1AF8A

Actinorhodin polyketide synthase acyl carrier protein from streptomyces coelicolor a3(2), nmr, 24 structures
Total Genus 16
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
16
sequence length
86
structure length
86
Chain Sequence
b'MATLLTTDDLRRALVECAGETDGTDLSGDFLDLRFEDIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLINGALAEAA'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords ACTINORHODIN POLYKETIDE SYNTHASE ACYL CARRIER PROTEIN
publication title Solution structure of the actinorhodin polyketide synthase acyl carrier protein from Streptomyces coelicolor A3(2).
pubmed doi rcsb
source organism Streptomyces coelicolor
molecule tags Antibiotic biosynthesis
total genus 16
structure length 86
sequence length 86
ec nomenclature
pdb deposition date 1997-03-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 1af8A00
2LIWA 5KP6B 1ACPA 4H2XC 2N6YA 1VKUA 2KGAA 2KGDA 2M5RA 2N98A 2LL8A 4H2YC 2DNWA 2N5HA 4IZ6A 1NQ4A 2KW2A 4MRTC 3CE7A 5HV8A 2FHSC 2PNGA 1AF8A 4CA3A 2K0XA 2K92A 1KLPA 4PWVB 3EJDA 2KG9A 1DNYA 2KGEA 2LIUA 1F80D 2KOOA 2LPKA 2ROQA 2FVAA 2K94A 4BPHA 2FQ1A 2QNWA 1HQBA 4NEOA 2MR7A 2JU1A 2N6ZA 2MVVA 2MVUA 5KP7B 2CQ8A 2XZ0D 2FQ2A 4PXHB 2CNRA 2CGQA 2JGPA 2KOSA 4HKGA 1OR5A 4BPGA 2LMLA 2FADA 2MF4A 2GDWA 2KG8A 2KORA 4H2WC 2MY5A 2L4BA 2FQ0A 2KR5A 5CZDB 2K93A 2JU2A 2X2BA 2LKIA 3NY7B 1HY8A 1X3OA 2FAEA 2LOLA 2KGCA 2MD9A 2N5IA 2L9FA 2K0YA 1DV5A 2XZ1C 2KWLA 2KOQA 2KOPA 5HVCA 2AVAA 4BPFA 2CG5B 2GDXA 4DG9A 2MR8A 3EJEA 1L0IA 2KG6A 2EHTA 3GZLA 2JQ4A 3RG2A 3LMOA 2FVFA 2FACA 2K2QA 2L0QA 2AF8A 2VSQA 2L22A 5EJDA 3EJBA 1T8KA 2AFDA 5KP8B 2AFEA 2N50A 1L0HA 2GDYA 2FVEA 2EHSA 4R0MA 3GZMA 2LTEA
chains in the Genus database with same CATH superfamily
1M6NA 2GZEA 1VKUA 5F2KA 2KGDA 2ERHA 2N98A 2LL8A 1VQKP 1NQ4A 2PNGA 1AF8A 4U0EA 2WPTA 2K0XA 2K92A 1NJIQ 1KLPA 1DNYA 3CCJP 2ROQA 4BPHA 1YITP 2Z46A 2JU1A 2XZ0D 1YHQP 3CC7P 3CD6P 4PXHB 1CEIA 4HKGA 4XFXA 3G71P 2Z44A 2QEXP 2E1MA 2L6EA 3HZQA 2GDWA 2MY5A 2EIAA 1VQ6P 2VLPA 2GYKA 2X2BA 2BHVA 4XFZA 3CPWO 2GZJA 2L9FA 3G28A 3DPHA 2KWLA 3CCMP 5HVCA 2JYGA 5F2NA 3G29A 2AVAA 4QKOA 1RNIA 1K9MQ 3GJNA 1VQMP 2MR8A 1L0IA 2M8PA 3I56P 3GZLA 2JQ4A 1W2BO 3LMOA 2FVFA 2K2QA 3CCEP 5BS2A 2LF4A 5EJDA 1VQNP 3DS1A 3DS5A 4GR6A 3EJBA 1KC8Q 3CMEP 4U0DA 1Q7YQ 1YJ9P 3B4QA 2LTEA 5KP6B 1ACPA 2BUOA 4GR2A 1YJWP 1RO2A 2DNWA 1RO0A 2N5HA 1Q82Q 2GZGA 4MRTC 4M0IA 3CE7A 4F37A 2OARA 5HV8A 1Q86Q 1Z6MA 2JO0A 4PWVB 3EJDA 2KG9A 2KOOA 1VQ9P 2FQ1A 1M6EX 3G6EP 2N6ZA 1D1DA 2MVVA 5DCKA 1MZ8A 3OW2O 2CGQA 2JGPA 2KOSA 1OR5A 1M74A 1YI2P 2MF4A 1VQ7P 2PEJA 2XXMA 4IPYA 2L4BA 2FQ0A 2KR5A 2OTLP 2P9XA 5HGLA 1VHNA 3CC4P 2OTJP 2DGYA 3NY7B 2K0DX 2FAEA 1A43A 5HGOA 2KOQA 2M8NA 3E2DA 2JB0A 2CG5B 4COCA 2EHTA 1VQPP 2PEMA 5I4TG 1ZNVA 1VQOP 2FACA 2PEQA 2VSQA 2L22A 4PH0A 1VQ5P 1T8KA 2EFJA 3HYBA 3LRYA 2N50A 1L0HA 3Q20A 3G4SP 2FVEA 2EHSA 4XROA 2N6YA 3CCSP 2M5RA 2XV6A 5BS1A 1UNKA 4CA3A 5F2OA 2JYLA 4XRQA 2XT1A 3G26A 2K5XA 2KGEA 1F80D 1YIJP 2LPKA 1S72P 2K94A 2QNWA 1HQBA 2MR7A 3CCLP 5KP7B 1EOQA 2FQ2A 3M1MA 3CC2P 2VLNA 1E0HA 3MGEA 2CWOA 2PEKA 4BPGA 3CCUP 3DS2A 3G1IA 2FADA 3CCRP 2PEIA 1IMPA 3DS4A 4H2WC 1FR2A 2KODA 2Z45A 5CZDB 2JU2A 2LKIA 3H0DA 2LOLA 1ZMBA 2KGCA 2MD9A 2N5IA 3DS3A 2XZ1C 3RG6C 3CCQP 3H4EA 1GXHA 1JJ2O 3DTJA 4U0BA 2GDXA 4DG9A 1BAJA 3EJEA 1M90Q 3RG2A 3U43A 3P05A 1YJNP 1VQ4P 2AF8A 1QVGO 2GZFA 4U0FA 5KP8B 2AFEA 2GDYA 2JAZA 3WBHA 1GPJA 1VQ8P 2LIWA 1K8AQ 2GZIA 4H2XC 4WYMA 2KGAA 5JPAA 1A8OA 4H2YC 1KD1Q 3G0VA 4IZ6A 7CEIA 2KW2A 1IMQA 4PH1A 2FHSC 2PENA 4UHPB 4U0CA 2LIUA 1EIAA 2FVAA 1BXIA 3G21A 2QA4P 4NEOA 2VLOA 3B5IA 1VQLP 1AYIA 2MVUA 2PEOA 2CQ8A 3DS0A 2PY8A 2CNRA 4U0AA 5EW5E 1UJZA 2VLQA 2LMLA 1K73Q 2KG8A 2KORA 3NTEA 1QRJA 1E6JP 3CXCO 2EG5A 2K93A 1Q81Q 1HY8A 1X3OA 2K0YA 1DV5A 3GKLC 4QNBA 1GXGA 1IUQA 1M1KQ 2KOPA 5HGMA 3VRLC 4BPFA 4COPA 2KG6A 1N8RQ 2ONTA 3G1GA 2NO8A 1AUMA 3I55P 2L0QA 3CCVP 1K30A 4XFYA 1EMVA 3CMAP 2AFDA 5HGNA 2JBGA 3H47A 2M8LA 1QVFO 1KQSO 4R0MA 3GZMA
chains in the Genus database with same CATH topology
2LIWA 5KP6B 1ACPA 4H2XC 2N6YA 1VKUA 2KGAA 2KGDA 2M5RA 2N98A 2LL8A 4H2YC 2DNWA 2N5HA 4IZ6A 1NQ4A 2KW2A 4MRTC 3CE7A 5HV8A 2FHSC 2PNGA 1AF8A 4CA3A 2K0XA 2K92A 1KLPA 4PWVB 3EJDA 2KG9A 1DNYA 2KGEA 2LIUA 1F80D 2KOOA 2LPKA 2ROQA 2FVAA 2K94A 4BPHA 2FQ1A 2QNWA 1HQBA 4NEOA 2MR7A 2JU1A 2N6ZA 2MVVA 2MVUA 5KP7B 2CQ8A 2XZ0D 2FQ2A 4PXHB 2CNRA 2CGQA 2JGPA 2KOSA 4HKGA 1OR5A 4BPGA 2LMLA 2FADA 2MF4A 2GDWA 2KG8A 2KORA 4H2WC 2MY5A 2L4BA 2FQ0A 2KR5A 5CZDB 2K93A 2JU2A 2X2BA 2LKIA 3NY7B 1HY8A 1X3OA 2FAEA 2LOLA 2KGCA 2MD9A 2N5IA 2L9FA 2K0YA 1DV5A 2XZ1C 2KWLA 2KOQA 2KOPA 5HVCA 2AVAA 4BPFA 2CG5B 2GDXA 4DG9A 2MR8A 3EJEA 1L0IA 2KG6A 2EHTA 3GZLA 2JQ4A 3RG2A 3LMOA 2FVFA 2FACA 2K2QA 2L0QA 2AF8A 2VSQA 2L22A 5EJDA 3EJBA 1T8KA 2AFDA 5KP8B 2AFEA 2N50A 1L0HA 2GDYA 2FVEA 2EHSA 4R0MA 3GZMA 2LTEA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2LIW A;  5KP6 B;  1ACP A;  4H2X C;  2N6Y A;  1VKU A;  2KGA A;  2KGD A;  2M5R A;  2N98 A;  2LL8 A;  4H2Y C;  2DNW A;  2N5H A;  4IZ6 A;  1NQ4 A;  2KW2 A;  4MRT C;  3CE7 A;  5HV8 A;  2FHS C;  2PNG A;  1AF8 A;  4CA3 A;  2K0X A;  2K92 A;  1KLP A;  4PWV B;  3EJD A;  2KG9 A;  1DNY A;  2KGE A;  2LIU A;  1F80 D;  2KOO A;  2LPK A;  2ROQ A;  2FVA A;  2K94 A;  4BPH A;  2FQ1 A;  2QNW A;  1HQB A;  4NEO A;  2MR7 A;  2JU1 A;  2N6Z A;  2MVV A;  2MVU A;  5KP7 B;  2CQ8 A;  2XZ0 D;  2FQ2 A;  4PXH B;  2CNR A;  2CGQ A;  2JGP A;  2KOS A;  4HKG A;  1OR5 A;  4BPG A;  2LML A;  2FAD A;  2MF4 A;  2GDW A;  2KG8 A;  2KOR A;  4H2W C;  2MY5 A;  2L4B A;  2FQ0 A;  2KR5 A;  5CZD B;  2K93 A;  2JU2 A;  2X2B A;  2LKI A;  3NY7 B;  1HY8 A;  1X3O A;  2FAE A;  2LOL A;  2KGC A;  2MD9 A;  2N5I A;  2L9F A;  2K0Y A;  1DV5 A;  2XZ1 C;  2KWL A;  2KOQ A;  2KOP A;  5HVC A;  2AVA A;  4BPF A;  2CG5 B;  2GDX A;  4DG9 A;  2MR8 A;  3EJE A;  1L0I A;  2KG6 A;  2EHT A;  3GZL A;  2JQ4 A;  3RG2 A;  3LMO A;  2FVF A;  2FAC A;  2K2Q A;  2L0Q A;  2AF8 A;  2VSQ A;  2L22 A;  5EJD A;  3EJB A;  1T8K A;  2AFD A;  5KP8 B;  2AFE A;  2N50 A;  1L0H A;  2GDY A;  2FVE A;  2EHS A;  4R0M A;  3GZM A;  2LTE A; 
#chains in the Genus database with same CATH topology
 1M6N A;  2GZE A;  1VKU A;  5F2K A;  2KGD A;  2ERH A;  2N98 A;  2LL8 A;  1VQK P;  1NQ4 A;  2PNG A;  1AF8 A;  4U0E A;  2WPT A;  2K0X A;  2K92 A;  1NJI Q;  1KLP A;  1DNY A;  3CCJ P;  2ROQ A;  4BPH A;  1YIT P;  2Z46 A;  2JU1 A;  2XZ0 D;  1YHQ P;  3CC7 P;  3CD6 P;  4PXH B;  1CEI A;  4HKG A;  4XFX A;  3G71 P;  2Z44 A;  2QEX P;  2E1M A;  2L6E A;  3HZQ A;  2GDW A;  2MY5 A;  2EIA A;  1VQ6 P;  2VLP A;  2GYK A;  2X2B A;  2BHV A;  4XFZ A;  3CPW O;  2GZJ A;  2L9F A;  3G28 A;  3DPH A;  2KWL A;  3CCM P;  5HVC A;  2JYG A;  5F2N A;  3G29 A;  2AVA A;  4QKO A;  1RNI A;  1K9M Q;  3GJN A;  1VQM P;  2MR8 A;  1L0I A;  2M8P A;  3I56 P;  3GZL A;  2JQ4 A;  1W2B O;  3LMO A;  2FVF A;  2K2Q A;  3CCE P;  5BS2 A;  2LF4 A;  5EJD A;  1VQN P;  3DS1 A;  3DS5 A;  4GR6 A;  3EJB A;  1KC8 Q;  3CME P;  4U0D A;  1Q7Y Q;  1YJ9 P;  3B4Q A;  2LTE A;  5KP6 B;  1ACP A;  2BUO A;  4GR2 A;  1YJW P;  1RO2 A;  2DNW A;  1RO0 A;  2N5H A;  1Q82 Q;  2GZG A;  4MRT C;  4M0I A;  3CE7 A;  4F37 A;  2OAR A;  5HV8 A;  1Q86 Q;  1Z6M A;  2JO0 A;  4PWV B;  3EJD A;  2KG9 A;  2KOO A;  1VQ9 P;  2FQ1 A;  1M6E X;  3G6E P;  2N6Z A;  1D1D A;  2MVV A;  5DCK A;  1MZ8 A;  3OW2 O;  2CGQ A;  2JGP A;  2KOS A;  1OR5 A;  1M74 A;  1YI2 P;  2MF4 A;  1VQ7 P;  2PEJ A;  2XXM A;  4IPY A;  2L4B A;  2FQ0 A;  2KR5 A;  2OTL P;  2P9X A;  5HGL A;  1VHN A;  3CC4 P;  2OTJ P;  2DGY A;  3NY7 B;  2K0D X;  2FAE A;  1A43 A;  5HGO A;  2KOQ A;  2M8N A;  3E2D A;  2JB0 A;  2CG5 B;  4COC A;  2EHT A;  1VQP P;  2PEM A;  5I4T G;  1ZNV A;  1VQO P;  2FAC A;  2PEQ A;  2VSQ A;  2L22 A;  4PH0 A;  1VQ5 P;  1T8K A;  2EFJ A;  3HYB A;  3LRY A;  2N50 A;  1L0H A;  3Q20 A;  3G4S P;  2FVE A;  2EHS A;  4XRO A;  2N6Y A;  3CCS P;  2M5R A;  2XV6 A;  5BS1 A;  1UNK A;  4CA3 A;  5F2O A;  2JYL A;  4XRQ A;  2XT1 A;  3G26 A;  2K5X A;  2KGE A;  1F80 D;  1YIJ P;  2LPK A;  1S72 P;  2K94 A;  2QNW A;  1HQB A;  2MR7 A;  3CCL P;  5KP7 B;  1EOQ A;  2FQ2 A;  3M1M A;  3CC2 P;  2VLN A;  1E0H A;  3MGE A;  2CWO A;  2PEK A;  4BPG A;  3CCU P;  3DS2 A;  3G1I A;  2FAD A;  3CCR P;  2PEI A;  1IMP A;  3DS4 A;  4H2W C;  1FR2 A;  2KOD A;  2Z45 A;  5CZD B;  2JU2 A;  2LKI A;  3H0D A;  2LOL A;  1ZMB A;  2KGC A;  2MD9 A;  2N5I A;  3DS3 A;  2XZ1 C;  3RG6 C;  3CCQ P;  3H4E A;  1GXH A;  1JJ2 O;  3DTJ A;  4U0B A;  2GDX A;  4DG9 A;  1BAJ A;  3EJE A;  1M90 Q;  3RG2 A;  3U43 A;  3P05 A;  1YJN P;  1VQ4 P;  2AF8 A;  1QVG O;  2GZF A;  4U0F A;  5KP8 B;  2AFE A;  2GDY A;  2JAZ A;  3WBH A;  1GPJ A;  1VQ8 P;  2LIW A;  1K8A Q;  2GZI A;  4H2X C;  4WYM A;  2KGA A;  5JPA A;  1A8O A;  4H2Y C;  1KD1 Q;  3G0V A;  4IZ6 A;  7CEI A;  2KW2 A;  1IMQ A;  4PH1 A;  2FHS C;  2PEN A;  4UHP B;  4U0C A;  2LIU A;  1EIA A;  2FVA A;  1BXI A;  3G21 A;  2QA4 P;  4NEO A;  2VLO A;  3B5I A;  1VQL P;  1AYI A;  2MVU A;  2PEO A;  2CQ8 A;  3DS0 A;  2PY8 A;  2CNR A;  4U0A A;  5EW5 E;  1UJZ A;  2VLQ A;  2LML A;  1K73 Q;  2KG8 A;  2KOR A;  3NTE A;  1QRJ A;  1E6J P;  3CXC O;  2EG5 A;  2K93 A;  1Q81 Q;  1HY8 A;  1X3O A;  2K0Y A;  1DV5 A;  3GKL C;  4QNB A;  1GXG A;  1IUQ A;  1M1K Q;  2KOP A;  5HGM A;  3VRL C;  4BPF A;  4COP A;  2KG6 A;  1N8R Q;  2ONT A;  3G1G A;  2NO8 A;  1AUM A;  3I55 P;  2L0Q A;  3CCV P;  1K30 A;  4XFY A;  1EMV A;  3CMA P;  2AFD A;  5HGN A;  2JBG A;  3H47 A;  2M8L A;  1QVF O;  1KQS O;  4R0M A;  3GZM A; 
#chains in the Genus database with same CATH homology
 2LIW A;  5KP6 B;  1ACP A;  4H2X C;  2N6Y A;  1VKU A;  2KGA A;  2KGD A;  2M5R A;  2N98 A;  2LL8 A;  4H2Y C;  2DNW A;  2N5H A;  4IZ6 A;  1NQ4 A;  2KW2 A;  4MRT C;  3CE7 A;  5HV8 A;  2FHS C;  2PNG A;  1AF8 A;  4CA3 A;  2K0X A;  2K92 A;  1KLP A;  4PWV B;  3EJD A;  2KG9 A;  1DNY A;  2KGE A;  2LIU A;  1F80 D;  2KOO A;  2LPK A;  2ROQ A;  2FVA A;  2K94 A;  4BPH A;  2FQ1 A;  2QNW A;  1HQB A;  4NEO A;  2MR7 A;  2JU1 A;  2N6Z A;  2MVV A;  2MVU A;  5KP7 B;  2CQ8 A;  2XZ0 D;  2FQ2 A;  4PXH B;  2CNR A;  2CGQ A;  2JGP A;  2KOS A;  4HKG A;  1OR5 A;  4BPG A;  2LML A;  2FAD A;  2MF4 A;  2GDW A;  2KG8 A;  2KOR A;  4H2W C;  2MY5 A;  2L4B A;  2FQ0 A;  2KR5 A;  5CZD B;  2K93 A;  2JU2 A;  2X2B A;  2LKI A;  3NY7 B;  1HY8 A;  1X3O A;  2FAE A;  2LOL A;  2KGC A;  2MD9 A;  2N5I A;  2L9F A;  2K0Y A;  1DV5 A;  2XZ1 C;  2KWL A;  2KOQ A;  2KOP A;  5HVC A;  2AVA A;  4BPF A;  2CG5 B;  2GDX A;  4DG9 A;  2MR8 A;  3EJE A;  1L0I A;  2KG6 A;  2EHT A;  3GZL A;  2JQ4 A;  3RG2 A;  3LMO A;  2FVF A;  2FAC A;  2K2Q A;  2L0Q A;  2AF8 A;  2VSQ A;  2L22 A;  5EJD A;  3EJB A;  1T8K A;  2AFD A;  5KP8 B;  2AFE A;  2N50 A;  1L0H A;  2GDY A;  2FVE A;  2EHS A;  4R0M A;  3GZM A;  2LTE A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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