1VKUA

Crystal structure of acyl carrier protein (tm0175) from thermotoga maritima at 2.00 a resolution
Total Genus 27
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
27
sequence length
85
structure length
85
Chain Sequence
HHHMERKKLIAKFVEIASEKMGKDLETVDEENTFKELGFDSIDVIDLVMFFEDEFALRIEDEEISKIRKVKDLIDIVIKKLEEID
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Biosynthetic protein
molecule keywords acyl carrier protein
publication title Crystal structure of Acyl carrier protein (TM0175) from Thermotoga maritima at 2.00 A resolution
rcsb
source organism Thermotoga maritima
total genus 27
structure length 85
sequence length 85
ec nomenclature
pdb deposition date 2004-06-18

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 1vkuA00
2K93A 2FQ0A 3EJEA 2K0XA 4IZ6A 2EHTA 4BPFA 2FVFA 2GDWA 4PWVB 2MY5A 2CNRA 1VKUA 2X2BA 2KW2A 2FHSC 2LKIA 2JGPA 2VSQA 2L9FA 2N50A 2KGAA 2KR5A 1KLPA 2KGCA 2MR8A 1AF8A 2KOOA 2KGDA 2ROQA 3EJDA 2AFDA 2L22A 3CE7A 2FADA 4BPHA 2FQ2A 2PNGA 1L0IA 5EJDA 1OR5A 3NY7B 2JU1A 2LL8A 2MD9A 4R0MA 2K2QA 2K92A 2MF4A 4HKGA 2KG8A 1DV5A 2AVAA 1DNYA 2KOQA 2KOPA 3RG2A 2FQ1A 5CZDB 4NEOA 2GDXA 2LIUA 4H2WC 2JU2A 3LMOA 2CQ8A 2K0YA 2CG5B 5KP8B 2LIWA 1HQBA 5KP6B 2MVUA 2LOLA 2L4BA 1ACPA 4BPGA 2KOSA 2LTEA 4MRTC 2QNWA 2FVEA 2N98A 4DG9A 2LMLA 2K94A 3EJBA 2EHSA 2FAEA 2AFEA 2AF8A 2DNWA 1F80D 2FACA 2LPKA 2KG6A 1HY8A 3GZMA 2N6YA 2GDYA 4H2XC 2N5HA 2KORA 2XZ0D 2XZ1C 1L0HA 2MR7A 2CGQA 2MVVA 5HVCA 2FVAA 2N6ZA 4H2YC 3GZLA 2M5RA 1X3OA 5HV8A 1NQ4A 2KG9A 4CA3A 2KWLA 4PXHB 2JQ4A 2KGEA 1T8KA 2L0QA 2N5IA 5KP7B
chains in the Genus database with same CATH superfamily
3CMAP 4BPFA 2GDWA 4PWVB 1MZ8A 1EIAA 1VKUA 2VLQA 1VQNP 3CD6P 2KW2A 2VLOA 1VQOP 2VSQA 2N50A 1QVFO 1E6JP 2KR5A 2L22A 2FADA 4XRQA 4BPHA 2PNGA 2VLPA 5EJDA 2EFJA 1IMQA 1AUMA 4GR2A 2DGYA 4XFZA 3G1IA 2K2QA 1YIJP 4QKOA 3CCQP 1DV5A 1IMPA 1Q81Q 3NTEA 1D1DA 2GDXA 2LIUA 4H2WC 3LMOA 1EOQA 1VQ9P 2CQ8A 1YHQP 5HGOA 2CG5B 5KP8B 5KP6B 1M1KQ 4XFYA 1ACPA 2QEXP 1Q86Q 4MRTC 3G1GA 5DCKA 2N98A 4DG9A 3H47A 2AFEA 1A8OA 3G26A 1YJNP 2LPKA 1GPJA 2JO0A 2JYGA 2M8LA 4H2XC 2KORA 4H2YC 3H4EA 2M5RA 4WYMA 1X3OA 2KG9A 4PXHB 2JQ4A 2FQ0A 4IZ6A 1E0HA 2JYLA 2LF4A 2NO8A 3H0DA 2OTJP 1NJIQ 3CCRP 2JGPA 1RO2A 3RG6C 2Z45A 3EJDA 3DPHA 1Q7YQ 3CC7P 1VQLP 3CC4P 1L0IA 1QVGO 3DS1A 5F2NA 2GZIA 5BS2A 3B5IA 5F2OA 1GXHA 4U0BA 2GZEA 2XT1A 3DS2A 2LL8A 2MD9A 1YI2P 2GYKA 3CXCO 1VQ6P 2BHVA 2ONTA 3CPWO 1YJ9P 1K73Q 4PH1A 1KQSO 2AVAA 1DNYA 2KOQA 3G29A 4XROA 1VQ7P 5CZDB 1JJ2O 3Q20A 2PY8A 2LIWA 1S72P 5JPAA 1RNIA 5HGLA 2L4BA 1QRJA 3HYBA 2PENA 4M0IA 2LTEA 1KD1Q 2LMLA 1YJWP 2GZFA 3E2DA 3EJBA 2FAEA 1BXIA 2AF8A 1ZNVA 3CCUP 2KG6A 1BAJA 1UJZA 2N5HA 2VLNA 2XZ1C 3CCMP 4PH0A 1AYIA 5HGMA 2MVVA 1RO0A 3GZLA 1VQMP 4XFXA 3DS0A 3I55P 4IPYA 3CCSP 4U0EA 2KGEA 2L0QA 5KP7B 3G0VA 1K30A 3EJEA 3CCLP 2K0XA 2EIAA 5BS1A 3CCEP 1K8AQ 1M6NA 2X2BA 1FR2A 2FHSC 2LKIA 2KGAA 1CEIA 2KOOA 2KGDA 2AFDA 3CE7A 1VQ5P 1K9MQ 1VQ4P 2FQ2A 2PEJA 3NY7B 2JU1A 1VQKP 4F37A 2JBGA 2OARA 2M8NA 4R0MA 2K92A 3DS3A 2MF4A 2KG8A 3G28A 1N8RQ 2KOPA 3RG2A 2WPTA 2JB0A 2L6EA 2K5XA 2JU2A 2KODA 2K0YA 3DTJA 1HQBA 3LRYA 2MVUA 2LOLA 2KOSA 2GZJA 2QNWA 2FVEA 1W2BO 2EHSA 1M90Q 4U0CA 2QA4P 3GKLC 2DNWA 2PEQA 4COPA 1HY8A 3GZMA 3CCVP 3CMEP 2JAZA 3G21A 1L0HA 3B4QA 5EW5E 2Z44A 2CGQA 2ERHA 2Z46A 2N6ZA 4U0AA 3DS4A 3G6EP 1KC8Q 1Q82Q 7CEIA 1NQ4A 2PEMA 4CA3A 2KWLA 3CCJP 1GXGA 1T8KA 2GZGA 2K93A 1M6EX 2EHTA 2FVFA 2MY5A 2CNRA 2EG5A 3U43A 2L9FA 5I4TG 3I56P 1KLPA 2KGCA 2MR8A 1AF8A 3MGEA 2ROQA 1VQ8P 4GR6A 4QNBA 1OR5A 3HZQA 2K0DX 5F2KA 4HKGA 2BUOA 2PEKA 2M8PA 3M1MA 1IUQA 2FQ1A 2PEIA 4NEOA 2XV6A 1UNKA 3P05A 1M74A 3DS5A 4U0FA 4COCA 1YITP 1EMVA 2OTLP 4U0DA 3WBHA 4BPGA 1VHNA 1Z6MA 3CC2P 2P9XA 3OW2O 1ZMBA 3G4SP 2PEOA 2K94A 4UHPB 3VRLC 1F80D 2FACA 2N6YA 2GDYA 2XZ0D 2MR7A 5HVCA 2CWOA 2FVAA 1VQPP 3G71P 3GJNA 5HV8A 2XXMA 5HGNA 2E1MA 1A43A 2N5IA
chains in the Genus database with same CATH topology
2K93A 2FQ0A 3EJEA 2K0XA 4IZ6A 2EHTA 4BPFA 2FVFA 2GDWA 4PWVB 2MY5A 2CNRA 1VKUA 2X2BA 2KW2A 2FHSC 2LKIA 2JGPA 2VSQA 2L9FA 2N50A 2KGAA 2KR5A 1KLPA 2KGCA 2MR8A 1AF8A 2KOOA 2KGDA 2ROQA 3EJDA 2AFDA 2L22A 3CE7A 2FADA 4BPHA 2FQ2A 2PNGA 1L0IA 5EJDA 1OR5A 3NY7B 2JU1A 2LL8A 2MD9A 4R0MA 2K2QA 2K92A 2MF4A 4HKGA 2KG8A 1DV5A 2AVAA 1DNYA 2KOQA 2KOPA 3RG2A 2FQ1A 5CZDB 4NEOA 2GDXA 2LIUA 4H2WC 2JU2A 3LMOA 2CQ8A 2K0YA 2CG5B 5KP8B 2LIWA 1HQBA 5KP6B 2MVUA 2LOLA 2L4BA 1ACPA 4BPGA 2KOSA 2LTEA 4MRTC 2QNWA 2FVEA 2N98A 4DG9A 2LMLA 2K94A 3EJBA 2EHSA 2FAEA 2AFEA 2AF8A 2DNWA 1F80D 2FACA 2LPKA 2KG6A 1HY8A 3GZMA 2N6YA 2GDYA 4H2XC 2N5HA 2KORA 2XZ0D 2XZ1C 1L0HA 2MR7A 2CGQA 2MVVA 5HVCA 2FVAA 2N6ZA 4H2YC 3GZLA 2M5RA 1X3OA 5HV8A 1NQ4A 2KG9A 4CA3A 2KWLA 4PXHB 2JQ4A 2KGEA 1T8KA 2L0QA 2N5IA 5KP7B
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2K93 A;  2FQ0 A;  3EJE A;  2K0X A;  4IZ6 A;  2EHT A;  4BPF A;  2FVF A;  2GDW A;  4PWV B;  2MY5 A;  2CNR A;  1VKU A;  2X2B A;  2KW2 A;  2FHS C;  2LKI A;  2JGP A;  2VSQ A;  2L9F A;  2N50 A;  2KGA A;  2KR5 A;  1KLP A;  2KGC A;  2MR8 A;  1AF8 A;  2KOO A;  2KGD A;  2ROQ A;  3EJD A;  2AFD A;  2L22 A;  3CE7 A;  2FAD A;  4BPH A;  2FQ2 A;  2PNG A;  1L0I A;  5EJD A;  1OR5 A;  3NY7 B;  2JU1 A;  2LL8 A;  2MD9 A;  4R0M A;  2K2Q A;  2K92 A;  2MF4 A;  4HKG A;  2KG8 A;  1DV5 A;  2AVA A;  1DNY A;  2KOQ A;  2KOP A;  3RG2 A;  2FQ1 A;  5CZD B;  4NEO A;  2GDX A;  2LIU A;  4H2W C;  2JU2 A;  3LMO A;  2CQ8 A;  2K0Y A;  2CG5 B;  5KP8 B;  2LIW A;  1HQB A;  5KP6 B;  2MVU A;  2LOL A;  2L4B A;  1ACP A;  4BPG A;  2KOS A;  2LTE A;  4MRT C;  2QNW A;  2FVE A;  2N98 A;  4DG9 A;  2LML A;  2K94 A;  3EJB A;  2EHS A;  2FAE A;  2AFE A;  2AF8 A;  2DNW A;  1F80 D;  2FAC A;  2LPK A;  2KG6 A;  1HY8 A;  3GZM A;  2N6Y A;  2GDY A;  4H2X C;  2N5H A;  2KOR A;  2XZ0 D;  2XZ1 C;  1L0H A;  2MR7 A;  2CGQ A;  2MVV A;  5HVC A;  2FVA A;  2N6Z A;  4H2Y C;  3GZL A;  2M5R A;  1X3O A;  5HV8 A;  1NQ4 A;  2KG9 A;  4CA3 A;  2KWL A;  4PXH B;  2JQ4 A;  2KGE A;  1T8K A;  2L0Q A;  2N5I A;  5KP7 B; 
#chains in the Genus database with same CATH topology
 3CMA P;  4BPF A;  2GDW A;  4PWV B;  1MZ8 A;  1EIA A;  1VKU A;  2VLQ A;  1VQN P;  3CD6 P;  2KW2 A;  2VLO A;  1VQO P;  2VSQ A;  2N50 A;  1QVF O;  1E6J P;  2KR5 A;  2L22 A;  2FAD A;  4XRQ A;  4BPH A;  2PNG A;  2VLP A;  5EJD A;  2EFJ A;  1IMQ A;  1AUM A;  4GR2 A;  2DGY A;  4XFZ A;  3G1I A;  2K2Q A;  1YIJ P;  4QKO A;  3CCQ P;  1DV5 A;  1IMP A;  1Q81 Q;  3NTE A;  1D1D A;  2GDX A;  2LIU A;  4H2W C;  3LMO A;  1EOQ A;  1VQ9 P;  2CQ8 A;  1YHQ P;  5HGO A;  2CG5 B;  5KP8 B;  5KP6 B;  1M1K Q;  4XFY A;  1ACP A;  2QEX P;  1Q86 Q;  4MRT C;  3G1G A;  5DCK A;  2N98 A;  4DG9 A;  3H47 A;  2AFE A;  1A8O A;  3G26 A;  1YJN P;  2LPK A;  1GPJ A;  2JO0 A;  2JYG A;  2M8L A;  4H2X C;  2KOR A;  4H2Y C;  3H4E A;  2M5R A;  4WYM A;  1X3O A;  2KG9 A;  4PXH B;  2JQ4 A;  2FQ0 A;  4IZ6 A;  1E0H A;  2JYL A;  2LF4 A;  2NO8 A;  3H0D A;  2OTJ P;  1NJI Q;  3CCR P;  2JGP A;  1RO2 A;  3RG6 C;  2Z45 A;  3EJD A;  3DPH A;  1Q7Y Q;  3CC7 P;  1VQL P;  3CC4 P;  1L0I A;  1QVG O;  3DS1 A;  5F2N A;  2GZI A;  5BS2 A;  3B5I A;  5F2O A;  1GXH A;  4U0B A;  2GZE A;  2XT1 A;  3DS2 A;  2LL8 A;  2MD9 A;  1YI2 P;  2GYK A;  3CXC O;  1VQ6 P;  2BHV A;  2ONT A;  3CPW O;  1YJ9 P;  1K73 Q;  4PH1 A;  1KQS O;  2AVA A;  1DNY A;  2KOQ A;  3G29 A;  4XRO A;  1VQ7 P;  5CZD B;  1JJ2 O;  3Q20 A;  2PY8 A;  2LIW A;  1S72 P;  5JPA A;  1RNI A;  5HGL A;  2L4B A;  1QRJ A;  3HYB A;  2PEN A;  4M0I A;  2LTE A;  1KD1 Q;  2LML A;  1YJW P;  2GZF A;  3E2D A;  3EJB A;  2FAE A;  1BXI A;  2AF8 A;  1ZNV A;  3CCU P;  2KG6 A;  1BAJ A;  1UJZ A;  2N5H A;  2VLN A;  2XZ1 C;  3CCM P;  4PH0 A;  1AYI A;  5HGM A;  2MVV A;  1RO0 A;  3GZL A;  1VQM P;  4XFX A;  3DS0 A;  3I55 P;  4IPY A;  3CCS P;  4U0E A;  2KGE A;  2L0Q A;  5KP7 B;  3G0V A;  1K30 A;  3EJE A;  3CCL P;  2K0X A;  2EIA A;  5BS1 A;  3CCE P;  1K8A Q;  1M6N A;  2X2B A;  1FR2 A;  2FHS C;  2LKI A;  2KGA A;  1CEI A;  2KOO A;  2KGD A;  2AFD A;  3CE7 A;  1VQ5 P;  1K9M Q;  1VQ4 P;  2FQ2 A;  2PEJ A;  3NY7 B;  2JU1 A;  1VQK P;  4F37 A;  2JBG A;  2OAR A;  2M8N A;  4R0M A;  2K92 A;  3DS3 A;  2MF4 A;  2KG8 A;  3G28 A;  1N8R Q;  2KOP A;  3RG2 A;  2WPT A;  2JB0 A;  2L6E A;  2K5X A;  2JU2 A;  2KOD A;  2K0Y A;  3DTJ A;  1HQB A;  3LRY A;  2MVU A;  2LOL A;  2KOS A;  2GZJ A;  2QNW A;  2FVE A;  1W2B O;  2EHS A;  1M90 Q;  4U0C A;  2QA4 P;  3GKL C;  2DNW A;  2PEQ A;  4COP A;  1HY8 A;  3GZM A;  3CCV P;  3CME P;  2JAZ A;  3G21 A;  1L0H A;  3B4Q A;  5EW5 E;  2Z44 A;  2CGQ A;  2ERH A;  2Z46 A;  2N6Z A;  4U0A A;  3DS4 A;  3G6E P;  1KC8 Q;  1Q82 Q;  7CEI A;  1NQ4 A;  2PEM A;  4CA3 A;  2KWL A;  3CCJ P;  1GXG A;  1T8K A;  2GZG A;  2K93 A;  1M6E X;  2EHT A;  2FVF A;  2MY5 A;  2CNR A;  2EG5 A;  3U43 A;  2L9F A;  5I4T G;  3I56 P;  1KLP A;  2KGC A;  2MR8 A;  1AF8 A;  3MGE A;  2ROQ A;  1VQ8 P;  4GR6 A;  4QNB A;  1OR5 A;  3HZQ A;  2K0D X;  5F2K A;  4HKG A;  2BUO A;  2PEK A;  2M8P A;  3M1M A;  1IUQ A;  2FQ1 A;  2PEI A;  4NEO A;  2XV6 A;  1UNK A;  3P05 A;  1M74 A;  3DS5 A;  4U0F A;  4COC A;  1YIT P;  1EMV A;  2OTL P;  4U0D A;  3WBH A;  4BPG A;  1VHN A;  1Z6M A;  3CC2 P;  2P9X A;  3OW2 O;  1ZMB A;  3G4S P;  2PEO A;  2K94 A;  4UHP B;  3VRL C;  1F80 D;  2FAC A;  2N6Y A;  2GDY A;  2XZ0 D;  2MR7 A;  5HVC A;  2CWO A;  2FVA A;  1VQP P;  3G71 P;  3GJN A;  5HV8 A;  2XXM A;  5HGN A;  2E1M A;  1A43 A;  2N5I A; 
#chains in the Genus database with same CATH homology
 2K93 A;  2FQ0 A;  3EJE A;  2K0X A;  4IZ6 A;  2EHT A;  4BPF A;  2FVF A;  2GDW A;  4PWV B;  2MY5 A;  2CNR A;  1VKU A;  2X2B A;  2KW2 A;  2FHS C;  2LKI A;  2JGP A;  2VSQ A;  2L9F A;  2N50 A;  2KGA A;  2KR5 A;  1KLP A;  2KGC A;  2MR8 A;  1AF8 A;  2KOO A;  2KGD A;  2ROQ A;  3EJD A;  2AFD A;  2L22 A;  3CE7 A;  2FAD A;  4BPH A;  2FQ2 A;  2PNG A;  1L0I A;  5EJD A;  1OR5 A;  3NY7 B;  2JU1 A;  2LL8 A;  2MD9 A;  4R0M A;  2K2Q A;  2K92 A;  2MF4 A;  4HKG A;  2KG8 A;  1DV5 A;  2AVA A;  1DNY A;  2KOQ A;  2KOP A;  3RG2 A;  2FQ1 A;  5CZD B;  4NEO A;  2GDX A;  2LIU A;  4H2W C;  2JU2 A;  3LMO A;  2CQ8 A;  2K0Y A;  2CG5 B;  5KP8 B;  2LIW A;  1HQB A;  5KP6 B;  2MVU A;  2LOL A;  2L4B A;  1ACP A;  4BPG A;  2KOS A;  2LTE A;  4MRT C;  2QNW A;  2FVE A;  2N98 A;  4DG9 A;  2LML A;  2K94 A;  3EJB A;  2EHS A;  2FAE A;  2AFE A;  2AF8 A;  2DNW A;  1F80 D;  2FAC A;  2LPK A;  2KG6 A;  1HY8 A;  3GZM A;  2N6Y A;  2GDY A;  4H2X C;  2N5H A;  2KOR A;  2XZ0 D;  2XZ1 C;  1L0H A;  2MR7 A;  2CGQ A;  2MVV A;  5HVC A;  2FVA A;  2N6Z A;  4H2Y C;  3GZL A;  2M5R A;  1X3O A;  5HV8 A;  1NQ4 A;  2KG9 A;  4CA3 A;  2KWL A;  4PXH B;  2JQ4 A;  2KGE A;  1T8K A;  2L0Q A;  2N5I A;  5KP7 B; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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