2KOSA

Nmr solution structures of octanoyl-acp from streptomyces coelicolor fatty acid synthase
Total Genus 20
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
20
sequence length
81
structure length
81
Chain Sequence
AATQEEIVAGLAEIVNEIAGIPVEDVKLDKSFTDDLDVDSLSMVEVVVAAEERFDVKIPDDDVKNLKTVGDATKYILDHQA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transport protein
molecule keywords Acyl carrier protein
publication title Recognition of intermediate functionality by acyl carrier protein over a complete cycle of fatty acid biosynthesis
pubmed doi rcsb
source organism Streptomyces coelicolor
total genus 20
structure length 81
sequence length 81
ec nomenclature
pdb deposition date 2009-09-29

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2kosA00
2K93A 1DV5A 2LIUA 1AF8A 4DG9A 2KG8A 3GZMA 2EHSA 2LMLA 2FQ0A 4BPGA 2CGQA 2KGEA 3EJEA 4BPFA 1NQ4A 2FADA 3RG2A 2L22A 2JQ4A 2LKIA 2KOPA 2KWLA 2K92A 4H2YC 2MR8A 2LTEA 2FQ1A 2CNRA 2KOSA 3GZLA 2DNWA 5EJDA 2N50A 1ACPA 2CG5B 2N5HA 1KLPA 4BPHA 2MD9A 2KG9A 4PWVB 1DNYA 2L0QA 2GDWA 2FVFA 2XZ1C 1L0HA 3NY7B 2M5RA 4R0MA 2LIWA 3EJDA 4PXHB 2K0XA 5KP6B 2L9FA 2FVEA 2K94A 2MF4A 5CZDB 1HQBA 3EJBA 5HVCA 2XZ0D 5HV8A 2PNGA 2KGDA 4HKGA 2KOQA 2JU2A 2MY5A 1X3OA 4H2XC 2AFEA 2FAEA 2GDXA 4MRTC 2FHSC 2FVAA 2LOLA 2KGAA 2QNWA 2JGPA 2KORA 1VKUA 2MVVA 2CQ8A 2KOOA 4CA3A 5KP8B 2LPKA 2K0YA 1HY8A 5KP7B 2MVUA 2FACA 2AVAA 2FQ2A 2KW2A 2VSQA 2KGCA 4NEOA 2GDYA 2L4BA 4IZ6A 2LL8A 2ROQA 2K2QA 4H2WC 2EHTA 2N6YA 2N98A 3LMOA 2MR7A 2AF8A 2JU1A 3CE7A 2N5IA 1F80D 1L0IA 2X2BA 2N6ZA 2KR5A 1OR5A 2KG6A 1T8KA 2AFDA
chains in the Genus database with same CATH superfamily
3HZQA 2KG8A 2JO0A 3DS1A 4BPGA 2KGEA 3G26A 4BPFA 3CCLP 2NO8A 4UHPB 3RG2A 2JQ4A 5I4TG 2KWLA 1KC8Q 2M8NA 2CNRA 2PEQA 1E0HA 5EJDA 3G1IA 2N5HA 4BPHA 2KG9A 4COPA 5DCKA 3U43A 2FVFA 3DTJA 1L0HA 2M5RA 1EIAA 5BS1A 3EJDA 4PXHB 2VLOA 2XT1A 2K0XA 4GR6A 2L9FA 2PEKA 2K94A 4PH0A 5CZDB 1HQBA 4U0CA 2M8LA 2PNGA 2KGDA 1K73Q 2Z46A 3B5IA 2FAEA 2JGPA 2VLNA 3G21A 2CQ8A 2PEOA 1GXGA 1QVGO 1YJ9P 2QEXP 2K0YA 1IUQA 5F2KA 1VQKP 2KGCA 4NEOA 1VQ5P 4XRQA 1EOQA 2K2QA 3CD6P 2GZIA 2EHTA 3LMOA 3G1GA 2MR7A 2GYKA 3CPWO 7CEIA 4XFYA 1L0IA 2AFDA 1VQ7P 1BXIA 4U0EA 1BAJA 1DV5A 4DG9A 2EHSA 2LMLA 1UJZA 2JB0A 3VRLC 2FADA 5HGOA 2LKIA 2K92A 4F37A 3MGEA 3CC2P 2N50A 1KLPA 3NTEA 1DNYA 3G28A 2XZ1C 3CXCO 3P05A 3NY7B 4GR2A 3LRYA 1M90Q 2FVEA 4XFZA 2MF4A 1YHQP 1JJ2O 3EJBA 5HVCA 4QNBA 2EG5A 3DS5A 2EIAA 5HGMA 5F2OA 2KOQA 3Q20A 3DS0A 1AUMA 2FVAA 2LOLA 1Q82Q 2KGAA 2OTJP 5F2NA 2QNWA 1KD1Q 2KORA 2MVVA 2KOOA 1VQ6P 1A43A 1N8RQ 1HY8A 2ERHA 2BHVA 1YIJP 1ZNVA 2FACA 2AVAA 2FQ2A 3G0VA 2GDYA 2L4BA 1GPJA 4IZ6A 4PH1A 2N6YA 2AF8A 3CE7A 3DS4A 2KR5A 1OR5A 1YJWP 3CCEP 4IPYA 2M8PA 1RNIA 2Z44A 2LIUA 1YI2P 1KQSO 5BS2A 2FQ0A 1EMVA 2CGQA 2ONTA 3GKLC 2BUOA 1YITP 3CCVP 1NQ4A 2VLQA 4H2YC 2LTEA 2KOSA 3GZLA 3I56P 1ACPA 2JYGA 2MD9A 1UNKA 4PWVB 2GDWA 1VQMP 1K8AQ 1M1KQ 2L6EA 3CC7P 1VHNA 3G6EP 2JYLA 1K30A 1AYIA 3H0DA 3CCMP 4COCA 3B4QA 1YJNP 4U0FA 3H47A 1NJIQ 2GZGA 2GZFA 2PY8A 2XZ0D 5HV8A 3H4EA 1D1DA 4HKGA 3G4SP 2JU2A 2MY5A 1X3OA 2K0DX 1K9MQ 4H2XC 3DS3A 2AFEA 3I55P 2XXMA 2GDXA 1Q86Q 1Z6MA 2EFJA 1A8OA 2P9XA 1MZ8A 3WBHA 3OW2O 1VQNP 1GXHA 1RO2A 3G29A 4CA3A 2LPKA 3M1MA 1VQ4P 3CCSP 4U0AA 2KW2A 2VSQA 2PEJA 2WPTA 1FR2A 4U0DA 2ROQA 2JAZA 4H2WC 2N98A 3DS2A 2JU1A 3CC4P 1E6JP 1IMPA 4U0BA 1M74A 2KG6A 1T8KA 2PEMA 3E2DA 2K93A 1AF8A 3GZMA 5JPAA 1S72P 3EJEA 4QKOA 2GZEA 2L22A 2KOPA 1VQ8P 3CCQP 1W2BO 2LF4A 2MR8A 2FQ1A 2DNWA 2CG5B 2GZJA 2KODA 5HGLA 2L0QA 3GJNA 2CWOA 1RO0A 2E1MA 1IMQA 4R0MA 1CEIA 2LIWA 3CMEP 3RG6C 5KP6B 2PEIA 2QA4P 4M0IA 1ZMBA 4XFXA 4WYMA 2VLPA 3CCJP 1VQPP 1QRJA 4MRTC 2FHSC 5EW5E 2JBGA 2DGYA 1VKUA 1M6EX 2OARA 2XV6A 5KP8B 5KP7B 2MVUA 3CMAP 1VQOP 2OTLP 3CCUP 1Q81Q 2K5XA 3DPHA 2LL8A 3HYBA 1QVFO 4XROA 1Q7YQ 1VQ9P 1VQLP 2N5IA 1F80D 2X2BA 5HGNA 3CCRP 2N6ZA 2PENA 1M6NA 3G71P 2Z45A
chains in the Genus database with same CATH topology
2K93A 1DV5A 2LIUA 1AF8A 4DG9A 2KG8A 3GZMA 2EHSA 2LMLA 2FQ0A 4BPGA 2CGQA 2KGEA 3EJEA 4BPFA 1NQ4A 2FADA 3RG2A 2L22A 2JQ4A 2LKIA 2KOPA 2KWLA 2K92A 4H2YC 2MR8A 2LTEA 2FQ1A 2CNRA 2KOSA 3GZLA 2DNWA 5EJDA 2N50A 1ACPA 2CG5B 2N5HA 1KLPA 4BPHA 2MD9A 2KG9A 4PWVB 1DNYA 2L0QA 2GDWA 2FVFA 2XZ1C 1L0HA 3NY7B 2M5RA 4R0MA 2LIWA 3EJDA 4PXHB 2K0XA 5KP6B 2L9FA 2FVEA 2K94A 2MF4A 5CZDB 1HQBA 3EJBA 5HVCA 2XZ0D 5HV8A 2PNGA 2KGDA 4HKGA 2KOQA 2JU2A 2MY5A 1X3OA 4H2XC 2AFEA 2FAEA 2GDXA 4MRTC 2FHSC 2FVAA 2LOLA 2KGAA 2QNWA 2JGPA 2KORA 1VKUA 2MVVA 2CQ8A 2KOOA 4CA3A 5KP8B 2LPKA 2K0YA 1HY8A 5KP7B 2MVUA 2FACA 2AVAA 2FQ2A 2KW2A 2VSQA 2KGCA 4NEOA 2GDYA 2L4BA 4IZ6A 2LL8A 2ROQA 2K2QA 4H2WC 2EHTA 2N6YA 2N98A 3LMOA 2MR7A 2AF8A 2JU1A 3CE7A 2N5IA 1F80D 1L0IA 2X2BA 2N6ZA 2KR5A 1OR5A 2KG6A 1T8KA 2AFDA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2K93 A;  1DV5 A;  2LIU A;  1AF8 A;  4DG9 A;  2KG8 A;  3GZM A;  2EHS A;  2LML A;  2FQ0 A;  4BPG A;  2CGQ A;  2KGE A;  3EJE A;  4BPF A;  1NQ4 A;  2FAD A;  3RG2 A;  2L22 A;  2JQ4 A;  2LKI A;  2KOP A;  2KWL A;  2K92 A;  4H2Y C;  2MR8 A;  2LTE A;  2FQ1 A;  2CNR A;  2KOS A;  3GZL A;  2DNW A;  5EJD A;  2N50 A;  1ACP A;  2CG5 B;  2N5H A;  1KLP A;  4BPH A;  2MD9 A;  2KG9 A;  4PWV B;  1DNY A;  2L0Q A;  2GDW A;  2FVF A;  2XZ1 C;  1L0H A;  3NY7 B;  2M5R A;  4R0M A;  2LIW A;  3EJD A;  4PXH B;  2K0X A;  5KP6 B;  2L9F A;  2FVE A;  2K94 A;  2MF4 A;  5CZD B;  1HQB A;  3EJB A;  5HVC A;  2XZ0 D;  5HV8 A;  2PNG A;  2KGD A;  4HKG A;  2KOQ A;  2JU2 A;  2MY5 A;  1X3O A;  4H2X C;  2AFE A;  2FAE A;  2GDX A;  4MRT C;  2FHS C;  2FVA A;  2LOL A;  2KGA A;  2QNW A;  2JGP A;  2KOR A;  1VKU A;  2MVV A;  2CQ8 A;  2KOO A;  4CA3 A;  5KP8 B;  2LPK A;  2K0Y A;  1HY8 A;  5KP7 B;  2MVU A;  2FAC A;  2AVA A;  2FQ2 A;  2KW2 A;  2VSQ A;  2KGC A;  4NEO A;  2GDY A;  2L4B A;  4IZ6 A;  2LL8 A;  2ROQ A;  2K2Q A;  4H2W C;  2EHT A;  2N6Y A;  2N98 A;  3LMO A;  2MR7 A;  2AF8 A;  2JU1 A;  3CE7 A;  2N5I A;  1F80 D;  1L0I A;  2X2B A;  2N6Z A;  2KR5 A;  1OR5 A;  2KG6 A;  1T8K A;  2AFD A; 
#chains in the Genus database with same CATH topology
 3HZQ A;  2KG8 A;  2JO0 A;  3DS1 A;  4BPG A;  2KGE A;  3G26 A;  4BPF A;  3CCL P;  2NO8 A;  4UHP B;  3RG2 A;  2JQ4 A;  5I4T G;  2KWL A;  1KC8 Q;  2M8N A;  2CNR A;  2PEQ A;  1E0H A;  5EJD A;  3G1I A;  2N5H A;  4BPH A;  2KG9 A;  4COP A;  5DCK A;  3U43 A;  2FVF A;  3DTJ A;  1L0H A;  2M5R A;  1EIA A;  5BS1 A;  3EJD A;  4PXH B;  2VLO A;  2XT1 A;  2K0X A;  4GR6 A;  2L9F A;  2PEK A;  2K94 A;  4PH0 A;  5CZD B;  1HQB A;  4U0C A;  2M8L A;  2PNG A;  2KGD A;  1K73 Q;  2Z46 A;  3B5I A;  2FAE A;  2JGP A;  2VLN A;  3G21 A;  2CQ8 A;  2PEO A;  1GXG A;  1QVG O;  1YJ9 P;  2QEX P;  2K0Y A;  1IUQ A;  5F2K A;  1VQK P;  2KGC A;  4NEO A;  1VQ5 P;  4XRQ A;  1EOQ A;  2K2Q A;  3CD6 P;  2GZI A;  2EHT A;  3LMO A;  3G1G A;  2MR7 A;  2GYK A;  3CPW O;  7CEI A;  4XFY A;  1L0I A;  2AFD A;  1VQ7 P;  1BXI A;  4U0E A;  1BAJ A;  1DV5 A;  4DG9 A;  2EHS A;  2LML A;  1UJZ A;  2JB0 A;  3VRL C;  2FAD A;  5HGO A;  2LKI A;  2K92 A;  4F37 A;  3MGE A;  3CC2 P;  2N50 A;  1KLP A;  3NTE A;  1DNY A;  3G28 A;  2XZ1 C;  3CXC O;  3P05 A;  3NY7 B;  4GR2 A;  3LRY A;  1M90 Q;  2FVE A;  4XFZ A;  2MF4 A;  1YHQ P;  1JJ2 O;  3EJB A;  5HVC A;  4QNB A;  2EG5 A;  3DS5 A;  2EIA A;  5HGM A;  5F2O A;  2KOQ A;  3Q20 A;  3DS0 A;  1AUM A;  2FVA A;  2LOL A;  1Q82 Q;  2KGA A;  2OTJ P;  5F2N A;  2QNW A;  1KD1 Q;  2KOR A;  2MVV A;  2KOO A;  1VQ6 P;  1A43 A;  1N8R Q;  1HY8 A;  2ERH A;  2BHV A;  1YIJ P;  1ZNV A;  2FAC A;  2AVA A;  2FQ2 A;  3G0V A;  2GDY A;  2L4B A;  1GPJ A;  4IZ6 A;  4PH1 A;  2N6Y A;  2AF8 A;  3CE7 A;  3DS4 A;  2KR5 A;  1OR5 A;  1YJW P;  3CCE P;  4IPY A;  2M8P A;  1RNI A;  2Z44 A;  2LIU A;  1YI2 P;  1KQS O;  5BS2 A;  2FQ0 A;  1EMV A;  2CGQ A;  2ONT A;  3GKL C;  2BUO A;  1YIT P;  3CCV P;  1NQ4 A;  2VLQ A;  4H2Y C;  2LTE A;  2KOS A;  3GZL A;  3I56 P;  1ACP A;  2JYG A;  2MD9 A;  1UNK A;  4PWV B;  2GDW A;  1VQM P;  1K8A Q;  1M1K Q;  2L6E A;  3CC7 P;  1VHN A;  3G6E P;  2JYL A;  1K30 A;  1AYI A;  3H0D A;  3CCM P;  4COC A;  3B4Q A;  1YJN P;  4U0F A;  3H47 A;  1NJI Q;  2GZG A;  2GZF A;  2PY8 A;  2XZ0 D;  5HV8 A;  3H4E A;  1D1D A;  4HKG A;  3G4S P;  2JU2 A;  2MY5 A;  1X3O A;  2K0D X;  1K9M Q;  4H2X C;  3DS3 A;  2AFE A;  3I55 P;  2XXM A;  2GDX A;  1Q86 Q;  1Z6M A;  2EFJ A;  1A8O A;  2P9X A;  1MZ8 A;  3WBH A;  3OW2 O;  1VQN P;  1GXH A;  1RO2 A;  3G29 A;  4CA3 A;  2LPK A;  3M1M A;  1VQ4 P;  3CCS P;  4U0A A;  2KW2 A;  2VSQ A;  2PEJ A;  2WPT A;  1FR2 A;  4U0D A;  2ROQ A;  2JAZ A;  4H2W C;  2N98 A;  3DS2 A;  2JU1 A;  3CC4 P;  1E6J P;  1IMP A;  4U0B A;  1M74 A;  2KG6 A;  1T8K A;  2PEM A;  3E2D A;  2K93 A;  1AF8 A;  3GZM A;  5JPA A;  1S72 P;  3EJE A;  4QKO A;  2GZE A;  2L22 A;  2KOP A;  1VQ8 P;  3CCQ P;  1W2B O;  2LF4 A;  2MR8 A;  2FQ1 A;  2DNW A;  2CG5 B;  2GZJ A;  2KOD A;  5HGL A;  2L0Q A;  3GJN A;  2CWO A;  1RO0 A;  2E1M A;  1IMQ A;  4R0M A;  1CEI A;  2LIW A;  3CME P;  3RG6 C;  5KP6 B;  2PEI A;  2QA4 P;  4M0I A;  1ZMB A;  4XFX A;  4WYM A;  2VLP A;  3CCJ P;  1VQP P;  1QRJ A;  4MRT C;  2FHS C;  5EW5 E;  2JBG A;  2DGY A;  1VKU A;  1M6E X;  2OAR A;  2XV6 A;  5KP8 B;  5KP7 B;  2MVU A;  3CMA P;  1VQO P;  2OTL P;  3CCU P;  1Q81 Q;  2K5X A;  3DPH A;  2LL8 A;  3HYB A;  1QVF O;  4XRO A;  1Q7Y Q;  1VQ9 P;  1VQL P;  2N5I A;  1F80 D;  2X2B A;  5HGN A;  3CCR P;  2N6Z A;  2PEN A;  1M6N A;  3G71 P;  2Z45 A; 
#chains in the Genus database with same CATH homology
 2K93 A;  1DV5 A;  2LIU A;  1AF8 A;  4DG9 A;  2KG8 A;  3GZM A;  2EHS A;  2LML A;  2FQ0 A;  4BPG A;  2CGQ A;  2KGE A;  3EJE A;  4BPF A;  1NQ4 A;  2FAD A;  3RG2 A;  2L22 A;  2JQ4 A;  2LKI A;  2KOP A;  2KWL A;  2K92 A;  4H2Y C;  2MR8 A;  2LTE A;  2FQ1 A;  2CNR A;  2KOS A;  3GZL A;  2DNW A;  5EJD A;  2N50 A;  1ACP A;  2CG5 B;  2N5H A;  1KLP A;  4BPH A;  2MD9 A;  2KG9 A;  4PWV B;  1DNY A;  2L0Q A;  2GDW A;  2FVF A;  2XZ1 C;  1L0H A;  3NY7 B;  2M5R A;  4R0M A;  2LIW A;  3EJD A;  4PXH B;  2K0X A;  5KP6 B;  2L9F A;  2FVE A;  2K94 A;  2MF4 A;  5CZD B;  1HQB A;  3EJB A;  5HVC A;  2XZ0 D;  5HV8 A;  2PNG A;  2KGD A;  4HKG A;  2KOQ A;  2JU2 A;  2MY5 A;  1X3O A;  4H2X C;  2AFE A;  2FAE A;  2GDX A;  4MRT C;  2FHS C;  2FVA A;  2LOL A;  2KGA A;  2QNW A;  2JGP A;  2KOR A;  1VKU A;  2MVV A;  2CQ8 A;  2KOO A;  4CA3 A;  5KP8 B;  2LPK A;  2K0Y A;  1HY8 A;  5KP7 B;  2MVU A;  2FAC A;  2AVA A;  2FQ2 A;  2KW2 A;  2VSQ A;  2KGC A;  4NEO A;  2GDY A;  2L4B A;  4IZ6 A;  2LL8 A;  2ROQ A;  2K2Q A;  4H2W C;  2EHT A;  2N6Y A;  2N98 A;  3LMO A;  2MR7 A;  2AF8 A;  2JU1 A;  3CE7 A;  2N5I A;  1F80 D;  1L0I A;  2X2B A;  2N6Z A;  2KR5 A;  1OR5 A;  2KG6 A;  1T8K A;  2AFD A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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