2N5IA

Pltl-pyrrolyl
Total Genus 26
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
26
sequence length
90
structure length
90
Chain Sequence
b'MDGEEVKEKIRRYIMEDLIGPSAKEDELDDQTPLLEWGILNSMNIVKLMVYIRDEMGVSIPSTHITGKYFKDLNAISRTVEQLKAESALE'
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
publication title Structure and Substrate Sequestration in the Pyoluteorin Type II Peptidyl Carrier Protein PltL.
pubmed doi rcsb
molecule keywords Peptidyl carrier protein PltL
source organism Pseudomonas protegens pf-5
molecule tags Transport protein
total genus 26
structure length 90
sequence length 90
ec nomenclature
pdb deposition date 2015-07-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2n5iA00
4R0MA 1L0IA 2KWLA 2JQ4A 5CZDB 2KG9A 1X3OA 2PNGA 2MY5A 1ACPA 2FHSC 2FACA 3NY7B 2AF8A 2FAEA 4H2XC 2N5IA 2KOSA 2XZ0D 2MVVA 3GZMA 2GDYA 1HQBA 2JU2A 1AF8A 2L22A 4PXHB 2LPKA 5HVCA 1NQ4A 4DG9A 2LIUA 2MVUA 4MRTC 2KW2A 2JGPA 4CA3A 2GDXA 2KG6A 2CG5B 2LTEA 2AFEA 2K94A 3EJBA 2M5RA 2MF4A 1HY8A 4BPGA 3EJEA 2KOQA 2EHTA 2FADA 2AVAA 5HV8A 2L0QA 4IZ6A 2CNRA 2N98A 2K0XA 4NEOA 2N6YA 2LKIA 2GDWA 3CE7A 2LMLA 2X2BA 2LIWA 2EHSA 2FVAA 2CQ8A 2KOPA 2VSQA 2FVEA 2MR8A 2KG8A 5KP6B 5KP7B 2KGAA 4H2YC 2FQ0A 1L0HA 1F80D 2KGEA 2L9FA 2N50A 2N6ZA 2L4BA 2CGQA 2K92A 2KGDA 2DNWA 2JU1A 2N5HA 2LOLA 2KORA 4PWVB 1KLPA 2ROQA 5KP8B 2K0YA 2KGCA 4HKGA 1DNYA 2FQ1A 2KOOA 2K2QA 1VKUA 3LMOA 1OR5A 2KR5A 2LL8A 3EJDA 2FVFA 2QNWA 2MD9A 2K93A 4BPHA 3GZLA 1T8KA 3RG2A 4BPFA 5EJDA 2XZ1C 1DV5A 2FQ2A 2MR7A 4H2WC 2AFDA
chains in the Genus database with same CATH superfamily
1YHQP 3B5IA 5CZDB 2PEQA 2MY5A 1VQOP 3G6EP 3HZQA 1VQNP 2P9XA 2EFJA 2FAEA 3I55P 1M74A 2JU2A 2PEMA 2LPKA 1CEIA 1NQ4A 4MRTC 2MVUA 1K30A 4CA3A 2QA4P 2AFEA 5HGNA 3EJBA 4U0AA 1HY8A 3EJEA 2XV6A 1KD1Q 2Z45A 2FADA 2PEKA 2K0XA 3MGEA 4NEOA 3VRLC 1D1DA 1IUQA 4XROA 3HYBA 2KG8A 2M8LA 5KP6B 4H2YC 3H4EA 2FQ0A 2EIAA 3CMEP 2L6EA 1L0HA 1VQ9P 2N6ZA 3DS0A 1Z6MA 2CGQA 2K92A 2KGDA 2BHVA 5BS2A 3NTEA 3G1GA 1GXHA 4PWVB 2ROQA 5KP8B 2K0YA 4WYMA 5JPAA 3M1MA 1VQ4P 5EW5E 3G4SP 2BUOA 3CCSP 1OR5A 3G21A 1A8OA 3G28A 2K93A 1YJNP 2PENA 1T8KA 2FQ2A 2MR7A 4H2WC 4R0MA 4COCA 3CCEP 4GR6A 2M8PA 4XFXA 7CEIA 3OW2O 2OTJP 2FHSC 2GZFA 1W2BO 4H2XC 2N5IA 2KOSA 3CCLP 1HQBA 2L22A 4PXHB 1VQ6P 1BXIA 5HVCA 4DG9A 2K5XA 2LIUA 1VHNA 1QVGO 1K73Q 2K94A 2QEXP 1KQSO 1M1KQ 5HV8A 2N98A 2N6YA 2LKIA 5F2OA 2GDWA 3GJNA 2FVAA 2FVEA 2MR8A 1RO2A 2ERHA 1JJ2O 2L9FA 3H47A 3RG6C 1MZ8A 1VQ5P 2L4BA 1NJIQ 1FR2A 2DNWA 1RNIA 2LOLA 2KORA 2GZJA 1VQPP 1VQMP 2KGCA 1QRJA 2XT1A 1DNYA 3DS5A 2KOOA 3LMOA 2KR5A 3B4QA 3CCMP 3DS1A 2MD9A 1VQLP 2VLPA 4BPHA 1QVFO 1BAJA 1VQ7P 1DV5A 1EOQA 2JYGA 2Z44A 3CCVP 1L0IA 2JYLA 2KWLA 2JQ4A 1X3OA 2PNGA 4XFYA 3NY7B 2ONTA 2OTLP 2XXMA 1M6EX 1AF8A 1YITP 2GDXA 3DTJA 2KG6A 2CG5B 2LTEA 3CC2P 2PEOA 1YI2P 1Q86Q 1YJ9P 4U0DA 4GR2A 2M5RA 5F2NA 2MF4A 1M6NA 4BPGA 3G1IA 2KOQA 2AVAA 2L0QA 4IZ6A 2GZEA 2PEIA 3CE7A 2LMLA 2X2BA 5DCKA 3CPWO 2EHSA 1GPJA 1KC8Q 2CQ8A 1ZMBA 2KOPA 2VSQA 1M90Q 4U0BA 5HGOA 2KGAA 1RO0A 1F80D 1UNKA 1VQ8P 3G0VA 4F37A 3CC4P 2VLQA 1E6JP 1KLPA 1N8RQ 2OARA 3CCJP 2FQ1A 2K2QA 4QKOA 4IPYA 2M8NA 3CXCO 3CCRP 3G29A 3EJDA 4U0CA 2FVFA 2JAZA 2PEJA 2CWOA 3CC7P 4PH1A 2E1MA 5HGMA 5EJDA 1E0HA 4XFZA 1Q81Q 2GZIA 1IMPA 3DS2A 2AFDA 1YIJP 3CMAP 2K0DX 3CD6P 1ZNVA 4COPA 2KG9A 3G71P 1IMQA 1ACPA 2PY8A 2FACA 4U0EA 2AF8A 1EMVA 1Q82Q 1A43A 2GYKA 5F2KA 2XZ0D 2KODA 2MVVA 3GZMA 2GDYA 1VQKP 2NO8A 3LRYA 2JB0A 3DPHA 3E2DA 2KW2A 2JGPA 1AUMA 4QNBA 3WBHA 2LF4A 4M0IA 2EHTA 3DS3A 2CNRA 2WPTA 4U0FA 1Q7YQ 4UHPB 2VLOA 2LIWA 2VLNA 1GXGA 3I56P 4XRQA 3CCUP 3G26A 5HGLA 5KP7B 5BS1A 1S72P 2KGEA 2Z46A 2N50A 1K9MQ 2JU1A 3P05A 2N5HA 3Q20A 3CCQP 1EIAA 2EG5A 4HKGA 3H0DA 1UJZA 1VKUA 3DS4A 2LL8A 3GKLC 4PH0A 2JO0A 3U43A 2QNWA 1YJWP 2GZGA 1AYIA 2DGYA 3GZLA 3RG2A 2JBGA 4BPFA 2XZ1C 5I4TG 1K8AQ
chains in the Genus database with same CATH topology
4R0MA 1L0IA 2KWLA 2JQ4A 5CZDB 2KG9A 1X3OA 2PNGA 2MY5A 1ACPA 2FHSC 2FACA 3NY7B 2AF8A 2FAEA 4H2XC 2N5IA 2KOSA 2XZ0D 2MVVA 3GZMA 2GDYA 1HQBA 2JU2A 1AF8A 2L22A 4PXHB 2LPKA 5HVCA 1NQ4A 4DG9A 2LIUA 2MVUA 4MRTC 2KW2A 2JGPA 4CA3A 2GDXA 2KG6A 2CG5B 2LTEA 2AFEA 2K94A 3EJBA 2M5RA 2MF4A 1HY8A 4BPGA 3EJEA 2KOQA 2EHTA 2FADA 2AVAA 5HV8A 2L0QA 4IZ6A 2CNRA 2N98A 2K0XA 4NEOA 2N6YA 2LKIA 2GDWA 3CE7A 2LMLA 2X2BA 2LIWA 2EHSA 2FVAA 2CQ8A 2KOPA 2VSQA 2FVEA 2MR8A 2KG8A 5KP6B 5KP7B 2KGAA 4H2YC 2FQ0A 1L0HA 1F80D 2KGEA 2L9FA 2N50A 2N6ZA 2L4BA 2CGQA 2K92A 2KGDA 2DNWA 2JU1A 2N5HA 2LOLA 2KORA 4PWVB 1KLPA 2ROQA 5KP8B 2K0YA 2KGCA 4HKGA 1DNYA 2FQ1A 2KOOA 2K2QA 1VKUA 3LMOA 1OR5A 2KR5A 2LL8A 3EJDA 2FVFA 2QNWA 2MD9A 2K93A 4BPHA 3GZLA 1T8KA 3RG2A 4BPFA 5EJDA 2XZ1C 1DV5A 2FQ2A 2MR7A 4H2WC 2AFDA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4R0M A;  1L0I A;  2KWL A;  2JQ4 A;  5CZD B;  2KG9 A;  1X3O A;  2PNG A;  2MY5 A;  1ACP A;  2FHS C;  2FAC A;  3NY7 B;  2AF8 A;  2FAE A;  4H2X C;  2N5I A;  2KOS A;  2XZ0 D;  2MVV A;  3GZM A;  2GDY A;  1HQB A;  2JU2 A;  1AF8 A;  2L22 A;  4PXH B;  2LPK A;  5HVC A;  1NQ4 A;  4DG9 A;  2LIU A;  2MVU A;  4MRT C;  2KW2 A;  2JGP A;  4CA3 A;  2GDX A;  2KG6 A;  2CG5 B;  2LTE A;  2AFE A;  2K94 A;  3EJB A;  2M5R A;  2MF4 A;  1HY8 A;  4BPG A;  3EJE A;  2KOQ A;  2EHT A;  2FAD A;  2AVA A;  5HV8 A;  2L0Q A;  4IZ6 A;  2CNR A;  2N98 A;  2K0X A;  4NEO A;  2N6Y A;  2LKI A;  2GDW A;  3CE7 A;  2LML A;  2X2B A;  2LIW A;  2EHS A;  2FVA A;  2CQ8 A;  2KOP A;  2VSQ A;  2FVE A;  2MR8 A;  2KG8 A;  5KP6 B;  5KP7 B;  2KGA A;  4H2Y C;  2FQ0 A;  1L0H A;  1F80 D;  2KGE A;  2L9F A;  2N50 A;  2N6Z A;  2L4B A;  2CGQ A;  2K92 A;  2KGD A;  2DNW A;  2JU1 A;  2N5H A;  2LOL A;  2KOR A;  4PWV B;  1KLP A;  2ROQ A;  5KP8 B;  2K0Y A;  2KGC A;  4HKG A;  1DNY A;  2FQ1 A;  2KOO A;  2K2Q A;  1VKU A;  3LMO A;  1OR5 A;  2KR5 A;  2LL8 A;  3EJD A;  2FVF A;  2QNW A;  2MD9 A;  2K93 A;  4BPH A;  3GZL A;  1T8K A;  3RG2 A;  4BPF A;  5EJD A;  2XZ1 C;  1DV5 A;  2FQ2 A;  2MR7 A;  4H2W C;  2AFD A; 
#chains in the Genus database with same CATH topology
 1YHQ P;  3B5I A;  5CZD B;  2PEQ A;  2MY5 A;  1VQO P;  3G6E P;  3HZQ A;  1VQN P;  2P9X A;  2EFJ A;  2FAE A;  3I55 P;  1M74 A;  2JU2 A;  2PEM A;  2LPK A;  1CEI A;  1NQ4 A;  4MRT C;  2MVU A;  1K30 A;  4CA3 A;  2QA4 P;  2AFE A;  5HGN A;  3EJB A;  4U0A A;  1HY8 A;  3EJE A;  2XV6 A;  1KD1 Q;  2Z45 A;  2FAD A;  2PEK A;  2K0X A;  3MGE A;  4NEO A;  3VRL C;  1D1D A;  1IUQ A;  4XRO A;  3HYB A;  2KG8 A;  2M8L A;  5KP6 B;  4H2Y C;  3H4E A;  2FQ0 A;  2EIA A;  3CME P;  2L6E A;  1L0H A;  1VQ9 P;  2N6Z A;  3DS0 A;  1Z6M A;  2CGQ A;  2K92 A;  2KGD A;  2BHV A;  5BS2 A;  3NTE A;  3G1G A;  1GXH A;  4PWV B;  2ROQ A;  5KP8 B;  2K0Y A;  4WYM A;  5JPA A;  3M1M A;  1VQ4 P;  5EW5 E;  3G4S P;  2BUO A;  3CCS P;  1OR5 A;  3G21 A;  1A8O A;  3G28 A;  2K93 A;  1YJN P;  2PEN A;  1T8K A;  2FQ2 A;  2MR7 A;  4H2W C;  4R0M A;  4COC A;  3CCE P;  4GR6 A;  2M8P A;  4XFX A;  7CEI A;  3OW2 O;  2OTJ P;  2FHS C;  2GZF A;  1W2B O;  4H2X C;  2N5I A;  2KOS A;  3CCL P;  1HQB A;  2L22 A;  4PXH B;  1VQ6 P;  1BXI A;  5HVC A;  4DG9 A;  2K5X A;  2LIU A;  1VHN A;  1QVG O;  1K73 Q;  2K94 A;  2QEX P;  1KQS O;  1M1K Q;  5HV8 A;  2N98 A;  2N6Y A;  2LKI A;  5F2O A;  2GDW A;  3GJN A;  2FVA A;  2FVE A;  2MR8 A;  1RO2 A;  2ERH A;  1JJ2 O;  2L9F A;  3H47 A;  3RG6 C;  1MZ8 A;  1VQ5 P;  2L4B A;  1NJI Q;  1FR2 A;  2DNW A;  1RNI A;  2LOL A;  2KOR A;  2GZJ A;  1VQP P;  1VQM P;  2KGC A;  1QRJ A;  2XT1 A;  1DNY A;  3DS5 A;  2KOO A;  3LMO A;  2KR5 A;  3B4Q A;  3CCM P;  3DS1 A;  2MD9 A;  1VQL P;  2VLP A;  4BPH A;  1QVF O;  1BAJ A;  1VQ7 P;  1DV5 A;  1EOQ A;  2JYG A;  2Z44 A;  3CCV P;  1L0I A;  2JYL A;  2KWL A;  2JQ4 A;  1X3O A;  2PNG A;  4XFY A;  3NY7 B;  2ONT A;  2OTL P;  2XXM A;  1M6E X;  1AF8 A;  1YIT P;  2GDX A;  3DTJ A;  2KG6 A;  2CG5 B;  2LTE A;  3CC2 P;  2PEO A;  1YI2 P;  1Q86 Q;  1YJ9 P;  4U0D A;  4GR2 A;  2M5R A;  5F2N A;  2MF4 A;  1M6N A;  4BPG A;  3G1I A;  2KOQ A;  2AVA A;  2L0Q A;  4IZ6 A;  2GZE A;  2PEI A;  3CE7 A;  2LML A;  2X2B A;  5DCK A;  3CPW O;  2EHS A;  1GPJ A;  1KC8 Q;  2CQ8 A;  1ZMB A;  2KOP A;  2VSQ A;  1M90 Q;  4U0B A;  5HGO A;  2KGA A;  1RO0 A;  1F80 D;  1UNK A;  1VQ8 P;  3G0V A;  4F37 A;  3CC4 P;  2VLQ A;  1E6J P;  1KLP A;  1N8R Q;  2OAR A;  3CCJ P;  2FQ1 A;  2K2Q A;  4QKO A;  4IPY A;  2M8N A;  3CXC O;  3CCR P;  3G29 A;  3EJD A;  4U0C A;  2FVF A;  2JAZ A;  2PEJ A;  2CWO A;  3CC7 P;  4PH1 A;  2E1M A;  5HGM A;  5EJD A;  1E0H A;  4XFZ A;  1Q81 Q;  2GZI A;  1IMP A;  3DS2 A;  2AFD A;  1YIJ P;  3CMA P;  2K0D X;  3CD6 P;  1ZNV A;  4COP A;  2KG9 A;  3G71 P;  1IMQ A;  1ACP A;  2PY8 A;  2FAC A;  4U0E A;  2AF8 A;  1EMV A;  1Q82 Q;  1A43 A;  2GYK A;  5F2K A;  2XZ0 D;  2KOD A;  2MVV A;  3GZM A;  2GDY A;  1VQK P;  2NO8 A;  3LRY A;  2JB0 A;  3DPH A;  3E2D A;  2KW2 A;  2JGP A;  1AUM A;  4QNB A;  3WBH A;  2LF4 A;  4M0I A;  2EHT A;  3DS3 A;  2CNR A;  2WPT A;  4U0F A;  1Q7Y Q;  4UHP B;  2VLO A;  2LIW A;  2VLN A;  1GXG A;  3I56 P;  4XRQ A;  3CCU P;  3G26 A;  5HGL A;  5KP7 B;  5BS1 A;  1S72 P;  2KGE A;  2Z46 A;  2N50 A;  1K9M Q;  2JU1 A;  3P05 A;  2N5H A;  3Q20 A;  3CCQ P;  1EIA A;  2EG5 A;  4HKG A;  3H0D A;  1UJZ A;  1VKU A;  3DS4 A;  2LL8 A;  3GKL C;  4PH0 A;  2JO0 A;  3U43 A;  2QNW A;  1YJW P;  2GZG A;  1AYI A;  2DGY A;  3GZL A;  3RG2 A;  2JBG A;  4BPF A;  2XZ1 C;  5I4T G;  1K8A Q; 
#chains in the Genus database with same CATH homology
 4R0M A;  1L0I A;  2KWL A;  2JQ4 A;  5CZD B;  2KG9 A;  1X3O A;  2PNG A;  2MY5 A;  1ACP A;  2FHS C;  2FAC A;  3NY7 B;  2AF8 A;  2FAE A;  4H2X C;  2N5I A;  2KOS A;  2XZ0 D;  2MVV A;  3GZM A;  2GDY A;  1HQB A;  2JU2 A;  1AF8 A;  2L22 A;  4PXH B;  2LPK A;  5HVC A;  1NQ4 A;  4DG9 A;  2LIU A;  2MVU A;  4MRT C;  2KW2 A;  2JGP A;  4CA3 A;  2GDX A;  2KG6 A;  2CG5 B;  2LTE A;  2AFE A;  2K94 A;  3EJB A;  2M5R A;  2MF4 A;  1HY8 A;  4BPG A;  3EJE A;  2KOQ A;  2EHT A;  2FAD A;  2AVA A;  5HV8 A;  2L0Q A;  4IZ6 A;  2CNR A;  2N98 A;  2K0X A;  4NEO A;  2N6Y A;  2LKI A;  2GDW A;  3CE7 A;  2LML A;  2X2B A;  2LIW A;  2EHS A;  2FVA A;  2CQ8 A;  2KOP A;  2VSQ A;  2FVE A;  2MR8 A;  2KG8 A;  5KP6 B;  5KP7 B;  2KGA A;  4H2Y C;  2FQ0 A;  1L0H A;  1F80 D;  2KGE A;  2L9F A;  2N50 A;  2N6Z A;  2L4B A;  2CGQ A;  2K92 A;  2KGD A;  2DNW A;  2JU1 A;  2N5H A;  2LOL A;  2KOR A;  4PWV B;  1KLP A;  2ROQ A;  5KP8 B;  2K0Y A;  2KGC A;  4HKG A;  1DNY A;  2FQ1 A;  2KOO A;  2K2Q A;  1VKU A;  3LMO A;  1OR5 A;  2KR5 A;  2LL8 A;  3EJD A;  2FVF A;  2QNW A;  2MD9 A;  2K93 A;  4BPH A;  3GZL A;  1T8K A;  3RG2 A;  4BPF A;  5EJD A;  2XZ1 C;  1DV5 A;  2FQ2 A;  2MR7 A;  4H2W C;  2AFD A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...