1VKUA

Crystal structure of acyl carrier protein (tm0175) from thermotoga maritima at 2.00 a resolution
Total Genus 27
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
27
sequence length
85
structure length
85
Chain Sequence
HHHMERKKLIAKFVEIASEKMGKDLETVDEENTFKELGFDSIDVIDLVMFFEDEFALRIEDEEISKIRKVKDLIDIVIKKLEEID
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Biosynthetic protein
molecule keywords acyl carrier protein
publication title Crystal structure of Acyl carrier protein (TM0175) from Thermotoga maritima at 2.00 A resolution
rcsb
source organism Thermotoga maritima
total genus 27
structure length 85
sequence length 85
ec nomenclature
pdb deposition date 2004-06-18

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 1vkuA00
2GDYA 2MVVA 4MRTC 4BPGA 2CNRA 2JU2A 2XZ1C 2FVAA 2KG8A 2N5IA 3NY7B 5KP6B 2AFDA 2N6ZA 2KGDA 3EJDA 4CA3A 1L0HA 2QNWA 1HY8A 4H2YC 2GDWA 3LMOA 5EJDA 2FAEA 2KR5A 1OR5A 2JGPA 2KGCA 2N98A 3GZLA 2PNGA 2VSQA 2JQ4A 2CGQA 2MR8A 2ROQA 5CZDB 1X3OA 2FQ1A 2XZ0D 5HVCA 3RG2A 1F80D 2L0QA 1VKUA 3EJEA 2FACA 2K0YA 2KG6A 2LTEA 2FHSC 3EJBA 2M5RA 2AVAA 2LL8A 4H2WC 2L22A 2AF8A 4H2XC 2N6YA 2CG5B 2FVFA 4PWVB 4PXHB 1ACPA 2JU1A 1AF8A 1NQ4A 2FADA 2LPKA 4HKGA 1DNYA 1T8KA 2FQ0A 2KOOA 3GZMA 2K94A 2N5HA 2KORA 2CQ8A 2GDXA 2KOQA 2LOLA 2MY5A 1KLPA 2KOSA 4BPFA 2EHTA 2MD9A 5KP7B 2MVUA 4R0MA 2K0XA 4BPHA 5HV8A 2N50A 2KWLA 2FVEA 1HQBA 2X2BA 2KW2A 2LIWA 2LMLA 2MR7A 3CE7A 2K93A 2K92A 2K2QA 2DNWA 4DG9A 2L4BA 4NEOA 2EHSA 2L9FA 2KGAA 2MF4A 5KP8B 2KG9A 2AFEA 2KOPA 4IZ6A 1DV5A 1L0IA 2LKIA 2LIUA 2FQ2A 2KGEA
chains in the Genus database with same CATH superfamily
2VLQA 1UJZA 2E1MA 4IPYA 1VQMP 2AFDA 1RNIA 2EG5A 1HY8A 2Z45A 4U0EA 3G4SP 2OTLP 4GR6A 1K9MQ 2N98A 2CGQA 2MR8A 4XFZA 1X3OA 1VQ8P 1E6JP 3RG2A 2K0DX 1F80D 2KG6A 4XFXA 1EOQA 1A43A 2LTEA 4H2WC 5HGOA 2N6YA 2FVFA 2VLOA 1ACPA 2KODA 4U0CA 3GKLC 1DNYA 2KOOA 1VQ9P 1VQLP 4U0DA 1YJ9P 3CCVP 3Q20A 2LOLA 1KLPA 2Z44A 4BPFA 1N8RQ 3G28A 2MD9A 2PEKA 4R0MA 5HV8A 2PEMA 1JJ2O 1HQBA 2P9XA 2EFJA 3OW2O 3CCSP 2K2QA 2GZJA 5HGLA 2DNWA 2PEJA 3LRYA 4M0IA 2L4BA 1VQ4P 5F2OA 4NEOA 5F2NA 1VHNA 2NO8A 5KP8B 2AFEA 5BS1A 3DS5A 3I55P 3CCJP 2JAZA 1KQSO 4F37A 1D1DA 1ZNVA 2LKIA 3CCMP 2GDYA 2MVVA 2M8PA 2BUOA 2JU2A 2VLNA 2ONTA 2GZGA 2PEQA 4CA3A 1YITP 1L0HA 4PH0A 1Q7YQ 3DS2A 1EIAA 3B5IA 1ZMBA 5HGNA 3CPWO 3H0DA 2PNGA 4UHPB 1VQOP 2VSQA 2ROQA 5CZDB 2PY8A 2XZ0D 1BAJA 3DS0A 2ERHA 1AUMA 2FACA 1RO2A 2K0YA 1IMPA 2LL8A 2OTJP 4GR2A 2CG5B 4WYMA 2JB0A 1VQNP 1MZ8A 4QKOA 1NQ4A 2PEIA 1GXGA 2FQ0A 3VRLC 2K94A 2N5HA 3HYBA 2CQ8A 3G1IA 2GDXA 5EW5E 3CMEP 2K0XA 2N50A 2LF4A 2FVEA 2KW2A 2LIWA 1Z6MA 2K93A 1AYIA 2K92A 2Z46A 1KD1Q 4DG9A 1Q82Q 3U43A 1VQ5P 5DCKA 2KOPA 2WPTA 3CC2P 4BPGA 1M6NA 2CNRA 1M74A 2XZ1C 2XV6A 1EMVA 3DS1A 5JPAA 1M6EX 2N6ZA 1Q81Q 1YI2P 2KGDA 3EJDA 2QNWA 4H2YC 5EJDA 1VQ7P 3GJNA 3DPHA 3CCLP 1K73Q 2JGPA 4XRQA 2KGCA 4U0AA 2JQ4A 2OARA 2FQ1A 4QNBA 1QVFO 2GYKA 2L0QA 1YHQP 1VKUA 3EJEA 3CMAP 3CXCO 3G21A 2FHSC 3EJBA 5HGMA 1YJNP 1IMQA 2AVAA 1NJIQ 4H2XC 4COPA 3G6EP 2XT1A 1GXHA 4PWVB 4PXHB 2FADA 2LPKA 3G0VA 1T8KA 3GZMA 2KORA 2CWOA 2KOQA 2MY5A 1UNKA 2KOSA 1A8OA 1FR2A 1VQKP 2MVUA 2QA4P 1M90Q 3RG6C 3CCEP 3NTEA 2M8LA 2X2BA 1E0HA 3CE7A 1CEIA 1IUQA 1GPJA 2K5XA 3H47A 2L9FA 2KG9A 1YJWP 1DV5A 4COCA 2XXMA 2FQ2A 3CCUP 4MRTC 2GZEA 2FVAA 2KG8A 1QVGO 2N5IA 3NY7B 2JBGA 4PH1A 5KP6B 2JO0A 2QEXP 1K30A 2EIAA 1KC8Q 3HZQA 3MGEA 2GDWA 3E2DA 3LMOA 2PENA 1QRJA 2FAEA 2KR5A 1BXIA 1OR5A 4U0FA 7CEIA 3B4QA 3CC4P 3GZLA 1YIJP 5HVCA 1W2BO 2GZFA 4XFYA 3G29A 1RO0A 3G1GA 3DS4A 2M5RA 1Q86Q 2PEOA 2L22A 2L6EA 2AF8A 1S72P 1AF8A 2JU1A 4HKGA 5BS2A 2M8NA 3I56P 2DGYA 3M1MA 3DTJA 5I4TG 3CCRP 3H4EA 3CD6P 2EHTA 3G26A 1VQ6P 5KP7B 4BPHA 1K8AQ 4XROA 2BHVA 2KWLA 3CCQP 1VQPP 2LMLA 2MR7A 2JYGA 1M1KQ 3CC7P 5F2KA 4U0BA 2EHSA 3WBHA 2MF4A 2KGAA 3P05A 3G71P 3DS3A 2GZIA 4IZ6A 1L0IA 2JYLA 2LIUA 2VLPA 2KGEA
chains in the Genus database with same CATH topology
2GDYA 2MVVA 4MRTC 4BPGA 2CNRA 2JU2A 2XZ1C 2FVAA 2KG8A 2N5IA 3NY7B 5KP6B 2AFDA 2N6ZA 2KGDA 3EJDA 4CA3A 1L0HA 2QNWA 1HY8A 4H2YC 2GDWA 3LMOA 5EJDA 2FAEA 2KR5A 1OR5A 2JGPA 2KGCA 2N98A 3GZLA 2PNGA 2VSQA 2JQ4A 2CGQA 2MR8A 2ROQA 5CZDB 1X3OA 2FQ1A 2XZ0D 5HVCA 3RG2A 1F80D 2L0QA 1VKUA 3EJEA 2FACA 2K0YA 2KG6A 2LTEA 2FHSC 3EJBA 2M5RA 2AVAA 2LL8A 4H2WC 2L22A 2AF8A 4H2XC 2N6YA 2CG5B 2FVFA 4PWVB 4PXHB 1ACPA 2JU1A 1AF8A 1NQ4A 2FADA 2LPKA 4HKGA 1DNYA 1T8KA 2FQ0A 2KOOA 3GZMA 2K94A 2N5HA 2KORA 2CQ8A 2GDXA 2KOQA 2LOLA 2MY5A 1KLPA 2KOSA 4BPFA 2EHTA 2MD9A 5KP7B 2MVUA 4R0MA 2K0XA 4BPHA 5HV8A 2N50A 2KWLA 2FVEA 1HQBA 2X2BA 2KW2A 2LIWA 2LMLA 2MR7A 3CE7A 2K93A 2K92A 2K2QA 2DNWA 4DG9A 2L4BA 4NEOA 2EHSA 2L9FA 2KGAA 2MF4A 5KP8B 2KG9A 2AFEA 2KOPA 4IZ6A 1DV5A 1L0IA 2LKIA 2LIUA 2FQ2A 2KGEA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2GDY A;  2MVV A;  4MRT C;  4BPG A;  2CNR A;  2JU2 A;  2XZ1 C;  2FVA A;  2KG8 A;  2N5I A;  3NY7 B;  5KP6 B;  2AFD A;  2N6Z A;  2KGD A;  3EJD A;  4CA3 A;  1L0H A;  2QNW A;  1HY8 A;  4H2Y C;  2GDW A;  3LMO A;  5EJD A;  2FAE A;  2KR5 A;  1OR5 A;  2JGP A;  2KGC A;  2N98 A;  3GZL A;  2PNG A;  2VSQ A;  2JQ4 A;  2CGQ A;  2MR8 A;  2ROQ A;  5CZD B;  1X3O A;  2FQ1 A;  2XZ0 D;  5HVC A;  3RG2 A;  1F80 D;  2L0Q A;  1VKU A;  3EJE A;  2FAC A;  2K0Y A;  2KG6 A;  2LTE A;  2FHS C;  3EJB A;  2M5R A;  2AVA A;  2LL8 A;  4H2W C;  2L22 A;  2AF8 A;  4H2X C;  2N6Y A;  2CG5 B;  2FVF A;  4PWV B;  4PXH B;  1ACP A;  2JU1 A;  1AF8 A;  1NQ4 A;  2FAD A;  2LPK A;  4HKG A;  1DNY A;  1T8K A;  2FQ0 A;  2KOO A;  3GZM A;  2K94 A;  2N5H A;  2KOR A;  2CQ8 A;  2GDX A;  2KOQ A;  2LOL A;  2MY5 A;  1KLP A;  2KOS A;  4BPF A;  2EHT A;  2MD9 A;  5KP7 B;  2MVU A;  4R0M A;  2K0X A;  4BPH A;  5HV8 A;  2N50 A;  2KWL A;  2FVE A;  1HQB A;  2X2B A;  2KW2 A;  2LIW A;  2LML A;  2MR7 A;  3CE7 A;  2K93 A;  2K92 A;  2K2Q A;  2DNW A;  4DG9 A;  2L4B A;  4NEO A;  2EHS A;  2L9F A;  2KGA A;  2MF4 A;  5KP8 B;  2KG9 A;  2AFE A;  2KOP A;  4IZ6 A;  1DV5 A;  1L0I A;  2LKI A;  2LIU A;  2FQ2 A;  2KGE A; 
#chains in the Genus database with same CATH topology
 2VLQ A;  1UJZ A;  2E1M A;  4IPY A;  1VQM P;  2AFD A;  1RNI A;  2EG5 A;  1HY8 A;  2Z45 A;  4U0E A;  3G4S P;  2OTL P;  4GR6 A;  1K9M Q;  2N98 A;  2CGQ A;  2MR8 A;  4XFZ A;  1X3O A;  1VQ8 P;  1E6J P;  3RG2 A;  2K0D X;  1F80 D;  2KG6 A;  4XFX A;  1EOQ A;  1A43 A;  2LTE A;  4H2W C;  5HGO A;  2N6Y A;  2FVF A;  2VLO A;  1ACP A;  2KOD A;  4U0C A;  3GKL C;  1DNY A;  2KOO A;  1VQ9 P;  1VQL P;  4U0D A;  1YJ9 P;  3CCV P;  3Q20 A;  2LOL A;  1KLP A;  2Z44 A;  4BPF A;  1N8R Q;  3G28 A;  2MD9 A;  2PEK A;  4R0M A;  5HV8 A;  2PEM A;  1JJ2 O;  1HQB A;  2P9X A;  2EFJ A;  3OW2 O;  3CCS P;  2K2Q A;  2GZJ A;  5HGL A;  2DNW A;  2PEJ A;  3LRY A;  4M0I A;  2L4B A;  1VQ4 P;  5F2O A;  4NEO A;  5F2N A;  1VHN A;  2NO8 A;  5KP8 B;  2AFE A;  5BS1 A;  3DS5 A;  3I55 P;  3CCJ P;  2JAZ A;  1KQS O;  4F37 A;  1D1D A;  1ZNV A;  2LKI A;  3CCM P;  2GDY A;  2MVV A;  2M8P A;  2BUO A;  2JU2 A;  2VLN A;  2ONT A;  2GZG A;  2PEQ A;  4CA3 A;  1YIT P;  1L0H A;  4PH0 A;  1Q7Y Q;  3DS2 A;  1EIA A;  3B5I A;  1ZMB A;  5HGN A;  3CPW O;  3H0D A;  2PNG A;  4UHP B;  1VQO P;  2VSQ A;  2ROQ A;  5CZD B;  2PY8 A;  2XZ0 D;  1BAJ A;  3DS0 A;  2ERH A;  1AUM A;  2FAC A;  1RO2 A;  2K0Y A;  1IMP A;  2LL8 A;  2OTJ P;  4GR2 A;  2CG5 B;  4WYM A;  2JB0 A;  1VQN P;  1MZ8 A;  4QKO A;  1NQ4 A;  2PEI A;  1GXG A;  2FQ0 A;  3VRL C;  2K94 A;  2N5H A;  3HYB A;  2CQ8 A;  3G1I A;  2GDX A;  5EW5 E;  3CME P;  2K0X A;  2N50 A;  2LF4 A;  2FVE A;  2KW2 A;  2LIW A;  1Z6M A;  2K93 A;  1AYI A;  2K92 A;  2Z46 A;  1KD1 Q;  4DG9 A;  1Q82 Q;  3U43 A;  1VQ5 P;  5DCK A;  2KOP A;  2WPT A;  3CC2 P;  4BPG A;  1M6N A;  2CNR A;  1M74 A;  2XZ1 C;  2XV6 A;  1EMV A;  3DS1 A;  5JPA A;  1M6E X;  2N6Z A;  1Q81 Q;  1YI2 P;  2KGD A;  3EJD A;  2QNW A;  4H2Y C;  5EJD A;  1VQ7 P;  3GJN A;  3DPH A;  3CCL P;  1K73 Q;  2JGP A;  4XRQ A;  2KGC A;  4U0A A;  2JQ4 A;  2OAR A;  2FQ1 A;  4QNB A;  1QVF O;  2GYK A;  2L0Q A;  1YHQ P;  1VKU A;  3EJE A;  3CMA P;  3CXC O;  3G21 A;  2FHS C;  3EJB A;  5HGM A;  1YJN P;  1IMQ A;  2AVA A;  1NJI Q;  4H2X C;  4COP A;  3G6E P;  2XT1 A;  1GXH A;  4PWV B;  4PXH B;  2FAD A;  2LPK A;  3G0V A;  1T8K A;  3GZM A;  2KOR A;  2CWO A;  2KOQ A;  2MY5 A;  1UNK A;  2KOS A;  1A8O A;  1FR2 A;  1VQK P;  2MVU A;  2QA4 P;  1M90 Q;  3RG6 C;  3CCE P;  3NTE A;  2M8L A;  2X2B A;  1E0H A;  3CE7 A;  1CEI A;  1IUQ A;  1GPJ A;  2K5X A;  3H47 A;  2L9F A;  2KG9 A;  1YJW P;  1DV5 A;  4COC A;  2XXM A;  2FQ2 A;  3CCU P;  4MRT C;  2GZE A;  2FVA A;  2KG8 A;  1QVG O;  2N5I A;  3NY7 B;  2JBG A;  4PH1 A;  5KP6 B;  2JO0 A;  2QEX P;  1K30 A;  2EIA A;  1KC8 Q;  3HZQ A;  3MGE A;  2GDW A;  3E2D A;  3LMO A;  2PEN A;  1QRJ A;  2FAE A;  2KR5 A;  1BXI A;  1OR5 A;  4U0F A;  7CEI A;  3B4Q A;  3CC4 P;  3GZL A;  1YIJ P;  5HVC A;  1W2B O;  2GZF A;  4XFY A;  3G29 A;  1RO0 A;  3G1G A;  3DS4 A;  2M5R A;  1Q86 Q;  2PEO A;  2L22 A;  2L6E A;  2AF8 A;  1S72 P;  1AF8 A;  2JU1 A;  4HKG A;  5BS2 A;  2M8N A;  3I56 P;  2DGY A;  3M1M A;  3DTJ A;  5I4T G;  3CCR P;  3H4E A;  3CD6 P;  2EHT A;  3G26 A;  1VQ6 P;  5KP7 B;  4BPH A;  1K8A Q;  4XRO A;  2BHV A;  2KWL A;  3CCQ P;  1VQP P;  2LML A;  2MR7 A;  2JYG A;  1M1K Q;  3CC7 P;  5F2K A;  4U0B A;  2EHS A;  3WBH A;  2MF4 A;  2KGA A;  3P05 A;  3G71 P;  3DS3 A;  2GZI A;  4IZ6 A;  1L0I A;  2JYL A;  2LIU A;  2VLP A;  2KGE A; 
#chains in the Genus database with same CATH homology
 2GDY A;  2MVV A;  4MRT C;  4BPG A;  2CNR A;  2JU2 A;  2XZ1 C;  2FVA A;  2KG8 A;  2N5I A;  3NY7 B;  5KP6 B;  2AFD A;  2N6Z A;  2KGD A;  3EJD A;  4CA3 A;  1L0H A;  2QNW A;  1HY8 A;  4H2Y C;  2GDW A;  3LMO A;  5EJD A;  2FAE A;  2KR5 A;  1OR5 A;  2JGP A;  2KGC A;  2N98 A;  3GZL A;  2PNG A;  2VSQ A;  2JQ4 A;  2CGQ A;  2MR8 A;  2ROQ A;  5CZD B;  1X3O A;  2FQ1 A;  2XZ0 D;  5HVC A;  3RG2 A;  1F80 D;  2L0Q A;  1VKU A;  3EJE A;  2FAC A;  2K0Y A;  2KG6 A;  2LTE A;  2FHS C;  3EJB A;  2M5R A;  2AVA A;  2LL8 A;  4H2W C;  2L22 A;  2AF8 A;  4H2X C;  2N6Y A;  2CG5 B;  2FVF A;  4PWV B;  4PXH B;  1ACP A;  2JU1 A;  1AF8 A;  1NQ4 A;  2FAD A;  2LPK A;  4HKG A;  1DNY A;  1T8K A;  2FQ0 A;  2KOO A;  3GZM A;  2K94 A;  2N5H A;  2KOR A;  2CQ8 A;  2GDX A;  2KOQ A;  2LOL A;  2MY5 A;  1KLP A;  2KOS A;  4BPF A;  2EHT A;  2MD9 A;  5KP7 B;  2MVU A;  4R0M A;  2K0X A;  4BPH A;  5HV8 A;  2N50 A;  2KWL A;  2FVE A;  1HQB A;  2X2B A;  2KW2 A;  2LIW A;  2LML A;  2MR7 A;  3CE7 A;  2K93 A;  2K92 A;  2K2Q A;  2DNW A;  4DG9 A;  2L4B A;  4NEO A;  2EHS A;  2L9F A;  2KGA A;  2MF4 A;  5KP8 B;  2KG9 A;  2AFE A;  2KOP A;  4IZ6 A;  1DV5 A;  1L0I A;  2LKI A;  2LIU A;  2FQ2 A;  2KGE A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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