1VKUA

Crystal structure of acyl carrier protein (tm0175) from thermotoga maritima at 2.00 a resolution
Total Genus 27
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
27
sequence length
85
structure length
85
Chain Sequence
HHHMERKKLIAKFVEIASEKMGKDLETVDEENTFKELGFDSIDVIDLVMFFEDEFALRIEDEEISKIRKVKDLIDIVIKKLEEID
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords acyl carrier protein
publication title Crystal structure of Acyl carrier protein (TM0175) from Thermotoga maritima at 2.00 A resolution
rcsb
source organism Thermotoga maritima
molecule tags Biosynthetic protein
total genus 27
structure length 85
sequence length 85
ec nomenclature
pdb deposition date 2004-06-18

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 1vkuA00
2K0XA 2XZ1C 1T8KA 1HQBA 2KG8A 3GZLA 2XZ0D 2ROQA 2FVEA 4HKGA 1DNYA 2KWLA 2JU2A 2KW2A 2KOOA 2KGAA 1L0HA 2MF4A 1KLPA 4MRTC 2M5RA 2KG9A 2KR5A 5CZDB 2L9FA 2MVVA 3RG2A 4BPFA 2K0YA 2K92A 2JQ4A 4CA3A 2AFEA 2LTEA 2KOSA 2CG5B 2JU1A 2JGPA 2FADA 1HY8A 2LOLA 2FHSC 2GDYA 2MR8A 2GDXA 2L4BA 2KORA 2L22A 2K94A 3GZMA 3LMOA 1NQ4A 2QNWA 2LKIA 2K93A 5KP6B 4H2YC 4NEOA 2GDWA 2N6ZA 2VSQA 4H2XC 4BPHA 2AVAA 2KGDA 2N5IA 2KOPA 2FQ2A 2FVAA 2AF8A 2MY5A 3NY7B 2FAEA 1ACPA 3EJDA 2FQ0A 4BPGA 4PWVB 3CE7A 3EJEA 5HVCA 2AFDA 3EJBA 2X2BA 5KP7B 2LL8A 5HV8A 1AF8A 1DV5A 4DG9A 1F80D 2MR7A 4IZ6A 2LIUA 2N6YA 2CNRA 2N50A 2EHTA 4H2WC 2N5HA 2LPKA 2KG6A 5KP8B 1X3OA 2CQ8A 2KGCA 2L0QA 2EHSA 2LIWA 2LMLA 2N98A 4PXHB 2KOQA 2PNGA 1L0IA 1OR5A 2K2QA 5EJDA 2CGQA 2FVFA 2DNWA 2FQ1A 4R0MA 2MVUA 2MD9A 2FACA 2KGEA 1VKUA
chains in the Genus database with same CATH superfamily
2XZ1C 2XT1A 2ONTA 5BS1A 1DNYA 2JU2A 2M8LA 2KOOA 2EFJA 3G6EP 5F2OA 3DS2A 4U0EA 2KG9A 4XROA 2JQ4A 3B5IA 2JU1A 2OARA 2FADA 1UNKA 1VQ7P 1KD1Q 1Q7YQ 1VQ9P 2L4BA 1GPJA 4PH1A 2JAZA 2QNWA 2GDWA 4BPHA 1W2BO 2KOPA 2L6EA 2JYLA 2LF4A 3G29A 1EIAA 4PWVB 1N8RQ 3CE7A 3EJBA 1AF8A 5HV8A 2EIAA 4F37A 4UHPB 3DPHA 2EHTA 2QEXP 2LPKA 2CQ8A 1FR2A 2LIWA 3G21A 2PEJA 4PXHB 3B4QA 5EJDA 2CGQA 3NTEA 1VQPP 4XFXA 4XRQA 1YJNP 2FQ1A 4R0MA 3GKLC 1KQSO 2MVUA 2FACA 1VKUA 5DCKA 2VLPA 3GZLA 1NJIQ 1QVGO 1D1DA 3DS5A 1VQ4P 2NO8A 2MF4A 2P9XA 1KLPA 1VQMP 2OTLP 2M5RA 3HZQA 4U0BA 5CZDB 2MVVA 2Z44A 4BPFA 1GXHA 3CCLP 2K92A 1YHQP 2LTEA 3DS0A 2JGPA 2FHSC 5EW5E 3G1IA 2GDYA 1VQOP 2BUOA 2KORA 3LMOA 2K94A 3CCVP 2LKIA 4NEOA 2VSQA 1RO0A 4U0FA 2AVAA 3H0DA 3CCRP 1IMPA 2PEQA 3DS3A 2AF8A 3RG6C 3CC7P 2MY5A 1A8OA 5I4TG 3G4SP 2FQ0A 3CCSP 3E2DA 3CCJP 2JB0A 1BXIA 1Q86Q 3CMAP 3EJEA 1YJWP 5JPAA 2AFDA 5KP7B 3LRYA 3G26A 2M8PA 3DS1A 2WPTA 1KC8Q 2Z45A 2EHSA 2LMLA 2N98A 1K8AQ 2OTJP 1VQKP 2KOQA 2JO0A 2K2QA 2XV6A 1IMQA 3CXCO 4WYMA 1ZNVA 2K0XA 1YJ9P 1T8KA 1A43A 1HQBA 4M0IA 2BHVA 1K73Q 2ROQA 1VQ5P 4HKGA 1UJZA 2KW2A 2PEOA 2KR5A 2L9FA 1Z6MA 2GZFA 1VQ8P 1CEIA 4CA3A 5HGOA 2JBGA 2LOLA 1M6EX 5HGMA 1YIJP 2MR8A 2GDXA 1M74A 1EMVA 2L22A 1VQNP 7CEIA 2M8NA 2PEKA 1VQLP 1EOQA 3H47A 5KP6B 4H2YC 4XFYA 2N6ZA 2GZGA 1K9MQ 2GZJA 2FQ2A 2FVAA 3NY7B 2K0DX 1Q81Q 1GXGA 5HGLA 2PEMA 4BPGA 1QVFO 3CD6P 3DTJA 3I56P 3OW2O 2JYGA 3HYBA 2GZIA 3G0VA 2X2BA 2LL8A 2VLNA 1DV5A 1F80D 2MR7A 4IZ6A 2E1MA 1E0HA 2CNRA 2N50A 4H2WC 2N5HA 1M1KQ 5KP8B 1X3OA 1BAJA 1ZMBA 3G71P 4XFZA 4COPA 2PNGA 2Z46A 2VLOA 1L0IA 1AUMA 2FVFA 1YITP 3CCEP 3WBHA 2DNWA 3CMEP 2GYKA 1M6NA 4U0DA 2PENA 3CCUP 3P05A 2KG8A 1QRJA 2XZ0D 2FVEA 5BS2A 1IUQA 1E6JP 2KWLA 1M90Q 2KGAA 1L0HA 3CC2P 1VHNA 3M1MA 5F2NA 4MRTC 5HGNA 2ERHA 3RG2A 2K0YA 4U0CA 2AFEA 2KOSA 2CG5B 2K5XA 3G1GA 3CC4P 1HY8A 2GZEA 2KODA 2DGYA 1K30A 2PEIA 3GZMA 3CCQP 1NQ4A 2QA4P 2K93A 1JJ2O 1YI2P 4IPYA 4H2XC 4GR2A 2KGDA 2N5IA 2PY8A 2XXMA 1MZ8A 4PH0A 1VQ6P 3U43A 3VRLC 2FAEA 1ACPA 3EJDA 3CCMP 3MGEA 3Q20A 3GJNA 4GR6A 1RNIA 5HVCA 1RO2A 4DG9A 3G28A 2LIUA 2N6YA 4COCA 2KG6A 3I55P 1Q82Q 2VLQA 2KGCA 2L0QA 4QKOA 5F2KA 4QNBA 2CWOA 1S72P 1OR5A 3H4EA 2EG5A 3CPWO 4U0AA 1AYIA 2MD9A 2KGEA 3DS4A
chains in the Genus database with same CATH topology
2K0XA 2XZ1C 1T8KA 1HQBA 2KG8A 3GZLA 2XZ0D 2ROQA 2FVEA 4HKGA 1DNYA 2KWLA 2JU2A 2KW2A 2KOOA 2KGAA 1L0HA 2MF4A 1KLPA 4MRTC 2M5RA 2KG9A 2KR5A 5CZDB 2L9FA 2MVVA 3RG2A 4BPFA 2K0YA 2K92A 2JQ4A 4CA3A 2AFEA 2LTEA 2KOSA 2CG5B 2JU1A 2JGPA 2FADA 1HY8A 2LOLA 2FHSC 2GDYA 2MR8A 2GDXA 2L4BA 2KORA 2L22A 2K94A 3GZMA 3LMOA 1NQ4A 2QNWA 2LKIA 2K93A 5KP6B 4H2YC 4NEOA 2GDWA 2N6ZA 2VSQA 4H2XC 4BPHA 2AVAA 2KGDA 2N5IA 2KOPA 2FQ2A 2FVAA 2AF8A 2MY5A 3NY7B 2FAEA 1ACPA 3EJDA 2FQ0A 4BPGA 4PWVB 3CE7A 3EJEA 5HVCA 2AFDA 3EJBA 2X2BA 5KP7B 2LL8A 5HV8A 1AF8A 1DV5A 4DG9A 1F80D 2MR7A 4IZ6A 2LIUA 2N6YA 2CNRA 2N50A 2EHTA 4H2WC 2N5HA 2LPKA 2KG6A 5KP8B 1X3OA 2CQ8A 2KGCA 2L0QA 2EHSA 2LIWA 2LMLA 2N98A 4PXHB 2KOQA 2PNGA 1L0IA 1OR5A 2K2QA 5EJDA 2CGQA 2FVFA 2DNWA 2FQ1A 4R0MA 2MVUA 2MD9A 2FACA 2KGEA 1VKUA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2K0X A;  2XZ1 C;  1T8K A;  1HQB A;  2KG8 A;  3GZL A;  2XZ0 D;  2ROQ A;  2FVE A;  4HKG A;  1DNY A;  2KWL A;  2JU2 A;  2KW2 A;  2KOO A;  2KGA A;  1L0H A;  2MF4 A;  1KLP A;  4MRT C;  2M5R A;  2KG9 A;  2KR5 A;  5CZD B;  2L9F A;  2MVV A;  3RG2 A;  4BPF A;  2K0Y A;  2K92 A;  2JQ4 A;  4CA3 A;  2AFE A;  2LTE A;  2KOS A;  2CG5 B;  2JU1 A;  2JGP A;  2FAD A;  1HY8 A;  2LOL A;  2FHS C;  2GDY A;  2MR8 A;  2GDX A;  2L4B A;  2KOR A;  2L22 A;  2K94 A;  3GZM A;  3LMO A;  1NQ4 A;  2QNW A;  2LKI A;  2K93 A;  5KP6 B;  4H2Y C;  4NEO A;  2GDW A;  2N6Z A;  2VSQ A;  4H2X C;  4BPH A;  2AVA A;  2KGD A;  2N5I A;  2KOP A;  2FQ2 A;  2FVA A;  2AF8 A;  2MY5 A;  3NY7 B;  2FAE A;  1ACP A;  3EJD A;  2FQ0 A;  4BPG A;  4PWV B;  3CE7 A;  3EJE A;  5HVC A;  2AFD A;  3EJB A;  2X2B A;  5KP7 B;  2LL8 A;  5HV8 A;  1AF8 A;  1DV5 A;  4DG9 A;  1F80 D;  2MR7 A;  4IZ6 A;  2LIU A;  2N6Y A;  2CNR A;  2N50 A;  2EHT A;  4H2W C;  2N5H A;  2LPK A;  2KG6 A;  5KP8 B;  1X3O A;  2CQ8 A;  2KGC A;  2L0Q A;  2EHS A;  2LIW A;  2LML A;  2N98 A;  4PXH B;  2KOQ A;  2PNG A;  1L0I A;  1OR5 A;  2K2Q A;  5EJD A;  2CGQ A;  2FVF A;  2DNW A;  2FQ1 A;  4R0M A;  2MVU A;  2MD9 A;  2FAC A;  2KGE A;  1VKU A; 
#chains in the Genus database with same CATH topology
 2XZ1 C;  2XT1 A;  2ONT A;  5BS1 A;  1DNY A;  2JU2 A;  2M8L A;  2KOO A;  2EFJ A;  3G6E P;  5F2O A;  3DS2 A;  4U0E A;  2KG9 A;  4XRO A;  2JQ4 A;  3B5I A;  2JU1 A;  2OAR A;  2FAD A;  1UNK A;  1VQ7 P;  1KD1 Q;  1Q7Y Q;  1VQ9 P;  2L4B A;  1GPJ A;  4PH1 A;  2JAZ A;  2QNW A;  2GDW A;  4BPH A;  1W2B O;  2KOP A;  2L6E A;  2JYL A;  2LF4 A;  3G29 A;  1EIA A;  4PWV B;  1N8R Q;  3CE7 A;  3EJB A;  1AF8 A;  5HV8 A;  2EIA A;  4F37 A;  4UHP B;  3DPH A;  2EHT A;  2QEX P;  2LPK A;  2CQ8 A;  1FR2 A;  2LIW A;  3G21 A;  2PEJ A;  4PXH B;  3B4Q A;  5EJD A;  2CGQ A;  3NTE A;  1VQP P;  4XFX A;  4XRQ A;  1YJN P;  2FQ1 A;  4R0M A;  3GKL C;  1KQS O;  2MVU A;  2FAC A;  1VKU A;  5DCK A;  2VLP A;  3GZL A;  1NJI Q;  1QVG O;  1D1D A;  3DS5 A;  1VQ4 P;  2NO8 A;  2MF4 A;  2P9X A;  1KLP A;  1VQM P;  2OTL P;  2M5R A;  3HZQ A;  4U0B A;  5CZD B;  2MVV A;  2Z44 A;  4BPF A;  1GXH A;  3CCL P;  2K92 A;  1YHQ P;  2LTE A;  3DS0 A;  2JGP A;  2FHS C;  5EW5 E;  3G1I A;  2GDY A;  1VQO P;  2BUO A;  2KOR A;  3LMO A;  2K94 A;  3CCV P;  2LKI A;  4NEO A;  2VSQ A;  1RO0 A;  4U0F A;  2AVA A;  3H0D A;  3CCR P;  1IMP A;  2PEQ A;  3DS3 A;  2AF8 A;  3RG6 C;  3CC7 P;  2MY5 A;  1A8O A;  5I4T G;  3G4S P;  2FQ0 A;  3CCS P;  3E2D A;  3CCJ P;  2JB0 A;  1BXI A;  1Q86 Q;  3CMA P;  3EJE A;  1YJW P;  5JPA A;  2AFD A;  5KP7 B;  3LRY A;  3G26 A;  2M8P A;  3DS1 A;  2WPT A;  1KC8 Q;  2Z45 A;  2EHS A;  2LML A;  2N98 A;  1K8A Q;  2OTJ P;  1VQK P;  2KOQ A;  2JO0 A;  2K2Q A;  2XV6 A;  1IMQ A;  3CXC O;  4WYM A;  1ZNV A;  2K0X A;  1YJ9 P;  1T8K A;  1A43 A;  1HQB A;  4M0I A;  2BHV A;  1K73 Q;  2ROQ A;  1VQ5 P;  4HKG A;  1UJZ A;  2KW2 A;  2PEO A;  2KR5 A;  2L9F A;  1Z6M A;  2GZF A;  1VQ8 P;  1CEI A;  4CA3 A;  5HGO A;  2JBG A;  2LOL A;  1M6E X;  5HGM A;  1YIJ P;  2MR8 A;  2GDX A;  1M74 A;  1EMV A;  2L22 A;  1VQN P;  7CEI A;  2M8N A;  2PEK A;  1VQL P;  1EOQ A;  3H47 A;  5KP6 B;  4H2Y C;  4XFY A;  2N6Z A;  2GZG A;  1K9M Q;  2GZJ A;  2FQ2 A;  2FVA A;  3NY7 B;  2K0D X;  1Q81 Q;  1GXG A;  5HGL A;  2PEM A;  4BPG A;  1QVF O;  3CD6 P;  3DTJ A;  3I56 P;  3OW2 O;  2JYG A;  3HYB A;  2GZI A;  3G0V A;  2X2B A;  2LL8 A;  2VLN A;  1DV5 A;  1F80 D;  2MR7 A;  4IZ6 A;  2E1M A;  1E0H A;  2CNR A;  2N50 A;  4H2W C;  2N5H A;  1M1K Q;  5KP8 B;  1X3O A;  1BAJ A;  1ZMB A;  3G71 P;  4XFZ A;  4COP A;  2PNG A;  2Z46 A;  2VLO A;  1L0I A;  1AUM A;  2FVF A;  1YIT P;  3CCE P;  3WBH A;  2DNW A;  3CME P;  2GYK A;  1M6N A;  4U0D A;  2PEN A;  3CCU P;  3P05 A;  2KG8 A;  1QRJ A;  2XZ0 D;  2FVE A;  5BS2 A;  1IUQ A;  1E6J P;  2KWL A;  1M90 Q;  2KGA A;  1L0H A;  3CC2 P;  1VHN A;  3M1M A;  5F2N A;  4MRT C;  5HGN A;  2ERH A;  3RG2 A;  2K0Y A;  4U0C A;  2AFE A;  2KOS A;  2CG5 B;  2K5X A;  3G1G A;  3CC4 P;  1HY8 A;  2GZE A;  2KOD A;  2DGY A;  1K30 A;  2PEI A;  3GZM A;  3CCQ P;  1NQ4 A;  2QA4 P;  2K93 A;  1JJ2 O;  1YI2 P;  4IPY A;  4H2X C;  4GR2 A;  2KGD A;  2N5I A;  2PY8 A;  2XXM A;  1MZ8 A;  4PH0 A;  1VQ6 P;  3U43 A;  3VRL C;  2FAE A;  1ACP A;  3EJD A;  3CCM P;  3MGE A;  3Q20 A;  3GJN A;  4GR6 A;  1RNI A;  5HVC A;  1RO2 A;  4DG9 A;  3G28 A;  2LIU A;  2N6Y A;  4COC A;  2KG6 A;  3I55 P;  1Q82 Q;  2VLQ A;  2KGC A;  2L0Q A;  4QKO A;  5F2K A;  4QNB A;  2CWO A;  1S72 P;  1OR5 A;  3H4E A;  2EG5 A;  3CPW O;  4U0A A;  1AYI A;  2MD9 A;  2KGE A;  3DS4 A; 
#chains in the Genus database with same CATH homology
 2K0X A;  2XZ1 C;  1T8K A;  1HQB A;  2KG8 A;  3GZL A;  2XZ0 D;  2ROQ A;  2FVE A;  4HKG A;  1DNY A;  2KWL A;  2JU2 A;  2KW2 A;  2KOO A;  2KGA A;  1L0H A;  2MF4 A;  1KLP A;  4MRT C;  2M5R A;  2KG9 A;  2KR5 A;  5CZD B;  2L9F A;  2MVV A;  3RG2 A;  4BPF A;  2K0Y A;  2K92 A;  2JQ4 A;  4CA3 A;  2AFE A;  2LTE A;  2KOS A;  2CG5 B;  2JU1 A;  2JGP A;  2FAD A;  1HY8 A;  2LOL A;  2FHS C;  2GDY A;  2MR8 A;  2GDX A;  2L4B A;  2KOR A;  2L22 A;  2K94 A;  3GZM A;  3LMO A;  1NQ4 A;  2QNW A;  2LKI A;  2K93 A;  5KP6 B;  4H2Y C;  4NEO A;  2GDW A;  2N6Z A;  2VSQ A;  4H2X C;  4BPH A;  2AVA A;  2KGD A;  2N5I A;  2KOP A;  2FQ2 A;  2FVA A;  2AF8 A;  2MY5 A;  3NY7 B;  2FAE A;  1ACP A;  3EJD A;  2FQ0 A;  4BPG A;  4PWV B;  3CE7 A;  3EJE A;  5HVC A;  2AFD A;  3EJB A;  2X2B A;  5KP7 B;  2LL8 A;  5HV8 A;  1AF8 A;  1DV5 A;  4DG9 A;  1F80 D;  2MR7 A;  4IZ6 A;  2LIU A;  2N6Y A;  2CNR A;  2N50 A;  2EHT A;  4H2W C;  2N5H A;  2LPK A;  2KG6 A;  5KP8 B;  1X3O A;  2CQ8 A;  2KGC A;  2L0Q A;  2EHS A;  2LIW A;  2LML A;  2N98 A;  4PXH B;  2KOQ A;  2PNG A;  1L0I A;  1OR5 A;  2K2Q A;  5EJD A;  2CGQ A;  2FVF A;  2DNW A;  2FQ1 A;  4R0M A;  2MVU A;  2MD9 A;  2FAC A;  2KGE A;  1VKU A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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