1AF8A

Actinorhodin polyketide synthase acyl carrier protein from streptomyces coelicolor a3(2), nmr, 24 structures
Total Genus 16
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
16
sequence length
86
structure length
86
Chain Sequence
MATLLTTDDLRRALVECAGETDGTDLSGDFLDLRFEDIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLINGALAEAA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords ACTINORHODIN POLYKETIDE SYNTHASE ACYL CARRIER PROTEIN
publication title Solution structure of the actinorhodin polyketide synthase acyl carrier protein from Streptomyces coelicolor A3(2).
pubmed doi rcsb
source organism Streptomyces coelicolor
molecule tags Antibiotic biosynthesis
total genus 16
structure length 86
sequence length 86
ec nomenclature
pdb deposition date 1997-03-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 1af8A00
2LIWA 2MVUA 4H2WC 3EJBA 4PXHB 2K93A 2X2BA 2MF4A 4DG9A 1NQ4A 4BPHA 2EHTA 5KP7B 3GZMA 2ROQA 4IZ6A 2JU1A 2KORA 2K0XA 2AF8A 2MY5A 4H2XC 1T8KA 2KR5A 1VKUA 3LMOA 2JU2A 5HVCA 2MR8A 2L0QA 3NY7B 4NEOA 2FQ1A 1HY8A 5EJDA 1KLPA 2MVVA 2KG6A 2QNWA 2N6YA 2LPKA 2LMLA 2KOQA 1DNYA 1ACPA 2JQ4A 2JGPA 2KOOA 1F80D 3EJEA 2FQ2A 2KOPA 2EHSA 2DNWA 2KW2A 2GDXA 2FAEA 2LTEA 2K2QA 2K92A 4CA3A 4R0MA 2LIUA 5HV8A 2N98A 2N50A 2KGAA 2AFDA 2LOLA 2XZ1C 2K94A 2PNGA 2MR7A 2KOSA 2FHSC 2M5RA 3GZLA 2KWLA 2LKIA 2LL8A 2N5IA 3EJDA 2N5HA 4BPGA 2L22A 2CNRA 2CGQA 1L0HA 2FADA 2N6ZA 2FVFA 2K0YA 2KG8A 1DV5A 1HQBA 3RG2A 4HKGA 2AVAA 1OR5A 2KG9A 2L4BA 2FVAA 2FACA 2CQ8A 2KGCA 2KGDA 5CZDB 2AFEA 1AF8A 1L0IA 1X3OA 2FQ0A 4PWVB 2GDYA 4MRTC 5KP8B 4BPFA 2CG5B 2KGEA 2FVEA 5KP6B 2XZ0D 4H2YC 3CE7A 2L9FA 2VSQA 2GDWA 2MD9A
chains in the Genus database with same CATH superfamily
1YJ9P 2Z44A 2MVUA 4H2WC 1QVGO 2GZJA 4GR6A 2K0XA 2AF8A 5F2KA 3U43A 4UHPB 3M1MA 4U0CA 2MR8A 2JYLA 1W2BO 2FQ1A 1HY8A 1UNKA 1Q7YQ 2MVVA 1IMQA 2KG6A 4XRQA 2PY8A 2LMLA 2JQ4A 2JGPA 3EJEA 3HZQA 2EHSA 3CMAP 2DNWA 2Z46A 2GDXA 3G1IA 4GR2A 2CWOA 2LIUA 5HGOA 1Q82Q 1ZNVA 1VQLP 2XZ1C 1K8AQ 3CMEP 4COPA 2ONTA 2M5RA 1VQ8P 2KWLA 2LL8A 5HGNA 2WPTA 3CC2P 2N5IA 2N5HA 2FADA 4U0BA 2K0YA 1NJIQ 1KC8Q 3H0DA 2QA4P 2L4BA 4IPYA 1JJ2O 2KGCA 3NTEA 5CZDB 1VQ5P 2AFEA 1AF8A 4PH1A 1L0IA 2PENA 1YJNP 2XV6A 5KP8B 3G26A 2CG5B 5KP6B 3CE7A 2JBGA 2L9FA 3E2DA 2GZGA 2OTJP 4U0AA 1A43A 2JO0A 1YI2P 1K30A 2K93A 2X2BA 1GXHA 2MF4A 2EHTA 5KP7B 2ROQA 4IZ6A 3CC4P 2PEMA 1GXGA 2OARA 4H2XC 1T8KA 3LMOA 3P05A 1Q81Q 1AYIA 1QRJA 2L0QA 3CCEP 3CPWO 4QKOA 2N6YA 2KOQA 1ACPA 1UJZA 1F80D 2EFJA 2JB0A 2M8NA 2KW2A 1D1DA 2LTEA 5F2OA 5EW5E 5HV8A 2KGAA 2E1MA 1VQNP 1E6JP 3G71P 3DS3A 2FHSC 1IUQA 3B5IA 2L6EA 2LKIA 2JAZA 3CCJP 2VLOA 1Z6MA 4BPGA 1QVFO 2L22A 1K73Q 3H47A 3I55P 5DCKA 1L0HA 1M74A 1VQ7P 5HGMA 1HQBA 4HKGA 3CCRP 2AVAA 3CCMP 2CQ8A 3VRLC 2KGDA 1VQ4P 2PEJA 4PWVB 2M8PA 2GDYA 4MRTC 2OTLP 5I4TG 2MD9A 2LIWA 4XFYA 4XFZA 4PXHB 4DG9A 1NQ4A 4BPHA 3DS4A 3GZMA 2KORA 3G1GA 2JYGA 4M0IA 3DS2A 2KR5A 1VKUA 3CC7P 2M8LA 3I56P 1A8OA 2XT1A 2PEOA 3MGEA 1EMVA 3DS5A 1RNIA 1EOQA 2GZEA 5EJDA 1KLPA 5F2NA 2BUOA 2QNWA 5JPAA 1MZ8A 4QNBA 2KODA 3WBHA 1IMPA 1VQ6P 3CCQP 2FAEA 5BS1A 2K2QA 1RO2A 2K92A 4CA3A 4R0MA 2N98A 3H4EA 2N50A 2ERHA 2LOLA 3DTJA 3GJNA 2MR7A 3DS1A 3G28A 1GPJA 3LRYA 1ZMBA 3DS0A 1BXIA 3CCSP 1VHNA 4XFXA 3EJDA 4U0EA 2CNRA 2CGQA 7CEIA 1YHQP 4U0DA 1S72P 2N6ZA 1M6NA 2FVFA 2KG8A 1RO0A 3G21A 3CXCO 3RG2A 2PEIA 2FACA 5HGLA 1FR2A 4XROA 1K9MQ 3HYBA 2FQ0A 1BAJA 4BPFA 2BHVA 2LF4A 2KGEA 2FVEA 2XZ0D 4H2YC 1VQPP 2PEQA 2GDWA 3G4SP 2K0DX 1M1KQ 4F37A 2EG5A 1Q86Q 2Z45A 3EJBA 3OW2O 1E0HA 3Q20A 2P9XA 2XXMA 4U0FA 3CCUP 2JU1A 3CCVP 3CCLP 4WYMA 1YJWP 2MY5A 1AUMA 4PH0A 3G6EP 1YIJP 3G29A 2JU2A 5HVCA 3NY7B 4NEOA 4COCA 1VQKP 1VQOP 1YITP 2LPKA 1DNYA 2KOOA 3B4QA 2FQ2A 2KOPA 1KD1Q 2GZFA 2DGYA 3GKLC 2GZIA 1VQMP 5BS2A 3DPHA 2AFDA 2EIAA 2K94A 2PNGA 3CD6P 2KOSA 1EIAA 3GZLA 2VLPA 3RG6C 1M6EX 3G0VA 1VQ9P 2GYKA 2K5XA 2VLNA 1KQSO 1DV5A 2KG9A 1OR5A 2FVAA 2NO8A 1M90Q 2VLQA 1X3OA 1CEIA 2QEXP 2VSQA 2PEKA 1N8RQ
chains in the Genus database with same CATH topology
2LIWA 2MVUA 4H2WC 3EJBA 4PXHB 2K93A 2X2BA 2MF4A 4DG9A 1NQ4A 4BPHA 2EHTA 5KP7B 3GZMA 2ROQA 4IZ6A 2JU1A 2KORA 2K0XA 2AF8A 2MY5A 4H2XC 1T8KA 2KR5A 1VKUA 3LMOA 2JU2A 5HVCA 2MR8A 2L0QA 3NY7B 4NEOA 2FQ1A 1HY8A 5EJDA 1KLPA 2MVVA 2KG6A 2QNWA 2N6YA 2LPKA 2LMLA 2KOQA 1DNYA 1ACPA 2JQ4A 2JGPA 2KOOA 1F80D 3EJEA 2FQ2A 2KOPA 2EHSA 2DNWA 2KW2A 2GDXA 2FAEA 2LTEA 2K2QA 2K92A 4CA3A 4R0MA 2LIUA 5HV8A 2N98A 2N50A 2KGAA 2AFDA 2LOLA 2XZ1C 2K94A 2PNGA 2MR7A 2KOSA 2FHSC 2M5RA 3GZLA 2KWLA 2LKIA 2LL8A 2N5IA 3EJDA 2N5HA 4BPGA 2L22A 2CNRA 2CGQA 1L0HA 2FADA 2N6ZA 2FVFA 2K0YA 2KG8A 1DV5A 1HQBA 3RG2A 4HKGA 2AVAA 1OR5A 2KG9A 2L4BA 2FVAA 2FACA 2CQ8A 2KGCA 2KGDA 5CZDB 2AFEA 1AF8A 1L0IA 1X3OA 2FQ0A 4PWVB 2GDYA 4MRTC 5KP8B 4BPFA 2CG5B 2KGEA 2FVEA 5KP6B 2XZ0D 4H2YC 3CE7A 2L9FA 2VSQA 2GDWA 2MD9A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2LIW A;  2MVU A;  4H2W C;  3EJB A;  4PXH B;  2K93 A;  2X2B A;  2MF4 A;  4DG9 A;  1NQ4 A;  4BPH A;  2EHT A;  5KP7 B;  3GZM A;  2ROQ A;  4IZ6 A;  2JU1 A;  2KOR A;  2K0X A;  2AF8 A;  2MY5 A;  4H2X C;  1T8K A;  2KR5 A;  1VKU A;  3LMO A;  2JU2 A;  5HVC A;  2MR8 A;  2L0Q A;  3NY7 B;  4NEO A;  2FQ1 A;  1HY8 A;  5EJD A;  1KLP A;  2MVV A;  2KG6 A;  2QNW A;  2N6Y A;  2LPK A;  2LML A;  2KOQ A;  1DNY A;  1ACP A;  2JQ4 A;  2JGP A;  2KOO A;  1F80 D;  3EJE A;  2FQ2 A;  2KOP A;  2EHS A;  2DNW A;  2KW2 A;  2GDX A;  2FAE A;  2LTE A;  2K2Q A;  2K92 A;  4CA3 A;  4R0M A;  2LIU A;  5HV8 A;  2N98 A;  2N50 A;  2KGA A;  2AFD A;  2LOL A;  2XZ1 C;  2K94 A;  2PNG A;  2MR7 A;  2KOS A;  2FHS C;  2M5R A;  3GZL A;  2KWL A;  2LKI A;  2LL8 A;  2N5I A;  3EJD A;  2N5H A;  4BPG A;  2L22 A;  2CNR A;  2CGQ A;  1L0H A;  2FAD A;  2N6Z A;  2FVF A;  2K0Y A;  2KG8 A;  1DV5 A;  1HQB A;  3RG2 A;  4HKG A;  2AVA A;  1OR5 A;  2KG9 A;  2L4B A;  2FVA A;  2FAC A;  2CQ8 A;  2KGC A;  2KGD A;  5CZD B;  2AFE A;  1AF8 A;  1L0I A;  1X3O A;  2FQ0 A;  4PWV B;  2GDY A;  4MRT C;  5KP8 B;  4BPF A;  2CG5 B;  2KGE A;  2FVE A;  5KP6 B;  2XZ0 D;  4H2Y C;  3CE7 A;  2L9F A;  2VSQ A;  2GDW A;  2MD9 A; 
#chains in the Genus database with same CATH topology
 1YJ9 P;  2Z44 A;  2MVU A;  4H2W C;  1QVG O;  2GZJ A;  4GR6 A;  2K0X A;  2AF8 A;  5F2K A;  3U43 A;  4UHP B;  3M1M A;  4U0C A;  2MR8 A;  2JYL A;  1W2B O;  2FQ1 A;  1HY8 A;  1UNK A;  1Q7Y Q;  2MVV A;  1IMQ A;  2KG6 A;  4XRQ A;  2PY8 A;  2LML A;  2JQ4 A;  2JGP A;  3EJE A;  3HZQ A;  2EHS A;  3CMA P;  2DNW A;  2Z46 A;  2GDX A;  3G1I A;  4GR2 A;  2CWO A;  2LIU A;  5HGO A;  1Q82 Q;  1ZNV A;  1VQL P;  2XZ1 C;  1K8A Q;  3CME P;  4COP A;  2ONT A;  2M5R A;  1VQ8 P;  2KWL A;  2LL8 A;  5HGN A;  2WPT A;  3CC2 P;  2N5I A;  2N5H A;  2FAD A;  4U0B A;  2K0Y A;  1NJI Q;  1KC8 Q;  3H0D A;  2QA4 P;  2L4B A;  4IPY A;  1JJ2 O;  2KGC A;  3NTE A;  5CZD B;  1VQ5 P;  2AFE A;  1AF8 A;  4PH1 A;  1L0I A;  2PEN A;  1YJN P;  2XV6 A;  5KP8 B;  3G26 A;  2CG5 B;  5KP6 B;  3CE7 A;  2JBG A;  2L9F A;  3E2D A;  2GZG A;  2OTJ P;  4U0A A;  1A43 A;  2JO0 A;  1YI2 P;  1K30 A;  2K93 A;  2X2B A;  1GXH A;  2MF4 A;  2EHT A;  5KP7 B;  2ROQ A;  4IZ6 A;  3CC4 P;  2PEM A;  1GXG A;  2OAR A;  4H2X C;  1T8K A;  3LMO A;  3P05 A;  1Q81 Q;  1AYI A;  1QRJ A;  2L0Q A;  3CCE P;  3CPW O;  4QKO A;  2N6Y A;  2KOQ A;  1ACP A;  1UJZ A;  1F80 D;  2EFJ A;  2JB0 A;  2M8N A;  2KW2 A;  1D1D A;  2LTE A;  5F2O A;  5EW5 E;  5HV8 A;  2KGA A;  2E1M A;  1VQN P;  1E6J P;  3G71 P;  3DS3 A;  2FHS C;  1IUQ A;  3B5I A;  2L6E A;  2LKI A;  2JAZ A;  3CCJ P;  2VLO A;  1Z6M A;  4BPG A;  1QVF O;  2L22 A;  1K73 Q;  3H47 A;  3I55 P;  5DCK A;  1L0H A;  1M74 A;  1VQ7 P;  5HGM A;  1HQB A;  4HKG A;  3CCR P;  2AVA A;  3CCM P;  2CQ8 A;  3VRL C;  2KGD A;  1VQ4 P;  2PEJ A;  4PWV B;  2M8P A;  2GDY A;  4MRT C;  2OTL P;  5I4T G;  2MD9 A;  2LIW A;  4XFY A;  4XFZ A;  4PXH B;  4DG9 A;  1NQ4 A;  4BPH A;  3DS4 A;  3GZM A;  2KOR A;  3G1G A;  2JYG A;  4M0I A;  3DS2 A;  2KR5 A;  1VKU A;  3CC7 P;  2M8L A;  3I56 P;  1A8O A;  2XT1 A;  2PEO A;  3MGE A;  1EMV A;  3DS5 A;  1RNI A;  1EOQ A;  2GZE A;  5EJD A;  1KLP A;  5F2N A;  2BUO A;  2QNW A;  5JPA A;  1MZ8 A;  4QNB A;  2KOD A;  3WBH A;  1IMP A;  1VQ6 P;  3CCQ P;  2FAE A;  5BS1 A;  2K2Q A;  1RO2 A;  2K92 A;  4CA3 A;  4R0M A;  2N98 A;  3H4E A;  2N50 A;  2ERH A;  2LOL A;  3DTJ A;  3GJN A;  2MR7 A;  3DS1 A;  3G28 A;  1GPJ A;  3LRY A;  1ZMB A;  3DS0 A;  1BXI A;  3CCS P;  1VHN A;  4XFX A;  3EJD A;  4U0E A;  2CNR A;  2CGQ A;  7CEI A;  1YHQ P;  4U0D A;  1S72 P;  2N6Z A;  1M6N A;  2FVF A;  2KG8 A;  1RO0 A;  3G21 A;  3CXC O;  3RG2 A;  2PEI A;  2FAC A;  5HGL A;  1FR2 A;  4XRO A;  1K9M Q;  3HYB A;  2FQ0 A;  1BAJ A;  4BPF A;  2BHV A;  2LF4 A;  2KGE A;  2FVE A;  2XZ0 D;  4H2Y C;  1VQP P;  2PEQ A;  2GDW A;  3G4S P;  2K0D X;  1M1K Q;  4F37 A;  2EG5 A;  1Q86 Q;  2Z45 A;  3EJB A;  3OW2 O;  1E0H A;  3Q20 A;  2P9X A;  2XXM A;  4U0F A;  3CCU P;  2JU1 A;  3CCV P;  3CCL P;  4WYM A;  1YJW P;  2MY5 A;  1AUM A;  4PH0 A;  3G6E P;  1YIJ P;  3G29 A;  2JU2 A;  5HVC A;  3NY7 B;  4NEO A;  4COC A;  1VQK P;  1VQO P;  1YIT P;  2LPK A;  1DNY A;  2KOO A;  3B4Q A;  2FQ2 A;  2KOP A;  1KD1 Q;  2GZF A;  2DGY A;  3GKL C;  2GZI A;  1VQM P;  5BS2 A;  3DPH A;  2AFD A;  2EIA A;  2K94 A;  2PNG A;  3CD6 P;  2KOS A;  1EIA A;  3GZL A;  2VLP A;  3RG6 C;  1M6E X;  3G0V A;  1VQ9 P;  2GYK A;  2K5X A;  2VLN A;  1KQS O;  1DV5 A;  2KG9 A;  1OR5 A;  2FVA A;  2NO8 A;  1M90 Q;  2VLQ A;  1X3O A;  1CEI A;  2QEX P;  2VSQ A;  2PEK A;  1N8R Q; 
#chains in the Genus database with same CATH homology
 2LIW A;  2MVU A;  4H2W C;  3EJB A;  4PXH B;  2K93 A;  2X2B A;  2MF4 A;  4DG9 A;  1NQ4 A;  4BPH A;  2EHT A;  5KP7 B;  3GZM A;  2ROQ A;  4IZ6 A;  2JU1 A;  2KOR A;  2K0X A;  2AF8 A;  2MY5 A;  4H2X C;  1T8K A;  2KR5 A;  1VKU A;  3LMO A;  2JU2 A;  5HVC A;  2MR8 A;  2L0Q A;  3NY7 B;  4NEO A;  2FQ1 A;  1HY8 A;  5EJD A;  1KLP A;  2MVV A;  2KG6 A;  2QNW A;  2N6Y A;  2LPK A;  2LML A;  2KOQ A;  1DNY A;  1ACP A;  2JQ4 A;  2JGP A;  2KOO A;  1F80 D;  3EJE A;  2FQ2 A;  2KOP A;  2EHS A;  2DNW A;  2KW2 A;  2GDX A;  2FAE A;  2LTE A;  2K2Q A;  2K92 A;  4CA3 A;  4R0M A;  2LIU A;  5HV8 A;  2N98 A;  2N50 A;  2KGA A;  2AFD A;  2LOL A;  2XZ1 C;  2K94 A;  2PNG A;  2MR7 A;  2KOS A;  2FHS C;  2M5R A;  3GZL A;  2KWL A;  2LKI A;  2LL8 A;  2N5I A;  3EJD A;  2N5H A;  4BPG A;  2L22 A;  2CNR A;  2CGQ A;  1L0H A;  2FAD A;  2N6Z A;  2FVF A;  2K0Y A;  2KG8 A;  1DV5 A;  1HQB A;  3RG2 A;  4HKG A;  2AVA A;  1OR5 A;  2KG9 A;  2L4B A;  2FVA A;  2FAC A;  2CQ8 A;  2KGC A;  2KGD A;  5CZD B;  2AFE A;  1AF8 A;  1L0I A;  1X3O A;  2FQ0 A;  4PWV B;  2GDY A;  4MRT C;  5KP8 B;  4BPF A;  2CG5 B;  2KGE A;  2FVE A;  5KP6 B;  2XZ0 D;  4H2Y C;  3CE7 A;  2L9F A;  2VSQ A;  2GDW A;  2MD9 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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