3GZMA

Crystal structure of holo pfacp reduced monomer
Total Genus 29
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
29
sequence length
78
structure length
78
Chain Sequence
SLKSTFDDIKKIISKQLSVEEDKIQMNSNFTKDLGADSLDLVELIMALEEKFNVTISDQDALKINTVQDAIDYIEKNN
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Plasmodium falciparum acyl carrier protein crystal structures in disulfide-linked and reduced states and their prevalence during blood stage growth.
pubmed doi rcsb
molecule tags Biosynthetic protein
source organism Plasmodium falciparum
molecule keywords Acyl carrier protein
total genus 29
structure length 78
sequence length 78
chains with identical sequence B
ec nomenclature
pdb deposition date 2009-04-07

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 3gzmA00
3CE7A 2FVEA 4IZ6A 2XZ1C 2KWLA 2LTEA 4NEOA 2FHSC 2JGPA 2N5IA 1AF8A 2KOSA 2KOQA 5HVCA 1ACPA 2KORA 2LPKA 2AF8A 5CZDB 2K93A 1L0HA 2N6YA 2FQ2A 2KW2A 2N50A 2CGQA 2KR5A 4H2XC 1X3OA 2KGAA 1HY8A 5KP8B 2LMLA 2JU2A 4CA3A 1NQ4A 2AVAA 2FAEA 2LOLA 4R0MA 2K0XA 1KLPA 3RG2A 4MRTC 1L0IA 2PNGA 2CG5B 2XZ0D 2KGCA 2M5RA 5KP6B 2LKIA 2AFDA 2QNWA 2MR8A 1OR5A 2LIWA 2L0QA 2L9FA 2FQ0A 2L4BA 1VKUA 2KOPA 4H2WC 2FVAA 2DNWA 2FQ1A 3EJEA 2N5HA 2MVVA 2EHSA 2EHTA 1T8KA 2KGDA 2MY5A 4HKGA 2KOOA 2CQ8A 2GDXA 3LMOA 2KG8A 2GDYA 2K92A 1HQBA 2L22A 2K94A 5KP7B 4H2YC 4PXHB 3GZMA 4BPFA 2N98A 2MR7A 5EJDA 2JU1A 1DV5A 2FVFA 4BPGA 2MVUA 3EJBA 4PWVB 2JQ4A 2FADA 2GDWA 2MF4A 3EJDA 2KG9A 2MD9A 2K0YA 2VSQA 4DG9A 2ROQA 2LIUA 2CNRA 2LL8A 2X2BA 1DNYA 2KGEA 3GZLA 4BPHA 2K2QA 2KG6A 1F80D 2N6ZA 2AFEA 2FACA 3NY7B 5HV8A
chains in the Genus database with same CATH superfamily
1RO2A 2Z44A 4IZ6A 2LTEA 5HGMA 1VQ4P 2P9XA 2N5IA 1GXGA 1EOQA 1UNKA 2BUOA 3CMEP 2PEQA 2K93A 4U0DA 2N6YA 2KR5A 1HY8A 3G1IA 1S72P 3CPWO 2PENA 3GKLC 1K8AQ 2AVAA 2FAEA 2K0XA 1GPJA 3I56P 2XXMA 1GXHA 2M5RA 5KP6B 1YJ9P 2ERHA 1E0HA 2AFDA 2QNWA 1OR5A 4U0EA 1IMPA 2L0QA 2L9FA 2OARA 2DNWA 2FQ1A 2MVVA 5F2OA 2MY5A 1T8KA 3DS1A 3M1MA 2PEIA 3LMOA 3DS3A 3G71P 5KP7B 1NJIQ 2DGYA 2M8LA 1QRJA 2N98A 2FVFA 2MVUA 2Z45A 3EJBA 4U0CA 3EJDA 1VQPP 1Q7YQ 3VRLC 2K0DX 2XV6A 2LIUA 3CMAP 2CNRA 3NTEA 1YHQP 2LF4A 2BHVA 4BPHA 1BXIA 4F37A 3G21A 2QEXP 2JAZA 3HYBA 3G29A 4XFYA 4XFZA 4PH0A 2XZ1C 2KWLA 2FHSC 2M8NA 2KOQA 5HVCA 2KORA 2LPKA 1FR2A 2AF8A 2GZEA 4PH1A 4XROA 1L0HA 2CGQA 4H2XC 1X3OA 4QNBA 3B5IA 2ONTA 4COCA 5KP8B 3CCQP 3MGEA 1K9MQ 1A43A 4R0MA 3CXCO 3RG2A 1KLPA 3DTJA 2XZ0D 2VLQA 2E1MA 2FQ0A 4H2WC 5DCKA 2NO8A 3CD6P 3G4SP 3OW2O 5EW5E 2KOOA 3I55P 2GZJA 3CCRP 4M0IA 2GDYA 2K92A 2K94A 3E2DA 1VQMP 3GZMA 4BPFA 1JJ2O 2MR7A 1DV5A 4BPGA 2KODA 4PWVB 2FADA 2GDWA 2KG9A 2MD9A 1VQ8P 1AUMA 2JB0A 1RO0A 1K30A 2GZFA 1M1KQ 3CCUP 3H47A 1MZ8A 2PEOA 3CCMP 2JYGA 1M6NA 2KGEA 2PY8A 2WPTA 2KG6A 3CCSP 5HGOA 1EIAA 2FVEA 1Q81Q 4IPYA 1VQ6P 5I4TG 2KOSA 2CWOA 1YJNP 1ACPA 1KD1Q 5CZDB 2VLOA 3G6EP 2KW2A 2N50A 2KGAA 2JU2A 2VLPA 4CA3A 2PEMA 4XFXA 2GZGA 1M74A 1VQKP 2LOLA 3WBHA 3U43A 3G0VA 4MRTC 1VQ5P 1YIJP 2KGCA 2OTJP 1VQNP 3LRYA 3H0DA 1UJZA 1VKUA 1IUQA 3HZQA 1VQLP 1Q82Q 4U0AA 2XT1A 3EJEA 2N5HA 3G1GA 3H4EA 2EFJA 1VQOP 3CC7P 1Q86Q 1M90Q 2CQ8A 1KC8Q 1VHNA 5HGLA 4H2YC 2Z46A 4PXHB 5EJDA 2JU1A 4WYMA 5F2NA 2JQ4A 2MF4A 1ZMBA 2JO0A 1RNIA 2K0YA 3G28A 2ROQA 1DNYA 3G26A 3DS2A 3CC2P 2K2QA 4XRQA 1K73Q 2N6ZA 2AFEA 2FACA 3CE7A 3DS5A 4NEOA 3P05A 2JGPA 3RG6C 3CCJP 1AF8A 5BS2A 4GR2A 3CCVP 2FQ2A 2LMLA 3DPHA 5HGNA 1VQ7P 3GJNA 2JYLA 1NQ4A 4QKOA 2GYKA 1QVGO 4COPA 1L0IA 1IMQA 1N8RQ 2EIAA 2PNGA 2CG5B 3CCEP 4U0BA 1YJWP 1E6JP 2LKIA 2K5XA 2JBGA 2MR8A 3CC4P 1EMVA 2LIWA 2L4BA 2KOPA 3DS0A 1QVFO 2FVAA 2L6EA 1ZNVA 2GZIA 1YITP 1W2BO 2EHSA 2EHTA 2M8PA 2KGDA 1AYIA 4HKGA 2PEKA 3Q20A 3DS4A 1KQSO 5JPAA 2GDXA 2KG8A 1HQBA 2L22A 2VLNA 1Z6MA 7CEIA 1BAJA 3CCLP 2OTLP 4U0FA 2EG5A 1A8OA 4GR6A 5BS1A 1YI2P 2QA4P 2VSQA 5F2KA 1CEIA 4DG9A 1D1DA 2LL8A 3B4QA 2X2BA 1VQ9P 3GZLA 4UHPB 1M6EX 1F80D 2PEJA 3NY7B 5HV8A
chains in the Genus database with same CATH topology
3CE7A 2FVEA 4IZ6A 2XZ1C 2KWLA 2LTEA 4NEOA 2FHSC 2JGPA 2N5IA 1AF8A 2KOSA 2KOQA 5HVCA 1ACPA 2KORA 2LPKA 2AF8A 5CZDB 2K93A 1L0HA 2N6YA 2FQ2A 2KW2A 2N50A 2CGQA 2KR5A 4H2XC 1X3OA 2KGAA 1HY8A 5KP8B 2LMLA 2JU2A 4CA3A 1NQ4A 2AVAA 2FAEA 2LOLA 4R0MA 2K0XA 1KLPA 3RG2A 4MRTC 1L0IA 2PNGA 2CG5B 2XZ0D 2KGCA 2M5RA 5KP6B 2LKIA 2AFDA 2QNWA 2MR8A 1OR5A 2LIWA 2L0QA 2L9FA 2FQ0A 2L4BA 1VKUA 2KOPA 4H2WC 2FVAA 2DNWA 2FQ1A 3EJEA 2N5HA 2MVVA 2EHSA 2EHTA 1T8KA 2KGDA 2MY5A 4HKGA 2KOOA 2CQ8A 2GDXA 3LMOA 2KG8A 2GDYA 2K92A 1HQBA 2L22A 2K94A 5KP7B 4H2YC 4PXHB 3GZMA 4BPFA 2N98A 2MR7A 5EJDA 2JU1A 1DV5A 2FVFA 4BPGA 2MVUA 3EJBA 4PWVB 2JQ4A 2FADA 2GDWA 2MF4A 3EJDA 2KG9A 2MD9A 2K0YA 2VSQA 4DG9A 2ROQA 2LIUA 2CNRA 2LL8A 2X2BA 1DNYA 2KGEA 3GZLA 4BPHA 2K2QA 2KG6A 1F80D 2N6ZA 2AFEA 2FACA 3NY7B 5HV8A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3CE7 A;  2FVE A;  4IZ6 A;  2XZ1 C;  2KWL A;  2LTE A;  4NEO A;  2FHS C;  2JGP A;  2N5I A;  1AF8 A;  2KOS A;  2KOQ A;  5HVC A;  1ACP A;  2KOR A;  2LPK A;  2AF8 A;  5CZD B;  2K93 A;  1L0H A;  2N6Y A;  2FQ2 A;  2KW2 A;  2N50 A;  2CGQ A;  2KR5 A;  4H2X C;  1X3O A;  2KGA A;  1HY8 A;  5KP8 B;  2LML A;  2JU2 A;  4CA3 A;  1NQ4 A;  2AVA A;  2FAE A;  2LOL A;  4R0M A;  2K0X A;  1KLP A;  3RG2 A;  4MRT C;  1L0I A;  2PNG A;  2CG5 B;  2XZ0 D;  2KGC A;  2M5R A;  5KP6 B;  2LKI A;  2AFD A;  2QNW A;  2MR8 A;  1OR5 A;  2LIW A;  2L0Q A;  2L9F A;  2FQ0 A;  2L4B A;  1VKU A;  2KOP A;  4H2W C;  2FVA A;  2DNW A;  2FQ1 A;  3EJE A;  2N5H A;  2MVV A;  2EHS A;  2EHT A;  1T8K A;  2KGD A;  2MY5 A;  4HKG A;  2KOO A;  2CQ8 A;  2GDX A;  3LMO A;  2KG8 A;  2GDY A;  2K92 A;  1HQB A;  2L22 A;  2K94 A;  5KP7 B;  4H2Y C;  4PXH B;  3GZM A;  4BPF A;  2N98 A;  2MR7 A;  5EJD A;  2JU1 A;  1DV5 A;  2FVF A;  4BPG A;  2MVU A;  3EJB A;  4PWV B;  2JQ4 A;  2FAD A;  2GDW A;  2MF4 A;  3EJD A;  2KG9 A;  2MD9 A;  2K0Y A;  2VSQ A;  4DG9 A;  2ROQ A;  2LIU A;  2CNR A;  2LL8 A;  2X2B A;  1DNY A;  2KGE A;  3GZL A;  4BPH A;  2K2Q A;  2KG6 A;  1F80 D;  2N6Z A;  2AFE A;  2FAC A;  3NY7 B;  5HV8 A; 
#chains in the Genus database with same CATH topology
 1RO2 A;  2Z44 A;  4IZ6 A;  2LTE A;  5HGM A;  1VQ4 P;  2P9X A;  2N5I A;  1GXG A;  1EOQ A;  1UNK A;  2BUO A;  3CME P;  2PEQ A;  2K93 A;  4U0D A;  2N6Y A;  2KR5 A;  1HY8 A;  3G1I A;  1S72 P;  3CPW O;  2PEN A;  3GKL C;  1K8A Q;  2AVA A;  2FAE A;  2K0X A;  1GPJ A;  3I56 P;  2XXM A;  1GXH A;  2M5R A;  5KP6 B;  1YJ9 P;  2ERH A;  1E0H A;  2AFD A;  2QNW A;  1OR5 A;  4U0E A;  1IMP A;  2L0Q A;  2L9F A;  2OAR A;  2DNW A;  2FQ1 A;  2MVV A;  5F2O A;  2MY5 A;  1T8K A;  3DS1 A;  3M1M A;  2PEI A;  3LMO A;  3DS3 A;  3G71 P;  5KP7 B;  1NJI Q;  2DGY A;  2M8L A;  1QRJ A;  2N98 A;  2FVF A;  2MVU A;  2Z45 A;  3EJB A;  4U0C A;  3EJD A;  1VQP P;  1Q7Y Q;  3VRL C;  2K0D X;  2XV6 A;  2LIU A;  3CMA P;  2CNR A;  3NTE A;  1YHQ P;  2LF4 A;  2BHV A;  4BPH A;  1BXI A;  4F37 A;  3G21 A;  2QEX P;  2JAZ A;  3HYB A;  3G29 A;  4XFY A;  4XFZ A;  4PH0 A;  2XZ1 C;  2KWL A;  2FHS C;  2M8N A;  2KOQ A;  5HVC A;  2KOR A;  2LPK A;  1FR2 A;  2AF8 A;  2GZE A;  4PH1 A;  4XRO A;  1L0H A;  2CGQ A;  4H2X C;  1X3O A;  4QNB A;  3B5I A;  2ONT A;  4COC A;  5KP8 B;  3CCQ P;  3MGE A;  1K9M Q;  1A43 A;  4R0M A;  3CXC O;  3RG2 A;  1KLP A;  3DTJ A;  2XZ0 D;  2VLQ A;  2E1M A;  2FQ0 A;  4H2W C;  5DCK A;  2NO8 A;  3CD6 P;  3G4S P;  3OW2 O;  5EW5 E;  2KOO A;  3I55 P;  2GZJ A;  3CCR P;  4M0I A;  2GDY A;  2K92 A;  2K94 A;  3E2D A;  1VQM P;  3GZM A;  4BPF A;  1JJ2 O;  2MR7 A;  1DV5 A;  4BPG A;  2KOD A;  4PWV B;  2FAD A;  2GDW A;  2KG9 A;  2MD9 A;  1VQ8 P;  1AUM A;  2JB0 A;  1RO0 A;  1K30 A;  2GZF A;  1M1K Q;  3CCU P;  3H47 A;  1MZ8 A;  2PEO A;  3CCM P;  2JYG A;  1M6N A;  2KGE A;  2PY8 A;  2WPT A;  2KG6 A;  3CCS P;  5HGO A;  1EIA A;  2FVE A;  1Q81 Q;  4IPY A;  1VQ6 P;  5I4T G;  2KOS A;  2CWO A;  1YJN P;  1ACP A;  1KD1 Q;  5CZD B;  2VLO A;  3G6E P;  2KW2 A;  2N50 A;  2KGA A;  2JU2 A;  2VLP A;  4CA3 A;  2PEM A;  4XFX A;  2GZG A;  1M74 A;  1VQK P;  2LOL A;  3WBH A;  3U43 A;  3G0V A;  4MRT C;  1VQ5 P;  1YIJ P;  2KGC A;  2OTJ P;  1VQN P;  3LRY A;  3H0D A;  1UJZ A;  1VKU A;  1IUQ A;  3HZQ A;  1VQL P;  1Q82 Q;  4U0A A;  2XT1 A;  3EJE A;  2N5H A;  3G1G A;  3H4E A;  2EFJ A;  1VQO P;  3CC7 P;  1Q86 Q;  1M90 Q;  2CQ8 A;  1KC8 Q;  1VHN A;  5HGL A;  4H2Y C;  2Z46 A;  4PXH B;  5EJD A;  2JU1 A;  4WYM A;  5F2N A;  2JQ4 A;  2MF4 A;  1ZMB A;  2JO0 A;  1RNI A;  2K0Y A;  3G28 A;  2ROQ A;  1DNY A;  3G26 A;  3DS2 A;  3CC2 P;  2K2Q A;  4XRQ A;  1K73 Q;  2N6Z A;  2AFE A;  2FAC A;  3CE7 A;  3DS5 A;  4NEO A;  3P05 A;  2JGP A;  3RG6 C;  3CCJ P;  1AF8 A;  5BS2 A;  4GR2 A;  3CCV P;  2FQ2 A;  2LML A;  3DPH A;  5HGN A;  1VQ7 P;  3GJN A;  2JYL A;  1NQ4 A;  4QKO A;  2GYK A;  1QVG O;  4COP A;  1L0I A;  1IMQ A;  1N8R Q;  2EIA A;  2PNG A;  2CG5 B;  3CCE P;  4U0B A;  1YJW P;  1E6J P;  2LKI A;  2K5X A;  2JBG A;  2MR8 A;  3CC4 P;  1EMV A;  2LIW A;  2L4B A;  2KOP A;  3DS0 A;  1QVF O;  2FVA A;  2L6E A;  1ZNV A;  2GZI A;  1YIT P;  1W2B O;  2EHS A;  2EHT A;  2M8P A;  2KGD A;  1AYI A;  4HKG A;  2PEK A;  3Q20 A;  3DS4 A;  1KQS O;  5JPA A;  2GDX A;  2KG8 A;  1HQB A;  2L22 A;  2VLN A;  1Z6M A;  7CEI A;  1BAJ A;  3CCL P;  2OTL P;  4U0F A;  2EG5 A;  1A8O A;  4GR6 A;  5BS1 A;  1YI2 P;  2QA4 P;  2VSQ A;  5F2K A;  1CEI A;  4DG9 A;  1D1D A;  2LL8 A;  3B4Q A;  2X2B A;  1VQ9 P;  3GZL A;  4UHP B;  1M6E X;  1F80 D;  2PEJ A;  3NY7 B;  5HV8 A; 
#chains in the Genus database with same CATH homology
 3CE7 A;  2FVE A;  4IZ6 A;  2XZ1 C;  2KWL A;  2LTE A;  4NEO A;  2FHS C;  2JGP A;  2N5I A;  1AF8 A;  2KOS A;  2KOQ A;  5HVC A;  1ACP A;  2KOR A;  2LPK A;  2AF8 A;  5CZD B;  2K93 A;  1L0H A;  2N6Y A;  2FQ2 A;  2KW2 A;  2N50 A;  2CGQ A;  2KR5 A;  4H2X C;  1X3O A;  2KGA A;  1HY8 A;  5KP8 B;  2LML A;  2JU2 A;  4CA3 A;  1NQ4 A;  2AVA A;  2FAE A;  2LOL A;  4R0M A;  2K0X A;  1KLP A;  3RG2 A;  4MRT C;  1L0I A;  2PNG A;  2CG5 B;  2XZ0 D;  2KGC A;  2M5R A;  5KP6 B;  2LKI A;  2AFD A;  2QNW A;  2MR8 A;  1OR5 A;  2LIW A;  2L0Q A;  2L9F A;  2FQ0 A;  2L4B A;  1VKU A;  2KOP A;  4H2W C;  2FVA A;  2DNW A;  2FQ1 A;  3EJE A;  2N5H A;  2MVV A;  2EHS A;  2EHT A;  1T8K A;  2KGD A;  2MY5 A;  4HKG A;  2KOO A;  2CQ8 A;  2GDX A;  3LMO A;  2KG8 A;  2GDY A;  2K92 A;  1HQB A;  2L22 A;  2K94 A;  5KP7 B;  4H2Y C;  4PXH B;  3GZM A;  4BPF A;  2N98 A;  2MR7 A;  5EJD A;  2JU1 A;  1DV5 A;  2FVF A;  4BPG A;  2MVU A;  3EJB A;  4PWV B;  2JQ4 A;  2FAD A;  2GDW A;  2MF4 A;  3EJD A;  2KG9 A;  2MD9 A;  2K0Y A;  2VSQ A;  4DG9 A;  2ROQ A;  2LIU A;  2CNR A;  2LL8 A;  2X2B A;  1DNY A;  2KGE A;  3GZL A;  4BPH A;  2K2Q A;  2KG6 A;  1F80 D;  2N6Z A;  2AFE A;  2FAC A;  3NY7 B;  5HV8 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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