2AF8A

Actinorhodin polyketide synthase acyl carrier protein from streptomyces coelicolor a3(2), nmr, minimized average structure
Total Genus 15
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
15
sequence length
86
structure length
86
Chain Sequence
MATLLTTDDLRRALVECAGETDGTDLSGDFLDLRFEDIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLINGALAEAA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Solution structure of the actinorhodin polyketide synthase acyl carrier protein from Streptomyces coelicolor A3(2).
pubmed doi rcsb
source organism Streptomyces coelicolor
molecule tags Antibiotic biosynthesis
molecule keywords ACTINORHODIN POLYKETIDE SYNTHASE ACYL CARRIER PROTEIN
total genus 15
structure length 86
sequence length 86
ec nomenclature
pdb deposition date 1997-03-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2af8A00
2QNWA 2N5HA 4H2XC 2KG9A 2KR5A 4HKGA 2MVVA 5KP8B 1T8KA 2AVAA 2KOQA 2LMLA 2ROQA 2AFEA 4PXHB 2KG8A 2VSQA 2KG6A 2FQ2A 2KWLA 2KGAA 4BPGA 2MD9A 3EJEA 1VKUA 3RG2A 5KP7B 2KGDA 2K93A 2KW2A 2LTEA 4CA3A 2JQ4A 2FACA 1HQBA 4PWVB 1OR5A 3LMOA 5CZDB 2K2QA 2FADA 2GDWA 2EHSA 2KOSA 2L22A 2EHTA 5HVCA 4BPHA 2JU1A 2XZ0D 2N98A 2FVFA 1HY8A 2CGQA 5HV8A 2FHSC 1L0HA 2MF4A 2K0YA 2MVUA 2X2BA 3GZLA 2L4BA 2LPKA 1KLPA 1L0IA 2AFDA 2N6ZA 4MRTC 2KGEA 2JGPA 2FQ0A 2K94A 2KOOA 2LOLA 2FVAA 1ACPA 4H2WC 2JU2A 1DNYA 2KORA 3NY7B 2MY5A 2GDXA 2MR8A 1NQ4A 2PNGA 3GZMA 3EJBA 5KP6B 2K92A 2M5RA 5EJDA 1F80D 3EJDA 2N6YA 1X3OA 2LIWA 4R0MA 4H2YC 2LKIA 3CE7A 2LL8A 2MR7A 2LIUA 1AF8A 2L9FA 2FVEA 2DNWA 2KGCA 4IZ6A 4BPFA 1DV5A 2CNRA 2L0QA 2K0XA 2CG5B 4NEOA 2KOPA 2GDYA 2XZ1C 2FAEA 2CQ8A 4DG9A 2N50A 2AF8A 2FQ1A 2N5IA
chains in the Genus database with same CATH superfamily
3DS2A 2QNWA 2M8LA 1YJ9P 2EFJA 1MZ8A 5KP8B 2AVAA 2KOQA 2KG6A 2VLQA 4BPGA 2OARA 3EJEA 1VKUA 3RG2A 5F2OA 1QRJA 2KW2A 1E0HA 3DS5A 2FACA 2EIAA 2EHSA 2KOSA 2L22A 3CCSP 3E2DA 1K9MQ 1VQ9P 4WYMA 5HGNA 2FVFA 3P05A 2EG5A 2XV6A 3CXCO 3B5IA 2GZJA 2MF4A 1IMPA 3GZLA 1Q7YQ 1RO0A 2L4BA 2PENA 2AFDA 1E6JP 1VQ6P 2KGEA 2E1MA 3DS3A 4QKOA 1YI2P 2FQ0A 1AUMA 3WBHA 1AYIA 2LOLA 2JYGA 4H2WC 2GZFA 2JO0A 1YITP 4GR2A 1NQ4A 2PEOA 2K0DX 3EJBA 2K92A 2PEKA 1VQOP 4QNBA 3CMEP 3G21A 1F80D 2WPTA 3CC7P 3CCMP 2LIWA 1Q82Q 3CMAP 3CE7A 2FVEA 3DS0A 2BUOA 3CC4P 2L0QA 2PEIA 4NEOA 1M90Q 2GZIA 3I56P 1VQNP 3Q20A 2ROQA 1VQMP 5HGLA 4H2XC 2KG9A 1YIJP 4HKGA 1EIAA 2LMLA 2AFEA 5BS1A 2NO8A 1M6NA 2FQ2A 4UHPB 2KGAA 3LRYA 2MD9A 3NTEA 1A43A 5KP7B 5F2NA 2K93A 2LTEA 4CA3A 2QA4P 1HQBA 1VHNA 1OR5A 4XRQA 2GDWA 2EHTA 2CWOA 2JU1A 2XZ0D 2JBGA 1HY8A 1Q86Q 2FHSC 3CCQP 2Z45A 3G1GA 2K0YA 2GZEA 2JYLA 2MVUA 4COPA 2GYKA 1BAJA 1L0IA 3CC2P 2N6ZA 3HYBA 1IUQA 2OTLP 1Z6MA 2JU2A 2KORA 1EOQA 2MR8A 2M8NA 2L6EA 5EJDA 2P9XA 1KC8Q 2N6YA 1X3OA 1S72P 4XFZA 4R0MA 3CCJP 1NJIQ 3H4EA 2MR7A 3CCLP 1AF8A 1RNIA 3M1MA 2L9FA 1DV5A 4U0CA 2K0XA 2CQ8A 4DG9A 4COCA 2N50A 2PEJA 3G0VA 1KLPA 1KQSO 3OW2O 2ONTA 2KR5A 3H47A 3HZQA 2MVVA 2PEQA 1K8AQ 4PXHB 1FR2A 2KG8A 2VSQA 1EMVA 3RG6C 4U0DA 1Q81Q 2KGDA 2Z46A 3CCEP 4PWVB 7CEIA 2KODA 2DGYA 2K2QA 3CCRP 2PEMA 2LF4A 2Z44A 4BPHA 2K5XA 3G26A 2N98A 2CGQA 5HV8A 3MGEA 1M74A 5HGMA 3GJNA 2X2BA 1UNKA 3B4QA 2LPKA 2XXMA 2ERHA 5DCKA 2OTJP 4U0EA 2KOOA 1RO2A 1VQ5P 1DNYA 3I55P 2GDXA 2PNGA 4GR6A 2JAZA 2XT1A 4XFYA 1W2BO 4H2YC 1UJZA 3DTJA 1A8OA 1QVFO 2DNWA 1K73Q 2VLPA 3U43A 1VQPP 2VLOA 2BHVA 2AF8A 2GZGA 2FQ1A 3GKLC 3G6EP 1VQ8P 2N5HA 4PH1A 5EW5E 5F2KA 1T8KA 3G29A 2JB0A 3DS4A 4U0BA 4XFXA 4F37A 2KWLA 1GXGA 3H0DA 2M8PA 3DS1A 4U0AA 1N8RQ 1VQKP 2JQ4A 3LMOA 5CZDB 3CD6P 3CPWO 2FADA 5HVCA 2PY8A 1GXHA 1D1DA 1ZMBA 1VQLP 2VLNA 3G4SP 1IMQA 4IPYA 1L0HA 1YJWP 4XROA 3CCVP 4PH0A 3G1IA 4MRTC 1YJNP 1CEIA 2JGPA 4U0FA 1GPJA 2K94A 1VQ7P 2FVAA 1VQ4P 1ACPA 3VRLC 1YHQP 3NY7B 1BXIA 2MY5A 1QVGO 4M0IA 3GZMA 5KP6B 2M5RA 3G28A 3CCUP 3EJDA 5I4TG 1JJ2O 2LKIA 2LL8A 2LIUA 1M6EX 2KGCA 3G71P 1ZNVA 4IZ6A 1M1KQ 4BPFA 2CNRA 3DPHA 5JPAA 2QEXP 1KD1Q 1K30A 2CG5B 2KOPA 2GDYA 2XZ1C 5HGOA 2FAEA 5BS2A 2N5IA
chains in the Genus database with same CATH topology
2QNWA 2N5HA 4H2XC 2KG9A 2KR5A 4HKGA 2MVVA 5KP8B 1T8KA 2AVAA 2KOQA 2LMLA 2ROQA 2AFEA 4PXHB 2KG8A 2VSQA 2KG6A 2FQ2A 2KWLA 2KGAA 4BPGA 2MD9A 3EJEA 1VKUA 3RG2A 5KP7B 2KGDA 2K93A 2KW2A 2LTEA 4CA3A 2JQ4A 2FACA 1HQBA 4PWVB 1OR5A 3LMOA 5CZDB 2K2QA 2FADA 2GDWA 2EHSA 2KOSA 2L22A 2EHTA 5HVCA 4BPHA 2JU1A 2XZ0D 2N98A 2FVFA 1HY8A 2CGQA 5HV8A 2FHSC 1L0HA 2MF4A 2K0YA 2MVUA 2X2BA 3GZLA 2L4BA 2LPKA 1KLPA 1L0IA 2AFDA 2N6ZA 4MRTC 2KGEA 2JGPA 2FQ0A 2K94A 2KOOA 2LOLA 2FVAA 1ACPA 4H2WC 2JU2A 1DNYA 2KORA 3NY7B 2MY5A 2GDXA 2MR8A 1NQ4A 2PNGA 3GZMA 3EJBA 5KP6B 2K92A 2M5RA 5EJDA 1F80D 3EJDA 2N6YA 1X3OA 2LIWA 4R0MA 4H2YC 2LKIA 3CE7A 2LL8A 2MR7A 2LIUA 1AF8A 2L9FA 2FVEA 2DNWA 2KGCA 4IZ6A 4BPFA 1DV5A 2CNRA 2L0QA 2K0XA 2CG5B 4NEOA 2KOPA 2GDYA 2XZ1C 2FAEA 2CQ8A 4DG9A 2N50A 2AF8A 2FQ1A 2N5IA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2QNW A;  2N5H A;  4H2X C;  2KG9 A;  2KR5 A;  4HKG A;  2MVV A;  5KP8 B;  1T8K A;  2AVA A;  2KOQ A;  2LML A;  2ROQ A;  2AFE A;  4PXH B;  2KG8 A;  2VSQ A;  2KG6 A;  2FQ2 A;  2KWL A;  2KGA A;  4BPG A;  2MD9 A;  3EJE A;  1VKU A;  3RG2 A;  5KP7 B;  2KGD A;  2K93 A;  2KW2 A;  2LTE A;  4CA3 A;  2JQ4 A;  2FAC A;  1HQB A;  4PWV B;  1OR5 A;  3LMO A;  5CZD B;  2K2Q A;  2FAD A;  2GDW A;  2EHS A;  2KOS A;  2L22 A;  2EHT A;  5HVC A;  4BPH A;  2JU1 A;  2XZ0 D;  2N98 A;  2FVF A;  1HY8 A;  2CGQ A;  5HV8 A;  2FHS C;  1L0H A;  2MF4 A;  2K0Y A;  2MVU A;  2X2B A;  3GZL A;  2L4B A;  2LPK A;  1KLP A;  1L0I A;  2AFD A;  2N6Z A;  4MRT C;  2KGE A;  2JGP A;  2FQ0 A;  2K94 A;  2KOO A;  2LOL A;  2FVA A;  1ACP A;  4H2W C;  2JU2 A;  1DNY A;  2KOR A;  3NY7 B;  2MY5 A;  2GDX A;  2MR8 A;  1NQ4 A;  2PNG A;  3GZM A;  3EJB A;  5KP6 B;  2K92 A;  2M5R A;  5EJD A;  1F80 D;  3EJD A;  2N6Y A;  1X3O A;  2LIW A;  4R0M A;  4H2Y C;  2LKI A;  3CE7 A;  2LL8 A;  2MR7 A;  2LIU A;  1AF8 A;  2L9F A;  2FVE A;  2DNW A;  2KGC A;  4IZ6 A;  4BPF A;  1DV5 A;  2CNR A;  2L0Q A;  2K0X A;  2CG5 B;  4NEO A;  2KOP A;  2GDY A;  2XZ1 C;  2FAE A;  2CQ8 A;  4DG9 A;  2N50 A;  2AF8 A;  2FQ1 A;  2N5I A; 
#chains in the Genus database with same CATH topology
 3DS2 A;  2QNW A;  2M8L A;  1YJ9 P;  2EFJ A;  1MZ8 A;  5KP8 B;  2AVA A;  2KOQ A;  2KG6 A;  2VLQ A;  4BPG A;  2OAR A;  3EJE A;  1VKU A;  3RG2 A;  5F2O A;  1QRJ A;  2KW2 A;  1E0H A;  3DS5 A;  2FAC A;  2EIA A;  2EHS A;  2KOS A;  2L22 A;  3CCS P;  3E2D A;  1K9M Q;  1VQ9 P;  4WYM A;  5HGN A;  2FVF A;  3P05 A;  2EG5 A;  2XV6 A;  3CXC O;  3B5I A;  2GZJ A;  2MF4 A;  1IMP A;  3GZL A;  1Q7Y Q;  1RO0 A;  2L4B A;  2PEN A;  2AFD A;  1E6J P;  1VQ6 P;  2KGE A;  2E1M A;  3DS3 A;  4QKO A;  1YI2 P;  2FQ0 A;  1AUM A;  3WBH A;  1AYI A;  2LOL A;  2JYG A;  4H2W C;  2GZF A;  2JO0 A;  1YIT P;  4GR2 A;  1NQ4 A;  2PEO A;  2K0D X;  3EJB A;  2K92 A;  2PEK A;  1VQO P;  4QNB A;  3CME P;  3G21 A;  1F80 D;  2WPT A;  3CC7 P;  3CCM P;  2LIW A;  1Q82 Q;  3CMA P;  3CE7 A;  2FVE A;  3DS0 A;  2BUO A;  3CC4 P;  2L0Q A;  2PEI A;  4NEO A;  1M90 Q;  2GZI A;  3I56 P;  1VQN P;  3Q20 A;  2ROQ A;  1VQM P;  5HGL A;  4H2X C;  2KG9 A;  1YIJ P;  4HKG A;  1EIA A;  2LML A;  2AFE A;  5BS1 A;  2NO8 A;  1M6N A;  2FQ2 A;  4UHP B;  2KGA A;  3LRY A;  2MD9 A;  3NTE A;  1A43 A;  5KP7 B;  5F2N A;  2K93 A;  2LTE A;  4CA3 A;  2QA4 P;  1HQB A;  1VHN A;  1OR5 A;  4XRQ A;  2GDW A;  2EHT A;  2CWO A;  2JU1 A;  2XZ0 D;  2JBG A;  1HY8 A;  1Q86 Q;  2FHS C;  3CCQ P;  2Z45 A;  3G1G A;  2K0Y A;  2GZE A;  2JYL A;  2MVU A;  4COP A;  2GYK A;  1BAJ A;  1L0I A;  3CC2 P;  2N6Z A;  3HYB A;  1IUQ A;  2OTL P;  1Z6M A;  2JU2 A;  2KOR A;  1EOQ A;  2MR8 A;  2M8N A;  2L6E A;  5EJD A;  2P9X A;  1KC8 Q;  2N6Y A;  1X3O A;  1S72 P;  4XFZ A;  4R0M A;  3CCJ P;  1NJI Q;  3H4E A;  2MR7 A;  3CCL P;  1AF8 A;  1RNI A;  3M1M A;  2L9F A;  1DV5 A;  4U0C A;  2K0X A;  2CQ8 A;  4DG9 A;  4COC A;  2N50 A;  2PEJ A;  3G0V A;  1KLP A;  1KQS O;  3OW2 O;  2ONT A;  2KR5 A;  3H47 A;  3HZQ A;  2MVV A;  2PEQ A;  1K8A Q;  4PXH B;  1FR2 A;  2KG8 A;  2VSQ A;  1EMV A;  3RG6 C;  4U0D A;  1Q81 Q;  2KGD A;  2Z46 A;  3CCE P;  4PWV B;  7CEI A;  2KOD A;  2DGY A;  2K2Q A;  3CCR P;  2PEM A;  2LF4 A;  2Z44 A;  4BPH A;  2K5X A;  3G26 A;  2N98 A;  2CGQ A;  5HV8 A;  3MGE A;  1M74 A;  5HGM A;  3GJN A;  2X2B A;  1UNK A;  3B4Q A;  2LPK A;  2XXM A;  2ERH A;  5DCK A;  2OTJ P;  4U0E A;  2KOO A;  1RO2 A;  1VQ5 P;  1DNY A;  3I55 P;  2GDX A;  2PNG A;  4GR6 A;  2JAZ A;  2XT1 A;  4XFY A;  1W2B O;  4H2Y C;  1UJZ A;  3DTJ A;  1A8O A;  1QVF O;  2DNW A;  1K73 Q;  2VLP A;  3U43 A;  1VQP P;  2VLO A;  2BHV A;  2AF8 A;  2GZG A;  2FQ1 A;  3GKL C;  3G6E P;  1VQ8 P;  2N5H A;  4PH1 A;  5EW5 E;  5F2K A;  1T8K A;  3G29 A;  2JB0 A;  3DS4 A;  4U0B A;  4XFX A;  4F37 A;  2KWL A;  1GXG A;  3H0D A;  2M8P A;  3DS1 A;  4U0A A;  1N8R Q;  1VQK P;  2JQ4 A;  3LMO A;  5CZD B;  3CD6 P;  3CPW O;  2FAD A;  5HVC A;  2PY8 A;  1GXH A;  1D1D A;  1ZMB A;  1VQL P;  2VLN A;  3G4S P;  1IMQ A;  4IPY A;  1L0H A;  1YJW P;  4XRO A;  3CCV P;  4PH0 A;  3G1I A;  4MRT C;  1YJN P;  1CEI A;  2JGP A;  4U0F A;  1GPJ A;  2K94 A;  1VQ7 P;  2FVA A;  1VQ4 P;  1ACP A;  3VRL C;  1YHQ P;  3NY7 B;  1BXI A;  2MY5 A;  1QVG O;  4M0I A;  3GZM A;  5KP6 B;  2M5R A;  3G28 A;  3CCU P;  3EJD A;  5I4T G;  1JJ2 O;  2LKI A;  2LL8 A;  2LIU A;  1M6E X;  2KGC A;  3G71 P;  1ZNV A;  4IZ6 A;  1M1K Q;  4BPF A;  2CNR A;  3DPH A;  5JPA A;  2QEX P;  1KD1 Q;  1K30 A;  2CG5 B;  2KOP A;  2GDY A;  2XZ1 C;  5HGO A;  2FAE A;  5BS2 A;  2N5I A; 
#chains in the Genus database with same CATH homology
 2QNW A;  2N5H A;  4H2X C;  2KG9 A;  2KR5 A;  4HKG A;  2MVV A;  5KP8 B;  1T8K A;  2AVA A;  2KOQ A;  2LML A;  2ROQ A;  2AFE A;  4PXH B;  2KG8 A;  2VSQ A;  2KG6 A;  2FQ2 A;  2KWL A;  2KGA A;  4BPG A;  2MD9 A;  3EJE A;  1VKU A;  3RG2 A;  5KP7 B;  2KGD A;  2K93 A;  2KW2 A;  2LTE A;  4CA3 A;  2JQ4 A;  2FAC A;  1HQB A;  4PWV B;  1OR5 A;  3LMO A;  5CZD B;  2K2Q A;  2FAD A;  2GDW A;  2EHS A;  2KOS A;  2L22 A;  2EHT A;  5HVC A;  4BPH A;  2JU1 A;  2XZ0 D;  2N98 A;  2FVF A;  1HY8 A;  2CGQ A;  5HV8 A;  2FHS C;  1L0H A;  2MF4 A;  2K0Y A;  2MVU A;  2X2B A;  3GZL A;  2L4B A;  2LPK A;  1KLP A;  1L0I A;  2AFD A;  2N6Z A;  4MRT C;  2KGE A;  2JGP A;  2FQ0 A;  2K94 A;  2KOO A;  2LOL A;  2FVA A;  1ACP A;  4H2W C;  2JU2 A;  1DNY A;  2KOR A;  3NY7 B;  2MY5 A;  2GDX A;  2MR8 A;  1NQ4 A;  2PNG A;  3GZM A;  3EJB A;  5KP6 B;  2K92 A;  2M5R A;  5EJD A;  1F80 D;  3EJD A;  2N6Y A;  1X3O A;  2LIW A;  4R0M A;  4H2Y C;  2LKI A;  3CE7 A;  2LL8 A;  2MR7 A;  2LIU A;  1AF8 A;  2L9F A;  2FVE A;  2DNW A;  2KGC A;  4IZ6 A;  4BPF A;  1DV5 A;  2CNR A;  2L0Q A;  2K0X A;  2CG5 B;  4NEO A;  2KOP A;  2GDY A;  2XZ1 C;  2FAE A;  2CQ8 A;  4DG9 A;  2N50 A;  2AF8 A;  2FQ1 A;  2N5I A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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