2AF8A

Actinorhodin polyketide synthase acyl carrier protein from streptomyces coelicolor a3(2), nmr, minimized average structure
Total Genus 15
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
15
sequence length
86
structure length
86
Chain Sequence
MATLLTTDDLRRALVECAGETDGTDLSGDFLDLRFEDIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLINGALAEAA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Antibiotic biosynthesis
molecule keywords ACTINORHODIN POLYKETIDE SYNTHASE ACYL CARRIER PROTEIN
publication title Solution structure of the actinorhodin polyketide synthase acyl carrier protein from Streptomyces coelicolor A3(2).
pubmed doi rcsb
source organism Streptomyces coelicolor
total genus 15
structure length 86
sequence length 86
ec nomenclature
pdb deposition date 1997-03-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2af8A00
2JU1A 2N5IA 4BPFA 2CQ8A 2KG9A 3GZMA 2EHTA 2KW2A 2N5HA 2FQ2A 2GDXA 2KORA 2KOOA 2CGQA 2FAEA 3EJBA 4BPHA 2JU2A 2K0YA 1DNYA 2FVFA 2FQ1A 2LIUA 4H2WC 2MR8A 2MVUA 3CE7A 4H2XC 4PWVB 1OR5A 2EHSA 2LMLA 2AFDA 2FHSC 2KGEA 2KGAA 2KOPA 2QNWA 5HV8A 2LTEA 4BPGA 1HY8A 2K0XA 2LIWA 2K2QA 2MY5A 4H2YC 2FVAA 2KOSA 2AF8A 2GDWA 5KP6B 4R0MA 2JQ4A 2N6YA 3NY7B 1T8KA 4DG9A 2L0QA 2N50A 2L22A 1F80D 2MD9A 1ACPA 2AFEA 3LMOA 1L0IA 2CG5B 2DNWA 2PNGA 4MRTC 2LPKA 3EJEA 2MF4A 3GZLA 2FVEA 4PXHB 2XZ1C 4NEOA 2FADA 2FQ0A 1VKUA 2KGCA 2JGPA 2K92A 2KR5A 2LOLA 2L9FA 4HKGA 2MVVA 2KG6A 1DV5A 2KG8A 2M5RA 2FACA 2VSQA 2KOQA 2L4BA 1AF8A 5KP8B 2LKIA 1X3OA 2N6ZA 2XZ0D 1NQ4A 1L0HA 2K94A 2CNRA 2K93A 2MR7A 5HVCA 3RG2A 4IZ6A 5KP7B 4CA3A 2X2BA 2ROQA 3EJDA 2N98A 2KWLA 2AVAA 1HQBA 1KLPA 2GDYA 5CZDB 2LL8A 5EJDA 2KGDA
chains in the Genus database with same CATH superfamily
2N5IA 1VQNP 2KW2A 3DS1A 5HGMA 2KODA 2CGQA 1S72P 4UHPB 2BHVA 2FVFA 1QRJA 2XV6A 4H2WC 2L6EA 3DS0A 1OR5A 2EHSA 2LMLA 1ZNVA 1M90Q 3WBHA 5HV8A 2PY8A 4BPGA 2KOSA 1YHQP 2JQ4A 4IPYA 3NY7B 1VQ6P 1VQOP 1IMPA 5DCKA 1BXIA 2L22A 2QEXP 4U0EA 3CPWO 2CG5B 5BS1A 4XFYA 3G6EP 3EJEA 4M0IA 3GZLA 4U0BA 1E0HA 2GZIA 1GXGA 2XZ1C 2PEOA 3G1GA 2FADA 1M74A 2L9FA 4HKGA 2MVVA 1DV5A 2KG8A 1EOQA 2M5RA 1QVGO 1AYIA 3CXCO 2CWOA 2L4BA 1AF8A 2LKIA 1K30A 3G28A 2VLPA 2XZ0D 1M1KQ 3B5IA 2CNRA 5HVCA 4IZ6A 3RG6C 4CA3A 2X2BA 1EIAA 4WYMA 2NO8A 2KWLA 4XFXA 2GDYA 5CZDB 4PH0A 5EJDA 3CCMP 2VLOA 2JU1A 3DPHA 3VRLC 1K73Q 2EHTA 2QA4P 2N5HA 2OARA 3EJBA 3NTEA 1Q86Q 1AUMA 4COCA 2FQ1A 2ONTA 2MVUA 4PWVB 3DS3A 4PH1A 2FHSC 5BS2A 2PEIA 1YIJP 2E1MA 4H2YC 2FVAA 1YITP 4U0FA 5HGOA 4R0MA 2DGYA 3HYBA 5I4TG 2N6YA 4XRQA 1IMQA 1RO0A 3DS2A 3CC4P 2MD9A 1QVFO 2Z46A 4U0DA 1ACPA 2AFEA 2XT1A 1VQ5P 2WPTA 1CEIA 5HGNA 2PNGA 3CCSP 2LPKA 2K0DX 2EFJA 2MF4A 2XXMA 3HZQA 1VQKP 3G71P 2FVEA 1E6JP 3CMAP 4NEOA 3OW2O 4COPA 1YJWP 3U43A 2PEMA 1VQ7P 2OTLP 1VQMP 2ERHA 2FACA 1Q81Q 5KP8B 2M8LA 3CCJP 2N6ZA 1NQ4A 1L0HA 1EMVA 3LRYA 2MR7A 2PEQA 3RG2A 1A8OA 5F2OA 1RNIA 3H4EA 1MZ8A 1KD1Q 1YJNP 1M6EX 2AVAA 1KLPA 2LL8A 3G0VA 1IUQA 2CQ8A 2KG9A 5F2NA 3GZMA 2GDXA 2KORA 4BPHA 2JU2A 3DTJA 3G29A 2MR8A 3CE7A 3I55P 3CD6P 4XFZA 2LTEA 1GPJA 2K2QA 1VQLP 1RO2A 4QNBA 1VQPP 2MY5A 2AF8A 3CCQP 3DS4A 3CCVP 3DS5A 1A43A 1ZMBA 1VQ9P 2Z44A 1KQSO 1UNKA 2L0QA 2LF4A 2N50A 1F80D 3CCUP 3LMOA 1L0IA 2EIAA 5JPAA 2DNWA 4MRTC 3G4SP 1KC8Q 2GZJA 3CC7P 4QKOA 1YJ9P 4PXHB 2JAZA 2FQ0A 2JGPA 2K92A 2KR5A 1UJZA 1VQ8P 2VLQA 2OTJP 5EW5E 1BAJA 2K94A 1M6NA 3CCRP 2K93A 1FR2A 5KP7B 2ROQA 3EJDA 1Q82Q 2N98A 2K5XA 3I56P 3CCLP 2VLNA 1HQBA 3M1MA 2GZGA 4BPFA 2PEKA 2FQ2A 1VHNA 2KOOA 2FAEA 2PENA 2Z45A 3G1IA 1Z6MA 2K0YA 1DNYA 2LIUA 4H2XC 5F2KA 3CC2P 2P9XA 1NJIQ 2AFDA 2KGEA 2JYGA 2KGAA 2KOPA 2QNWA 4GR6A 1W2BO 1JJ2O 1HY8A 2K0XA 3CMEP 2LIWA 2JYLA 1YI2P 4U0AA 3B4QA 2M8NA 2EG5A 2GDWA 5KP6B 2JBGA 3G21A 1T8KA 4DG9A 4XROA 3MGEA 1D1DA 2GZFA 4U0CA 3Q20A 1K8AQ 3G26A 4GR2A 2GYKA 2GZEA 4F37A 1VQ4P 1VKUA 2KGCA 1Q7YQ 2JO0A 2LOLA 3GKLC 2JB0A 3H0DA 2KG6A 1K9MQ 2VSQA 7CEIA 2BUOA 2KOQA 3H47A 1X3OA 1N8RQ 3CCEP 2PEJA 3E2DA 1GXHA 5HGLA 2M8PA 3P05A 3GJNA 2KGDA
chains in the Genus database with same CATH topology
2JU1A 2N5IA 4BPFA 2CQ8A 2KG9A 3GZMA 2EHTA 2KW2A 2N5HA 2FQ2A 2GDXA 2KORA 2KOOA 2CGQA 2FAEA 3EJBA 4BPHA 2JU2A 2K0YA 1DNYA 2FVFA 2FQ1A 2LIUA 4H2WC 2MR8A 2MVUA 3CE7A 4H2XC 4PWVB 1OR5A 2EHSA 2LMLA 2AFDA 2FHSC 2KGEA 2KGAA 2KOPA 2QNWA 5HV8A 2LTEA 4BPGA 1HY8A 2K0XA 2LIWA 2K2QA 2MY5A 4H2YC 2FVAA 2KOSA 2AF8A 2GDWA 5KP6B 4R0MA 2JQ4A 2N6YA 3NY7B 1T8KA 4DG9A 2L0QA 2N50A 2L22A 1F80D 2MD9A 1ACPA 2AFEA 3LMOA 1L0IA 2CG5B 2DNWA 2PNGA 4MRTC 2LPKA 3EJEA 2MF4A 3GZLA 2FVEA 4PXHB 2XZ1C 4NEOA 2FADA 2FQ0A 1VKUA 2KGCA 2JGPA 2K92A 2KR5A 2LOLA 2L9FA 4HKGA 2MVVA 2KG6A 1DV5A 2KG8A 2M5RA 2FACA 2VSQA 2KOQA 2L4BA 1AF8A 5KP8B 2LKIA 1X3OA 2N6ZA 2XZ0D 1NQ4A 1L0HA 2K94A 2CNRA 2K93A 2MR7A 5HVCA 3RG2A 4IZ6A 5KP7B 4CA3A 2X2BA 2ROQA 3EJDA 2N98A 2KWLA 2AVAA 1HQBA 1KLPA 2GDYA 5CZDB 2LL8A 5EJDA 2KGDA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2JU1 A;  2N5I A;  4BPF A;  2CQ8 A;  2KG9 A;  3GZM A;  2EHT A;  2KW2 A;  2N5H A;  2FQ2 A;  2GDX A;  2KOR A;  2KOO A;  2CGQ A;  2FAE A;  3EJB A;  4BPH A;  2JU2 A;  2K0Y A;  1DNY A;  2FVF A;  2FQ1 A;  2LIU A;  4H2W C;  2MR8 A;  2MVU A;  3CE7 A;  4H2X C;  4PWV B;  1OR5 A;  2EHS A;  2LML A;  2AFD A;  2FHS C;  2KGE A;  2KGA A;  2KOP A;  2QNW A;  5HV8 A;  2LTE A;  4BPG A;  1HY8 A;  2K0X A;  2LIW A;  2K2Q A;  2MY5 A;  4H2Y C;  2FVA A;  2KOS A;  2AF8 A;  2GDW A;  5KP6 B;  4R0M A;  2JQ4 A;  2N6Y A;  3NY7 B;  1T8K A;  4DG9 A;  2L0Q A;  2N50 A;  2L22 A;  1F80 D;  2MD9 A;  1ACP A;  2AFE A;  3LMO A;  1L0I A;  2CG5 B;  2DNW A;  2PNG A;  4MRT C;  2LPK A;  3EJE A;  2MF4 A;  3GZL A;  2FVE A;  4PXH B;  2XZ1 C;  4NEO A;  2FAD A;  2FQ0 A;  1VKU A;  2KGC A;  2JGP A;  2K92 A;  2KR5 A;  2LOL A;  2L9F A;  4HKG A;  2MVV A;  2KG6 A;  1DV5 A;  2KG8 A;  2M5R A;  2FAC A;  2VSQ A;  2KOQ A;  2L4B A;  1AF8 A;  5KP8 B;  2LKI A;  1X3O A;  2N6Z A;  2XZ0 D;  1NQ4 A;  1L0H A;  2K94 A;  2CNR A;  2K93 A;  2MR7 A;  5HVC A;  3RG2 A;  4IZ6 A;  5KP7 B;  4CA3 A;  2X2B A;  2ROQ A;  3EJD A;  2N98 A;  2KWL A;  2AVA A;  1HQB A;  1KLP A;  2GDY A;  5CZD B;  2LL8 A;  5EJD A;  2KGD A; 
#chains in the Genus database with same CATH topology
 2N5I A;  1VQN P;  2KW2 A;  3DS1 A;  5HGM A;  2KOD A;  2CGQ A;  1S72 P;  4UHP B;  2BHV A;  2FVF A;  1QRJ A;  2XV6 A;  4H2W C;  2L6E A;  3DS0 A;  1OR5 A;  2EHS A;  2LML A;  1ZNV A;  1M90 Q;  3WBH A;  5HV8 A;  2PY8 A;  4BPG A;  2KOS A;  1YHQ P;  2JQ4 A;  4IPY A;  3NY7 B;  1VQ6 P;  1VQO P;  1IMP A;  5DCK A;  1BXI A;  2L22 A;  2QEX P;  4U0E A;  3CPW O;  2CG5 B;  5BS1 A;  4XFY A;  3G6E P;  3EJE A;  4M0I A;  3GZL A;  4U0B A;  1E0H A;  2GZI A;  1GXG A;  2XZ1 C;  2PEO A;  3G1G A;  2FAD A;  1M74 A;  2L9F A;  4HKG A;  2MVV A;  1DV5 A;  2KG8 A;  1EOQ A;  2M5R A;  1QVG O;  1AYI A;  3CXC O;  2CWO A;  2L4B A;  1AF8 A;  2LKI A;  1K30 A;  3G28 A;  2VLP A;  2XZ0 D;  1M1K Q;  3B5I A;  2CNR A;  5HVC A;  4IZ6 A;  3RG6 C;  4CA3 A;  2X2B A;  1EIA A;  4WYM A;  2NO8 A;  2KWL A;  4XFX A;  2GDY A;  5CZD B;  4PH0 A;  5EJD A;  3CCM P;  2VLO A;  2JU1 A;  3DPH A;  3VRL C;  1K73 Q;  2EHT A;  2QA4 P;  2N5H A;  2OAR A;  3EJB A;  3NTE A;  1Q86 Q;  1AUM A;  4COC A;  2FQ1 A;  2ONT A;  2MVU A;  4PWV B;  3DS3 A;  4PH1 A;  2FHS C;  5BS2 A;  2PEI A;  1YIJ P;  2E1M A;  4H2Y C;  2FVA A;  1YIT P;  4U0F A;  5HGO A;  4R0M A;  2DGY A;  3HYB A;  5I4T G;  2N6Y A;  4XRQ A;  1IMQ A;  1RO0 A;  3DS2 A;  3CC4 P;  2MD9 A;  1QVF O;  2Z46 A;  4U0D A;  1ACP A;  2AFE A;  2XT1 A;  1VQ5 P;  2WPT A;  1CEI A;  5HGN A;  2PNG A;  3CCS P;  2LPK A;  2K0D X;  2EFJ A;  2MF4 A;  2XXM A;  3HZQ A;  1VQK P;  3G71 P;  2FVE A;  1E6J P;  3CMA P;  4NEO A;  3OW2 O;  4COP A;  1YJW P;  3U43 A;  2PEM A;  1VQ7 P;  2OTL P;  1VQM P;  2ERH A;  2FAC A;  1Q81 Q;  5KP8 B;  2M8L A;  3CCJ P;  2N6Z A;  1NQ4 A;  1L0H A;  1EMV A;  3LRY A;  2MR7 A;  2PEQ A;  3RG2 A;  1A8O A;  5F2O A;  1RNI A;  3H4E A;  1MZ8 A;  1KD1 Q;  1YJN P;  1M6E X;  2AVA A;  1KLP A;  2LL8 A;  3G0V A;  1IUQ A;  2CQ8 A;  2KG9 A;  5F2N A;  3GZM A;  2GDX A;  2KOR A;  4BPH A;  2JU2 A;  3DTJ A;  3G29 A;  2MR8 A;  3CE7 A;  3I55 P;  3CD6 P;  4XFZ A;  2LTE A;  1GPJ A;  2K2Q A;  1VQL P;  1RO2 A;  4QNB A;  1VQP P;  2MY5 A;  2AF8 A;  3CCQ P;  3DS4 A;  3CCV P;  3DS5 A;  1A43 A;  1ZMB A;  1VQ9 P;  2Z44 A;  1KQS O;  1UNK A;  2L0Q A;  2LF4 A;  2N50 A;  1F80 D;  3CCU P;  3LMO A;  1L0I A;  2EIA A;  5JPA A;  2DNW A;  4MRT C;  3G4S P;  1KC8 Q;  2GZJ A;  3CC7 P;  4QKO A;  1YJ9 P;  4PXH B;  2JAZ A;  2FQ0 A;  2JGP A;  2K92 A;  2KR5 A;  1UJZ A;  1VQ8 P;  2VLQ A;  2OTJ P;  5EW5 E;  1BAJ A;  2K94 A;  1M6N A;  3CCR P;  2K93 A;  1FR2 A;  5KP7 B;  2ROQ A;  3EJD A;  1Q82 Q;  2N98 A;  2K5X A;  3I56 P;  3CCL P;  2VLN A;  1HQB A;  3M1M A;  2GZG A;  4BPF A;  2PEK A;  2FQ2 A;  1VHN A;  2KOO A;  2FAE A;  2PEN A;  2Z45 A;  3G1I A;  1Z6M A;  2K0Y A;  1DNY A;  2LIU A;  4H2X C;  5F2K A;  3CC2 P;  2P9X A;  1NJI Q;  2AFD A;  2KGE A;  2JYG A;  2KGA A;  2KOP A;  2QNW A;  4GR6 A;  1W2B O;  1JJ2 O;  1HY8 A;  2K0X A;  3CME P;  2LIW A;  2JYL A;  1YI2 P;  4U0A A;  3B4Q A;  2M8N A;  2EG5 A;  2GDW A;  5KP6 B;  2JBG A;  3G21 A;  1T8K A;  4DG9 A;  4XRO A;  3MGE A;  1D1D A;  2GZF A;  4U0C A;  3Q20 A;  1K8A Q;  3G26 A;  4GR2 A;  2GYK A;  2GZE A;  4F37 A;  1VQ4 P;  1VKU A;  2KGC A;  1Q7Y Q;  2JO0 A;  2LOL A;  3GKL C;  2JB0 A;  3H0D A;  2KG6 A;  1K9M Q;  2VSQ A;  7CEI A;  2BUO A;  2KOQ A;  3H47 A;  1X3O A;  1N8R Q;  3CCE P;  2PEJ A;  3E2D A;  1GXH A;  5HGL A;  2M8P A;  3P05 A;  3GJN A;  2KGD A; 
#chains in the Genus database with same CATH homology
 2JU1 A;  2N5I A;  4BPF A;  2CQ8 A;  2KG9 A;  3GZM A;  2EHT A;  2KW2 A;  2N5H A;  2FQ2 A;  2GDX A;  2KOR A;  2KOO A;  2CGQ A;  2FAE A;  3EJB A;  4BPH A;  2JU2 A;  2K0Y A;  1DNY A;  2FVF A;  2FQ1 A;  2LIU A;  4H2W C;  2MR8 A;  2MVU A;  3CE7 A;  4H2X C;  4PWV B;  1OR5 A;  2EHS A;  2LML A;  2AFD A;  2FHS C;  2KGE A;  2KGA A;  2KOP A;  2QNW A;  5HV8 A;  2LTE A;  4BPG A;  1HY8 A;  2K0X A;  2LIW A;  2K2Q A;  2MY5 A;  4H2Y C;  2FVA A;  2KOS A;  2AF8 A;  2GDW A;  5KP6 B;  4R0M A;  2JQ4 A;  2N6Y A;  3NY7 B;  1T8K A;  4DG9 A;  2L0Q A;  2N50 A;  2L22 A;  1F80 D;  2MD9 A;  1ACP A;  2AFE A;  3LMO A;  1L0I A;  2CG5 B;  2DNW A;  2PNG A;  4MRT C;  2LPK A;  3EJE A;  2MF4 A;  3GZL A;  2FVE A;  4PXH B;  2XZ1 C;  4NEO A;  2FAD A;  2FQ0 A;  1VKU A;  2KGC A;  2JGP A;  2K92 A;  2KR5 A;  2LOL A;  2L9F A;  4HKG A;  2MVV A;  2KG6 A;  1DV5 A;  2KG8 A;  2M5R A;  2FAC A;  2VSQ A;  2KOQ A;  2L4B A;  1AF8 A;  5KP8 B;  2LKI A;  1X3O A;  2N6Z A;  2XZ0 D;  1NQ4 A;  1L0H A;  2K94 A;  2CNR A;  2K93 A;  2MR7 A;  5HVC A;  3RG2 A;  4IZ6 A;  5KP7 B;  4CA3 A;  2X2B A;  2ROQ A;  3EJD A;  2N98 A;  2KWL A;  2AVA A;  1HQB A;  1KLP A;  2GDY A;  5CZD B;  2LL8 A;  5EJD A;  2KGD A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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