2K0XA

The actinorhodin holo acyl carrier protein from s. coelicolor
Total Genus 23
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
23
sequence length
86
structure length
86
Chain Sequence
MATLLTTDDLRRALVESAGETDGTDLSGDFLDLRFEDIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLINGALAEAA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title An ACP Structural Switch: Conformational Differences between the Apo and Holo Forms of the Actinorhodin Polyketide Synthase Acyl Carrier Protein.
pubmed doi rcsb
source organism Streptomyces coelicolor
molecule tags Transport protein
molecule keywords Actinorhodin polyketide synthase acyl carrier protein
total genus 23
structure length 86
sequence length 86
ec nomenclature
pdb deposition date 2008-02-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2k0xA00
2GDYA 2CNRA 2MVUA 2LIUA 2KOOA 1X3OA 2KGCA 4CA3A 2K0YA 4IZ6A 4PXHB 2L9FA 2JU2A 2MF4A 1F80D 2AF8A 1DV5A 3NY7B 5KP7B 2KW2A 2PNGA 2MVVA 2LTEA 3GZMA 3CE7A 2KG6A 1L0IA 4NEOA 2MD9A 2FQ2A 4R0MA 2MR8A 2LKIA 2FVAA 5EJDA 2ROQA 5CZDB 1AF8A 2LPKA 2FVEA 2K93A 4PWVB 2KG9A 5HV8A 2GDXA 2N5IA 1T8KA 3RG2A 1L0HA 2VSQA 2K94A 2CGQA 2JU1A 4H2WC 2JGPA 2LIWA 2JQ4A 1NQ4A 2QNWA 2AVAA 2KOQA 2MY5A 2X2BA 2K2QA 1HY8A 5KP8B 4DG9A 2KGDA 2LOLA 2GDWA 2KGEA 1VKUA 2CG5B 2M5RA 2AFEA 2N5HA 2N50A 1KLPA 3LMOA 2EHTA 2N6ZA 2EHSA 2L0QA 4HKGA 2LL8A 1OR5A 2KOSA 4BPGA 5KP6B 1HQBA 2CQ8A 2K92A 2FVFA 3EJEA 2KWLA 4MRTC 3GZLA 2FQ1A 4H2YC 2XZ0D 3EJDA 2K0XA 2KORA 1DNYA 2MR7A 5HVCA 2L22A 2N6YA 2FAEA 2XZ1C 2FHSC 2L4BA 2AFDA 1ACPA 2DNWA 2FACA 2N98A 2FQ0A 4BPFA 4H2XC 2KOPA 2LMLA 3EJBA 2KR5A 2FADA 2KGAA 4BPHA 2KG8A
chains in the Genus database with same CATH superfamily
3CCVP 2VLOA 3WBHA 1M74A 1EMVA 3G29A 1VQMP 4WYMA 2GYKA 2Z46A 2GZGA 1F80D 2AF8A 2PEIA 3NY7B 4XROA 1Q7YQ 3GKLC 3OW2O 2MVVA 3GZMA 3CE7A 4NEOA 2PEJA 2OTLP 2LKIA 5CZDB 2ROQA 4XFZA 5I4TG 5F2OA 2K93A 4PWVB 3M1MA 5HGMA 1IMPA 3U43A 3RG2A 4GR2A 2ONTA 1RO0A 2JQ4A 1NQ4A 2QNWA 2AVAA 2QEXP 2K2QA 7CEIA 1VQ7P 1Q82Q 2N50A 2Z45A 1KLPA 3CD6P 3CCEP 2N6ZA 2L0QA 5BS2A 2JBGA 5KP6B 5F2NA 2CQ8A 2K92A 5HGNA 1QRJA 3H4EA 2VLPA 4XRQA 1E6JP 2K0XA 2ERHA 4UHPB 2EIAA 2GZJA 1YJ9P 3G26A 2L22A 2VLNA 2XZ1C 3G21A 4COPA 2AFDA 1AYIA 3H47A 2OTJP 1M6NA 4U0AA 2PEOA 4GR6A 3CC4P 3B4QA 2LMLA 3CXCO 1D1DA 2BHVA 1M6EX 2GDYA 2CNRA 4U0FA 1VQNP 2NO8A 1K73Q 4CA3A 2GZFA 2K0YA 4PXHB 1VQ4P 2MF4A 3I56P 3CMEP 2XV6A 2K0DX 2FQ2A 2PY8A 3LRYA 1M1KQ 1YJNP 2FVEA 3CMAP 1VQLP 2N5IA 1ZMBA 1L0HA 3HZQA 2K94A 3RG6C 2JU1A 2JGPA 2PENA 1YIJP 1BAJA 2KOQA 5BS1A 1HY8A 1YI2P 1VQKP 5HGLA 2GZEA 1YHQP 2JO0A 1VKUA 2XT1A 2AFEA 1VQOP 3G4SP 4U0CA 3LMOA 2EHTA 1GXHA 3CCRP 3CCMP 2EHSA 3CCLP 1KD1Q 2OARA 4BPGA 4F37A 4XFYA 2PEKA 2VLQA 3Q20A 3I55P 1IMQA 3GZLA 3CCQP 1Q81Q 1K9MQ 3EJDA 1RO2A 1VQ6P 3CCSP 1GXGA 2N6YA 2FAEA 5EW5E 2FHSC 4XFXA 1QVGO 1UNKA 1VQ5P 3G0VA 2M8LA 2KOPA 2KR5A 2FADA 2KGAA 4QNBA 3DTJA 4BPHA 1A43A 2KG8A 1EIAA 3CCJP 5JPAA 2LIUA 2KOOA 2KGCA 1MZ8A 4IZ6A 2KODA 2PEMA 2L9FA 1Q86Q 1DV5A 1VQ9P 3DS2A 2KW2A 2PNGA 2L6EA 2LF4A 1A8OA 2MD9A 1M90Q 2EFJA 3DS0A 5EJDA 1AUMA 2LPKA 3G71P 2KG9A 1S72P 3HYBA 5HV8A 2CGQA 4M0IA 4H2WC 3G28A 1CEIA 2MY5A 1Z6MA 2X2BA 3CC2P 1VHNA 5KP8B 4QKOA 4PH0A 4DG9A 2LOLA 3G1GA 2GDWA 4U0BA 1KC8Q 2QA4P 2CG5B 2M5RA 3NTEA 4PH1A 1E0HA 2JAZA 1K30A 1BXIA 4HKGA 3E2DA 3CCUP 1N8RQ 2P9XA 1W2BO 1K8AQ 2KWLA 4MRTC 1YITP 5DCKA 2XZ0D 1DNYA 1EOQA 4COCA 4IPYA 5F2KA 2WPTA 3GJNA 2FQ0A 3VRLC 4H2XC 2MVUA 1X3OA 4U0EA 2XXMA 3P05A 1RNIA 2JU2A 1KQSO 2PEQA 2JB0A 5KP7B 1JJ2O 2LTEA 2KG6A 1L0IA 2GZIA 4U0DA 4R0MA 2MR8A 2FVAA 3G1IA 1AF8A 3H0DA 3DPHA 2GDXA 3CC7P 1T8KA 3DS4A 2VSQA 1GPJA 2LIWA 2E1MA 3MGEA 3B5IA 2KGDA 1NJIQ 2KGEA 2M8NA 2N5HA 1QVFO 5HGOA 2EG5A 3G6EP 2JYLA 2M8PA 2LL8A 1OR5A 2KOSA 1UJZA 1HQBA 3DS5A 1IUQA 2FVFA 3EJEA 1YJWP 1ZNVA 2JYGA 2FQ1A 4H2YC 2KORA 1FR2A 2DGYA 2MR7A 5HVCA 1VQ8P 2K5XA 2L4BA 1ACPA 2Z44A 2CWOA 2DNWA 3DS3A 2FACA 2N98A 4BPFA 3EJBA 2BUOA 3DS1A 3CPWO 1VQPP
chains in the Genus database with same CATH topology
2GDYA 2CNRA 2MVUA 2LIUA 2KOOA 1X3OA 2KGCA 4CA3A 2K0YA 4IZ6A 4PXHB 2L9FA 2JU2A 2MF4A 1F80D 2AF8A 1DV5A 3NY7B 5KP7B 2KW2A 2PNGA 2MVVA 2LTEA 3GZMA 3CE7A 2KG6A 1L0IA 4NEOA 2MD9A 2FQ2A 4R0MA 2MR8A 2LKIA 2FVAA 5EJDA 2ROQA 5CZDB 1AF8A 2LPKA 2FVEA 2K93A 4PWVB 2KG9A 5HV8A 2GDXA 2N5IA 1T8KA 3RG2A 1L0HA 2VSQA 2K94A 2CGQA 2JU1A 4H2WC 2JGPA 2LIWA 2JQ4A 1NQ4A 2QNWA 2AVAA 2KOQA 2MY5A 2X2BA 2K2QA 1HY8A 5KP8B 4DG9A 2KGDA 2LOLA 2GDWA 2KGEA 1VKUA 2CG5B 2M5RA 2AFEA 2N5HA 2N50A 1KLPA 3LMOA 2EHTA 2N6ZA 2EHSA 2L0QA 4HKGA 2LL8A 1OR5A 2KOSA 4BPGA 5KP6B 1HQBA 2CQ8A 2K92A 2FVFA 3EJEA 2KWLA 4MRTC 3GZLA 2FQ1A 4H2YC 2XZ0D 3EJDA 2K0XA 2KORA 1DNYA 2MR7A 5HVCA 2L22A 2N6YA 2FAEA 2XZ1C 2FHSC 2L4BA 2AFDA 1ACPA 2DNWA 2FACA 2N98A 2FQ0A 4BPFA 4H2XC 2KOPA 2LMLA 3EJBA 2KR5A 2FADA 2KGAA 4BPHA 2KG8A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2GDY A;  2CNR A;  2MVU A;  2LIU A;  2KOO A;  1X3O A;  2KGC A;  4CA3 A;  2K0Y A;  4IZ6 A;  4PXH B;  2L9F A;  2JU2 A;  2MF4 A;  1F80 D;  2AF8 A;  1DV5 A;  3NY7 B;  5KP7 B;  2KW2 A;  2PNG A;  2MVV A;  2LTE A;  3GZM A;  3CE7 A;  2KG6 A;  1L0I A;  4NEO A;  2MD9 A;  2FQ2 A;  4R0M A;  2MR8 A;  2LKI A;  2FVA A;  5EJD A;  2ROQ A;  5CZD B;  1AF8 A;  2LPK A;  2FVE A;  2K93 A;  4PWV B;  2KG9 A;  5HV8 A;  2GDX A;  2N5I A;  1T8K A;  3RG2 A;  1L0H A;  2VSQ A;  2K94 A;  2CGQ A;  2JU1 A;  4H2W C;  2JGP A;  2LIW A;  2JQ4 A;  1NQ4 A;  2QNW A;  2AVA A;  2KOQ A;  2MY5 A;  2X2B A;  2K2Q A;  1HY8 A;  5KP8 B;  4DG9 A;  2KGD A;  2LOL A;  2GDW A;  2KGE A;  1VKU A;  2CG5 B;  2M5R A;  2AFE A;  2N5H A;  2N50 A;  1KLP A;  3LMO A;  2EHT A;  2N6Z A;  2EHS A;  2L0Q A;  4HKG A;  2LL8 A;  1OR5 A;  2KOS A;  4BPG A;  5KP6 B;  1HQB A;  2CQ8 A;  2K92 A;  2FVF A;  3EJE A;  2KWL A;  4MRT C;  3GZL A;  2FQ1 A;  4H2Y C;  2XZ0 D;  3EJD A;  2K0X A;  2KOR A;  1DNY A;  2MR7 A;  5HVC A;  2L22 A;  2N6Y A;  2FAE A;  2XZ1 C;  2FHS C;  2L4B A;  2AFD A;  1ACP A;  2DNW A;  2FAC A;  2N98 A;  2FQ0 A;  4BPF A;  4H2X C;  2KOP A;  2LML A;  3EJB A;  2KR5 A;  2FAD A;  2KGA A;  4BPH A;  2KG8 A; 
#chains in the Genus database with same CATH topology
 3CCV P;  2VLO A;  3WBH A;  1M74 A;  1EMV A;  3G29 A;  1VQM P;  4WYM A;  2GYK A;  2Z46 A;  2GZG A;  1F80 D;  2AF8 A;  2PEI A;  3NY7 B;  4XRO A;  1Q7Y Q;  3GKL C;  3OW2 O;  2MVV A;  3GZM A;  3CE7 A;  4NEO A;  2PEJ A;  2OTL P;  2LKI A;  5CZD B;  2ROQ A;  4XFZ A;  5I4T G;  5F2O A;  2K93 A;  4PWV B;  3M1M A;  5HGM A;  1IMP A;  3U43 A;  3RG2 A;  4GR2 A;  2ONT A;  1RO0 A;  2JQ4 A;  1NQ4 A;  2QNW A;  2AVA A;  2QEX P;  2K2Q A;  7CEI A;  1VQ7 P;  1Q82 Q;  2N50 A;  2Z45 A;  1KLP A;  3CD6 P;  3CCE P;  2N6Z A;  2L0Q A;  5BS2 A;  2JBG A;  5KP6 B;  5F2N A;  2CQ8 A;  2K92 A;  5HGN A;  1QRJ A;  3H4E A;  2VLP A;  4XRQ A;  1E6J P;  2K0X A;  2ERH A;  4UHP B;  2EIA A;  2GZJ A;  1YJ9 P;  3G26 A;  2L22 A;  2VLN A;  2XZ1 C;  3G21 A;  4COP A;  2AFD A;  1AYI A;  3H47 A;  2OTJ P;  1M6N A;  4U0A A;  2PEO A;  4GR6 A;  3CC4 P;  3B4Q A;  2LML A;  3CXC O;  1D1D A;  2BHV A;  1M6E X;  2GDY A;  2CNR A;  4U0F A;  1VQN P;  2NO8 A;  1K73 Q;  4CA3 A;  2GZF A;  2K0Y A;  4PXH B;  1VQ4 P;  2MF4 A;  3I56 P;  3CME P;  2XV6 A;  2K0D X;  2FQ2 A;  2PY8 A;  3LRY A;  1M1K Q;  1YJN P;  2FVE A;  3CMA P;  1VQL P;  2N5I A;  1ZMB A;  1L0H A;  3HZQ A;  2K94 A;  3RG6 C;  2JU1 A;  2JGP A;  2PEN A;  1YIJ P;  1BAJ A;  2KOQ A;  5BS1 A;  1HY8 A;  1YI2 P;  1VQK P;  5HGL A;  2GZE A;  1YHQ P;  2JO0 A;  1VKU A;  2XT1 A;  2AFE A;  1VQO P;  3G4S P;  4U0C A;  3LMO A;  2EHT A;  1GXH A;  3CCR P;  3CCM P;  2EHS A;  3CCL P;  1KD1 Q;  2OAR A;  4BPG A;  4F37 A;  4XFY A;  2PEK A;  2VLQ A;  3Q20 A;  3I55 P;  1IMQ A;  3GZL A;  3CCQ P;  1Q81 Q;  1K9M Q;  3EJD A;  1RO2 A;  1VQ6 P;  3CCS P;  1GXG A;  2N6Y A;  2FAE A;  5EW5 E;  2FHS C;  4XFX A;  1QVG O;  1UNK A;  1VQ5 P;  3G0V A;  2M8L A;  2KOP A;  2KR5 A;  2FAD A;  2KGA A;  4QNB A;  3DTJ A;  4BPH A;  1A43 A;  2KG8 A;  1EIA A;  3CCJ P;  5JPA A;  2LIU A;  2KOO A;  2KGC A;  1MZ8 A;  4IZ6 A;  2KOD A;  2PEM A;  2L9F A;  1Q86 Q;  1DV5 A;  1VQ9 P;  3DS2 A;  2KW2 A;  2PNG A;  2L6E A;  2LF4 A;  1A8O A;  2MD9 A;  1M90 Q;  2EFJ A;  3DS0 A;  5EJD A;  1AUM A;  2LPK A;  3G71 P;  2KG9 A;  1S72 P;  3HYB A;  5HV8 A;  2CGQ A;  4M0I A;  4H2W C;  3G28 A;  1CEI A;  2MY5 A;  1Z6M A;  2X2B A;  3CC2 P;  1VHN A;  5KP8 B;  4QKO A;  4PH0 A;  4DG9 A;  2LOL A;  3G1G A;  2GDW A;  4U0B A;  1KC8 Q;  2QA4 P;  2CG5 B;  2M5R A;  3NTE A;  4PH1 A;  1E0H A;  2JAZ A;  1K30 A;  1BXI A;  4HKG A;  3E2D A;  3CCU P;  1N8R Q;  2P9X A;  1W2B O;  1K8A Q;  2KWL A;  4MRT C;  1YIT P;  5DCK A;  2XZ0 D;  1DNY A;  1EOQ A;  4COC A;  4IPY A;  5F2K A;  2WPT A;  3GJN A;  2FQ0 A;  3VRL C;  4H2X C;  2MVU A;  1X3O A;  4U0E A;  2XXM A;  3P05 A;  1RNI A;  2JU2 A;  1KQS O;  2PEQ A;  2JB0 A;  5KP7 B;  1JJ2 O;  2LTE A;  2KG6 A;  1L0I A;  2GZI A;  4U0D A;  4R0M A;  2MR8 A;  2FVA A;  3G1I A;  1AF8 A;  3H0D A;  3DPH A;  2GDX A;  3CC7 P;  1T8K A;  3DS4 A;  2VSQ A;  1GPJ A;  2LIW A;  2E1M A;  3MGE A;  3B5I A;  2KGD A;  1NJI Q;  2KGE A;  2M8N A;  2N5H A;  1QVF O;  5HGO A;  2EG5 A;  3G6E P;  2JYL A;  2M8P A;  2LL8 A;  1OR5 A;  2KOS A;  1UJZ A;  1HQB A;  3DS5 A;  1IUQ A;  2FVF A;  3EJE A;  1YJW P;  1ZNV A;  2JYG A;  2FQ1 A;  4H2Y C;  2KOR A;  1FR2 A;  2DGY A;  2MR7 A;  5HVC A;  1VQ8 P;  2K5X A;  2L4B A;  1ACP A;  2Z44 A;  2CWO A;  2DNW A;  3DS3 A;  2FAC A;  2N98 A;  4BPF A;  3EJB A;  2BUO A;  3DS1 A;  3CPW O;  1VQP P; 
#chains in the Genus database with same CATH homology
 2GDY A;  2CNR A;  2MVU A;  2LIU A;  2KOO A;  1X3O A;  2KGC A;  4CA3 A;  2K0Y A;  4IZ6 A;  4PXH B;  2L9F A;  2JU2 A;  2MF4 A;  1F80 D;  2AF8 A;  1DV5 A;  3NY7 B;  5KP7 B;  2KW2 A;  2PNG A;  2MVV A;  2LTE A;  3GZM A;  3CE7 A;  2KG6 A;  1L0I A;  4NEO A;  2MD9 A;  2FQ2 A;  4R0M A;  2MR8 A;  2LKI A;  2FVA A;  5EJD A;  2ROQ A;  5CZD B;  1AF8 A;  2LPK A;  2FVE A;  2K93 A;  4PWV B;  2KG9 A;  5HV8 A;  2GDX A;  2N5I A;  1T8K A;  3RG2 A;  1L0H A;  2VSQ A;  2K94 A;  2CGQ A;  2JU1 A;  4H2W C;  2JGP A;  2LIW A;  2JQ4 A;  1NQ4 A;  2QNW A;  2AVA A;  2KOQ A;  2MY5 A;  2X2B A;  2K2Q A;  1HY8 A;  5KP8 B;  4DG9 A;  2KGD A;  2LOL A;  2GDW A;  2KGE A;  1VKU A;  2CG5 B;  2M5R A;  2AFE A;  2N5H A;  2N50 A;  1KLP A;  3LMO A;  2EHT A;  2N6Z A;  2EHS A;  2L0Q A;  4HKG A;  2LL8 A;  1OR5 A;  2KOS A;  4BPG A;  5KP6 B;  1HQB A;  2CQ8 A;  2K92 A;  2FVF A;  3EJE A;  2KWL A;  4MRT C;  3GZL A;  2FQ1 A;  4H2Y C;  2XZ0 D;  3EJD A;  2K0X A;  2KOR A;  1DNY A;  2MR7 A;  5HVC A;  2L22 A;  2N6Y A;  2FAE A;  2XZ1 C;  2FHS C;  2L4B A;  2AFD A;  1ACP A;  2DNW A;  2FAC A;  2N98 A;  2FQ0 A;  4BPF A;  4H2X C;  2KOP A;  2LML A;  3EJB A;  2KR5 A;  2FAD A;  2KGA A;  4BPH A;  2KG8 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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