1AF8A

Actinorhodin polyketide synthase acyl carrier protein from streptomyces coelicolor a3(2), nmr, 24 structures
Total Genus 16
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
16
sequence length
86
structure length
86
Chain Sequence
MATLLTTDDLRRALVECAGETDGTDLSGDFLDLRFEDIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLINGALAEAA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Antibiotic biosynthesis
molecule keywords ACTINORHODIN POLYKETIDE SYNTHASE ACYL CARRIER PROTEIN
publication title Solution structure of the actinorhodin polyketide synthase acyl carrier protein from Streptomyces coelicolor A3(2).
pubmed doi rcsb
source organism Streptomyces coelicolor
total genus 16
structure length 86
sequence length 86
ec nomenclature
pdb deposition date 1997-03-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 1af8A00
2KOPA 2LMLA 5CZDB 2MF4A 1OR5A 5HV8A 2XZ0D 4DG9A 1ACPA 2EHTA 2FQ1A 2N5IA 2K0XA 4NEOA 1NQ4A 2LOLA 1HY8A 4BPGA 1DNYA 2LL8A 2FADA 2LIWA 2N6YA 2AFDA 2KORA 3EJBA 2CGQA 2MD9A 2VSQA 1DV5A 2L9FA 2K94A 2FHSC 2LIUA 2JQ4A 2FVAA 2XZ1C 2N6ZA 2KR5A 2LTEA 2N5HA 2KGAA 2LPKA 2AFEA 2FQ0A 2KGCA 2PNGA 2FAEA 3GZMA 3EJDA 2QNWA 2K92A 5KP6B 4PWVB 5HVCA 2KOSA 1T8KA 2KG8A 4PXHB 3GZLA 2AVAA 1KLPA 2DNWA 2MVUA 2GDYA 2CQ8A 3NY7B 4IZ6A 4H2XC 2L22A 1VKUA 1L0IA 2MR7A 4H2WC 4CA3A 1X3OA 3EJEA 2FVFA 2GDWA 1HQBA 2KG9A 2GDXA 3CE7A 2FQ2A 2FACA 4MRTC 2N50A 4R0MA 2K93A 2JGPA 3RG2A 5KP8B 2KGEA 2M5RA 2JU1A 2AF8A 2LKIA 3LMOA 2K2QA 2MR8A 5KP7B 2KOQA 2EHSA 4HKGA 2KW2A 5EJDA 2CG5B 2KOOA 1L0HA 2X2BA 2K0YA 2N98A 2KGDA 1F80D 2KWLA 2L4BA 2KG6A 2JU2A 2L0QA 2ROQA 4H2YC 2CNRA 2FVEA 1AF8A 2MVVA 4BPHA 2MY5A 4BPFA
chains in the Genus database with same CATH superfamily
1M1KQ 2KOPA 1YITP 2LMLA 2BHVA 5HGOA 4U0CA 1JJ2O 3DS0A 1Z6MA 3OW2O 2XZ0D 4DG9A 2LF4A 2EHTA 2PENA 1QVFO 2PY8A 2N5IA 3DTJA 1NQ4A 2VLPA 2EFJA 2QEXP 2GZFA 2LIWA 1E0HA 3EJBA 2OTLP 7CEIA 2VSQA 2K94A 2PEKA 2PEOA 2ONTA 1NJIQ 2LPKA 2AFEA 2KGCA 1CEIA 2CWOA 2XXMA 1UNKA 2PEMA 2JB0A 5KP6B 2XV6A 1RO2A 1E6JP 2Z45A 1W2BO 3G21A 1K73Q 3GKLC 2GDYA 2CQ8A 4H2XC 2JYGA 2MR7A 3M1MA 1X3OA 1VQOP 3G1IA 1IMQA 1HQBA 1VQ8P 2GDXA 3CE7A 3CMEP 1QVGO 4U0BA 1YJ9P 2K93A 4UHPB 2M5RA 1IUQA 1ZMBA 2CG5B 2KOOA 3CCLP 3B5IA 3CCVP 2ERHA 2KWLA 2K5XA 2WPTA 4U0EA 4H2YC 3G28A 3NTEA 1AF8A 2MY5A 4BPFA 2JBGA 2MF4A 1KD1Q 2OTJP 2E1MA 5HGNA 2OARA 1A43A 1YIJP 1UJZA 1VQ5P 1EOQA 3VRLC 4XFZA 3G0VA 2M8PA 2GZEA 2Z46A 1HY8A 1DNYA 2LL8A 3HYBA 3CPWO 2JYLA 2AFDA 2KORA 2PEQA 3U43A 2XZ1C 3H47A 2N6ZA 2KR5A 2LTEA 1Q82Q 4F37A 1VHNA 3DS2A 4XFXA 2FQ0A 2FAEA 3GZMA 3CCUP 3G1GA 2K92A 3CCEP 1VQMP 5HVCA 3DPHA 1MZ8A 3H0DA 1T8KA 2KG8A 1M6EX 2AVAA 4IPYA 3G6EP 2PEIA 4QKOA 1EIAA 3NY7B 1FR2A 2L22A 4U0AA 1VQ6P 1L0IA 4CA3A 1AYIA 3EJEA 4WYMA 2KG9A 2K0DX 1KQSO 2FACA 4MRTC 3CCSP 3I56P 2GYKA 3DS1A 2QA4P 1VQ7P 2L6EA 2JAZA 4XFYA 1VQKP 1D1DA 1F80D 2KG6A 2ROQA 3WBHA 2FVEA 3GJNA 4COCA 1N8RQ 5CZDB 5HV8A 1ACPA 2FQ1A 3DS3A 4XROA 3H4EA 2LOLA 4GR6A 5BS2A 4BPGA 2FADA 4COPA 2GZIA 3G29A 2N6YA 2CGQA 1DV5A 2FHSC 3DS4A 2FVAA 3B4QA 3LRYA 2KGAA 5HGMA 3CD6P 2BUOA 3CCQP 5F2NA 4PWVB 1M90Q 5EW5E 1KC8Q 2KODA 1VQLP 3P05A 2JO0A 3CCMP 1GPJA 4XRQA 5JPAA 1RO0A 2VLOA 1BXIA 3CXCO 4QNBA 2FVFA 1VQNP 3CMAP 2VLQA 2FQ2A 3CCRP 4R0MA 5DCKA 1YI2P 3MGEA 2JGPA 5KP8B 5F2OA 4GR2A 2GZJA 2GZGA 1GXHA 2KOQA 2EHSA 1K30A 4HKGA 2KW2A 1L0HA 2N98A 2KGDA 2PEJA 2L4BA 2JU2A 1YJNP 1VQ9P 3CC7P 1VQ4P 2CNRA 1K8AQ 2NO8A 1AUMA 1ZNVA 4PH0A 1GXGA 1OR5A 4U0FA 5HGLA 2XT1A 2Z44A 3RG6C 1Q7YQ 2EG5A 2K0XA 4NEOA 1IMPA 3G4SP 1K9MQ 1BAJA 3I55P 2M8LA 2EIAA 2MD9A 1EMVA 2L9FA 1VQPP 3CCJP 3CC4P 1QRJA 2LIUA 2JQ4A 2N5HA 1M74A 1Q86Q 3Q20A 1Q81Q 4M0IA 2PNGA 3EJDA 2QNWA 4PH1A 1YJWP 2KOSA 3G71P 4PXHB 3GZLA 3G26A 1KLPA 2DNWA 2MVUA 4IZ6A 1A8OA 1S72P 1YHQP 1VKUA 4H2WC 2P9XA 5F2KA 2GDWA 2VLNA 2DGYA 2N50A 4U0DA 3RG2A 1RNIA 2KGEA 2JU1A 2AF8A 2LKIA 3LMOA 2K2QA 2MR8A 5KP7B 1M6NA 2M8NA 5EJDA 3CC2P 2X2BA 2K0YA 5I4TG 5BS1A 2L0QA 3E2DA 3DS5A 3HZQA 2MVVA 4BPHA
chains in the Genus database with same CATH topology
2KOPA 2LMLA 5CZDB 2MF4A 1OR5A 5HV8A 2XZ0D 4DG9A 1ACPA 2EHTA 2FQ1A 2N5IA 2K0XA 4NEOA 1NQ4A 2LOLA 1HY8A 4BPGA 1DNYA 2LL8A 2FADA 2LIWA 2N6YA 2AFDA 2KORA 3EJBA 2CGQA 2MD9A 2VSQA 1DV5A 2L9FA 2K94A 2FHSC 2LIUA 2JQ4A 2FVAA 2XZ1C 2N6ZA 2KR5A 2LTEA 2N5HA 2KGAA 2LPKA 2AFEA 2FQ0A 2KGCA 2PNGA 2FAEA 3GZMA 3EJDA 2QNWA 2K92A 5KP6B 4PWVB 5HVCA 2KOSA 1T8KA 2KG8A 4PXHB 3GZLA 2AVAA 1KLPA 2DNWA 2MVUA 2GDYA 2CQ8A 3NY7B 4IZ6A 4H2XC 2L22A 1VKUA 1L0IA 2MR7A 4H2WC 4CA3A 1X3OA 3EJEA 2FVFA 2GDWA 1HQBA 2KG9A 2GDXA 3CE7A 2FQ2A 2FACA 4MRTC 2N50A 4R0MA 2K93A 2JGPA 3RG2A 5KP8B 2KGEA 2M5RA 2JU1A 2AF8A 2LKIA 3LMOA 2K2QA 2MR8A 5KP7B 2KOQA 2EHSA 4HKGA 2KW2A 5EJDA 2CG5B 2KOOA 1L0HA 2X2BA 2K0YA 2N98A 2KGDA 1F80D 2KWLA 2L4BA 2KG6A 2JU2A 2L0QA 2ROQA 4H2YC 2CNRA 2FVEA 1AF8A 2MVVA 4BPHA 2MY5A 4BPFA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2KOP A;  2LML A;  5CZD B;  2MF4 A;  1OR5 A;  5HV8 A;  2XZ0 D;  4DG9 A;  1ACP A;  2EHT A;  2FQ1 A;  2N5I A;  2K0X A;  4NEO A;  1NQ4 A;  2LOL A;  1HY8 A;  4BPG A;  1DNY A;  2LL8 A;  2FAD A;  2LIW A;  2N6Y A;  2AFD A;  2KOR A;  3EJB A;  2CGQ A;  2MD9 A;  2VSQ A;  1DV5 A;  2L9F A;  2K94 A;  2FHS C;  2LIU A;  2JQ4 A;  2FVA A;  2XZ1 C;  2N6Z A;  2KR5 A;  2LTE A;  2N5H A;  2KGA A;  2LPK A;  2AFE A;  2FQ0 A;  2KGC A;  2PNG A;  2FAE A;  3GZM A;  3EJD A;  2QNW A;  2K92 A;  5KP6 B;  4PWV B;  5HVC A;  2KOS A;  1T8K A;  2KG8 A;  4PXH B;  3GZL A;  2AVA A;  1KLP A;  2DNW A;  2MVU A;  2GDY A;  2CQ8 A;  3NY7 B;  4IZ6 A;  4H2X C;  2L22 A;  1VKU A;  1L0I A;  2MR7 A;  4H2W C;  4CA3 A;  1X3O A;  3EJE A;  2FVF A;  2GDW A;  1HQB A;  2KG9 A;  2GDX A;  3CE7 A;  2FQ2 A;  2FAC A;  4MRT C;  2N50 A;  4R0M A;  2K93 A;  2JGP A;  3RG2 A;  5KP8 B;  2KGE A;  2M5R A;  2JU1 A;  2AF8 A;  2LKI A;  3LMO A;  2K2Q A;  2MR8 A;  5KP7 B;  2KOQ A;  2EHS A;  4HKG A;  2KW2 A;  5EJD A;  2CG5 B;  2KOO A;  1L0H A;  2X2B A;  2K0Y A;  2N98 A;  2KGD A;  1F80 D;  2KWL A;  2L4B A;  2KG6 A;  2JU2 A;  2L0Q A;  2ROQ A;  4H2Y C;  2CNR A;  2FVE A;  1AF8 A;  2MVV A;  4BPH A;  2MY5 A;  4BPF A; 
#chains in the Genus database with same CATH topology
 1M1K Q;  2KOP A;  1YIT P;  2LML A;  2BHV A;  5HGO A;  4U0C A;  1JJ2 O;  3DS0 A;  1Z6M A;  3OW2 O;  2XZ0 D;  4DG9 A;  2LF4 A;  2EHT A;  2PEN A;  1QVF O;  2PY8 A;  2N5I A;  3DTJ A;  1NQ4 A;  2VLP A;  2EFJ A;  2QEX P;  2GZF A;  2LIW A;  1E0H A;  3EJB A;  2OTL P;  7CEI A;  2VSQ A;  2K94 A;  2PEK A;  2PEO A;  2ONT A;  1NJI Q;  2LPK A;  2AFE A;  2KGC A;  1CEI A;  2CWO A;  2XXM A;  1UNK A;  2PEM A;  2JB0 A;  5KP6 B;  2XV6 A;  1RO2 A;  1E6J P;  2Z45 A;  1W2B O;  3G21 A;  1K73 Q;  3GKL C;  2GDY A;  2CQ8 A;  4H2X C;  2JYG A;  2MR7 A;  3M1M A;  1X3O A;  1VQO P;  3G1I A;  1IMQ A;  1HQB A;  1VQ8 P;  2GDX A;  3CE7 A;  3CME P;  1QVG O;  4U0B A;  1YJ9 P;  2K93 A;  4UHP B;  2M5R A;  1IUQ A;  1ZMB A;  2CG5 B;  2KOO A;  3CCL P;  3B5I A;  3CCV P;  2ERH A;  2KWL A;  2K5X A;  2WPT A;  4U0E A;  4H2Y C;  3G28 A;  3NTE A;  1AF8 A;  2MY5 A;  4BPF A;  2JBG A;  2MF4 A;  1KD1 Q;  2OTJ P;  2E1M A;  5HGN A;  2OAR A;  1A43 A;  1YIJ P;  1UJZ A;  1VQ5 P;  1EOQ A;  3VRL C;  4XFZ A;  3G0V A;  2M8P A;  2GZE A;  2Z46 A;  1HY8 A;  1DNY A;  2LL8 A;  3HYB A;  3CPW O;  2JYL A;  2AFD A;  2KOR A;  2PEQ A;  3U43 A;  2XZ1 C;  3H47 A;  2N6Z A;  2KR5 A;  2LTE A;  1Q82 Q;  4F37 A;  1VHN A;  3DS2 A;  4XFX A;  2FQ0 A;  2FAE A;  3GZM A;  3CCU P;  3G1G A;  2K92 A;  3CCE P;  1VQM P;  5HVC A;  3DPH A;  1MZ8 A;  3H0D A;  1T8K A;  2KG8 A;  1M6E X;  2AVA A;  4IPY A;  3G6E P;  2PEI A;  4QKO A;  1EIA A;  3NY7 B;  1FR2 A;  2L22 A;  4U0A A;  1VQ6 P;  1L0I A;  4CA3 A;  1AYI A;  3EJE A;  4WYM A;  2KG9 A;  2K0D X;  1KQS O;  2FAC A;  4MRT C;  3CCS P;  3I56 P;  2GYK A;  3DS1 A;  2QA4 P;  1VQ7 P;  2L6E A;  2JAZ A;  4XFY A;  1VQK P;  1D1D A;  1F80 D;  2KG6 A;  2ROQ A;  3WBH A;  2FVE A;  3GJN A;  4COC A;  1N8R Q;  5CZD B;  5HV8 A;  1ACP A;  2FQ1 A;  3DS3 A;  4XRO A;  3H4E A;  2LOL A;  4GR6 A;  5BS2 A;  4BPG A;  2FAD A;  4COP A;  2GZI A;  3G29 A;  2N6Y A;  2CGQ A;  1DV5 A;  2FHS C;  3DS4 A;  2FVA A;  3B4Q A;  3LRY A;  2KGA A;  5HGM A;  3CD6 P;  2BUO A;  3CCQ P;  5F2N A;  4PWV B;  1M90 Q;  5EW5 E;  1KC8 Q;  2KOD A;  1VQL P;  3P05 A;  2JO0 A;  3CCM P;  1GPJ A;  4XRQ A;  5JPA A;  1RO0 A;  2VLO A;  1BXI A;  3CXC O;  4QNB A;  2FVF A;  1VQN P;  3CMA P;  2VLQ A;  2FQ2 A;  3CCR P;  4R0M A;  5DCK A;  1YI2 P;  3MGE A;  2JGP A;  5KP8 B;  5F2O A;  4GR2 A;  2GZJ A;  2GZG A;  1GXH A;  2KOQ A;  2EHS A;  1K30 A;  4HKG A;  2KW2 A;  1L0H A;  2N98 A;  2KGD A;  2PEJ A;  2L4B A;  2JU2 A;  1YJN P;  1VQ9 P;  3CC7 P;  1VQ4 P;  2CNR A;  1K8A Q;  2NO8 A;  1AUM A;  1ZNV A;  4PH0 A;  1GXG A;  1OR5 A;  4U0F A;  5HGL A;  2XT1 A;  2Z44 A;  3RG6 C;  1Q7Y Q;  2EG5 A;  2K0X A;  4NEO A;  1IMP A;  3G4S P;  1K9M Q;  1BAJ A;  3I55 P;  2M8L A;  2EIA A;  2MD9 A;  1EMV A;  2L9F A;  1VQP P;  3CCJ P;  3CC4 P;  1QRJ A;  2LIU A;  2JQ4 A;  2N5H A;  1M74 A;  1Q86 Q;  3Q20 A;  1Q81 Q;  4M0I A;  2PNG A;  3EJD A;  2QNW A;  4PH1 A;  1YJW P;  2KOS A;  3G71 P;  4PXH B;  3GZL A;  3G26 A;  1KLP A;  2DNW A;  2MVU A;  4IZ6 A;  1A8O A;  1S72 P;  1YHQ P;  1VKU A;  4H2W C;  2P9X A;  5F2K A;  2GDW A;  2VLN A;  2DGY A;  2N50 A;  4U0D A;  3RG2 A;  1RNI A;  2KGE A;  2JU1 A;  2AF8 A;  2LKI A;  3LMO A;  2K2Q A;  2MR8 A;  5KP7 B;  1M6N A;  2M8N A;  5EJD A;  3CC2 P;  2X2B A;  2K0Y A;  5I4T G;  5BS1 A;  2L0Q A;  3E2D A;  3DS5 A;  3HZQ A;  2MVV A;  4BPH A; 
#chains in the Genus database with same CATH homology
 2KOP A;  2LML A;  5CZD B;  2MF4 A;  1OR5 A;  5HV8 A;  2XZ0 D;  4DG9 A;  1ACP A;  2EHT A;  2FQ1 A;  2N5I A;  2K0X A;  4NEO A;  1NQ4 A;  2LOL A;  1HY8 A;  4BPG A;  1DNY A;  2LL8 A;  2FAD A;  2LIW A;  2N6Y A;  2AFD A;  2KOR A;  3EJB A;  2CGQ A;  2MD9 A;  2VSQ A;  1DV5 A;  2L9F A;  2K94 A;  2FHS C;  2LIU A;  2JQ4 A;  2FVA A;  2XZ1 C;  2N6Z A;  2KR5 A;  2LTE A;  2N5H A;  2KGA A;  2LPK A;  2AFE A;  2FQ0 A;  2KGC A;  2PNG A;  2FAE A;  3GZM A;  3EJD A;  2QNW A;  2K92 A;  5KP6 B;  4PWV B;  5HVC A;  2KOS A;  1T8K A;  2KG8 A;  4PXH B;  3GZL A;  2AVA A;  1KLP A;  2DNW A;  2MVU A;  2GDY A;  2CQ8 A;  3NY7 B;  4IZ6 A;  4H2X C;  2L22 A;  1VKU A;  1L0I A;  2MR7 A;  4H2W C;  4CA3 A;  1X3O A;  3EJE A;  2FVF A;  2GDW A;  1HQB A;  2KG9 A;  2GDX A;  3CE7 A;  2FQ2 A;  2FAC A;  4MRT C;  2N50 A;  4R0M A;  2K93 A;  2JGP A;  3RG2 A;  5KP8 B;  2KGE A;  2M5R A;  2JU1 A;  2AF8 A;  2LKI A;  3LMO A;  2K2Q A;  2MR8 A;  5KP7 B;  2KOQ A;  2EHS A;  4HKG A;  2KW2 A;  5EJD A;  2CG5 B;  2KOO A;  1L0H A;  2X2B A;  2K0Y A;  2N98 A;  2KGD A;  1F80 D;  2KWL A;  2L4B A;  2KG6 A;  2JU2 A;  2L0Q A;  2ROQ A;  4H2Y C;  2CNR A;  2FVE A;  1AF8 A;  2MVV A;  4BPH A;  2MY5 A;  4BPF A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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