1CEIA

Structure determination of the colicin e7 immunity protein (imme7) that binds specifically to the dnase-type colicin e7 and inhibits its bacteriocidal activity
Total Genus 28
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
28
sequence length
85
structure length
85
Chain Sequence
LKNSISDYTEAEFVQLLKEIEKENVAATDDVLDVLLEHFVKITEHPDGTDLIYYPSDNRDDSPEGIVKEIKEWRAANGKPGFKQG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Antibacterial protein
publication title The crystal structure of the immunity protein of colicin E7 suggests a possible colicin-interacting surface.
pubmed doi rcsb
molecule keywords COLICIN E7 IMMUNITY PROTEIN
total genus 28
structure length 85
sequence length 85
ec nomenclature
pdb deposition date 1996-03-19

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01320 Colicin_Pyocin Colicin immunity protein / pyocin immunity protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.20 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A Colicin E immunity protein 1ceiA00
3GJNA 2JBGA 2VLQA 1IMPA 1UJZA 2GZGA 4QKOA 1AYIA 4F37A 2VLPA 1EMVA 2NO8A 2GYKA 1BXIA 2ERHA 7CEIA 2K0DX 1GXHA 1MZ8A 2JAZA 2VLOA 3GKLC 1UNKA 1IMQA 2WPTA 4UHPB 5EW5E 1CEIA 2GZFA 2GZEA 1ZNVA 3U43A 2K5XA 2GZIA 1E0HA 1GXGA 2VLNA 1FR2A 2JB0A 2GZJA
chains in the Genus database with same CATH superfamily
4COPA 3RG2A 2JO0A 2KGCA 4QKOA 4COCA 1VQ6P 1HY8A 3I55P 3DS4A 2EHTA 3G26A 3G28A 3NY7B 1JJ2O 2KOQA 4M0IA 5KP8B 3CCSP 3G1GA 1E6JP 2XZ1C 4H2WC 2M8NA 4R0MA 4U0FA 5HGOA 2P9XA 3G21A 2K93A 2EIAA 1RO2A 3P05A 1IMQA 2N98A 1KLPA 4PXHB 2K0YA 3DS1A 2GDWA 1VQ4P 3WBHA 2JB0A 2GZJA 4BPFA 1YI2P 2FVFA 1KD1Q 1VQKP 2M8PA 1AYIA 2KG9A 1IUQA 2XV6A 1ZMBA 2QEXP 2CG5B 2XXMA 4UHPB 3CCMP 2M8LA 2KG6A 1YJNP 2CGQA 3GZLA 1YJ9P 5HV8A 1EMVA 3E2DA 1N8RQ 5HVCA 2LTEA 2MR7A 2N5IA 3Q20A 5KP6B 1M90Q 3CCQP 2N6YA 4U0DA 5BS1A 2LPKA 1M6EX 1VQNP 1K8AQ 1RO0A 2PEJA 1A43A 3DS3A 1KC8Q 2OTJP 2PNGA 2ROQA 1EOQA 1YIJP 1Q86Q 1BAJA 2KWLA 1YJWP 2AVAA 1NJIQ 2K94A 2JU1A 5HGNA 2LOLA 2VLNA 1ACPA 1EIAA 4H2YC 2VLQA 4MRTC 2GZGA 2JYLA 1GPJA 2EFJA 1S72P 2VSQA 3GKLC 5F2OA 2BHVA 3CCRP 2M5RA 2MVVA 3EJEA 1L0IA 2DGYA 2QA4P 1RNIA 3G1IA 1VQ9P 3NTEA 2X2BA 3CC2P 1YHQP 1VKUA 1CEIA 1K30A 1ZNVA 4IZ6A 3LRYA 2Z44A 3OW2O 2FQ0A 2L4BA 2KGAA 2KOOA 4GR2A 4DG9A 2PEMA 3DTJA 2XT1A 3CCVP 3DS0A 3B5IA 1HQBA 1AF8A 2LMLA 2K92A 2GZFA 2GZEA 3M1MA 5EJDA 5CZDB 5DCKA 2LL8A 1L0HA 2OTLP 3CE7A 3CD6P 1DV5A 1OR5A 3H4EA 1VQOP 3G4SP 4U0CA 5I4TG 3VRLC 2AFEA 2K0XA 2VLOA 2L0QA 1VQ8P 1DNYA 2EG5A 3EJBA 2WPTA 2CQ8A 1NQ4A 2GZIA 2N50A 3DS2A 1A8OA 2KR5A 3CCJP 1M74A 5BS2A 2NO8A 2GYKA 5JPAA 4CA3A 7CEIA 2MVUA 1QVGO 2K2QA 1VQMP 2LF4A 1VQ5P 3G0VA 2PY8A 5HGMA 2FAEA 2ONTA 2JQ4A 1M6NA 2LKIA 1W2BO 2JBGA 1YITP 4U0BA 3G6EP 2JAZA 2MF4A 1D1DA 2MD9A 3MGEA 4XFZA 5KP7B 2PEKA 4H2XC 2QNWA 2LIUA 2FQ1A 2KODA 3B4QA 1Q7YQ 1QRJA 1QVFO 2VLPA 1VQLP 1FR2A 4HKGA 4XROA 2L9FA 1M1KQ 2L22A 2FVAA 2CNRA 2PEIA 5F2NA 1F80D 2N6ZA 1GXGA 3HZQA 4GR6A 2GDYA 3GJNA 3CMAP 3GZMA 2KORA 2FADA 2KOSA 2DNWA 4IPYA 2OARA 3I56P 3CMEP 2KGEA 2LIWA 3U43A 2AF8A 1E0HA 3G71P 2CWOA 4NEOA 2N5HA 3DPHA 1IMPA 3DS5A 5F2KA 4XRQA 4U0EA 4PH0A 2E1MA 1VHNA 1GXHA 1MZ8A 4BPHA 3EJDA 4WYMA 1K73Q 1Q81Q 1AUMA 3RG6C 3LMOA 2FHSC 3CC7P 4PH1A 2EHSA 1X3OA 2KG8A 3CC4P 2JGPA 2FQ2A 1KQSO 2BUOA 4F37A 3HYBA 2PENA 3H0DA 1VQPP 3CCEP 3CCUP 1UNKA 5HGLA 2L6EA 4PWVB 4U0AA 2JYGA 3CPWO 1K9MQ 4XFXA 3CCLP 2FACA 3CXCO 1UJZA 4BPGA 1T8KA 1BXIA 2ERHA 2PEQA 2K0DX 2PEOA 2GDXA 2KGDA 2Z46A 2MY5A 4XFYA 2Z45A 2AFDA 3G29A 5EW5E 2KOPA 1Z6MA 3H47A 1Q82Q 2K5XA 2XZ0D 2KW2A 2FVEA 1VQ7P 2MR8A 4QNBA 2JU2A
chains in the Genus database with same CATH topology
3GJNA 2JBGA 2VLQA 1IMPA 1UJZA 2GZGA 4QKOA 1AYIA 4F37A 2VLPA 1EMVA 2NO8A 2GYKA 1BXIA 2ERHA 7CEIA 2K0DX 1GXHA 1MZ8A 2JAZA 2VLOA 3GKLC 1UNKA 1IMQA 2WPTA 4UHPB 5EW5E 1CEIA 2GZFA 2GZEA 1ZNVA 3U43A 2K5XA 2GZIA 1E0HA 1GXGA 2VLNA 1FR2A 2JB0A 2GZJA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3GJN A;  2JBG A;  2VLQ A;  1IMP A;  1UJZ A;  2GZG A;  4QKO A;  1AYI A;  4F37 A;  2VLP A;  1EMV A;  2NO8 A;  2GYK A;  1BXI A;  2ERH A;  7CEI A;  2K0D X;  1GXH A;  1MZ8 A;  2JAZ A;  2VLO A;  3GKL C;  1UNK A;  1IMQ A;  2WPT A;  4UHP B;  5EW5 E;  1CEI A;  2GZF A;  2GZE A;  1ZNV A;  3U43 A;  2K5X A;  2GZI A;  1E0H A;  1GXG A;  2VLN A;  1FR2 A;  2JB0 A;  2GZJ A; 
#chains in the Genus database with same CATH topology
 4COP A;  3RG2 A;  2JO0 A;  2KGC A;  4QKO A;  4COC A;  1VQ6 P;  1HY8 A;  3I55 P;  3DS4 A;  2EHT A;  3G26 A;  3G28 A;  3NY7 B;  1JJ2 O;  2KOQ A;  4M0I A;  5KP8 B;  3CCS P;  3G1G A;  1E6J P;  2XZ1 C;  4H2W C;  2M8N A;  4R0M A;  4U0F A;  5HGO A;  2P9X A;  3G21 A;  2K93 A;  2EIA A;  1RO2 A;  3P05 A;  1IMQ A;  2N98 A;  1KLP A;  4PXH B;  2K0Y A;  3DS1 A;  2GDW A;  1VQ4 P;  3WBH A;  2JB0 A;  2GZJ A;  4BPF A;  1YI2 P;  2FVF A;  1KD1 Q;  1VQK P;  2M8P A;  1AYI A;  2KG9 A;  1IUQ A;  2XV6 A;  1ZMB A;  2QEX P;  2CG5 B;  2XXM A;  4UHP B;  3CCM P;  2M8L A;  2KG6 A;  1YJN P;  2CGQ A;  3GZL A;  1YJ9 P;  5HV8 A;  1EMV A;  3E2D A;  1N8R Q;  5HVC A;  2LTE A;  2MR7 A;  2N5I A;  3Q20 A;  5KP6 B;  1M90 Q;  3CCQ P;  2N6Y A;  4U0D A;  5BS1 A;  2LPK A;  1M6E X;  1VQN P;  1K8A Q;  1RO0 A;  2PEJ A;  1A43 A;  3DS3 A;  1KC8 Q;  2OTJ P;  2PNG A;  2ROQ A;  1EOQ A;  1YIJ P;  1Q86 Q;  1BAJ A;  2KWL A;  1YJW P;  2AVA A;  1NJI Q;  2K94 A;  2JU1 A;  5HGN A;  2LOL A;  2VLN A;  1ACP A;  1EIA A;  4H2Y C;  2VLQ A;  4MRT C;  2GZG A;  2JYL A;  1GPJ A;  2EFJ A;  1S72 P;  2VSQ A;  3GKL C;  5F2O A;  2BHV A;  3CCR P;  2M5R A;  2MVV A;  3EJE A;  1L0I A;  2DGY A;  2QA4 P;  1RNI A;  3G1I A;  1VQ9 P;  3NTE A;  2X2B A;  3CC2 P;  1YHQ P;  1VKU A;  1CEI A;  1K30 A;  1ZNV A;  4IZ6 A;  3LRY A;  2Z44 A;  3OW2 O;  2FQ0 A;  2L4B A;  2KGA A;  2KOO A;  4GR2 A;  4DG9 A;  2PEM A;  3DTJ A;  2XT1 A;  3CCV P;  3DS0 A;  3B5I A;  1HQB A;  1AF8 A;  2LML A;  2K92 A;  2GZF A;  2GZE A;  3M1M A;  5EJD A;  5CZD B;  5DCK A;  2LL8 A;  1L0H A;  2OTL P;  3CE7 A;  3CD6 P;  1DV5 A;  1OR5 A;  3H4E A;  1VQO P;  3G4S P;  4U0C A;  5I4T G;  3VRL C;  2AFE A;  2K0X A;  2VLO A;  2L0Q A;  1VQ8 P;  1DNY A;  2EG5 A;  3EJB A;  2WPT A;  2CQ8 A;  1NQ4 A;  2GZI A;  2N50 A;  3DS2 A;  1A8O A;  2KR5 A;  3CCJ P;  1M74 A;  5BS2 A;  2NO8 A;  2GYK A;  5JPA A;  4CA3 A;  7CEI A;  2MVU A;  1QVG O;  2K2Q A;  1VQM P;  2LF4 A;  1VQ5 P;  3G0V A;  2PY8 A;  5HGM A;  2FAE A;  2ONT A;  2JQ4 A;  1M6N A;  2LKI A;  1W2B O;  2JBG A;  1YIT P;  4U0B A;  3G6E P;  2JAZ A;  2MF4 A;  1D1D A;  2MD9 A;  3MGE A;  4XFZ A;  5KP7 B;  2PEK A;  4H2X C;  2QNW A;  2LIU A;  2FQ1 A;  2KOD A;  3B4Q A;  1Q7Y Q;  1QRJ A;  1QVF O;  2VLP A;  1VQL P;  1FR2 A;  4HKG A;  4XRO A;  2L9F A;  1M1K Q;  2L22 A;  2FVA A;  2CNR A;  2PEI A;  5F2N A;  1F80 D;  2N6Z A;  1GXG A;  3HZQ A;  4GR6 A;  2GDY A;  3GJN A;  3CMA P;  3GZM A;  2KOR A;  2FAD A;  2KOS A;  2DNW A;  4IPY A;  2OAR A;  3I56 P;  3CME P;  2KGE A;  2LIW A;  3U43 A;  2AF8 A;  1E0H A;  3G71 P;  2CWO A;  4NEO A;  2N5H A;  3DPH A;  1IMP A;  3DS5 A;  5F2K A;  4XRQ A;  4U0E A;  4PH0 A;  2E1M A;  1VHN A;  1GXH A;  1MZ8 A;  4BPH A;  3EJD A;  4WYM A;  1K73 Q;  1Q81 Q;  1AUM A;  3RG6 C;  3LMO A;  2FHS C;  3CC7 P;  4PH1 A;  2EHS A;  1X3O A;  2KG8 A;  3CC4 P;  2JGP A;  2FQ2 A;  1KQS O;  2BUO A;  4F37 A;  3HYB A;  2PEN A;  3H0D A;  1VQP P;  3CCE P;  3CCU P;  1UNK A;  5HGL A;  2L6E A;  4PWV B;  4U0A A;  2JYG A;  3CPW O;  1K9M Q;  4XFX A;  3CCL P;  2FAC A;  3CXC O;  1UJZ A;  4BPG A;  1T8K A;  1BXI A;  2ERH A;  2PEQ A;  2K0D X;  2PEO A;  2GDX A;  2KGD A;  2Z46 A;  2MY5 A;  4XFY A;  2Z45 A;  2AFD A;  3G29 A;  5EW5 E;  2KOP A;  1Z6M A;  3H47 A;  1Q82 Q;  2K5X A;  2XZ0 D;  2KW2 A;  2FVE A;  1VQ7 P;  2MR8 A;  4QNB A;  2JU2 A; 
#chains in the Genus database with same CATH homology
 3GJN A;  2JBG A;  2VLQ A;  1IMP A;  1UJZ A;  2GZG A;  4QKO A;  1AYI A;  4F37 A;  2VLP A;  1EMV A;  2NO8 A;  2GYK A;  1BXI A;  2ERH A;  7CEI A;  2K0D X;  1GXH A;  1MZ8 A;  2JAZ A;  2VLO A;  3GKL C;  1UNK A;  1IMQ A;  2WPT A;  4UHP B;  5EW5 E;  1CEI A;  2GZF A;  2GZE A;  1ZNV A;  3U43 A;  2K5X A;  2GZI A;  1E0H A;  1GXG A;  2VLN A;  1FR2 A;  2JB0 A;  2GZJ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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