2JU1A

Solution structure of acyl carrier protein domain from module 2 of 6-deoxyerythronolide b synthase (debs)
Total Genus 22
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
22
sequence length
95
structure length
95
Chain Sequence
GSHMLRDRLAGLPRAERTAELVRLVRTSTATVLGHDDPKAVRATTPFKELGFDSLAAVRLRNLLNAATGLRLPSTLVFDHPNASAVAGFLDAELG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
source organism Saccharopolyspora erythraea
publication title Solution structure and proposed domain domain recognition interface of an acyl carrier protein domain from a modular polyketide synthase.
pubmed doi rcsb
molecule keywords Erythronolide synthase
total genus 22
structure length 95
sequence length 95
ec nomenclature ec 2.3.1.94: 6-deoxyerythronolide-B synthase.
pdb deposition date 2007-08-12

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2ju1A00
2AFEA 2CQ8A 1HQBA 1F80D 2N6YA 4BPGA 2KOSA 1DNYA 2QNWA 2MR8A 2XZ0D 2JGPA 1HY8A 2KGEA 4BPFA 5HVCA 2KG9A 1VKUA 4PXHB 2KWLA 2KG8A 2MR7A 2N6ZA 2K0XA 2FAEA 4PWVB 5HV8A 1X3OA 2AVAA 3EJEA 2KW2A 3NY7B 2JU1A 3GZMA 1AF8A 1OR5A 2N5IA 4H2YC 2CGQA 2X2BA 1KLPA 2K93A 2KGCA 4HKGA 2GDWA 2FADA 2FQ2A 2KOOA 2MD9A 2FACA 4MRTC 4NEOA 4CA3A 2PNGA 2CG5B 2GDXA 3EJDA 2FQ0A 2LIWA 2LKIA 4BPHA 2KGDA 2LTEA 2MY5A 2LIUA 2M5RA 2CNRA 2KG6A 2MF4A 2L0QA 3CE7A 2KOQA 5KP8B 4H2XC 1ACPA 2L9FA 2FVAA 2KR5A 2FVEA 2KORA 4IZ6A 2JQ4A 2L22A 2LOLA 2JU2A 2K94A 2LL8A 2N5HA 2XZ1C 4H2WC 2GDYA 2ROQA 5CZDB 3EJBA 5KP7B 5KP6B 1T8KA 2LPKA 2LMLA 1DV5A 2FHSC 2DNWA 2FVFA 2KOPA 2K0YA 4R0MA 2N50A 1NQ4A 3LMOA 2MVUA 2AF8A 2K92A 1L0IA 2MVVA 2FQ1A 2KGAA 3RG2A 2VSQA 2AFDA 2L4BA 3GZLA 2EHTA 2EHSA 2K2QA 2N98A 4DG9A 1L0HA 5EJDA
chains in the Genus database with same CATH superfamily
2CQ8A 1F80D 4U0EA 2JB0A 1VQ9P 2MR8A 3I55P 2VLNA 2JGPA 4QKOA 2K5XA 1KC8Q 1HY8A 3DS3A 4PH1A 2MR7A 2OTJP 2DGYA 1X3OA 5HGNA 2JU1A 3GZMA 2Z45A 1E0HA 2X2BA 1KLPA 3HYBA 5F2KA 2QA4P 3CCJP 1IMPA 3CC7P 3EJDA 3CD6P 7CEIA 1M6EX 4BPHA 1Q81Q 5HGMA 2PEIA 3B4QA 5F2NA 1ACPA 2XT1A 2FVEA 1ZMBA 4M0IA 2KORA 1EMVA 4U0DA 1VQOP 3CCLP 2LL8A 2ERHA 2XZ1C 2GDYA 5CZDB 1BXIA 2VLQA 4XFXA 3G71P 1EIAA 1NQ4A 2EG5A 2LF4A 2L6EA 4QNBA 1ZNVA 4F37A 1S72P 1K8AQ 2FQ1A 3G1IA 3DS0A 2AFDA 2L4BA 5I4TG 3B5IA 2EHSA 1RO0A 1YIJP 2N98A 2JYLA 1AYIA 2AFEA 1HQBA 2N6YA 1GPJA 1D1DA 2M8LA 2QNWA 2XZ0D 1K9MQ 1YJNP 4BPFA 5HVCA 2KG9A 2WPTA 2K0XA 2FAEA 4PWVB 2AVAA 3EJEA 2NO8A 1Q82Q 1Z6MA 1KQSO 3GKLC 3GJNA 2FADA 2FQ2A 3RG6C 4NEOA 1YITP 1RO2A 3CMEP 2PNGA 3M1MA 5HGLA 2GDXA 3U43A 3G1GA 1QRJA 2KGDA 2LTEA 4IPYA 1VHNA 2LIUA 2VLOA 2KG6A 4U0BA 2EFJA 4XRQA 2PENA 2JQ4A 1VQLP 1YJ9P 3CC4P 3DPHA 2QEXP 2PEJA 2N5HA 2GZEA 2E1MA 4U0CA 5KP7B 5KP6B 2LMLA 4WYMA 1DV5A 2FHSC 5BS1A 1VQ7P 3CXCO 2DNWA 1MZ8A 4U0FA 4GR2A 1VQ8P 3LMOA 1VQNP 2K92A 1L0IA 1GXGA 3MGEA 2KGAA 1RNIA 1A8OA 2M8PA 4COPA 2XXMA 5BS2A 4DG9A 1L0HA 3DS4A 3DTJA 1CEIA 3CCUP 4BPGA 2P9XA 2KOSA 1M1KQ 3G21A 1DNYA 3Q20A 2KGEA 4GR6A 1VKUA 2KWLA 3CMAP 2KG8A 2N6ZA 2EIAA 5JPAA 2JO0A 1Q86Q 3NY7B 1BAJA 2PEKA 3CCRP 3P05A 1VQ4P 1VQKP 2VLPA 2BHVA 2PEOA 4HKGA 1Q7YQ 2KOOA 1YJWP 2MD9A 2FACA 2CWOA 1K73Q 4CA3A 1A43A 2GZFA 2FQ0A 5EW5E 1VQ5P 1M6NA 3I56P 2MF4A 2L0QA 1NJIQ 2JBGA 2KOQA 3DS5A 1QVFO 2L9FA 2FVAA 2KR5A 3E2DA 3H47A 2L22A 2PEMA 2JU2A 3G0VA 2M8NA 3CCSP 1E6JP 4XROA 3CPWO 2Z46A 3CCEP 3H0DA 3NTEA 2FVFA 2KOPA 2K0YA 2N50A 3G4SP 2AF8A 2ONTA 2JAZA 2MVVA 2Z44A 5F2OA 1JJ2O 3GZLA 2EHTA 2K2QA 3H4EA 3CCVP 5EJDA 2KODA 3WBHA 1K30A 3CCMP 3OW2O 3LRYA 2PY8A 1YHQP 1UNKA 1W2BO 4PH0A 4PXHB 5HV8A 2GYKA 2XV6A 2JYGA 2KW2A 4XFYA 1AF8A 5DCKA 1OR5A 3VRLC 2N5IA 4H2YC 2CGQA 3CCQP 2K93A 1M90Q 1VQMP 2KGCA 2GDWA 4COCA 2BUOA 2K0DX 4MRTC 1VQ6P 2CG5B 5HGOA 2LIWA 1N8RQ 2LKIA 4XFZA 2MY5A 1EOQA 2M5RA 2CNRA 3CE7A 2GZGA 5KP8B 4H2XC 2OTLP 1FR2A 3DS2A 1IUQA 4IZ6A 1QVGO 2LOLA 1GXHA 2GZIA 1M74A 2K94A 3G29A 3G26A 4H2WC 2ROQA 2PEQA 3G6EP 3EJBA 4U0AA 3DS1A 1KD1Q 1T8KA 3CC2P 2LPKA 1VQPP 2OARA 4R0MA 1YI2P 1UJZA 4UHPB 2MVUA 3HZQA 3RG2A 2VSQA 2GZJA 1IMQA 1AUMA 3G28A
chains in the Genus database with same CATH topology
2AFEA 2CQ8A 1HQBA 1F80D 2N6YA 4BPGA 2KOSA 1DNYA 2QNWA 2MR8A 2XZ0D 2JGPA 1HY8A 2KGEA 4BPFA 5HVCA 2KG9A 1VKUA 4PXHB 2KWLA 2KG8A 2MR7A 2N6ZA 2K0XA 2FAEA 4PWVB 5HV8A 1X3OA 2AVAA 3EJEA 2KW2A 3NY7B 2JU1A 3GZMA 1AF8A 1OR5A 2N5IA 4H2YC 2CGQA 2X2BA 1KLPA 2K93A 2KGCA 4HKGA 2GDWA 2FADA 2FQ2A 2KOOA 2MD9A 2FACA 4MRTC 4NEOA 4CA3A 2PNGA 2CG5B 2GDXA 3EJDA 2FQ0A 2LIWA 2LKIA 4BPHA 2KGDA 2LTEA 2MY5A 2LIUA 2M5RA 2CNRA 2KG6A 2MF4A 2L0QA 3CE7A 2KOQA 5KP8B 4H2XC 1ACPA 2L9FA 2FVAA 2KR5A 2FVEA 2KORA 4IZ6A 2JQ4A 2L22A 2LOLA 2JU2A 2K94A 2LL8A 2N5HA 2XZ1C 4H2WC 2GDYA 2ROQA 5CZDB 3EJBA 5KP7B 5KP6B 1T8KA 2LPKA 2LMLA 1DV5A 2FHSC 2DNWA 2FVFA 2KOPA 2K0YA 4R0MA 2N50A 1NQ4A 3LMOA 2MVUA 2AF8A 2K92A 1L0IA 2MVVA 2FQ1A 2KGAA 3RG2A 2VSQA 2AFDA 2L4BA 3GZLA 2EHTA 2EHSA 2K2QA 2N98A 4DG9A 1L0HA 5EJDA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2AFE A;  2CQ8 A;  1HQB A;  1F80 D;  2N6Y A;  4BPG A;  2KOS A;  1DNY A;  2QNW A;  2MR8 A;  2XZ0 D;  2JGP A;  1HY8 A;  2KGE A;  4BPF A;  5HVC A;  2KG9 A;  1VKU A;  4PXH B;  2KWL A;  2KG8 A;  2MR7 A;  2N6Z A;  2K0X A;  2FAE A;  4PWV B;  5HV8 A;  1X3O A;  2AVA A;  3EJE A;  2KW2 A;  3NY7 B;  2JU1 A;  3GZM A;  1AF8 A;  1OR5 A;  2N5I A;  4H2Y C;  2CGQ A;  2X2B A;  1KLP A;  2K93 A;  2KGC A;  4HKG A;  2GDW A;  2FAD A;  2FQ2 A;  2KOO A;  2MD9 A;  2FAC A;  4MRT C;  4NEO A;  4CA3 A;  2PNG A;  2CG5 B;  2GDX A;  3EJD A;  2FQ0 A;  2LIW A;  2LKI A;  4BPH A;  2KGD A;  2LTE A;  2MY5 A;  2LIU A;  2M5R A;  2CNR A;  2KG6 A;  2MF4 A;  2L0Q A;  3CE7 A;  2KOQ A;  5KP8 B;  4H2X C;  1ACP A;  2L9F A;  2FVA A;  2KR5 A;  2FVE A;  2KOR A;  4IZ6 A;  2JQ4 A;  2L22 A;  2LOL A;  2JU2 A;  2K94 A;  2LL8 A;  2N5H A;  2XZ1 C;  4H2W C;  2GDY A;  2ROQ A;  5CZD B;  3EJB A;  5KP7 B;  5KP6 B;  1T8K A;  2LPK A;  2LML A;  1DV5 A;  2FHS C;  2DNW A;  2FVF A;  2KOP A;  2K0Y A;  4R0M A;  2N50 A;  1NQ4 A;  3LMO A;  2MVU A;  2AF8 A;  2K92 A;  1L0I A;  2MVV A;  2FQ1 A;  2KGA A;  3RG2 A;  2VSQ A;  2AFD A;  2L4B A;  3GZL A;  2EHT A;  2EHS A;  2K2Q A;  2N98 A;  4DG9 A;  1L0H A;  5EJD A; 
#chains in the Genus database with same CATH topology
 2CQ8 A;  1F80 D;  4U0E A;  2JB0 A;  1VQ9 P;  2MR8 A;  3I55 P;  2VLN A;  2JGP A;  4QKO A;  2K5X A;  1KC8 Q;  1HY8 A;  3DS3 A;  4PH1 A;  2MR7 A;  2OTJ P;  2DGY A;  1X3O A;  5HGN A;  2JU1 A;  3GZM A;  2Z45 A;  1E0H A;  2X2B A;  1KLP A;  3HYB A;  5F2K A;  2QA4 P;  3CCJ P;  1IMP A;  3CC7 P;  3EJD A;  3CD6 P;  7CEI A;  1M6E X;  4BPH A;  1Q81 Q;  5HGM A;  2PEI A;  3B4Q A;  5F2N A;  1ACP A;  2XT1 A;  2FVE A;  1ZMB A;  4M0I A;  2KOR A;  1EMV A;  4U0D A;  1VQO P;  3CCL P;  2LL8 A;  2ERH A;  2XZ1 C;  2GDY A;  5CZD B;  1BXI A;  2VLQ A;  4XFX A;  3G71 P;  1EIA A;  1NQ4 A;  2EG5 A;  2LF4 A;  2L6E A;  4QNB A;  1ZNV A;  4F37 A;  1S72 P;  1K8A Q;  2FQ1 A;  3G1I A;  3DS0 A;  2AFD A;  2L4B A;  5I4T G;  3B5I A;  2EHS A;  1RO0 A;  1YIJ P;  2N98 A;  2JYL A;  1AYI A;  2AFE A;  1HQB A;  2N6Y A;  1GPJ A;  1D1D A;  2M8L A;  2QNW A;  2XZ0 D;  1K9M Q;  1YJN P;  4BPF A;  5HVC A;  2KG9 A;  2WPT A;  2K0X A;  2FAE A;  4PWV B;  2AVA A;  3EJE A;  2NO8 A;  1Q82 Q;  1Z6M A;  1KQS O;  3GKL C;  3GJN A;  2FAD A;  2FQ2 A;  3RG6 C;  4NEO A;  1YIT P;  1RO2 A;  3CME P;  2PNG A;  3M1M A;  5HGL A;  2GDX A;  3U43 A;  3G1G A;  1QRJ A;  2KGD A;  2LTE A;  4IPY A;  1VHN A;  2LIU A;  2VLO A;  2KG6 A;  4U0B A;  2EFJ A;  4XRQ A;  2PEN A;  2JQ4 A;  1VQL P;  1YJ9 P;  3CC4 P;  3DPH A;  2QEX P;  2PEJ A;  2N5H A;  2GZE A;  2E1M A;  4U0C A;  5KP7 B;  5KP6 B;  2LML A;  4WYM A;  1DV5 A;  2FHS C;  5BS1 A;  1VQ7 P;  3CXC O;  2DNW A;  1MZ8 A;  4U0F A;  4GR2 A;  1VQ8 P;  3LMO A;  1VQN P;  2K92 A;  1L0I A;  1GXG A;  3MGE A;  2KGA A;  1RNI A;  1A8O A;  2M8P A;  4COP A;  2XXM A;  5BS2 A;  4DG9 A;  1L0H A;  3DS4 A;  3DTJ A;  1CEI A;  3CCU P;  4BPG A;  2P9X A;  2KOS A;  1M1K Q;  3G21 A;  1DNY A;  3Q20 A;  2KGE A;  4GR6 A;  1VKU A;  2KWL A;  3CMA P;  2KG8 A;  2N6Z A;  2EIA A;  5JPA A;  2JO0 A;  1Q86 Q;  3NY7 B;  1BAJ A;  2PEK A;  3CCR P;  3P05 A;  1VQ4 P;  1VQK P;  2VLP A;  2BHV A;  2PEO A;  4HKG A;  1Q7Y Q;  2KOO A;  1YJW P;  2MD9 A;  2FAC A;  2CWO A;  1K73 Q;  4CA3 A;  1A43 A;  2GZF A;  2FQ0 A;  5EW5 E;  1VQ5 P;  1M6N A;  3I56 P;  2MF4 A;  2L0Q A;  1NJI Q;  2JBG A;  2KOQ A;  3DS5 A;  1QVF O;  2L9F A;  2FVA A;  2KR5 A;  3E2D A;  3H47 A;  2L22 A;  2PEM A;  2JU2 A;  3G0V A;  2M8N A;  3CCS P;  1E6J P;  4XRO A;  3CPW O;  2Z46 A;  3CCE P;  3H0D A;  3NTE A;  2FVF A;  2KOP A;  2K0Y A;  2N50 A;  3G4S P;  2AF8 A;  2ONT A;  2JAZ A;  2MVV A;  2Z44 A;  5F2O A;  1JJ2 O;  3GZL A;  2EHT A;  2K2Q A;  3H4E A;  3CCV P;  5EJD A;  2KOD A;  3WBH A;  1K30 A;  3CCM P;  3OW2 O;  3LRY A;  2PY8 A;  1YHQ P;  1UNK A;  1W2B O;  4PH0 A;  4PXH B;  5HV8 A;  2GYK A;  2XV6 A;  2JYG A;  2KW2 A;  4XFY A;  1AF8 A;  5DCK A;  1OR5 A;  3VRL C;  2N5I A;  4H2Y C;  2CGQ A;  3CCQ P;  2K93 A;  1M90 Q;  1VQM P;  2KGC A;  2GDW A;  4COC A;  2BUO A;  2K0D X;  4MRT C;  1VQ6 P;  2CG5 B;  5HGO A;  2LIW A;  1N8R Q;  2LKI A;  4XFZ A;  2MY5 A;  1EOQ A;  2M5R A;  2CNR A;  3CE7 A;  2GZG A;  5KP8 B;  4H2X C;  2OTL P;  1FR2 A;  3DS2 A;  1IUQ A;  4IZ6 A;  1QVG O;  2LOL A;  1GXH A;  2GZI A;  1M74 A;  2K94 A;  3G29 A;  3G26 A;  4H2W C;  2ROQ A;  2PEQ A;  3G6E P;  3EJB A;  4U0A A;  3DS1 A;  1KD1 Q;  1T8K A;  3CC2 P;  2LPK A;  1VQP P;  2OAR A;  4R0M A;  1YI2 P;  1UJZ A;  4UHP B;  2MVU A;  3HZQ A;  3RG2 A;  2VSQ A;  2GZJ A;  1IMQ A;  1AUM A;  3G28 A; 
#chains in the Genus database with same CATH homology
 2AFE A;  2CQ8 A;  1HQB A;  1F80 D;  2N6Y A;  4BPG A;  2KOS A;  1DNY A;  2QNW A;  2MR8 A;  2XZ0 D;  2JGP A;  1HY8 A;  2KGE A;  4BPF A;  5HVC A;  2KG9 A;  1VKU A;  4PXH B;  2KWL A;  2KG8 A;  2MR7 A;  2N6Z A;  2K0X A;  2FAE A;  4PWV B;  5HV8 A;  1X3O A;  2AVA A;  3EJE A;  2KW2 A;  3NY7 B;  2JU1 A;  3GZM A;  1AF8 A;  1OR5 A;  2N5I A;  4H2Y C;  2CGQ A;  2X2B A;  1KLP A;  2K93 A;  2KGC A;  4HKG A;  2GDW A;  2FAD A;  2FQ2 A;  2KOO A;  2MD9 A;  2FAC A;  4MRT C;  4NEO A;  4CA3 A;  2PNG A;  2CG5 B;  2GDX A;  3EJD A;  2FQ0 A;  2LIW A;  2LKI A;  4BPH A;  2KGD A;  2LTE A;  2MY5 A;  2LIU A;  2M5R A;  2CNR A;  2KG6 A;  2MF4 A;  2L0Q A;  3CE7 A;  2KOQ A;  5KP8 B;  4H2X C;  1ACP A;  2L9F A;  2FVA A;  2KR5 A;  2FVE A;  2KOR A;  4IZ6 A;  2JQ4 A;  2L22 A;  2LOL A;  2JU2 A;  2K94 A;  2LL8 A;  2N5H A;  2XZ1 C;  4H2W C;  2GDY A;  2ROQ A;  5CZD B;  3EJB A;  5KP7 B;  5KP6 B;  1T8K A;  2LPK A;  2LML A;  1DV5 A;  2FHS C;  2DNW A;  2FVF A;  2KOP A;  2K0Y A;  4R0M A;  2N50 A;  1NQ4 A;  3LMO A;  2MVU A;  2AF8 A;  2K92 A;  1L0I A;  2MVV A;  2FQ1 A;  2KGA A;  3RG2 A;  2VSQ A;  2AFD A;  2L4B A;  3GZL A;  2EHT A;  2EHS A;  2K2Q A;  2N98 A;  4DG9 A;  1L0H A;  5EJD A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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