2AF8A

Actinorhodin polyketide synthase acyl carrier protein from streptomyces coelicolor a3(2), nmr, minimized average structure
Total Genus 15
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
15
sequence length
86
structure length
86
Chain Sequence
MATLLTTDDLRRALVECAGETDGTDLSGDFLDLRFEDIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLINGALAEAA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Antibiotic biosynthesis
molecule keywords ACTINORHODIN POLYKETIDE SYNTHASE ACYL CARRIER PROTEIN
publication title Solution structure of the actinorhodin polyketide synthase acyl carrier protein from Streptomyces coelicolor A3(2).
pubmed doi rcsb
source organism Streptomyces coelicolor
total genus 15
structure length 86
sequence length 86
ec nomenclature
pdb deposition date 1997-03-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2af8A00
1F80D 2FQ0A 4HKGA 3EJDA 1X3OA 1VKUA 2MF4A 2N6ZA 3NY7B 2L22A 2FVEA 2MVVA 2XZ0D 1L0HA 4CA3A 2LIUA 1KLPA 4H2YC 2K94A 3GZMA 2ROQA 2GDWA 2FADA 2KGAA 2KGDA 2N6YA 2AFEA 4DG9A 2AFDA 1DNYA 2CG5B 2MR7A 2KORA 4PWVB 2MVUA 2K93A 2KOQA 2KGCA 2FVFA 1OR5A 2MY5A 2FQ1A 5EJDA 1ACPA 2FHSC 2N98A 1AF8A 2K92A 3LMOA 5KP7B 2LMLA 2MD9A 2LKIA 4H2XC 2L9FA 2M5RA 2CGQA 2PNGA 2JU2A 2GDXA 2KOOA 2XZ1C 1DV5A 2JU1A 2KW2A 2EHTA 2DNWA 2CQ8A 2FQ2A 4PXHB 2KG8A 2N50A 2AVAA 4H2WC 1HY8A 2CNRA 2GDYA 4MRTC 2KGEA 3EJEA 1HQBA 5CZDB 4IZ6A 2KOSA 4BPFA 2X2BA 4BPGA 2MR8A 2K2QA 3GZLA 2LIWA 2EHSA 4R0MA 4BPHA 2L0QA 3RG2A 2K0XA 2KG9A 2K0YA 5KP6B 2FAEA 2LOLA 2N5HA 2LTEA 2KG6A 2LPKA 2FACA 2KR5A 2L4BA 1NQ4A 2AF8A 2FVAA 3CE7A 1T8KA 1L0IA 2QNWA 2N5IA 5HV8A 2JQ4A 5HVCA 5KP8B 2VSQA 4NEOA 2LL8A 2JGPA 3EJBA 2KOPA 2KWLA
chains in the Genus database with same CATH superfamily
3CCQP 1YJNP 3EJDA 1X3OA 1M1KQ 2P9XA 1VQMP 2K0DX 4XFYA 3NTEA 1L0HA 4CA3A 5F2NA 3CCRP 5I4TG 1ZNVA 1RNIA 5DCKA 3I55P 3E2DA 2GZIA 1BAJA 2PEOA 2PEIA 2PEQA 2CG5B 1A43A 3H0DA 3G4SP 2M8LA 5EW5E 2VLPA 3G0VA 2XV6A 1YJWP 4GR2A 2EIAA 2FHSC 2NO8A 4PH0A 1VQPP 2LMLA 2K5XA 4H2XC 1RO0A 5BS2A 2M8NA 2EHTA 2DNWA 4PXHB 2KG8A 1VHNA 4XFXA 1HY8A 2ERHA 3EJEA 1W2BO 4BPGA 2MR8A 1N8RQ 3GZLA 2LIWA 2EHSA 4R0MA 2K0XA 1M90Q 2N5HA 4U0FA 3DS5A 2JO0A 3DPHA 3G28A 1E6JP 2LTEA 2AF8A 5HVCA 2VSQA 1AYIA 3H47A 5F2KA 3EJBA 2KOPA 2VLQA 1IMQA 4XFZA 1Z6MA 2PENA 4HKGA 2MF4A 1ZMBA 1K30A 2JB0A 3NY7B 2FVEA 5HGMA 2MVVA 2XZ0D 1KLPA 7CEIA 2QEXP 3VRLC 3GZMA 2ROQA 1A8OA 3WBHA 4DG9A 1QVGO 2XXMA 2AFDA 4GR6A 1QRJA 4XRQA 3OW2O 2CWOA 4PWVB 1YITP 2KOQA 3CC2P 4QKOA 1VQLP 2MY5A 3CXCO 1ACPA 2N98A 3DTJA 1GXGA 2MD9A 2PNGA 1Q81Q 3H4EA 2GDXA 4UHPB 3G6EP 1S72P 2JU1A 2KW2A 3DS3A 2FQ2A 1YHQP 2N50A 1YJ9P 4MRTC 1HQBA 5CZDB 1MZ8A 2KOSA 1VQ5P 1VQOP 5JPAA 1UJZA 2KG9A 1D1DA 5BS1A 2KG6A 3GKLC 2EFJA 1T8KA 3CMEP 1L0IA 3CCLP 2QNWA 2DGYA 4U0EA 1VQ8P 2OARA 2KWLA 2PEMA 1YIJP 2OTLP 2JYLA 2L22A 3G29A 3CCEP 1JJ2O 4IPYA 1GXHA 2BUOA 3Q20A 1K73Q 2VLNA 4H2YC 5F2OA 2K94A 1RO2A 1VQ9P 2N6YA 2AFEA 3CCUP 4WYMA 1DNYA 1E0HA 1IMPA 2EG5A 2Z45A 2MVUA 2K93A 2FVFA 3G1IA 3CCMP 2GZFA 1VQ7P 2FQ1A 2Z44A 5EJDA 1M6EX 2QA4P 2K92A 3RG6C 3LMOA 3DS2A 2L9FA 1KD1Q 2ONTA 2M5RA 3DS1A 2CGQA 4U0AA 2JU2A 4M0IA 3M1MA 2XZ1C 1DV5A 2GZEA 1M74A 2CQ8A 3CMAP 2CNRA 5HGOA 1KQSO 2KGEA 3P05A 3B4QA 4IZ6A 4BPFA 2VLOA 1KC8Q 4BPHA 2JAZA 2GZGA 2K0YA 2JBGA 2GZJA 4XROA 2LPKA 2FACA 2L6EA 2Z46A 2FVAA 3CE7A 1VQKP 4F37A 2N5IA 2JQ4A 4PH1A 3DS0A 3G71P 2LL8A 2JGPA 5HGNA 1EOQA 1F80D 2FQ0A 3CPWO 1EMVA 2OTJP 3B5IA 1VKUA 2KODA 2N6ZA 4U0DA 3I56P 1GPJA 2LIUA 1K8AQ 4QNBA 1IUQA 1AUMA 3GJNA 2E1MA 2LF4A 2GDWA 2FADA 2KGAA 1EIAA 2WPTA 2KGDA 1VQ6P 1K9MQ 1NJIQ 2MR7A 1CEIA 2KORA 4U0BA 3G1GA 3CCVP 2KGCA 2M8PA 3CD6P 1OR5A 1UNKA 4U0CA 3G26A 3HZQA 5KP7B 2LKIA 3HYBA 4COCA 1YI2P 3MGEA 2KOOA 5HGLA 1Q7YQ 2PEKA 1VQ4P 1Q86Q 2JYGA 2AVAA 2BHVA 4H2WC 2GDYA 3LRYA 2X2BA 2K2QA 2L0QA 4COPA 3CCSP 3RG2A 2XT1A 3DS4A 1QVFO 3CC4P 5KP6B 2FAEA 1VQNP 2LOLA 3G21A 2PEJA 1BXIA 3CC7P 2KR5A 1M6NA 2L4BA 1NQ4A 1FR2A 3CCJP 1Q82Q 2PY8A 2GYKA 5HV8A 5KP8B 4NEOA 3U43A 1AF8A
chains in the Genus database with same CATH topology
1F80D 2FQ0A 4HKGA 3EJDA 1X3OA 1VKUA 2MF4A 2N6ZA 3NY7B 2L22A 2FVEA 2MVVA 2XZ0D 1L0HA 4CA3A 2LIUA 1KLPA 4H2YC 2K94A 3GZMA 2ROQA 2GDWA 2FADA 2KGAA 2KGDA 2N6YA 2AFEA 4DG9A 2AFDA 1DNYA 2CG5B 2MR7A 2KORA 4PWVB 2MVUA 2K93A 2KOQA 2KGCA 2FVFA 1OR5A 2MY5A 2FQ1A 5EJDA 1ACPA 2FHSC 2N98A 1AF8A 2K92A 3LMOA 5KP7B 2LMLA 2MD9A 2LKIA 4H2XC 2L9FA 2M5RA 2CGQA 2PNGA 2JU2A 2GDXA 2KOOA 2XZ1C 1DV5A 2JU1A 2KW2A 2EHTA 2DNWA 2CQ8A 2FQ2A 4PXHB 2KG8A 2N50A 2AVAA 4H2WC 1HY8A 2CNRA 2GDYA 4MRTC 2KGEA 3EJEA 1HQBA 5CZDB 4IZ6A 2KOSA 4BPFA 2X2BA 4BPGA 2MR8A 2K2QA 3GZLA 2LIWA 2EHSA 4R0MA 4BPHA 2L0QA 3RG2A 2K0XA 2KG9A 2K0YA 5KP6B 2FAEA 2LOLA 2N5HA 2LTEA 2KG6A 2LPKA 2FACA 2KR5A 2L4BA 1NQ4A 2AF8A 2FVAA 3CE7A 1T8KA 1L0IA 2QNWA 2N5IA 5HV8A 2JQ4A 5HVCA 5KP8B 2VSQA 4NEOA 2LL8A 2JGPA 3EJBA 2KOPA 2KWLA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1F80 D;  2FQ0 A;  4HKG A;  3EJD A;  1X3O A;  1VKU A;  2MF4 A;  2N6Z A;  3NY7 B;  2L22 A;  2FVE A;  2MVV A;  2XZ0 D;  1L0H A;  4CA3 A;  2LIU A;  1KLP A;  4H2Y C;  2K94 A;  3GZM A;  2ROQ A;  2GDW A;  2FAD A;  2KGA A;  2KGD A;  2N6Y A;  2AFE A;  4DG9 A;  2AFD A;  1DNY A;  2CG5 B;  2MR7 A;  2KOR A;  4PWV B;  2MVU A;  2K93 A;  2KOQ A;  2KGC A;  2FVF A;  1OR5 A;  2MY5 A;  2FQ1 A;  5EJD A;  1ACP A;  2FHS C;  2N98 A;  1AF8 A;  2K92 A;  3LMO A;  5KP7 B;  2LML A;  2MD9 A;  2LKI A;  4H2X C;  2L9F A;  2M5R A;  2CGQ A;  2PNG A;  2JU2 A;  2GDX A;  2KOO A;  2XZ1 C;  1DV5 A;  2JU1 A;  2KW2 A;  2EHT A;  2DNW A;  2CQ8 A;  2FQ2 A;  4PXH B;  2KG8 A;  2N50 A;  2AVA A;  4H2W C;  1HY8 A;  2CNR A;  2GDY A;  4MRT C;  2KGE A;  3EJE A;  1HQB A;  5CZD B;  4IZ6 A;  2KOS A;  4BPF A;  2X2B A;  4BPG A;  2MR8 A;  2K2Q A;  3GZL A;  2LIW A;  2EHS A;  4R0M A;  4BPH A;  2L0Q A;  3RG2 A;  2K0X A;  2KG9 A;  2K0Y A;  5KP6 B;  2FAE A;  2LOL A;  2N5H A;  2LTE A;  2KG6 A;  2LPK A;  2FAC A;  2KR5 A;  2L4B A;  1NQ4 A;  2AF8 A;  2FVA A;  3CE7 A;  1T8K A;  1L0I A;  2QNW A;  2N5I A;  5HV8 A;  2JQ4 A;  5HVC A;  5KP8 B;  2VSQ A;  4NEO A;  2LL8 A;  2JGP A;  3EJB A;  2KOP A;  2KWL A; 
#chains in the Genus database with same CATH topology
 3CCQ P;  1YJN P;  3EJD A;  1X3O A;  1M1K Q;  2P9X A;  1VQM P;  2K0D X;  4XFY A;  3NTE A;  1L0H A;  4CA3 A;  5F2N A;  3CCR P;  5I4T G;  1ZNV A;  1RNI A;  5DCK A;  3I55 P;  3E2D A;  2GZI A;  1BAJ A;  2PEO A;  2PEI A;  2PEQ A;  2CG5 B;  1A43 A;  3H0D A;  3G4S P;  2M8L A;  5EW5 E;  2VLP A;  3G0V A;  2XV6 A;  1YJW P;  4GR2 A;  2EIA A;  2FHS C;  2NO8 A;  4PH0 A;  1VQP P;  2LML A;  2K5X A;  4H2X C;  1RO0 A;  5BS2 A;  2M8N A;  2EHT A;  2DNW A;  4PXH B;  2KG8 A;  1VHN A;  4XFX A;  1HY8 A;  2ERH A;  3EJE A;  1W2B O;  4BPG A;  2MR8 A;  1N8R Q;  3GZL A;  2LIW A;  2EHS A;  4R0M A;  2K0X A;  1M90 Q;  2N5H A;  4U0F A;  3DS5 A;  2JO0 A;  3DPH A;  3G28 A;  1E6J P;  2LTE A;  2AF8 A;  5HVC A;  2VSQ A;  1AYI A;  3H47 A;  5F2K A;  3EJB A;  2KOP A;  2VLQ A;  1IMQ A;  4XFZ A;  1Z6M A;  2PEN A;  4HKG A;  2MF4 A;  1ZMB A;  1K30 A;  2JB0 A;  3NY7 B;  2FVE A;  5HGM A;  2MVV A;  2XZ0 D;  1KLP A;  7CEI A;  2QEX P;  3VRL C;  3GZM A;  2ROQ A;  1A8O A;  3WBH A;  4DG9 A;  1QVG O;  2XXM A;  2AFD A;  4GR6 A;  1QRJ A;  4XRQ A;  3OW2 O;  2CWO A;  4PWV B;  1YIT P;  2KOQ A;  3CC2 P;  4QKO A;  1VQL P;  2MY5 A;  3CXC O;  1ACP A;  2N98 A;  3DTJ A;  1GXG A;  2MD9 A;  2PNG A;  1Q81 Q;  3H4E A;  2GDX A;  4UHP B;  3G6E P;  1S72 P;  2JU1 A;  2KW2 A;  3DS3 A;  2FQ2 A;  1YHQ P;  2N50 A;  1YJ9 P;  4MRT C;  1HQB A;  5CZD B;  1MZ8 A;  2KOS A;  1VQ5 P;  1VQO P;  5JPA A;  1UJZ A;  2KG9 A;  1D1D A;  5BS1 A;  2KG6 A;  3GKL C;  2EFJ A;  1T8K A;  3CME P;  1L0I A;  3CCL P;  2QNW A;  2DGY A;  4U0E A;  1VQ8 P;  2OAR A;  2KWL A;  2PEM A;  1YIJ P;  2OTL P;  2JYL A;  2L22 A;  3G29 A;  3CCE P;  1JJ2 O;  4IPY A;  1GXH A;  2BUO A;  3Q20 A;  1K73 Q;  2VLN A;  4H2Y C;  5F2O A;  2K94 A;  1RO2 A;  1VQ9 P;  2N6Y A;  2AFE A;  3CCU P;  4WYM A;  1DNY A;  1E0H A;  1IMP A;  2EG5 A;  2Z45 A;  2MVU A;  2K93 A;  2FVF A;  3G1I A;  3CCM P;  2GZF A;  1VQ7 P;  2FQ1 A;  2Z44 A;  5EJD A;  1M6E X;  2QA4 P;  2K92 A;  3RG6 C;  3LMO A;  3DS2 A;  2L9F A;  1KD1 Q;  2ONT A;  2M5R A;  3DS1 A;  2CGQ A;  4U0A A;  2JU2 A;  4M0I A;  3M1M A;  2XZ1 C;  1DV5 A;  2GZE A;  1M74 A;  2CQ8 A;  3CMA P;  2CNR A;  5HGO A;  1KQS O;  2KGE A;  3P05 A;  3B4Q A;  4IZ6 A;  4BPF A;  2VLO A;  1KC8 Q;  4BPH A;  2JAZ A;  2GZG A;  2K0Y A;  2JBG A;  2GZJ A;  4XRO A;  2LPK A;  2FAC A;  2L6E A;  2Z46 A;  2FVA A;  3CE7 A;  1VQK P;  4F37 A;  2N5I A;  2JQ4 A;  4PH1 A;  3DS0 A;  3G71 P;  2LL8 A;  2JGP A;  5HGN A;  1EOQ A;  1F80 D;  2FQ0 A;  3CPW O;  1EMV A;  2OTJ P;  3B5I A;  1VKU A;  2KOD A;  2N6Z A;  4U0D A;  3I56 P;  1GPJ A;  2LIU A;  1K8A Q;  4QNB A;  1IUQ A;  1AUM A;  3GJN A;  2E1M A;  2LF4 A;  2GDW A;  2FAD A;  2KGA A;  1EIA A;  2WPT A;  2KGD A;  1VQ6 P;  1K9M Q;  1NJI Q;  2MR7 A;  1CEI A;  2KOR A;  4U0B A;  3G1G A;  3CCV P;  2KGC A;  2M8P A;  3CD6 P;  1OR5 A;  1UNK A;  4U0C A;  3G26 A;  3HZQ A;  5KP7 B;  2LKI A;  3HYB A;  4COC A;  1YI2 P;  3MGE A;  2KOO A;  5HGL A;  1Q7Y Q;  2PEK A;  1VQ4 P;  1Q86 Q;  2JYG A;  2AVA A;  2BHV A;  4H2W C;  2GDY A;  3LRY A;  2X2B A;  2K2Q A;  2L0Q A;  4COP A;  3CCS P;  3RG2 A;  2XT1 A;  3DS4 A;  1QVF O;  3CC4 P;  5KP6 B;  2FAE A;  1VQN P;  2LOL A;  3G21 A;  2PEJ A;  1BXI A;  3CC7 P;  2KR5 A;  1M6N A;  2L4B A;  1NQ4 A;  1FR2 A;  3CCJ P;  1Q82 Q;  2PY8 A;  2GYK A;  5HV8 A;  5KP8 B;  4NEO A;  3U43 A;  1AF8 A; 
#chains in the Genus database with same CATH homology
 1F80 D;  2FQ0 A;  4HKG A;  3EJD A;  1X3O A;  1VKU A;  2MF4 A;  2N6Z A;  3NY7 B;  2L22 A;  2FVE A;  2MVV A;  2XZ0 D;  1L0H A;  4CA3 A;  2LIU A;  1KLP A;  4H2Y C;  2K94 A;  3GZM A;  2ROQ A;  2GDW A;  2FAD A;  2KGA A;  2KGD A;  2N6Y A;  2AFE A;  4DG9 A;  2AFD A;  1DNY A;  2CG5 B;  2MR7 A;  2KOR A;  4PWV B;  2MVU A;  2K93 A;  2KOQ A;  2KGC A;  2FVF A;  1OR5 A;  2MY5 A;  2FQ1 A;  5EJD A;  1ACP A;  2FHS C;  2N98 A;  1AF8 A;  2K92 A;  3LMO A;  5KP7 B;  2LML A;  2MD9 A;  2LKI A;  4H2X C;  2L9F A;  2M5R A;  2CGQ A;  2PNG A;  2JU2 A;  2GDX A;  2KOO A;  2XZ1 C;  1DV5 A;  2JU1 A;  2KW2 A;  2EHT A;  2DNW A;  2CQ8 A;  2FQ2 A;  4PXH B;  2KG8 A;  2N50 A;  2AVA A;  4H2W C;  1HY8 A;  2CNR A;  2GDY A;  4MRT C;  2KGE A;  3EJE A;  1HQB A;  5CZD B;  4IZ6 A;  2KOS A;  4BPF A;  2X2B A;  4BPG A;  2MR8 A;  2K2Q A;  3GZL A;  2LIW A;  2EHS A;  4R0M A;  4BPH A;  2L0Q A;  3RG2 A;  2K0X A;  2KG9 A;  2K0Y A;  5KP6 B;  2FAE A;  2LOL A;  2N5H A;  2LTE A;  2KG6 A;  2LPK A;  2FAC A;  2KR5 A;  2L4B A;  1NQ4 A;  2AF8 A;  2FVA A;  3CE7 A;  1T8K A;  1L0I A;  2QNW A;  2N5I A;  5HV8 A;  2JQ4 A;  5HVC A;  5KP8 B;  2VSQ A;  4NEO A;  2LL8 A;  2JGP A;  3EJB A;  2KOP A;  2KWL A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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