0XA 2M5RA 2OTJP 3G1IA 1M1KQ 3CCLP 1QVGO 2JAZA 3DPHA 1IUQA 5F2NA
chains in the Genus database with same CATH topology
2FVEA 2AVAA 1VKUA 1L0IA 4R0MA 2K93A 3LMOA 2N6ZA 2JU1A 2EHSA 2KOQA 2KG6A 2KGDA 2GDXA 3GZMA 2KOSA 2MVVA 2FVFA 1DNYA 3RG2A 4IZ6A 1HY8A 2LOLA 2KGEA 3GZLA 1L0HA 1AF8A 2VSQA 2KOPA 2KGAA 2KOOA 2FQ1A 2KWLA 2MR7A 1F80D 3EJEA 4NEOA 2FQ0A 2PNGA 3EJDA 2MY5A 2CGQA 2FHSC 2N50A 2L4BA 2MF4A 4BPFA 4H2WC 4BPGA 2K2QA 2FVAA 2LTEA 2N6YA 4MRTC 2JQ4A 2QNWA 2CQ8A 2CG5B 2KGCA 2CNRA 4CA3A 2JU2A 2ROQA 2LMLA 2MR8A 2GDWA 2K94A 5CZDB 2JGPA 2LL8A 2AFEA 2AF8A 2AFDA 2KR5A 2L9FA 1HQBA 2K0YA 4HKGA 2L0QA 2FQ2A 2X2BA 4BPHA 1OR5A 2KORA 2EHTA 1NQ4A 4PWVB 3EJBA 5EJDA 2LKIA 5KP7B 1ACPA 1X3OA 2MVUA 2KW2A 2LIWA 2FADA 2KG9A 2N5HA 5HV8A 5KP8B 2DNWA 4H2XC 2KG8A 2N5IA 2XZ0D 4H2YC 4DG9A 1KLPA 2GDYA 2K92A 3CE7A 2FACA 2XZ1C 2L22A 4PXHB 2MD9A 1T8KA 2N98A 1DV5A 2K0XA 2M5RA 2LPKA 2FAEA 2LIUA 5HVCA 3NY7B 5KP6B
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2FVE A;  2AVA A;  1VKU A;  1L0I A;  4R0M A;  2K93 A;  3LMO A;  2N6Z A;  2JU1 A;  2EHS A;  2KOQ A;  2KG6 A;  2KGD A;  2GDX A;  3GZM A;  2KOS A;  2MVV A;  2FVF A;  1DNY A;  3RG2 A;  4IZ6 A;  1HY8 A;  2LOL A;  2KGE A;  3GZL A;  1L0H A;  1AF8 A;  2VSQ A;  2KOP A;  2KGA A;  2KOO A;  2FQ1 A;  2KWL A;  2MR7 A;  1F80 D;  3EJE A;  4NEO A;  2FQ0 A;  2PNG A;  3EJD A;  2MY5 A;  2CGQ A;  2FHS C;  2N50 A;  2L4B A;  2MF4 A;  4BPF A;  4H2W C;  4BPG A;  2K2Q A;  2FVA A;  2LTE A;  2N6Y A;  4MRT C;  2JQ4 A;  2QNW A;  2CQ8 A;  2CG5 B;  2KGC A;  2CNR A;  4CA3 A;  2JU2 A;  2ROQ A;  2LML A;  2MR8 A;  2GDW A;  2K94 A;  5CZD B;  2JGP A;  2LL8 A;  2AFE A;  2AF8 A;  2AFD A;  2KR5 A;  2L9F A;  1HQB A;  2K0Y A;  4HKG A;  2L0Q A;  2FQ2 A;  2X2B A;  4BPH A;  1OR5 A;  2KOR A;  2EHT A;  1NQ4 A;  4PWV B;  3EJB A;  5EJD A;  2LKI A;  5KP7 B;  1ACP A;  1X3O A;  2MVU A;  2KW2 A;  2LIW A;  2FAD A;  2KG9 A;  2N5H A;  5HV8 A;  5KP8 B;  2DNW A;  4H2X C;  2KG8 A;  2N5I A;  2XZ0 D;  4H2Y C;  4DG9 A;  1KLP A;  2GDY A;  2K92 A;  3CE7 A;  2FAC A;  2XZ1 C;  2L22 A;  4PXH B;  2MD9 A;  1T8K A;  2N98 A;  1DV5 A;  2K0X A;  2M5R A;  2LPK A;  2FAE A;  2LIU A;  5HVC A;  3NY7 B;  5KP6 B; 
#chains in the Genus database with same CATH topology
 3M1M A;  3CD6 P;  4U0F A;  2WPT A;  1IMQ A;  1K30 A;  1VQL P;  1BAJ A;  2EG5 A;  2M8N A;  2KOQ A;  3B5I A;  3OW2 O;  2GDX A;  3GZM A;  1ZMB A;  2KOS A;  3CCE P;  1KD1 Q;  1D1D A;  4COC A;  2EFJ A;  2EIA A;  1Q82 Q;  2KGE A;  1AF8 A;  1Q86 Q;  2VSQ A;  3CCM P;  2XXM A;  1F80 D;  3DS2 A;  2MY5 A;  4F37 A;  2MF4 A;  3LRY A;  3H47 A;  1VQ4 P;  4MRT C;  2QA4 P;  2VLQ A;  3E2D A;  2JU2 A;  2ROQ A;  2LML A;  2LL8 A;  2AFE A;  2DGY A;  2AFD A;  3DS3 A;  4PH1 A;  1YHQ P;  3MGE A;  2FQ2 A;  1OR5 A;  2KOR A;  2XV6 A;  2Z44 A;  3G1G A;  5KP7 B;  2K5X A;  2KW2 A;  3DS4 A;  1E6J P;  4U0D A;  5KP8 B;  4H2X C;  4DG9 A;  2GDY A;  3CCS P;  2K92 A;  1RNI A;  2JYL A;  2ONT A;  2XZ1 C;  2L22 A;  2K0D X;  2PEJ A;  3CCU P;  2GZI A;  1T8K A;  2L6E A;  2LPK A;  1VQP P;  3CPW O;  2JYG A;  4QNB A;  5HVC A;  5JPA A;  3NY7 B;  2GYK A;  5KP6 B;  2FVE A;  1GXH A;  1QRJ A;  1VQ9 P;  2K93 A;  3I55 P;  3WBH A;  2N6Z A;  4IPY A;  2JB0 A;  2JU1 A;  3CME P;  1YIT P;  2VLN A;  2FVF A;  4XRQ A;  1DNY A;  1M90 Q;  3RG2 A;  4IZ6 A;  2GZG A;  2LOL A;  3DTJ A;  2OTL P;  5DCK A;  2E1M A;  1L0H A;  2KGA A;  2FQ1 A;  3CC4 P;  2KWL A;  1Q7Y Q;  3EJE A;  5HGO A;  2CWO A;  2PY8 A;  2FQ0 A;  1UNK A;  3EJD A;  5HGN A;  2FHS C;  3DS5 A;  2N50 A;  2L4B A;  4U0E A;  4COP A;  4BPF A;  2PEM A;  2M8P A;  2PEQ A;  2JQ4 A;  1W2B O;  2JBG A;  2QNW A;  3VRL C;  2KOD A;  4GR6 A;  1BXI A;  1QVF O;  2MR8 A;  3P05 A;  2K94 A;  1K9M Q;  2JGP A;  1UJZ A;  2KR5 A;  2L9F A;  2K0Y A;  2L0Q A;  4BPH A;  1RO2 A;  1VQO P;  1K8A Q;  1VQN P;  5EJD A;  3EJB A;  2LKI A;  3HYB A;  4U0B A;  2PEN A;  3G26 A;  1E0H A;  2KG9 A;  2N5H A;  2M8L A;  1RO0 A;  1KLP A;  2VLP A;  2OAR A;  3H4E A;  3CE7 A;  2JO0 A;  4PXH B;  1VQ8 P;  5F2K A;  2Z45 A;  1DV5 A;  3G29 A;  3RG6 C;  2LIU A;  1VQ6 P;  5HGL A;  1VKU A;  1A8O A;  3LMO A;  2KG6 A;  1A43 A;  2MVV A;  1NJI Q;  1M6E X;  1HY8 A;  3GZL A;  1AYI A;  2KOO A;  1YJW P;  1AUM A;  3DS0 A;  5I4T G;  4NEO A;  1Z6M A;  1EOQ A;  2CGQ A;  4XFY A;  4H2W C;  2FVA A;  2LTE A;  2N6Y A;  1GPJ A;  3Q20 A;  2XT1 A;  2CQ8 A;  2CG5 B;  5BS2 A;  1JJ2 O;  7CEI A;  3NTE A;  3CMA P;  3B4Q A;  5CZD B;  3G4S P;  2BHV A;  3I56 P;  3G71 P;  1HQB A;  2X2B A;  4PWV B;  2BUO A;  1ACP A;  1X3O A;  5HGM A;  2MVU A;  2LIW A;  2LF4 A;  5HV8 A;  1YJN P;  2GZF A;  2KG8 A;  2N5I A;  2XZ0 D;  3CC7 P;  1YI2 P;  3G28 A;  1YIJ P;  2PEK A;  4QKO A;  4PH0 A;  3G21 A;  4GR2 A;  2MD9 A;  4UHP B;  2FAE A;  3GKL C;  2GZJ A;  1Q81 Q;  3DS1 A;  2AVA A;  1L0I A;  4R0M A;  3CXC O;  1ZNV A;  1IMP A;  2EHS A;  4U0C A;  2KGD A;  3G6E P;  2P9X A;  3CCR P;  3CC2 P;  2VLO A;  1N8R Q;  4XRO A;  5BS1 A;  1M6N A;  3CCJ P;  3HZQ A;  2KOP A;  1S72 P;  1GXG A;  4U0A A;  2MR7 A;  2PEO A;  3CCV P;  1MZ8 A;  2PNG A;  4XFX A;  4BPG A;  2ERH A;  2K2Q A;  2QEX P;  1K73 Q;  1FR2 A;  2NO8 A;  2KGC A;  2CNR A;  3GJN A;  4CA3 A;  3U43 A;  4M0I A;  2GDW A;  2AF8 A;  4HKG A;  1VHN A;  4WYM A;  1EMV A;  1M74 A;  1EIA A;  2PEI A;  1VQM P;  1YJ9 P;  2EHT A;  1NQ4 A;  3H0D A;  1VQ7 P;  4XFZ A;  1KQS O;  1VQ5 P;  2Z46 A;  2FAD A;  2DNW A;  1VQK P;  1CEI A;  4H2Y C;  3CCQ P;  2GZE A;  5F2O A;  2FAC A;  5EW5 E;  1KC8 Q;  2N98 A;  3G0V A;  2K0X A;  2M5R A;  2OTJ P;  3G1I A;  1M1K Q;  3CCL P;  1QVG O;  2JAZ A;  3DPH A;  1IUQ A;  5F2N A; 
#chains in the Genus database with same CATH homology
 2FVE A;  2AVA A;  1VKU A;  1L0I A;  4R0M A;  2K93 A;  3LMO A;  2N6Z A;  2JU1 A;  2EHS A;  2KOQ A;  2KG6 A;  2KGD A;  2GDX A;  3GZM A;  2KOS A;  2MVV A;  2FVF A;  1DNY A;  3RG2 A;  4IZ6 A;  1HY8 A;  2LOL A;  2KGE A;  3GZL A;  1L0H A;  1AF8 A;  2VSQ A;  2KOP A;  2KGA A;  2KOO A;  2FQ1 A;  2KWL A;  2MR7 A;  1F80 D;  3EJE A;  4NEO A;  2FQ0 A;  2PNG A;  3EJD A;  2MY5 A;  2CGQ A;  2FHS C;  2N50 A;  2L4B A;  2MF4 A;  4BPF A;  4H2W C;  4BPG A;  2K2Q A;  2FVA A;  2LTE A;  2N6Y A;  4MRT C;  2JQ4 A;  2QNW A;  2CQ8 A;  2CG5 B;  2KGC A;  2CNR A;  4CA3 A;  2JU2 A;  2ROQ A;  2LML A;  2MR8 A;  2GDW A;  2K94 A;  5CZD B;  2JGP A;  2LL8 A;  2AFE A;  2AF8 A;  2AFD A;  2KR5 A;  2L9F A;  1HQB A;  2K0Y A;  4HKG A;  2L0Q A;  2FQ2 A;  2X2B A;  4BPH A;  1OR5 A;  2KOR A;  2EHT A;  1NQ4 A;  4PWV B;  3EJB A;  5EJD A;  2LKI A;  5KP7 B;  1ACP A;  1X3O A;  2MVU A;  2KW2 A;  2LIW A;  2FAD A;  2KG9 A;  2N5H A;  5HV8 A;  5KP8 B;  2DNW A;  4H2X C;  2KG8 A;  2N5I A;  2XZ0 D;  4H2Y C;  4DG9 A;  1KLP A;  2GDY A;  2K92 A;  3CE7 A;  2FAC A;  2XZ1 C;  2L22 A;  4PXH B;  2MD9 A;  1T8K A;  2N98 A;  1DV5 A;  2K0X A;  2M5R A;  2LPK A;  2FAE A;  2LIU A;  5HVC A;  3NY7 B;  5KP6 B; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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