2K0XA

The actinorhodin holo acyl carrier protein from s. coelicolor
Total Genus 23
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
23
sequence length
86
structure length
86
Chain Sequence
MATLLTTDDLRRALVESAGETDGTDLSGDFLDLRFEDIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLINGALAEAA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title An ACP Structural Switch: Conformational Differences between the Apo and Holo Forms of the Actinorhodin Polyketide Synthase Acyl Carrier Protein.
pubmed doi rcsb
source organism Streptomyces coelicolor
molecule tags Transport protein
molecule keywords Actinorhodin polyketide synthase acyl carrier protein
total genus 23
structure length 86
sequence length 86
ec nomenclature
pdb deposition date 2008-02-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2k0xA00
2AVAA 2KGAA 2N6YA 2L0QA 5KP8B 1L0IA 2N98A 2FVAA 3RG2A 4BPFA 2KOOA 2K2QA 2CG5B 2KR5A 4HKGA 2CNRA 2FACA 2FADA 3CE7A 2MR7A 3EJEA 1KLPA 2QNWA 4MRTC 2DNWA 1F80D 4CA3A 2GDXA 3EJBA 1T8KA 2MVVA 2FHSC 1L0HA 2M5RA 3LMOA 2X2BA 5KP7B 4NEOA 1NQ4A 2N5IA 2KORA 2CQ8A 2MR8A 2K0XA 2VSQA 3GZLA 2XZ0D 1HY8A 2LL8A 2MF4A 2KGCA 2FVFA 2XZ1C 2N5HA 1X3OA 2AF8A 2K92A 2KG6A 2GDWA 5CZDB 2EHTA 2LMLA 1OR5A 2K0YA 2KW2A 3EJDA 3GZMA 2AFEA 4H2XC 2PNGA 4DG9A 2LTEA 2JQ4A 2AFDA 2ROQA 2KGEA 2GDYA 1AF8A 2L9FA 5EJDA 2EHSA 4PWVB 5KP6B 2L22A 4BPGA 2N6ZA 2K94A 2LPKA 2LIUA 4H2WC 2JU1A 2FQ1A 4H2YC 2K93A 2FQ0A 2KOSA 2KOQA 2LIWA 2MD9A 1ACPA 4IZ6A 2LKIA 2KWLA 1HQBA 5HVCA 2FVEA 2KG9A 2CGQA 2JGPA 1VKUA 2MVUA 2KGDA 2L4BA 2MY5A 3NY7B 5HV8A 1DNYA 2JU2A 4R0MA 2N50A 4BPHA 1DV5A 2KOPA 4PXHB 2FQ2A 2KG8A 2LOLA 2FAEA
chains in the Genus database with same CATH superfamily
1FR2A 2KGAA 1QVFO 5KP8B 2FVAA 1K30A 4BPFA 3DS3A 2K2QA 2FADA 4PH1A 3CE7A 1VQPP 4MRTC 2JO0A 2DNWA 1F80D 3DS4A 1T8KA 2FHSC 2OTLP 4U0AA 2EIAA 1UNKA 1M74A 1NQ4A 3CD6P 2N5IA 3RG6C 2K0XA 3GZLA 2XZ0D 1QVGO 1HY8A 1BAJA 2KGCA 1A43A 1Q82Q 3E2DA 2QA4P 1OR5A 4UHPB 2AFEA 2GZFA 2ERHA 1E0HA 2GDYA 2XV6A 3CCUP 2EHSA 2K94A 2LPKA 2PEMA 3DS2A 1RO2A 2K93A 2FQ0A 2KOSA 3G21A 2LIWA 1HQBA 5HVCA 3CCEP 2KG9A 5DCKA 3CCMP 3CC2P 1YJWP 2JGPA 3OW2O 2NO8A 3CCQP 4R0MA 2GYKA 3CCSP 1DV5A 3CMAP 2KOPA 4PXHB 1VHNA 2KODA 1ZMBA 2LOLA 1YJ9P 3WBHA 2PENA 1L0IA 1K8AQ 3RG2A 2CG5B 2FACA 1KLPA 2QNWA 2JB0A 1GPJA 3DPHA 1M1KQ 3DS0A 4GR2A 3EJBA 3NTEA 3G6EP 1YJNP 4XFZA 3G26A 4WYMA 3LMOA 2X2BA 4U0FA 1VQ7P 4U0EA 2M8NA 4NEOA 2CWOA 1VQ9P 1BXIA 5JPAA 2PEJA 2LL8A 2GZGA 1X3OA 1K73Q 2AF8A 2BUOA 2KG6A 5F2NA 2LMLA 2Z44A 2KW2A 3EJDA 2JYGA 4COCA 2LTEA 1D1DA 1YIJP 2KGEA 3HZQA 5BS1A 4COPA 1YITP 2GZIA 5KP6B 2GZJA 2L22A 4BPGA 2WPTA 3MGEA 3U43A 4H2YC 2KOQA 5EW5E 1NJIQ 4IZ6A 3CXCO 1KQSO 3LRYA 4QNBA 1A8OA 1YI2P 2MVUA 2ONTA 2KGDA 2L4BA 2VLNA 5HV8A 3H0DA 1DNYA 2JU2A 4F37A 1S72P 1Z6MA 5BS2A 2KG8A 2Z45A 5HGOA 2K5XA 2XT1A 2AVAA 2PEOA 2KOOA 2OTJP 4HKGA 2CNRA 1JJ2O 2MR7A 3EJEA 2PEKA 4CA3A 3B4QA 5F2KA 2GDXA 5HGNA 2K0DX 2MVVA 5F2OA 1VQLP 2M5RA 1AUMA 2VLQA 2VLOA 5KP7B 3CC7P 3DS1A 2KORA 2CQ8A 2JBGA 1VQ4P 2JAZA 3G29A 2E1MA 1E6JP 5HGLA 2MF4A 2XXMA 2FVFA 2N5HA 2K92A 1IUQA 3CPWO 3CCJP 2K0YA 3DS5A 2PNGA 4U0DA 2OARA 2JQ4A 3G0VA 1AF8A 1QRJA 2N6ZA 1KD1Q 2LIUA 4H2WC 4XFXA 2JU1A 3GKLC 2FQ1A 1VQ5P 2PEQA 1EIAA 2M8LA 2MD9A 1IMPA 2KWLA 3I56P 2CGQA 1GXGA 1AYIA 3HYBA 1VKUA 3G1GA 2MY5A 2LF4A 1VQKP 1KC8Q 2EG5A 4XRQA 2FQ2A 3M1MA 1N8RQ 3CCVP 2N6YA 2L0QA 2N98A 2KR5A 3H47A 3H4EA 2Z46A 5HGMA 1RO0A 3Q20A 1VQ8P 1IMQA 2QEXP 2EFJA 3GJNA 1M6NA 2GZEA 2P9XA 3G1IA 1L0HA 1ZNVA 1VQOP 1Q81Q 2DGYA 2BHVA 1RNIA 1YHQP 4GR6A 2MR8A 1VQMP 3I55P 1GXHA 2VSQA 1W2BO 4PH0A 1CEIA 7CEIA 1VQNP 2XZ1C 1M6EX 2GDWA 5CZDB 2EHTA 3GZMA 1UJZA 4H2XC 1EMVA 2L6EA 1K9MQ 4DG9A 3P05A 3CCLP 1VQ6P 2AFDA 2ROQA 4IPYA 1M90Q 3DTJA 2PY8A 2L9FA 5EJDA 4PWVB 4XFYA 2M8PA 2PEIA 2VLPA 4U0CA 3G4SP 2LKIA 1ACPA 4U0BA 2FVEA 3CC4P 1MZ8A 4QKOA 1Q7YQ 3CMEP 4XROA 3G28A 3NY7B 1Q86Q 4M0IA 2JYLA 3G71P 5I4TG 3CCRP 2N50A 3VRLC 4BPHA 1EOQA 2FAEA 3B5IA
chains in the Genus database with same CATH topology
2AVAA 2KGAA 2N6YA 2L0QA 5KP8B 1L0IA 2N98A 2FVAA 3RG2A 4BPFA 2KOOA 2K2QA 2CG5B 2KR5A 4HKGA 2CNRA 2FACA 2FADA 3CE7A 2MR7A 3EJEA 1KLPA 2QNWA 4MRTC 2DNWA 1F80D 4CA3A 2GDXA 3EJBA 1T8KA 2MVVA 2FHSC 1L0HA 2M5RA 3LMOA 2X2BA 5KP7B 4NEOA 1NQ4A 2N5IA 2KORA 2CQ8A 2MR8A 2K0XA 2VSQA 3GZLA 2XZ0D 1HY8A 2LL8A 2MF4A 2KGCA 2FVFA 2XZ1C 2N5HA 1X3OA 2AF8A 2K92A 2KG6A 2GDWA 5CZDB 2EHTA 2LMLA 1OR5A 2K0YA 2KW2A 3EJDA 3GZMA 2AFEA 4H2XC 2PNGA 4DG9A 2LTEA 2JQ4A 2AFDA 2ROQA 2KGEA 2GDYA 1AF8A 2L9FA 5EJDA 2EHSA 4PWVB 5KP6B 2L22A 4BPGA 2N6ZA 2K94A 2LPKA 2LIUA 4H2WC 2JU1A 2FQ1A 4H2YC 2K93A 2FQ0A 2KOSA 2KOQA 2LIWA 2MD9A 1ACPA 4IZ6A 2LKIA 2KWLA 1HQBA 5HVCA 2FVEA 2KG9A 2CGQA 2JGPA 1VKUA 2MVUA 2KGDA 2L4BA 2MY5A 3NY7B 5HV8A 1DNYA 2JU2A 4R0MA 2N50A 4BPHA 1DV5A 2KOPA 4PXHB 2FQ2A 2KG8A 2LOLA 2FAEA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2AVA A;  2KGA A;  2N6Y A;  2L0Q A;  5KP8 B;  1L0I A;  2N98 A;  2FVA A;  3RG2 A;  4BPF A;  2KOO A;  2K2Q A;  2CG5 B;  2KR5 A;  4HKG A;  2CNR A;  2FAC A;  2FAD A;  3CE7 A;  2MR7 A;  3EJE A;  1KLP A;  2QNW A;  4MRT C;  2DNW A;  1F80 D;  4CA3 A;  2GDX A;  3EJB A;  1T8K A;  2MVV A;  2FHS C;  1L0H A;  2M5R A;  3LMO A;  2X2B A;  5KP7 B;  4NEO A;  1NQ4 A;  2N5I A;  2KOR A;  2CQ8 A;  2MR8 A;  2K0X A;  2VSQ A;  3GZL A;  2XZ0 D;  1HY8 A;  2LL8 A;  2MF4 A;  2KGC A;  2FVF A;  2XZ1 C;  2N5H A;  1X3O A;  2AF8 A;  2K92 A;  2KG6 A;  2GDW A;  5CZD B;  2EHT A;  2LML A;  1OR5 A;  2K0Y A;  2KW2 A;  3EJD A;  3GZM A;  2AFE A;  4H2X C;  2PNG A;  4DG9 A;  2LTE A;  2JQ4 A;  2AFD A;  2ROQ A;  2KGE A;  2GDY A;  1AF8 A;  2L9F A;  5EJD A;  2EHS A;  4PWV B;  5KP6 B;  2L22 A;  4BPG A;  2N6Z A;  2K94 A;  2LPK A;  2LIU A;  4H2W C;  2JU1 A;  2FQ1 A;  4H2Y C;  2K93 A;  2FQ0 A;  2KOS A;  2KOQ A;  2LIW A;  2MD9 A;  1ACP A;  4IZ6 A;  2LKI A;  2KWL A;  1HQB A;  5HVC A;  2FVE A;  2KG9 A;  2CGQ A;  2JGP A;  1VKU A;  2MVU A;  2KGD A;  2L4B A;  2MY5 A;  3NY7 B;  5HV8 A;  1DNY A;  2JU2 A;  4R0M A;  2N50 A;  4BPH A;  1DV5 A;  2KOP A;  4PXH B;  2FQ2 A;  2KG8 A;  2LOL A;  2FAE A; 
#chains in the Genus database with same CATH topology
 1FR2 A;  2KGA A;  1QVF O;  5KP8 B;  2FVA A;  1K30 A;  4BPF A;  3DS3 A;  2K2Q A;  2FAD A;  4PH1 A;  3CE7 A;  1VQP P;  4MRT C;  2JO0 A;  2DNW A;  1F80 D;  3DS4 A;  1T8K A;  2FHS C;  2OTL P;  4U0A A;  2EIA A;  1UNK A;  1M74 A;  1NQ4 A;  3CD6 P;  2N5I A;  3RG6 C;  2K0X A;  3GZL A;  2XZ0 D;  1QVG O;  1HY8 A;  1BAJ A;  2KGC A;  1A43 A;  1Q82 Q;  3E2D A;  2QA4 P;  1OR5 A;  4UHP B;  2AFE A;  2GZF A;  2ERH A;  1E0H A;  2GDY A;  2XV6 A;  3CCU P;  2EHS A;  2K94 A;  2LPK A;  2PEM A;  3DS2 A;  1RO2 A;  2K93 A;  2FQ0 A;  2KOS A;  3G21 A;  2LIW A;  1HQB A;  5HVC A;  3CCE P;  2KG9 A;  5DCK A;  3CCM P;  3CC2 P;  1YJW P;  2JGP A;  3OW2 O;  2NO8 A;  3CCQ P;  4R0M A;  2GYK A;  3CCS P;  1DV5 A;  3CMA P;  2KOP A;  4PXH B;  1VHN A;  2KOD A;  1ZMB A;  2LOL A;  1YJ9 P;  3WBH A;  2PEN A;  1L0I A;  1K8A Q;  3RG2 A;  2CG5 B;  2FAC A;  1KLP A;  2QNW A;  2JB0 A;  1GPJ A;  3DPH A;  1M1K Q;  3DS0 A;  4GR2 A;  3EJB A;  3NTE A;  3G6E P;  1YJN P;  4XFZ A;  3G26 A;  4WYM A;  3LMO A;  2X2B A;  4U0F A;  1VQ7 P;  4U0E A;  2M8N A;  4NEO A;  2CWO A;  1VQ9 P;  1BXI A;  5JPA A;  2PEJ A;  2LL8 A;  2GZG A;  1X3O A;  1K73 Q;  2AF8 A;  2BUO A;  2KG6 A;  5F2N A;  2LML A;  2Z44 A;  2KW2 A;  3EJD A;  2JYG A;  4COC A;  2LTE A;  1D1D A;  1YIJ P;  2KGE A;  3HZQ A;  5BS1 A;  4COP A;  1YIT P;  2GZI A;  5KP6 B;  2GZJ A;  2L22 A;  4BPG A;  2WPT A;  3MGE A;  3U43 A;  4H2Y C;  2KOQ A;  5EW5 E;  1NJI Q;  4IZ6 A;  3CXC O;  1KQS O;  3LRY A;  4QNB A;  1A8O A;  1YI2 P;  2MVU A;  2ONT A;  2KGD A;  2L4B A;  2VLN A;  5HV8 A;  3H0D A;  1DNY A;  2JU2 A;  4F37 A;  1S72 P;  1Z6M A;  5BS2 A;  2KG8 A;  2Z45 A;  5HGO A;  2K5X A;  2XT1 A;  2AVA A;  2PEO A;  2KOO A;  2OTJ P;  4HKG A;  2CNR A;  1JJ2 O;  2MR7 A;  3EJE A;  2PEK A;  4CA3 A;  3B4Q A;  5F2K A;  2GDX A;  5HGN A;  2K0D X;  2MVV A;  5F2O A;  1VQL P;  2M5R A;  1AUM A;  2VLQ A;  2VLO A;  5KP7 B;  3CC7 P;  3DS1 A;  2KOR A;  2CQ8 A;  2JBG A;  1VQ4 P;  2JAZ A;  3G29 A;  2E1M A;  1E6J P;  5HGL A;  2MF4 A;  2XXM A;  2FVF A;  2N5H A;  2K92 A;  1IUQ A;  3CPW O;  3CCJ P;  2K0Y A;  3DS5 A;  2PNG A;  4U0D A;  2OAR A;  2JQ4 A;  3G0V A;  1AF8 A;  1QRJ A;  2N6Z A;  1KD1 Q;  2LIU A;  4H2W C;  4XFX A;  2JU1 A;  3GKL C;  2FQ1 A;  1VQ5 P;  2PEQ A;  1EIA A;  2M8L A;  2MD9 A;  1IMP A;  2KWL A;  3I56 P;  2CGQ A;  1GXG A;  1AYI A;  3HYB A;  1VKU A;  3G1G A;  2MY5 A;  2LF4 A;  1VQK P;  1KC8 Q;  2EG5 A;  4XRQ A;  2FQ2 A;  3M1M A;  1N8R Q;  3CCV P;  2N6Y A;  2L0Q A;  2N98 A;  2KR5 A;  3H47 A;  3H4E A;  2Z46 A;  5HGM A;  1RO0 A;  3Q20 A;  1VQ8 P;  1IMQ A;  2QEX P;  2EFJ A;  3GJN A;  1M6N A;  2GZE A;  2P9X A;  3G1I A;  1L0H A;  1ZNV A;  1VQO P;  1Q81 Q;  2DGY A;  2BHV A;  1RNI A;  1YHQ P;  4GR6 A;  2MR8 A;  1VQM P;  3I55 P;  1GXH A;  2VSQ A;  1W2B O;  4PH0 A;  1CEI A;  7CEI A;  1VQN P;  2XZ1 C;  1M6E X;  2GDW A;  5CZD B;  2EHT A;  3GZM A;  1UJZ A;  4H2X C;  1EMV A;  2L6E A;  1K9M Q;  4DG9 A;  3P05 A;  3CCL P;  1VQ6 P;  2AFD A;  2ROQ A;  4IPY A;  1M90 Q;  3DTJ A;  2PY8 A;  2L9F A;  5EJD A;  4PWV B;  4XFY A;  2M8P A;  2PEI A;  2VLP A;  4U0C A;  3G4S P;  2LKI A;  1ACP A;  4U0B A;  2FVE A;  3CC4 P;  1MZ8 A;  4QKO A;  1Q7Y Q;  3CME P;  4XRO A;  3G28 A;  3NY7 B;  1Q86 Q;  4M0I A;  2JYL A;  3G71 P;  5I4T G;  3CCR P;  2N50 A;  3VRL C;  4BPH A;  1EOQ A;  2FAE A;  3B5I A; 
#chains in the Genus database with same CATH homology
 2AVA A;  2KGA A;  2N6Y A;  2L0Q A;  5KP8 B;  1L0I A;  2N98 A;  2FVA A;  3RG2 A;  4BPF A;  2KOO A;  2K2Q A;  2CG5 B;  2KR5 A;  4HKG A;  2CNR A;  2FAC A;  2FAD A;  3CE7 A;  2MR7 A;  3EJE A;  1KLP A;  2QNW A;  4MRT C;  2DNW A;  1F80 D;  4CA3 A;  2GDX A;  3EJB A;  1T8K A;  2MVV A;  2FHS C;  1L0H A;  2M5R A;  3LMO A;  2X2B A;  5KP7 B;  4NEO A;  1NQ4 A;  2N5I A;  2KOR A;  2CQ8 A;  2MR8 A;  2K0X A;  2VSQ A;  3GZL A;  2XZ0 D;  1HY8 A;  2LL8 A;  2MF4 A;  2KGC A;  2FVF A;  2XZ1 C;  2N5H A;  1X3O A;  2AF8 A;  2K92 A;  2KG6 A;  2GDW A;  5CZD B;  2EHT A;  2LML A;  1OR5 A;  2K0Y A;  2KW2 A;  3EJD A;  3GZM A;  2AFE A;  4H2X C;  2PNG A;  4DG9 A;  2LTE A;  2JQ4 A;  2AFD A;  2ROQ A;  2KGE A;  2GDY A;  1AF8 A;  2L9F A;  5EJD A;  2EHS A;  4PWV B;  5KP6 B;  2L22 A;  4BPG A;  2N6Z A;  2K94 A;  2LPK A;  2LIU A;  4H2W C;  2JU1 A;  2FQ1 A;  4H2Y C;  2K93 A;  2FQ0 A;  2KOS A;  2KOQ A;  2LIW A;  2MD9 A;  1ACP A;  4IZ6 A;  2LKI A;  2KWL A;  1HQB A;  5HVC A;  2FVE A;  2KG9 A;  2CGQ A;  2JGP A;  1VKU A;  2MVU A;  2KGD A;  2L4B A;  2MY5 A;  3NY7 B;  5HV8 A;  1DNY A;  2JU2 A;  4R0M A;  2N50 A;  4BPH A;  1DV5 A;  2KOP A;  4PXH B;  2FQ2 A;  2KG8 A;  2LOL A;  2FAE A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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