2K0XA

The actinorhodin holo acyl carrier protein from s. coelicolor
Total Genus 23
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
23
sequence length
86
structure length
86
Chain Sequence
MATLLTTDDLRRALVESAGETDGTDLSGDFLDLRFEDIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLINGALAEAA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Actinorhodin polyketide synthase acyl carrier protein
publication title An ACP Structural Switch: Conformational Differences between the Apo and Holo Forms of the Actinorhodin Polyketide Synthase Acyl Carrier Protein.
pubmed doi rcsb
source organism Streptomyces coelicolor
molecule tags Transport protein
total genus 23
structure length 86
sequence length 86
ec nomenclature
pdb deposition date 2008-02-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2k0xA00
4NEOA 2KR5A 2N6ZA 2JU2A 2XZ0D 2MY5A 5HV8A 2FHSC 2LOLA 2KG6A 2FQ1A 2FVFA 2CG5B 2L9FA 4BPGA 2FQ2A 5KP7B 2MF4A 2AVAA 3GZMA 2LIWA 4BPHA 3EJEA 2QNWA 2PNGA 3GZLA 2M5RA 1HY8A 2KW2A 2KOQA 1VKUA 1HQBA 3RG2A 3NY7B 4PWVB 2K0YA 2K94A 2LPKA 2N6YA 2DNWA 2FQ0A 1DV5A 2GDYA 2FACA 2EHSA 5KP8B 2MR8A 4IZ6A 1KLPA 4BPFA 2KG8A 2N5IA 2K0XA 2N98A 2AFEA 2KGAA 2FVAA 2L22A 2GDWA 2JGPA 2N50A 2KWLA 3CE7A 2MVVA 1ACPA 4R0MA 2FADA 2MVUA 2X2BA 2LIUA 1L0HA 4DG9A 2KGEA 1F80D 2KGDA 4H2WC 4MRTC 2LKIA 4H2XC 4HKGA 2XZ1C 2LMLA 2L0QA 2KG9A 2LL8A 2CNRA 3LMOA 1L0IA 2MR7A 2GDXA 2CGQA 5HVCA 2AF8A 2N5HA 3EJBA 4CA3A 2ROQA 4PXHB 2L4BA 2LTEA 2K93A 2JQ4A 4H2YC 2FVEA 2KOOA 2K2QA 2VSQA 1DNYA 2FAEA 2EHTA 5EJDA 2AFDA 1X3OA 2KGCA 2KOSA 3EJDA 1AF8A 1NQ4A 2MD9A 2KORA 2CQ8A 5CZDB 2K92A 1T8KA 2KOPA 5KP6B 1OR5A 2JU1A
chains in the Genus database with same CATH superfamily
4NEOA 4U0BA 2N6ZA 7CEIA 2JU2A 2NO8A 3P05A 2L9FA 2PEIA 2PEQA 3H4EA 2M8NA 2AVAA 3CCQP 2E1MA 3GZMA 3WBHA 2QNWA 2M5RA 3G21A 3DS5A 1YJWP 1Q81Q 1HY8A 2GZJA 4COCA 3G0VA 2BUOA 2K94A 2DNWA 2Z45A 2FQ0A 2FACA 5KP8B 1K9MQ 4IZ6A 3CCEP 2M8LA 2JYGA 1YI2P 2KWLA 2MVVA 2K0DX 1EIAA 3G6EP 3CCLP 2EIAA 2KGEA 4GR2A 1VQ8P 2KGDA 2GZEA 2M8PA 4F37A 4UHPB 2PEMA 2VLOA 3E2DA 1RO0A 2GDXA 3U43A 2ONTA 2XT1A 5EW5E 4PXHB 2L4BA 1FR2A 4H2YC 1VHNA 1BXIA 1EOQA 3CPWO 1KD1Q 1VQ9P 2JYLA 2GYKA 1OR5A 5F2KA 5BS2A 2Z44A 2LOLA 1RO2A 2KG6A 2FQ1A 4XROA 1E0HA 2CG5B 5KP7B 5HGLA 1VQ4P 3CCSP 1KQSO 3EJEA 4QNBA 1YIJP 4QKOA 2KOQA 1HQBA 2OTJP 3RG2A 3DTJA 1RNIA 2PEKA 1QVFO 1ZNVA 2GDYA 2K5XA 2MR8A 1IMPA 1QRJA 3M1MA 4BPFA 1YJNP 4COPA 1M6NA 5F2OA 5BS1A 2AFEA 2PEOA 2FVAA 1Q86Q 2ERHA 3CE7A 3CXCO 1GPJA 2OTLP 2MVUA 2PEJA 4PH0A 3CCUP 3G29A 3CCJP 3DS2A 1A43A 4MRTC 2LKIA 4U0EA 1IUQA 4XFXA 4HKGA 1JJ2O 2LMLA 2JB0A 4XFZA 3GKLC 3DPHA 4U0AA 2AF8A 3OW2O 2N5HA 3EJBA 4U0FA 2LTEA 2FVEA 3RG6C 2VSQA 2EG5A 2KOSA 3EJDA 3VRLC 1NQ4A 2JBGA 2VLQA 2DGYA 2LF4A 5CZDB 2KR5A 3Q20A 3MGEA 2PY8A 1UJZA 1AYIA 2XZ0D 2MY5A 2FHSC 3CCMP 2FVFA 5HGOA 3CD6P 3DS1A 1MZ8A 2MF4A 1VQMP 5I4TG 3G4SP 4WYMA 1VQ5P 3I56P 3DS3A 1M1KQ 3I55P 1VKUA 2K0YA 2PENA 1Q82Q 3LRYA 2VLPA 1KLPA 3GJNA 2N5IA 2N98A 2KGAA 1QVGO 1GXHA 3G1GA 2N50A 4R0MA 1VQOP 2X2BA 2CWOA 2LIUA 1VQKP 1L0HA 3CCVP 3H0DA 1VQPP 5HGNA 4H2WC 2QEXP 2XV6A 4XRQA 3DS4A 2P9XA 2GZFA 2L0QA 1YITP 2LL8A 2CNRA 1M90Q 1BAJA 2WPTA 2QA4P 5HVCA 1GXGA 3CMAP 2GZIA 2ROQA 3B5IA 1ZMBA 4XFYA 1VQLP 3CMEP 1VQ7P 2GZGA 2K93A 5HGMA 2KOOA 2K2QA 1IMQA 4U0CA 2EHTA 5EJDA 1KC8Q 2AFDA 3CC2P 1X3OA 2KGCA 1AF8A 2KODA 5DCKA 1M74A 2CQ8A 2EFJA 1T8KA 2K92A 2XXMA 5HV8A 1K8AQ 2Z46A 3HYBA 4M0IA 4BPGA 2FQ2A 4PH1A 2LIWA 1UNKA 4BPHA 3CC7P 2PNGA 3GZLA 1NJIQ 1A8OA 1Z6MA 1AUMA 2KW2A 3CCRP 3NY7B 4PWVB 2N6YA 2LPKA 1DV5A 2EHSA 3G71P 2OARA 1YHQP 3G26A 1S72P 5JPAA 2KG8A 3HZQA 2JAZA 1Q7YQ 2K0XA 2L22A 2GDWA 2JGPA 1VQ6P 3H47A 1ACPA 2FADA 2BHVA 4DG9A 1VQNP 4IPYA 1F80D 1CEIA 1YJ9P 1W2BO 4H2XC 2VLNA 2XZ1C 3DS0A 4U0DA 2KG9A 1K30A 2JO0A 3G28A 3LMOA 1L0IA 2MR7A 3B4QA 2CGQA 1EMVA 3G1IA 4CA3A 1K73Q 2JQ4A 1N8RQ 1DNYA 1D1DA 4GR6A 3NTEA 2FAEA 1M6EX 5F2NA 2L6EA 3CC4P 2MD9A 1E6JP 2KORA 5KP6B 2KOPA 2JU1A
chains in the Genus database with same CATH topology
4NEOA 2KR5A 2N6ZA 2JU2A 2XZ0D 2MY5A 5HV8A 2FHSC 2LOLA 2KG6A 2FQ1A 2FVFA 2CG5B 2L9FA 4BPGA 2FQ2A 5KP7B 2MF4A 2AVAA 3GZMA 2LIWA 4BPHA 3EJEA 2QNWA 2PNGA 3GZLA 2M5RA 1HY8A 2KW2A 2KOQA 1VKUA 1HQBA 3RG2A 3NY7B 4PWVB 2K0YA 2K94A 2LPKA 2N6YA 2DNWA 2FQ0A 1DV5A 2GDYA 2FACA 2EHSA 5KP8B 2MR8A 4IZ6A 1KLPA 4BPFA 2KG8A 2N5IA 2K0XA 2N98A 2AFEA 2KGAA 2FVAA 2L22A 2GDWA 2JGPA 2N50A 2KWLA 3CE7A 2MVVA 1ACPA 4R0MA 2FADA 2MVUA 2X2BA 2LIUA 1L0HA 4DG9A 2KGEA 1F80D 2KGDA 4H2WC 4MRTC 2LKIA 4H2XC 4HKGA 2XZ1C 2LMLA 2L0QA 2KG9A 2LL8A 2CNRA 3LMOA 1L0IA 2MR7A 2GDXA 2CGQA 5HVCA 2AF8A 2N5HA 3EJBA 4CA3A 2ROQA 4PXHB 2L4BA 2LTEA 2K93A 2JQ4A 4H2YC 2FVEA 2KOOA 2K2QA 2VSQA 1DNYA 2FAEA 2EHTA 5EJDA 2AFDA 1X3OA 2KGCA 2KOSA 3EJDA 1AF8A 1NQ4A 2MD9A 2KORA 2CQ8A 5CZDB 2K92A 1T8KA 2KOPA 5KP6B 1OR5A 2JU1A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4NEO A;  2KR5 A;  2N6Z A;  2JU2 A;  2XZ0 D;  2MY5 A;  5HV8 A;  2FHS C;  2LOL A;  2KG6 A;  2FQ1 A;  2FVF A;  2CG5 B;  2L9F A;  4BPG A;  2FQ2 A;  5KP7 B;  2MF4 A;  2AVA A;  3GZM A;  2LIW A;  4BPH A;  3EJE A;  2QNW A;  2PNG A;  3GZL A;  2M5R A;  1HY8 A;  2KW2 A;  2KOQ A;  1VKU A;  1HQB A;  3RG2 A;  3NY7 B;  4PWV B;  2K0Y A;  2K94 A;  2LPK A;  2N6Y A;  2DNW A;  2FQ0 A;  1DV5 A;  2GDY A;  2FAC A;  2EHS A;  5KP8 B;  2MR8 A;  4IZ6 A;  1KLP A;  4BPF A;  2KG8 A;  2N5I A;  2K0X A;  2N98 A;  2AFE A;  2KGA A;  2FVA A;  2L22 A;  2GDW A;  2JGP A;  2N50 A;  2KWL A;  3CE7 A;  2MVV A;  1ACP A;  4R0M A;  2FAD A;  2MVU A;  2X2B A;  2LIU A;  1L0H A;  4DG9 A;  2KGE A;  1F80 D;  2KGD A;  4H2W C;  4MRT C;  2LKI A;  4H2X C;  4HKG A;  2XZ1 C;  2LML A;  2L0Q A;  2KG9 A;  2LL8 A;  2CNR A;  3LMO A;  1L0I A;  2MR7 A;  2GDX A;  2CGQ A;  5HVC A;  2AF8 A;  2N5H A;  3EJB A;  4CA3 A;  2ROQ A;  4PXH B;  2L4B A;  2LTE A;  2K93 A;  2JQ4 A;  4H2Y C;  2FVE A;  2KOO A;  2K2Q A;  2VSQ A;  1DNY A;  2FAE A;  2EHT A;  5EJD A;  2AFD A;  1X3O A;  2KGC A;  2KOS A;  3EJD A;  1AF8 A;  1NQ4 A;  2MD9 A;  2KOR A;  2CQ8 A;  5CZD B;  2K92 A;  1T8K A;  2KOP A;  5KP6 B;  1OR5 A;  2JU1 A; 
#chains in the Genus database with same CATH topology
 4NEO A;  4U0B A;  2N6Z A;  7CEI A;  2JU2 A;  2NO8 A;  3P05 A;  2L9F A;  2PEI A;  2PEQ A;  3H4E A;  2M8N A;  2AVA A;  3CCQ P;  2E1M A;  3GZM A;  3WBH A;  2QNW A;  2M5R A;  3G21 A;  3DS5 A;  1YJW P;  1Q81 Q;  1HY8 A;  2GZJ A;  4COC A;  3G0V A;  2BUO A;  2K94 A;  2DNW A;  2Z45 A;  2FQ0 A;  2FAC A;  5KP8 B;  1K9M Q;  4IZ6 A;  3CCE P;  2M8L A;  2JYG A;  1YI2 P;  2KWL A;  2MVV A;  2K0D X;  1EIA A;  3G6E P;  3CCL P;  2EIA A;  2KGE A;  4GR2 A;  1VQ8 P;  2KGD A;  2GZE A;  2M8P A;  4F37 A;  4UHP B;  2PEM A;  2VLO A;  3E2D A;  1RO0 A;  2GDX A;  3U43 A;  2ONT A;  2XT1 A;  5EW5 E;  4PXH B;  2L4B A;  1FR2 A;  4H2Y C;  1VHN A;  1BXI A;  1EOQ A;  3CPW O;  1KD1 Q;  1VQ9 P;  2JYL A;  2GYK A;  1OR5 A;  5F2K A;  5BS2 A;  2Z44 A;  2LOL A;  1RO2 A;  2KG6 A;  2FQ1 A;  4XRO A;  1E0H A;  2CG5 B;  5KP7 B;  5HGL A;  1VQ4 P;  3CCS P;  1KQS O;  3EJE A;  4QNB A;  1YIJ P;  4QKO A;  2KOQ A;  1HQB A;  2OTJ P;  3RG2 A;  3DTJ A;  1RNI A;  2PEK A;  1QVF O;  1ZNV A;  2GDY A;  2K5X A;  2MR8 A;  1IMP A;  1QRJ A;  3M1M A;  4BPF A;  1YJN P;  4COP A;  1M6N A;  5F2O A;  5BS1 A;  2AFE A;  2PEO A;  2FVA A;  1Q86 Q;  2ERH A;  3CE7 A;  3CXC O;  1GPJ A;  2OTL P;  2MVU A;  2PEJ A;  4PH0 A;  3CCU P;  3G29 A;  3CCJ P;  3DS2 A;  1A43 A;  4MRT C;  2LKI A;  4U0E A;  1IUQ A;  4XFX A;  4HKG A;  1JJ2 O;  2LML A;  2JB0 A;  4XFZ A;  3GKL C;  3DPH A;  4U0A A;  2AF8 A;  3OW2 O;  2N5H A;  3EJB A;  4U0F A;  2LTE A;  2FVE A;  3RG6 C;  2VSQ A;  2EG5 A;  2KOS A;  3EJD A;  3VRL C;  1NQ4 A;  2JBG A;  2VLQ A;  2DGY A;  2LF4 A;  5CZD B;  2KR5 A;  3Q20 A;  3MGE A;  2PY8 A;  1UJZ A;  1AYI A;  2XZ0 D;  2MY5 A;  2FHS C;  3CCM P;  2FVF A;  5HGO A;  3CD6 P;  3DS1 A;  1MZ8 A;  2MF4 A;  1VQM P;  5I4T G;  3G4S P;  4WYM A;  1VQ5 P;  3I56 P;  3DS3 A;  1M1K Q;  3I55 P;  1VKU A;  2K0Y A;  2PEN A;  1Q82 Q;  3LRY A;  2VLP A;  1KLP A;  3GJN A;  2N5I A;  2N98 A;  2KGA A;  1QVG O;  1GXH A;  3G1G A;  2N50 A;  4R0M A;  1VQO P;  2X2B A;  2CWO A;  2LIU A;  1VQK P;  1L0H A;  3CCV P;  3H0D A;  1VQP P;  5HGN A;  4H2W C;  2QEX P;  2XV6 A;  4XRQ A;  3DS4 A;  2P9X A;  2GZF A;  2L0Q A;  1YIT P;  2LL8 A;  2CNR A;  1M90 Q;  1BAJ A;  2WPT A;  2QA4 P;  5HVC A;  1GXG A;  3CMA P;  2GZI A;  2ROQ A;  3B5I A;  1ZMB A;  4XFY A;  1VQL P;  3CME P;  1VQ7 P;  2GZG A;  2K93 A;  5HGM A;  2KOO A;  2K2Q A;  1IMQ A;  4U0C A;  2EHT A;  5EJD A;  1KC8 Q;  2AFD A;  3CC2 P;  1X3O A;  2KGC A;  1AF8 A;  2KOD A;  5DCK A;  1M74 A;  2CQ8 A;  2EFJ A;  1T8K A;  2K92 A;  2XXM A;  5HV8 A;  1K8A Q;  2Z46 A;  3HYB A;  4M0I A;  4BPG A;  2FQ2 A;  4PH1 A;  2LIW A;  1UNK A;  4BPH A;  3CC7 P;  2PNG A;  3GZL A;  1NJI Q;  1A8O A;  1Z6M A;  1AUM A;  2KW2 A;  3CCR P;  3NY7 B;  4PWV B;  2N6Y A;  2LPK A;  1DV5 A;  2EHS A;  3G71 P;  2OAR A;  1YHQ P;  3G26 A;  1S72 P;  5JPA A;  2KG8 A;  3HZQ A;  2JAZ A;  1Q7Y Q;  2K0X A;  2L22 A;  2GDW A;  2JGP A;  1VQ6 P;  3H47 A;  1ACP A;  2FAD A;  2BHV A;  4DG9 A;  1VQN P;  4IPY A;  1F80 D;  1CEI A;  1YJ9 P;  1W2B O;  4H2X C;  2VLN A;  2XZ1 C;  3DS0 A;  4U0D A;  2KG9 A;  1K30 A;  2JO0 A;  3G28 A;  3LMO A;  1L0I A;  2MR7 A;  3B4Q A;  2CGQ A;  1EMV A;  3G1I A;  4CA3 A;  1K73 Q;  2JQ4 A;  1N8R Q;  1DNY A;  1D1D A;  4GR6 A;  3NTE A;  2FAE A;  1M6E X;  5F2N A;  2L6E A;  3CC4 P;  2MD9 A;  1E6J P;  2KOR A;  5KP6 B;  2KOP A;  2JU1 A; 
#chains in the Genus database with same CATH homology
 4NEO A;  2KR5 A;  2N6Z A;  2JU2 A;  2XZ0 D;  2MY5 A;  5HV8 A;  2FHS C;  2LOL A;  2KG6 A;  2FQ1 A;  2FVF A;  2CG5 B;  2L9F A;  4BPG A;  2FQ2 A;  5KP7 B;  2MF4 A;  2AVA A;  3GZM A;  2LIW A;  4BPH A;  3EJE A;  2QNW A;  2PNG A;  3GZL A;  2M5R A;  1HY8 A;  2KW2 A;  2KOQ A;  1VKU A;  1HQB A;  3RG2 A;  3NY7 B;  4PWV B;  2K0Y A;  2K94 A;  2LPK A;  2N6Y A;  2DNW A;  2FQ0 A;  1DV5 A;  2GDY A;  2FAC A;  2EHS A;  5KP8 B;  2MR8 A;  4IZ6 A;  1KLP A;  4BPF A;  2KG8 A;  2N5I A;  2K0X A;  2N98 A;  2AFE A;  2KGA A;  2FVA A;  2L22 A;  2GDW A;  2JGP A;  2N50 A;  2KWL A;  3CE7 A;  2MVV A;  1ACP A;  4R0M A;  2FAD A;  2MVU A;  2X2B A;  2LIU A;  1L0H A;  4DG9 A;  2KGE A;  1F80 D;  2KGD A;  4H2W C;  4MRT C;  2LKI A;  4H2X C;  4HKG A;  2XZ1 C;  2LML A;  2L0Q A;  2KG9 A;  2LL8 A;  2CNR A;  3LMO A;  1L0I A;  2MR7 A;  2GDX A;  2CGQ A;  5HVC A;  2AF8 A;  2N5H A;  3EJB A;  4CA3 A;  2ROQ A;  4PXH B;  2L4B A;  2LTE A;  2K93 A;  2JQ4 A;  4H2Y C;  2FVE A;  2KOO A;  2K2Q A;  2VSQ A;  1DNY A;  2FAE A;  2EHT A;  5EJD A;  2AFD A;  1X3O A;  2KGC A;  2KOS A;  3EJD A;  1AF8 A;  1NQ4 A;  2MD9 A;  2KOR A;  2CQ8 A;  5CZD B;  2K92 A;  1T8K A;  2KOP A;  5KP6 B;  1OR5 A;  2JU1 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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