2N5IA

Pltl-pyrrolyl
Total Genus 26
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
26
sequence length
90
structure length
90
Chain Sequence
MDGEEVKEKIRRYIMEDLIGPSAKEDELDDQTPLLEWGILNSMNIVKLMVYIRDEMGVSIPSTHITGKYFKDLNAISRTVEQLKAESALE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transport protein
source organism Pseudomonas protegens pf-5
publication title Structure and Substrate Sequestration in the Pyoluteorin Type II Peptidyl Carrier Protein PltL.
pubmed doi rcsb
molecule keywords Peptidyl carrier protein PltL
total genus 26
structure length 90
sequence length 90
ec nomenclature
pdb deposition date 2015-07-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2n5iA00
2N5HA 2L0QA 4MRTC 4H2WC 2KGAA 4H2YC 2LPKA 2JQ4A 2GDWA 2KWLA 2CNRA 4BPFA 2LKIA 2M5RA 3GZMA 5CZDB 4CA3A 2AVAA 2QNWA 2N6YA 3EJEA 2JGPA 2N6ZA 2FQ0A 2KGCA 5EJDA 1OR5A 2GDXA 2GDYA 2LOLA 2KOOA 1X3OA 2N50A 2FVFA 2JU1A 4PXHB 3GZLA 1L0HA 4DG9A 2LIWA 5HVCA 4NEOA 2KG6A 2MD9A 2FADA 1F80D 1KLPA 2KW2A 2N98A 2DNWA 5KP7B 2JU2A 2K2QA 2KGDA 4R0MA 2FACA 1DNYA 3EJDA 1DV5A 2LL8A 2FQ2A 2MR7A 2FHSC 4IZ6A 2MVUA 2XZ0D 2AF8A 2KR5A 2ROQA 3CE7A 2K92A 2K94A 2MVVA 2KOSA 2AFDA 4BPHA 3LMOA 5KP6B 4BPGA 2CQ8A 2CGQA 2CG5B 1AF8A 2LTEA 2AFEA 3RG2A 4HKGA 2N5IA 2L4BA 2KOQA 1T8KA 2FAEA 2KG9A 2FVEA 2FQ1A 5HV8A 2KG8A 2KOPA 2KGEA 2MR8A 2EHTA 2L22A 5KP8B 1ACPA 4PWVB 2EHSA 1VKUA 2L9FA 1HY8A 2MY5A 2VSQA 4H2XC 2K93A 1NQ4A 2LIUA 2XZ1C 1HQBA 2PNGA 2X2BA 3EJBA 2MF4A 3NY7B 2FVAA 1L0IA 2K0XA 2K0YA 2KORA 2LMLA
chains in the Genus database with same CATH superfamily
3I55P 2VLPA 2GZEA 4H2WC 4U0BA 2NO8A 2M8LA 3H47A 4CA3A 1Q86Q 2N6YA 3RG6C 1Q82Q 5EJDA 1MZ8A 2GYKA 2KOOA 4PH1A 2N50A 1UNKA 5HGNA 3M1MA 1YI2P 5HVCA 2KG6A 3CCJP 1M74A 2Z45A 1KLPA 2JU2A 3DS4A 3EJDA 2AF8A 5F2KA 4IPYA 1VQ7P 3DS2A 3B5IA 4BPHA 3LMOA 5KP6B 2CG5B 3DPHA 3CCSP 1T8KA 2PEMA 2FVEA 1IUQA 1YJ9P 4QNBA 1IMQA 2FQ1A 2ERHA 3G29A 3CMEP 2KOPA 2KGEA 2MR8A 1E0HA 2GZGA 2EHSA 2K0DX 2VLNA 1NQ4A 4GR6A 2X2BA 4COPA 2MF4A 3NY7B 4PH0A 5HGMA 4XRQA 4GR2A 3HZQA 1KD1Q 1A8OA 4MRTC 1YITP 1M6EX 4H2YC 1YIJP 2JQ4A 5HGOA 3I56P 2PY8A 2KWLA 2VLOA 4BPFA 3CMAP 2LKIA 1K30A 2EFJA 7CEIA 2QNWA 2BHVA 2JGPA 1NJIQ 2GDXA 3HYBA 2K5XA 2LOLA 2JU1A 5I4TG 3GZLA 2P9XA 2OTJP 2LF4A 2MD9A 2FADA 1GXGA 1UJZA 2CWOA 1A43A 1E6JP 2K2QA 4U0FA 4R0MA 1RNIA 2VLQA 2FQ2A 4IZ6A 2MVUA 2PEOA 2K92A 4XFYA 2K94A 1JJ2O 2AFDA 2PEIA 1CEIA 3H0DA 1GXHA 2E1MA 2LTEA 2ONTA 2M8PA 1YJWP 4HKGA 3CPWO 2N5IA 2L4BA 1Q7YQ 3U43A 3CCEP 5HGLA 3G26A 3CD6P 3CCLP 2JO0A 3CXCO 3CC2P 1VQKP 3OW2O 4M0IA 2L22A 1EMVA 1ACPA 2KODA 3E2DA 3G6EP 1EOQA 2JBGA 1S72P 3CC4P 2L9FA 2MY5A 3DS0A 4F37A 2LIUA 1HQBA 2PNGA 3EJBA 1VQPP 2FVAA 3P05A 3DS5A 2KORA 2Z44A 3DS3A 2LMLA 2L0QA 1RO2A 2LPKA 3DTJA 3CCRP 2CNRA 2DGYA 2AVAA 3G21A 2M8NA 3G71P 2N6ZA 2FQ0A 2KGCA 2GDYA 1VQNP 1X3OA 4PXHB 3LRYA 2EIAA 4XFXA 2KW2A 2N98A 1BXIA 2DNWA 1YJNP 2KGDA 5EW5E 2JAZA 2FACA 1DNYA 4XFZA 2LL8A 2FHSC 2XZ0D 1BAJA 3CE7A 2OTLP 2OARA 2MVVA 2KOSA 3CCVP 3MGEA 4BPGA 2CQ8A 1AF8A 2AFEA 2PEKA 2PEQA 1QVFO 2KOQA 2GZJA 2FAEA 2WPTA 4UHPB 1D1DA 5HV8A 4U0CA 5JPAA 2EHTA 4WYMA 1AUMA 4PWVB 1VKUA 1HY8A 2VSQA 3CCMP 3NTEA 4U0DA 2XZ1C 1M90Q 3WBHA 2PEJA 2K0XA 2L6EA 5BS2A 4COCA 2N5HA 1FR2A 1K8AQ 2BUOA 2KGAA 2GDWA 3G0VA 5BS1A 2M5RA 3GZMA 5CZDB 2XXMA 4U0EA 3DS1A 3G4SP 3EJEA 2JYLA 1YHQP 1KC8Q 1GPJA 1OR5A 1M6NA 2FVFA 1K73Q 1L0HA 4DG9A 2LIWA 3G28A 4NEOA 1M1KQ 1Z6MA 2GZFA 4QKOA 1F80D 2QA4P 2PENA 1RO0A 3B4QA 1ZNVA 5KP7B 3G1IA 2QEXP 2XV6A 1VHNA 1DV5A 3H4EA 2MR7A 1QVGO 1VQ6P 2KR5A 3GKLC 2ROQA 1QRJA 1ZMBA 3VRLC 3CCUP 2CGQA 5F2OA 1IMPA 1VQ5P 3RG2A 3CC7P 1VQLP 1VQ4P 1N8RQ 1VQMP 2KG9A 2Z46A 2EG5A 1VQ8P 2JB0A 5F2NA 2KG8A 2JYGA 1KQSO 3Q20A 5KP8B 1W2BO 5DCKA 1Q81Q 1EIAA 2XT1A 1VQ9P 4U0AA 4H2XC 1AYIA 1K9MQ 4XROA 2K93A 3GJNA 3G1GA 3CCQP 1L0IA 2K0YA 2GZIA 1VQOP
chains in the Genus database with same CATH topology
2N5HA 2L0QA 4MRTC 4H2WC 2KGAA 4H2YC 2LPKA 2JQ4A 2GDWA 2KWLA 2CNRA 4BPFA 2LKIA 2M5RA 3GZMA 5CZDB 4CA3A 2AVAA 2QNWA 2N6YA 3EJEA 2JGPA 2N6ZA 2FQ0A 2KGCA 5EJDA 1OR5A 2GDXA 2GDYA 2LOLA 2KOOA 1X3OA 2N50A 2FVFA 2JU1A 4PXHB 3GZLA 1L0HA 4DG9A 2LIWA 5HVCA 4NEOA 2KG6A 2MD9A 2FADA 1F80D 1KLPA 2KW2A 2N98A 2DNWA 5KP7B 2JU2A 2K2QA 2KGDA 4R0MA 2FACA 1DNYA 3EJDA 1DV5A 2LL8A 2FQ2A 2MR7A 2FHSC 4IZ6A 2MVUA 2XZ0D 2AF8A 2KR5A 2ROQA 3CE7A 2K92A 2K94A 2MVVA 2KOSA 2AFDA 4BPHA 3LMOA 5KP6B 4BPGA 2CQ8A 2CGQA 2CG5B 1AF8A 2LTEA 2AFEA 3RG2A 4HKGA 2N5IA 2L4BA 2KOQA 1T8KA 2FAEA 2KG9A 2FVEA 2FQ1A 5HV8A 2KG8A 2KOPA 2KGEA 2MR8A 2EHTA 2L22A 5KP8B 1ACPA 4PWVB 2EHSA 1VKUA 2L9FA 1HY8A 2MY5A 2VSQA 4H2XC 2K93A 1NQ4A 2LIUA 2XZ1C 1HQBA 2PNGA 2X2BA 3EJBA 2MF4A 3NY7B 2FVAA 1L0IA 2K0XA 2K0YA 2KORA 2LMLA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2N5H A;  2L0Q A;  4MRT C;  4H2W C;  2KGA A;  4H2Y C;  2LPK A;  2JQ4 A;  2GDW A;  2KWL A;  2CNR A;  4BPF A;  2LKI A;  2M5R A;  3GZM A;  5CZD B;  4CA3 A;  2AVA A;  2QNW A;  2N6Y A;  3EJE A;  2JGP A;  2N6Z A;  2FQ0 A;  2KGC A;  5EJD A;  1OR5 A;  2GDX A;  2GDY A;  2LOL A;  2KOO A;  1X3O A;  2N50 A;  2FVF A;  2JU1 A;  4PXH B;  3GZL A;  1L0H A;  4DG9 A;  2LIW A;  5HVC A;  4NEO A;  2KG6 A;  2MD9 A;  2FAD A;  1F80 D;  1KLP A;  2KW2 A;  2N98 A;  2DNW A;  5KP7 B;  2JU2 A;  2K2Q A;  2KGD A;  4R0M A;  2FAC A;  1DNY A;  3EJD A;  1DV5 A;  2LL8 A;  2FQ2 A;  2MR7 A;  2FHS C;  4IZ6 A;  2MVU A;  2XZ0 D;  2AF8 A;  2KR5 A;  2ROQ A;  3CE7 A;  2K92 A;  2K94 A;  2MVV A;  2KOS A;  2AFD A;  4BPH A;  3LMO A;  5KP6 B;  4BPG A;  2CQ8 A;  2CGQ A;  2CG5 B;  1AF8 A;  2LTE A;  2AFE A;  3RG2 A;  4HKG A;  2N5I A;  2L4B A;  2KOQ A;  1T8K A;  2FAE A;  2KG9 A;  2FVE A;  2FQ1 A;  5HV8 A;  2KG8 A;  2KOP A;  2KGE A;  2MR8 A;  2EHT A;  2L22 A;  5KP8 B;  1ACP A;  4PWV B;  2EHS A;  1VKU A;  2L9F A;  1HY8 A;  2MY5 A;  2VSQ A;  4H2X C;  2K93 A;  1NQ4 A;  2LIU A;  2XZ1 C;  1HQB A;  2PNG A;  2X2B A;  3EJB A;  2MF4 A;  3NY7 B;  2FVA A;  1L0I A;  2K0X A;  2K0Y A;  2KOR A;  2LML A; 
#chains in the Genus database with same CATH topology
 3I55 P;  2VLP A;  2GZE A;  4H2W C;  4U0B A;  2NO8 A;  2M8L A;  3H47 A;  4CA3 A;  1Q86 Q;  2N6Y A;  3RG6 C;  1Q82 Q;  5EJD A;  1MZ8 A;  2GYK A;  2KOO A;  4PH1 A;  2N50 A;  1UNK A;  5HGN A;  3M1M A;  1YI2 P;  5HVC A;  2KG6 A;  3CCJ P;  1M74 A;  2Z45 A;  1KLP A;  2JU2 A;  3DS4 A;  3EJD A;  2AF8 A;  5F2K A;  4IPY A;  1VQ7 P;  3DS2 A;  3B5I A;  4BPH A;  3LMO A;  5KP6 B;  2CG5 B;  3DPH A;  3CCS P;  1T8K A;  2PEM A;  2FVE A;  1IUQ A;  1YJ9 P;  4QNB A;  1IMQ A;  2FQ1 A;  2ERH A;  3G29 A;  3CME P;  2KOP A;  2KGE A;  2MR8 A;  1E0H A;  2GZG A;  2EHS A;  2K0D X;  2VLN A;  1NQ4 A;  4GR6 A;  2X2B A;  4COP A;  2MF4 A;  3NY7 B;  4PH0 A;  5HGM A;  4XRQ A;  4GR2 A;  3HZQ A;  1KD1 Q;  1A8O A;  4MRT C;  1YIT P;  1M6E X;  4H2Y C;  1YIJ P;  2JQ4 A;  5HGO A;  3I56 P;  2PY8 A;  2KWL A;  2VLO A;  4BPF A;  3CMA P;  2LKI A;  1K30 A;  2EFJ A;  7CEI A;  2QNW A;  2BHV A;  2JGP A;  1NJI Q;  2GDX A;  3HYB A;  2K5X A;  2LOL A;  2JU1 A;  5I4T G;  3GZL A;  2P9X A;  2OTJ P;  2LF4 A;  2MD9 A;  2FAD A;  1GXG A;  1UJZ A;  2CWO A;  1A43 A;  1E6J P;  2K2Q A;  4U0F A;  4R0M A;  1RNI A;  2VLQ A;  2FQ2 A;  4IZ6 A;  2MVU A;  2PEO A;  2K92 A;  4XFY A;  2K94 A;  1JJ2 O;  2AFD A;  2PEI A;  1CEI A;  3H0D A;  1GXH A;  2E1M A;  2LTE A;  2ONT A;  2M8P A;  1YJW P;  4HKG A;  3CPW O;  2N5I A;  2L4B A;  1Q7Y Q;  3U43 A;  3CCE P;  5HGL A;  3G26 A;  3CD6 P;  3CCL P;  2JO0 A;  3CXC O;  3CC2 P;  1VQK P;  3OW2 O;  4M0I A;  2L22 A;  1EMV A;  1ACP A;  2KOD A;  3E2D A;  3G6E P;  1EOQ A;  2JBG A;  1S72 P;  3CC4 P;  2L9F A;  2MY5 A;  3DS0 A;  4F37 A;  2LIU A;  1HQB A;  2PNG A;  3EJB A;  1VQP P;  2FVA A;  3P05 A;  3DS5 A;  2KOR A;  2Z44 A;  3DS3 A;  2LML A;  2L0Q A;  1RO2 A;  2LPK A;  3DTJ A;  3CCR P;  2CNR A;  2DGY A;  2AVA A;  3G21 A;  2M8N A;  3G71 P;  2N6Z A;  2FQ0 A;  2KGC A;  2GDY A;  1VQN P;  1X3O A;  4PXH B;  3LRY A;  2EIA A;  4XFX A;  2KW2 A;  2N98 A;  1BXI A;  2DNW A;  1YJN P;  2KGD A;  5EW5 E;  2JAZ A;  2FAC A;  1DNY A;  4XFZ A;  2LL8 A;  2FHS C;  2XZ0 D;  1BAJ A;  3CE7 A;  2OTL P;  2OAR A;  2MVV A;  2KOS A;  3CCV P;  3MGE A;  4BPG A;  2CQ8 A;  1AF8 A;  2AFE A;  2PEK A;  2PEQ A;  1QVF O;  2KOQ A;  2GZJ A;  2FAE A;  2WPT A;  4UHP B;  1D1D A;  5HV8 A;  4U0C A;  5JPA A;  2EHT A;  4WYM A;  1AUM A;  4PWV B;  1VKU A;  1HY8 A;  2VSQ A;  3CCM P;  3NTE A;  4U0D A;  2XZ1 C;  1M90 Q;  3WBH A;  2PEJ A;  2K0X A;  2L6E A;  5BS2 A;  4COC A;  2N5H A;  1FR2 A;  1K8A Q;  2BUO A;  2KGA A;  2GDW A;  3G0V A;  5BS1 A;  2M5R A;  3GZM A;  5CZD B;  2XXM A;  4U0E A;  3DS1 A;  3G4S P;  3EJE A;  2JYL A;  1YHQ P;  1KC8 Q;  1GPJ A;  1OR5 A;  1M6N A;  2FVF A;  1K73 Q;  1L0H A;  4DG9 A;  2LIW A;  3G28 A;  4NEO A;  1M1K Q;  1Z6M A;  2GZF A;  4QKO A;  1F80 D;  2QA4 P;  2PEN A;  1RO0 A;  3B4Q A;  1ZNV A;  5KP7 B;  3G1I A;  2QEX P;  2XV6 A;  1VHN A;  1DV5 A;  3H4E A;  2MR7 A;  1QVG O;  1VQ6 P;  2KR5 A;  3GKL C;  2ROQ A;  1QRJ A;  1ZMB A;  3VRL C;  3CCU P;  2CGQ A;  5F2O A;  1IMP A;  1VQ5 P;  3RG2 A;  3CC7 P;  1VQL P;  1VQ4 P;  1N8R Q;  1VQM P;  2KG9 A;  2Z46 A;  2EG5 A;  1VQ8 P;  2JB0 A;  5F2N A;  2KG8 A;  2JYG A;  1KQS O;  3Q20 A;  5KP8 B;  1W2B O;  5DCK A;  1Q81 Q;  1EIA A;  2XT1 A;  1VQ9 P;  4U0A A;  4H2X C;  1AYI A;  1K9M Q;  4XRO A;  2K93 A;  3GJN A;  3G1G A;  3CCQ P;  1L0I A;  2K0Y A;  2GZI A;  1VQO P; 
#chains in the Genus database with same CATH homology
 2N5H A;  2L0Q A;  4MRT C;  4H2W C;  2KGA A;  4H2Y C;  2LPK A;  2JQ4 A;  2GDW A;  2KWL A;  2CNR A;  4BPF A;  2LKI A;  2M5R A;  3GZM A;  5CZD B;  4CA3 A;  2AVA A;  2QNW A;  2N6Y A;  3EJE A;  2JGP A;  2N6Z A;  2FQ0 A;  2KGC A;  5EJD A;  1OR5 A;  2GDX A;  2GDY A;  2LOL A;  2KOO A;  1X3O A;  2N50 A;  2FVF A;  2JU1 A;  4PXH B;  3GZL A;  1L0H A;  4DG9 A;  2LIW A;  5HVC A;  4NEO A;  2KG6 A;  2MD9 A;  2FAD A;  1F80 D;  1KLP A;  2KW2 A;  2N98 A;  2DNW A;  5KP7 B;  2JU2 A;  2K2Q A;  2KGD A;  4R0M A;  2FAC A;  1DNY A;  3EJD A;  1DV5 A;  2LL8 A;  2FQ2 A;  2MR7 A;  2FHS C;  4IZ6 A;  2MVU A;  2XZ0 D;  2AF8 A;  2KR5 A;  2ROQ A;  3CE7 A;  2K92 A;  2K94 A;  2MVV A;  2KOS A;  2AFD A;  4BPH A;  3LMO A;  5KP6 B;  4BPG A;  2CQ8 A;  2CGQ A;  2CG5 B;  1AF8 A;  2LTE A;  2AFE A;  3RG2 A;  4HKG A;  2N5I A;  2L4B A;  2KOQ A;  1T8K A;  2FAE A;  2KG9 A;  2FVE A;  2FQ1 A;  5HV8 A;  2KG8 A;  2KOP A;  2KGE A;  2MR8 A;  2EHT A;  2L22 A;  5KP8 B;  1ACP A;  4PWV B;  2EHS A;  1VKU A;  2L9F A;  1HY8 A;  2MY5 A;  2VSQ A;  4H2X C;  2K93 A;  1NQ4 A;  2LIU A;  2XZ1 C;  1HQB A;  2PNG A;  2X2B A;  3EJB A;  2MF4 A;  3NY7 B;  2FVA A;  1L0I A;  2K0X A;  2K0Y A;  2KOR A;  2LML A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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