1VKUA

Crystal structure of acyl carrier protein (tm0175) from thermotoga maritima at 2.00 a resolution
Total Genus 27
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
27
sequence length
85
structure length
85
Chain Sequence
b'HHHMERKKLIAKFVEIASEKMGKDLETVDEENTFKELGFDSIDVIDLVMFFEDEFALRIEDEEISKIRKVKDLIDIVIKKLEEID'
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule keywords acyl carrier protein
publication title Crystal structure of Acyl carrier protein (TM0175) from Thermotoga maritima at 2.00 A resolution
rcsb
source organism Thermotoga maritima
molecule tags Biosynthetic protein
total genus 27
structure length 85
sequence length 85
ec nomenclature
pdb deposition date 2004-06-18

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 1vkuA00
3GZLA 2M5RA 4H2YC 4PXHB 2GDXA 2L0QA 2DNWA 2N5IA 2K2QA 2KW2A 2KG6A 4CA3A 2FAEA 3EJDA 2KGCA 2L22A 3EJBA 4DG9A 2LIUA 5EJDA 2AFEA 2AFDA 2LOLA 1F80D 3LMOA 2KGAA 1KLPA 1HQBA 2MVVA 2EHTA 2JQ4A 2KGEA 2FQ2A 2FQ0A 4R0MA 2AVAA 2EHSA 2FVFA 1HY8A 2KOPA 1L0HA 2N5HA 2CG5B 1DNYA 2FADA 2KORA 3NY7B 3CE7A 2K0XA 4MRTC 2MD9A 2KWLA 2MVUA 2LMLA 2KG8A 2JU1A 2PNGA 2GDWA 5HVCA 2L4BA 2JU2A 2QNWA 1OR5A 2CGQA 2FVAA 2K94A 5HV8A 4HKGA 2FQ1A 1ACPA 1L0IA 2K93A 2MR8A 3GZMA 2KOQA 2AF8A 4PWVB 4IZ6A 2KOSA 1X3OA 2FHSC 2XZ0D 1AF8A 1NQ4A 2XZ1C 2LL8A 2MR7A 2K92A 5CZDB 2FVEA 5KP6B 2MY5A 2N50A 4NEOA 3EJEA 2CNRA 4BPHA 4BPGA 2CQ8A 2FACA 2N6ZA 2N6YA 2X2BA 1VKUA 2JGPA 4H2WC 2VSQA 5KP7B 2LTEA 3RG2A 2LPKA 2GDYA 2KOOA 2LKIA 2KGDA 2ROQA 5KP8B 2LIWA 2N98A 4H2XC 2MF4A 2K0YA 2L9FA 1DV5A 2KG9A 2KR5A 4BPFA 1T8KA
chains in the Genus database with same CATH superfamily
4PXHB 1VQ9P 2GDXA 1E0HA 1EMVA 3VRLC 4CA3A 2FAEA 2P9XA 2BHVA 2L22A 5HGNA 5HGOA 2KGEA 3H47A 2JAZA 2EHSA 1HY8A 1E6JP 2CG5B 2GZJA 2KORA 3NY7B 3RG6C 2GZEA 3CCLP 2PNGA 1Z6MA 1Q81Q 3CCRP 3M1MA 3G29A 4U0FA 4COCA 2Z46A 2FVAA 2VLPA 1RO2A 2OTLP 1ACPA 2K93A 2JO0A 1W2BO 2QEXP 2EIAA 1AF8A 3DPHA 3CCMP 3DS2A 1M1KQ 2K92A 5CZDB 2M8LA 5KP6B 2N50A 1Q82Q 4M0IA 2K5XA 2CQ8A 2FACA 2PEQA 1VHNA 2N6YA 2VLNA 4PH0A 2LKIA 2CWOA 3CCEP 2LIWA 1VQOP 3G28A 2MF4A 4BPFA 2XV6A 3GZLA 3H4EA 5F2NA 3CMAP 2M5RA 1VQ5P 1K30A 2Z45A 2K2QA 1K9MQ 2M8PA 2QA4P 3G0VA 1KD1Q 5BS2A 3CC4P 3I55P 2AFEA 4XRQA 3DS3A 2K0DX 2FQ2A 2PEJA 2FQ0A 5HGLA 2FVFA 1L0HA 1UJZA 1GXHA 3P05A 2EFJA 3B4QA 3CD6P 2K0XA 2PEMA 3DS4A 1CEIA 1VQ7P 2MVUA 1GXGA 2ONTA 1VQMP 5DCKA 3CCSP 3DS5A 1BXIA 1VQ6P 1BAJA 5F2OA 1UNKA 2XZ0D 1YIJP 3G71P 2XZ1C 5I4TG 3HZQA 2MY5A 4GR6A 3NTEA 1ZMBA 1IMQA 3H0DA 4BPGA 2M8NA 3OW2O 2LF4A 1VKUA 4GR2A 1KQSO 1AUMA 2LTEA 1K8AQ 3RG2A 3G1IA 1VQKP 4H2XC 2OTJP 1RNIA 1DV5A 2KR5A 1QVGO 2JBGA 3LRYA 1T8KA 2L6EA 1Q86Q 4XFXA 2NO8A 2L0QA 3CCJP 1GPJA 3E2DA 1D1DA 3HYBA 3EJDA 2KGCA 1QVFO 4DG9A 5EJDA 1YJNP 3LMOA 1F80D 3GJNA 2KGAA 1KLPA 1HQBA 2MVVA 2XT1A 2JQ4A 4R0MA 5EW5E 2AVAA 1M6EX 4XROA 3G26A 1NJIQ 1M74A 2N5HA 2JB0A 1N8RQ 1EIAA 2JYGA 3CE7A 3CPWO 4XFYA 2E1MA 2PENA 2VLOA 2MD9A 1VQPP 2KWLA 2ERHA 4IPYA 7CEIA 2JU1A 4XFZA 5HVCA 3CCUP 2JU2A 4COPA 3CMEP 1OR5A 2CGQA 1EOQA 5HV8A 2K94A 3GZMA 2MR8A 1M6NA 4PWVB 1YI2P 2Z44A 1NQ4A 2OARA 2LL8A 3WBHA 1IMPA 3U43A 2DGYA 3EJEA 3G6EP 2CNRA 4BPHA 1VQ4P 1A43A 1FR2A 2PEKA 2VLQA 2GZIA 2WPTA 2LPKA 3CC7P 2GDYA 2ROQA 2N98A 2K0YA 1IUQA 4UHPB 4H2YC 1ZNVA 2JYLA 2DNWA 2N5IA 2KW2A 5F2KA 2KG6A 1YJWP 3CC2P 1K73Q 3DS0A 3EJBA 2LIUA 2AFDA 2LOLA 3GKLC 2EHTA 1M90Q 3G4SP 1VQNP 3DTJA 1AYIA 1Q7YQ 2KOPA 1MZ8A 5JPAA 3CXCO 1DNYA 1S72P 2FADA 3G1GA 4QKOA 4MRTC 2PY8A 4U0AA 2GYKA 1KC8Q 2GZFA 1YITP 4U0CA 1QRJA 2EG5A 2LMLA 2KG8A 2GDWA 2L4BA 1A8OA 2QNWA 4PH1A 5BS1A 4HKGA 2FQ1A 3MGEA 1L0IA 2PEIA 2KOQA 4QNBA 1VQ8P 4F37A 2AF8A 4IZ6A 2KOSA 1X3OA 2FHSC 2XXMA 4U0EA 3Q20A 2MR7A 3I56P 1YJ9P 3CCQP 2FVEA 5HGMA 3B5IA 4NEOA 3CCVP 1VQLP 4U0DA 3DS1A 1JJ2O 2BUOA 2GZGA 1YHQP 2PEOA 2N6ZA 4WYMA 2X2BA 2JGPA 4H2WC 2VSQA 5KP7B 1RO0A 2KOOA 2KGDA 5KP8B 3G21A 2L9FA 2KG9A 4U0BA 2KODA
chains in the Genus database with same CATH topology
3GZLA 2M5RA 4H2YC 4PXHB 2GDXA 2L0QA 2DNWA 2N5IA 2K2QA 2KW2A 2KG6A 4CA3A 2FAEA 3EJDA 2KGCA 2L22A 3EJBA 4DG9A 2LIUA 5EJDA 2AFEA 2AFDA 2LOLA 1F80D 3LMOA 2KGAA 1KLPA 1HQBA 2MVVA 2EHTA 2JQ4A 2KGEA 2FQ2A 2FQ0A 4R0MA 2AVAA 2EHSA 2FVFA 1HY8A 2KOPA 1L0HA 2N5HA 2CG5B 1DNYA 2FADA 2KORA 3NY7B 3CE7A 2K0XA 4MRTC 2MD9A 2KWLA 2MVUA 2LMLA 2KG8A 2JU1A 2PNGA 2GDWA 5HVCA 2L4BA 2JU2A 2QNWA 1OR5A 2CGQA 2FVAA 2K94A 5HV8A 4HKGA 2FQ1A 1ACPA 1L0IA 2K93A 2MR8A 3GZMA 2KOQA 2AF8A 4PWVB 4IZ6A 2KOSA 1X3OA 2FHSC 2XZ0D 1AF8A 1NQ4A 2XZ1C 2LL8A 2MR7A 2K92A 5CZDB 2FVEA 5KP6B 2MY5A 2N50A 4NEOA 3EJEA 2CNRA 4BPHA 4BPGA 2CQ8A 2FACA 2N6ZA 2N6YA 2X2BA 1VKUA 2JGPA 4H2WC 2VSQA 5KP7B 2LTEA 3RG2A 2LPKA 2GDYA 2KOOA 2LKIA 2KGDA 2ROQA 5KP8B 2LIWA 2N98A 4H2XC 2MF4A 2K0YA 2L9FA 1DV5A 2KG9A 2KR5A 4BPFA 1T8KA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3GZL A;  2M5R A;  4H2Y C;  4PXH B;  2GDX A;  2L0Q A;  2DNW A;  2N5I A;  2K2Q A;  2KW2 A;  2KG6 A;  4CA3 A;  2FAE A;  3EJD A;  2KGC A;  2L22 A;  3EJB A;  4DG9 A;  2LIU A;  5EJD A;  2AFE A;  2AFD A;  2LOL A;  1F80 D;  3LMO A;  2KGA A;  1KLP A;  1HQB A;  2MVV A;  2EHT A;  2JQ4 A;  2KGE A;  2FQ2 A;  2FQ0 A;  4R0M A;  2AVA A;  2EHS A;  2FVF A;  1HY8 A;  2KOP A;  1L0H A;  2N5H A;  2CG5 B;  1DNY A;  2FAD A;  2KOR A;  3NY7 B;  3CE7 A;  2K0X A;  4MRT C;  2MD9 A;  2KWL A;  2MVU A;  2LML A;  2KG8 A;  2JU1 A;  2PNG A;  2GDW A;  5HVC A;  2L4B A;  2JU2 A;  2QNW A;  1OR5 A;  2CGQ A;  2FVA A;  2K94 A;  5HV8 A;  4HKG A;  2FQ1 A;  1ACP A;  1L0I A;  2K93 A;  2MR8 A;  3GZM A;  2KOQ A;  2AF8 A;  4PWV B;  4IZ6 A;  2KOS A;  1X3O A;  2FHS C;  2XZ0 D;  1AF8 A;  1NQ4 A;  2XZ1 C;  2LL8 A;  2MR7 A;  2K92 A;  5CZD B;  2FVE A;  5KP6 B;  2MY5 A;  2N50 A;  4NEO A;  3EJE A;  2CNR A;  4BPH A;  4BPG A;  2CQ8 A;  2FAC A;  2N6Z A;  2N6Y A;  2X2B A;  1VKU A;  2JGP A;  4H2W C;  2VSQ A;  5KP7 B;  2LTE A;  3RG2 A;  2LPK A;  2GDY A;  2KOO A;  2LKI A;  2KGD A;  2ROQ A;  5KP8 B;  2LIW A;  2N98 A;  4H2X C;  2MF4 A;  2K0Y A;  2L9F A;  1DV5 A;  2KG9 A;  2KR5 A;  4BPF A;  1T8K A; 
#chains in the Genus database with same CATH topology
 4PXH B;  1VQ9 P;  2GDX A;  1E0H A;  1EMV A;  3VRL C;  4CA3 A;  2FAE A;  2P9X A;  2BHV A;  2L22 A;  5HGN A;  5HGO A;  2KGE A;  3H47 A;  2JAZ A;  2EHS A;  1HY8 A;  1E6J P;  2CG5 B;  2GZJ A;  2KOR A;  3NY7 B;  3RG6 C;  2GZE A;  3CCL P;  2PNG A;  1Z6M A;  1Q81 Q;  3CCR P;  3M1M A;  3G29 A;  4U0F A;  4COC A;  2Z46 A;  2FVA A;  2VLP A;  1RO2 A;  2OTL P;  1ACP A;  2K93 A;  2JO0 A;  1W2B O;  2QEX P;  2EIA A;  1AF8 A;  3DPH A;  3CCM P;  3DS2 A;  1M1K Q;  2K92 A;  5CZD B;  2M8L A;  5KP6 B;  2N50 A;  1Q82 Q;  4M0I A;  2K5X A;  2CQ8 A;  2FAC A;  2PEQ A;  1VHN A;  2N6Y A;  2VLN A;  4PH0 A;  2LKI A;  2CWO A;  3CCE P;  2LIW A;  1VQO P;  3G28 A;  2MF4 A;  4BPF A;  2XV6 A;  3GZL A;  3H4E A;  5F2N A;  3CMA P;  2M5R A;  1VQ5 P;  1K30 A;  2Z45 A;  2K2Q A;  1K9M Q;  2M8P A;  2QA4 P;  3G0V A;  1KD1 Q;  5BS2 A;  3CC4 P;  3I55 P;  2AFE A;  4XRQ A;  3DS3 A;  2K0D X;  2FQ2 A;  2PEJ A;  2FQ0 A;  5HGL A;  2FVF A;  1L0H A;  1UJZ A;  1GXH A;  3P05 A;  2EFJ A;  3B4Q A;  3CD6 P;  2K0X A;  2PEM A;  3DS4 A;  1CEI A;  1VQ7 P;  2MVU A;  1GXG A;  2ONT A;  1VQM P;  5DCK A;  3CCS P;  3DS5 A;  1BXI A;  1VQ6 P;  1BAJ A;  5F2O A;  1UNK A;  2XZ0 D;  1YIJ P;  3G71 P;  2XZ1 C;  5I4T G;  3HZQ A;  2MY5 A;  4GR6 A;  3NTE A;  1ZMB A;  1IMQ A;  3H0D A;  4BPG A;  2M8N A;  3OW2 O;  2LF4 A;  1VKU A;  4GR2 A;  1KQS O;  1AUM A;  2LTE A;  1K8A Q;  3RG2 A;  3G1I A;  1VQK P;  4H2X C;  2OTJ P;  1RNI A;  1DV5 A;  2KR5 A;  1QVG O;  2JBG A;  3LRY A;  1T8K A;  2L6E A;  1Q86 Q;  4XFX A;  2NO8 A;  2L0Q A;  3CCJ P;  1GPJ A;  3E2D A;  1D1D A;  3HYB A;  3EJD A;  2KGC A;  1QVF O;  4DG9 A;  5EJD A;  1YJN P;  3LMO A;  1F80 D;  3GJN A;  2KGA A;  1KLP A;  1HQB A;  2MVV A;  2XT1 A;  2JQ4 A;  4R0M A;  5EW5 E;  2AVA A;  1M6E X;  4XRO A;  3G26 A;  1NJI Q;  1M74 A;  2N5H A;  2JB0 A;  1N8R Q;  1EIA A;  2JYG A;  3CE7 A;  3CPW O;  4XFY A;  2E1M A;  2PEN A;  2VLO A;  2MD9 A;  1VQP P;  2KWL A;  2ERH A;  4IPY A;  7CEI A;  2JU1 A;  4XFZ A;  5HVC A;  3CCU P;  2JU2 A;  4COP A;  3CME P;  1OR5 A;  2CGQ A;  1EOQ A;  5HV8 A;  2K94 A;  3GZM A;  2MR8 A;  1M6N A;  4PWV B;  1YI2 P;  2Z44 A;  1NQ4 A;  2OAR A;  2LL8 A;  3WBH A;  1IMP A;  3U43 A;  2DGY A;  3EJE A;  3G6E P;  2CNR A;  4BPH A;  1VQ4 P;  1A43 A;  1FR2 A;  2PEK A;  2VLQ A;  2GZI A;  2WPT A;  2LPK A;  3CC7 P;  2GDY A;  2ROQ A;  2N98 A;  2K0Y A;  1IUQ A;  4UHP B;  4H2Y C;  1ZNV A;  2JYL A;  2DNW A;  2N5I A;  2KW2 A;  5F2K A;  2KG6 A;  1YJW P;  3CC2 P;  1K73 Q;  3DS0 A;  3EJB A;  2LIU A;  2AFD A;  2LOL A;  3GKL C;  2EHT A;  1M90 Q;  3G4S P;  1VQN P;  3DTJ A;  1AYI A;  1Q7Y Q;  2KOP A;  1MZ8 A;  5JPA A;  3CXC O;  1DNY A;  1S72 P;  2FAD A;  3G1G A;  4QKO A;  4MRT C;  2PY8 A;  4U0A A;  2GYK A;  1KC8 Q;  2GZF A;  1YIT P;  4U0C A;  1QRJ A;  2EG5 A;  2LML A;  2KG8 A;  2GDW A;  2L4B A;  1A8O A;  2QNW A;  4PH1 A;  5BS1 A;  4HKG A;  2FQ1 A;  3MGE A;  1L0I A;  2PEI A;  2KOQ A;  4QNB A;  1VQ8 P;  4F37 A;  2AF8 A;  4IZ6 A;  2KOS A;  1X3O A;  2FHS C;  2XXM A;  4U0E A;  3Q20 A;  2MR7 A;  3I56 P;  1YJ9 P;  3CCQ P;  2FVE A;  5HGM A;  3B5I A;  4NEO A;  3CCV P;  1VQL P;  4U0D A;  3DS1 A;  1JJ2 O;  2BUO A;  2GZG A;  1YHQ P;  2PEO A;  2N6Z A;  4WYM A;  2X2B A;  2JGP A;  4H2W C;  2VSQ A;  5KP7 B;  1RO0 A;  2KOO A;  2KGD A;  5KP8 B;  3G21 A;  2L9F A;  2KG9 A;  4U0B A;  2KOD A; 
#chains in the Genus database with same CATH homology
 3GZL A;  2M5R A;  4H2Y C;  4PXH B;  2GDX A;  2L0Q A;  2DNW A;  2N5I A;  2K2Q A;  2KW2 A;  2KG6 A;  4CA3 A;  2FAE A;  3EJD A;  2KGC A;  2L22 A;  3EJB A;  4DG9 A;  2LIU A;  5EJD A;  2AFE A;  2AFD A;  2LOL A;  1F80 D;  3LMO A;  2KGA A;  1KLP A;  1HQB A;  2MVV A;  2EHT A;  2JQ4 A;  2KGE A;  2FQ2 A;  2FQ0 A;  4R0M A;  2AVA A;  2EHS A;  2FVF A;  1HY8 A;  2KOP A;  1L0H A;  2N5H A;  2CG5 B;  1DNY A;  2FAD A;  2KOR A;  3NY7 B;  3CE7 A;  2K0X A;  4MRT C;  2MD9 A;  2KWL A;  2MVU A;  2LML A;  2KG8 A;  2JU1 A;  2PNG A;  2GDW A;  5HVC A;  2L4B A;  2JU2 A;  2QNW A;  1OR5 A;  2CGQ A;  2FVA A;  2K94 A;  5HV8 A;  4HKG A;  2FQ1 A;  1ACP A;  1L0I A;  2K93 A;  2MR8 A;  3GZM A;  2KOQ A;  2AF8 A;  4PWV B;  4IZ6 A;  2KOS A;  1X3O A;  2FHS C;  2XZ0 D;  1AF8 A;  1NQ4 A;  2XZ1 C;  2LL8 A;  2MR7 A;  2K92 A;  5CZD B;  2FVE A;  5KP6 B;  2MY5 A;  2N50 A;  4NEO A;  3EJE A;  2CNR A;  4BPH A;  4BPG A;  2CQ8 A;  2FAC A;  2N6Z A;  2N6Y A;  2X2B A;  1VKU A;  2JGP A;  4H2W C;  2VSQ A;  5KP7 B;  2LTE A;  3RG2 A;  2LPK A;  2GDY A;  2KOO A;  2LKI A;  2KGD A;  2ROQ A;  5KP8 B;  2LIW A;  2N98 A;  4H2X C;  2MF4 A;  2K0Y A;  2L9F A;  1DV5 A;  2KG9 A;  2KR5 A;  4BPF A;  1T8K A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...