2PNGA

Type i rat fatty acid synthase acyl carrier protein (acp) domain
Total Genus 17
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
17
sequence length
89
structure length
89
Chain Sequence
GDGEAQRDLVKAVAHILGIRDLAGINLDSSLADLGLDSLMGVEVRQILEREHDLVLPIREVRQLTLRKLQEMSSKAGSDTELAAPKSKN
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Fatty acid synthase (EC 2.3.1.85)
publication title A Mammalian type I Fatty Acid synthase acyl carrier protein domain does not sequester acyl chains.
pubmed doi rcsb
source organism Rattus norvegicus
molecule tags Transferase
total genus 17
structure length 89
sequence length 89
ec nomenclature ec 1.1.1.100: 3-oxoacyl-[acyl-carrier-protein] reductase.
pdb deposition date 2007-04-24

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2pngA01
4MRTC 2CQ8A 5CZDB 2K0XA 1HY8A 2AFEA 4BPFA 2N5HA 1DNYA 5KP7B 1NQ4A 2KW2A 4R0MA 3LMOA 5EJDA 2DNWA 5HV8A 1VKUA 2XZ0D 2KG6A 3EJDA 2CG5B 2KG9A 2CNRA 2KGCA 2LKIA 2KGDA 3GZLA 2LTEA 5KP6B 1L0HA 2GDYA 4CA3A 2GDWA 1T8KA 2M5RA 2MY5A 2JGPA 2X2BA 2FVAA 1AF8A 2K2QA 2KOPA 4BPGA 2AFDA 4H2YC 2JU1A 5HVCA 4IZ6A 1L0IA 2L9FA 2XZ1C 2K94A 2AF8A 2LIWA 2GDXA 2MVUA 2CGQA 2KG8A 2FQ1A 2MF4A 2KGEA 2K0YA 2VSQA 2QNWA 1HQBA 1OR5A 2EHSA 2FADA 2ROQA 2LL8A 3RG2A 3EJBA 2KORA 2N6YA 1X3OA 2PNGA 2JU2A 2LPKA 2K93A 3CE7A 2KGAA 1KLPA 2KR5A 2L0QA 2JQ4A 2L4BA 2AVAA 2N6ZA 2MVVA 2FAEA 2FQ0A 4PWVB 2K92A 2LOLA 2KOOA 2N5IA 3EJEA 3GZMA 2EHTA 2LIUA 2L22A 2N50A 4PXHB 4HKGA 4H2XC 2FQ2A 2KOSA 2KWLA 4BPHA 2MR7A 2LMLA 2FVEA 2N98A 2KOQA 2FACA 4H2WC 2FVFA 1DV5A 5KP8B 4NEOA 2MR8A 2FHSC 4DG9A 1ACPA 2MD9A 1F80D 3NY7B
chains in the Genus database with same CATH superfamily
1YI2P 1VQ7P 2OTLP 1EIAA 2BUOA 3P05A 1K30A 4COPA 2QA4P 2PEKA 1DNYA 3DS5A 2EG5A 4R0MA 2EIAA 3G4SP 2M8LA 2DNWA 1KD1Q 3EJDA 3I55P 2CG5B 3G71P 2LKIA 2KGDA 2JYLA 2LTEA 1N8RQ 1L0HA 2GDYA 1T8KA 3G1GA 1GXGA 4BPGA 5JPAA 1VQPP 3OW2O 1YIJP 4U0BA 2L9FA 2K94A 1Q86Q 2AF8A 2GDXA 2MVUA 2CGQA 3B5IA 2FQ1A 1ZMBA 2FADA 3RG2A 1E0HA 3CMAP 2PNGA 3U43A 2K93A 2M8PA 3CE7A 3CC2P 2JAZA 2L4BA 2N6ZA 2JQ4A 2AVAA 1VQMP 1QVFO 1QVGO 2KOOA 2LOLA 3EJEA 1QRJA 1UNKA 2EHTA 1GXHA 4H2XC 1A43A 3HYBA 4BPHA 2MR7A 1VQ8P 2N98A 4H2WC 4U0DA 4WYMA 3MGEA 4U0CA 2MR8A 2FHSC 3NY7B 1M90Q 3M1MA 5CZDB 1BXIA 1VQ4P 2ONTA 4XFYA 3I56P 5KP7B 3GJNA 2OARA 5HV8A 2XZ0D 4GR6A 1M1KQ 3DS2A 4F37A 2KGCA 1A8OA 1YJ9P 2PEJA 5KP6B 5HGMA 1RO2A 4CA3A 3DTJA 2M5RA 1YITP 1Q81Q 4U0AA 2KOPA 1VQ5P 2VLNA 1YHQP 5HVCA 2XZ1C 2JB0A 2KG8A 2PEMA 2MF4A 2KGEA 4IPYA 2VLOA 2E1MA 2P9XA 3DS1A 1EMVA 2JYGA 2ROQA 2JBGA 3CXCO 2KORA 5HGOA 1VQ6P 1X3OA 4GR2A 1M74A 1AYIA 1K8AQ 1VQNP 2KR5A 4PH0A 3GZMA 2LIUA 2OTJP 3GKLC 2FQ2A 2KOSA 3H47A 2XT1A 2PEOA 2EFJA 1Q82Q 3RG6C 3CCEP 2FACA 2FVFA 2ERHA 1DV5A 2BHVA 4UHPB 2Z46A 4DG9A 1VQLP 1UJZA 1YJWP 4MRTC 3WBHA 2QEXP 1K9MQ 3G29A 2PEQA 4XFZA 1NQ4A 2KW2A 4PH1A 2DGYA 2Z44A 1NJIQ 1BAJA 5EJDA 2XXMA 3VRLC 2KG6A 2KG9A 2CNRA 3GZLA 2GDWA 2M8NA 2JGPA 2WPTA 1FR2A 4U0EA 2AFDA 4H2YC 5F2OA 1M6EX 4IZ6A 3NTEA 3CCLP 2LIWA 1S72P 1K73Q 2PEIA 3DS0A 2QNWA 1RO0A 1HQBA 1OR5A 2EHSA 4COCA 2LL8A 2GZIA 2JU2A 5I4TG 1D1DA 2LPKA 1IMQA 3G26A 1KC8Q 2KGAA 2KODA 1KLPA 5BS1A 2GZEA 2MVVA 2FAEA 2FQ0A 3CMEP 2JO0A 4PWVB 2PENA 1ZNVA 4PXHB 4HKGA 3CCRP 3CCQP 2KWLA 3CC7P 2LMLA 3DS4A 2FVEA 4U0FA 3DS3A 4M0IA 5KP8B 4NEOA 5DCKA 1ACPA 2MD9A 7CEIA 1F80D 3G0VA 2GZFA 2CQ8A 5BS2A 2K0XA 3Q20A 1HY8A 2AFEA 4BPFA 3CD6P 2XV6A 1EOQA 2K5XA 2N5HA 3CCMP 1Z6MA 3E2DA 3LMOA 1GPJA 1VKUA 1AUMA 3CC4P 3G1IA 2PY8A 5EW5E 2MY5A 2X2BA 2FVAA 1AF8A 2K2QA 1IUQA 2CWOA 1IMPA 2GZGA 2JU1A 1M6NA 2GZJA 1L0IA 3HZQA 3LRYA 4XROA 3CCVP 3G6EP 2VLQA 2K0DX 3H0DA 5HGNA 2K0YA 2L6EA 5F2NA 4XRQA 4QKOA 2VSQA 2Z45A 4XFXA 1KQSO 1VHNA 3EJBA 2N6YA 2NO8A 2VLPA 2LF4A 1MZ8A 3CPWO 4QNBA 1W2BO 2L0QA 5F2KA 1RNIA 3CCSP 3CCJP 1E6JP 3G28A 1YJNP 2K92A 3H4EA 2N5IA 1VQKP 1CEIA 3B4QA 2L22A 2N50A 3CCUP 2KOQA 5HGLA 1Q7YQ 2GYKA 3DPHA 1VQOP 3G21A 1JJ2O 1VQ9P
chains in the Genus database with same CATH topology
4MRTC 2CQ8A 5CZDB 2K0XA 1HY8A 2AFEA 4BPFA 2N5HA 1DNYA 5KP7B 1NQ4A 2KW2A 4R0MA 3LMOA 5EJDA 2DNWA 5HV8A 1VKUA 2XZ0D 2KG6A 3EJDA 2CG5B 2KG9A 2CNRA 2KGCA 2LKIA 2KGDA 3GZLA 2LTEA 5KP6B 1L0HA 2GDYA 4CA3A 2GDWA 1T8KA 2M5RA 2MY5A 2JGPA 2X2BA 2FVAA 1AF8A 2K2QA 2KOPA 4BPGA 2AFDA 4H2YC 2JU1A 5HVCA 4IZ6A 1L0IA 2L9FA 2XZ1C 2K94A 2AF8A 2LIWA 2GDXA 2MVUA 2CGQA 2KG8A 2FQ1A 2MF4A 2KGEA 2K0YA 2VSQA 2QNWA 1HQBA 1OR5A 2EHSA 2FADA 2ROQA 2LL8A 3RG2A 3EJBA 2KORA 2N6YA 1X3OA 2PNGA 2JU2A 2LPKA 2K93A 3CE7A 2KGAA 1KLPA 2KR5A 2L0QA 2JQ4A 2L4BA 2AVAA 2N6ZA 2MVVA 2FAEA 2FQ0A 4PWVB 2K92A 2LOLA 2KOOA 2N5IA 3EJEA 3GZMA 2EHTA 2LIUA 2L22A 2N50A 4PXHB 4HKGA 4H2XC 2FQ2A 2KOSA 2KWLA 4BPHA 2MR7A 2LMLA 2FVEA 2N98A 2KOQA 2FACA 4H2WC 2FVFA 1DV5A 5KP8B 4NEOA 2MR8A 2FHSC 4DG9A 1ACPA 2MD9A 1F80D 3NY7B
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4MRT C;  2CQ8 A;  5CZD B;  2K0X A;  1HY8 A;  2AFE A;  4BPF A;  2N5H A;  1DNY A;  5KP7 B;  1NQ4 A;  2KW2 A;  4R0M A;  3LMO A;  5EJD A;  2DNW A;  5HV8 A;  1VKU A;  2XZ0 D;  2KG6 A;  3EJD A;  2CG5 B;  2KG9 A;  2CNR A;  2KGC A;  2LKI A;  2KGD A;  3GZL A;  2LTE A;  5KP6 B;  1L0H A;  2GDY A;  4CA3 A;  2GDW A;  1T8K A;  2M5R A;  2MY5 A;  2JGP A;  2X2B A;  2FVA A;  1AF8 A;  2K2Q A;  2KOP A;  4BPG A;  2AFD A;  4H2Y C;  2JU1 A;  5HVC A;  4IZ6 A;  1L0I A;  2L9F A;  2XZ1 C;  2K94 A;  2AF8 A;  2LIW A;  2GDX A;  2MVU A;  2CGQ A;  2KG8 A;  2FQ1 A;  2MF4 A;  2KGE A;  2K0Y A;  2VSQ A;  2QNW A;  1HQB A;  1OR5 A;  2EHS A;  2FAD A;  2ROQ A;  2LL8 A;  3RG2 A;  3EJB A;  2KOR A;  2N6Y A;  1X3O A;  2PNG A;  2JU2 A;  2LPK A;  2K93 A;  3CE7 A;  2KGA A;  1KLP A;  2KR5 A;  2L0Q A;  2JQ4 A;  2L4B A;  2AVA A;  2N6Z A;  2MVV A;  2FAE A;  2FQ0 A;  4PWV B;  2K92 A;  2LOL A;  2KOO A;  2N5I A;  3EJE A;  3GZM A;  2EHT A;  2LIU A;  2L22 A;  2N50 A;  4PXH B;  4HKG A;  4H2X C;  2FQ2 A;  2KOS A;  2KWL A;  4BPH A;  2MR7 A;  2LML A;  2FVE A;  2N98 A;  2KOQ A;  2FAC A;  4H2W C;  2FVF A;  1DV5 A;  5KP8 B;  4NEO A;  2MR8 A;  2FHS C;  4DG9 A;  1ACP A;  2MD9 A;  1F80 D;  3NY7 B; 
#chains in the Genus database with same CATH topology
 1YI2 P;  1VQ7 P;  2OTL P;  1EIA A;  2BUO A;  3P05 A;  1K30 A;  4COP A;  2QA4 P;  2PEK A;  1DNY A;  3DS5 A;  2EG5 A;  4R0M A;  2EIA A;  3G4S P;  2M8L A;  2DNW A;  1KD1 Q;  3EJD A;  3I55 P;  2CG5 B;  3G71 P;  2LKI A;  2KGD A;  2JYL A;  2LTE A;  1N8R Q;  1L0H A;  2GDY A;  1T8K A;  3G1G A;  1GXG A;  4BPG A;  5JPA A;  1VQP P;  3OW2 O;  1YIJ P;  4U0B A;  2L9F A;  2K94 A;  1Q86 Q;  2AF8 A;  2GDX A;  2MVU A;  2CGQ A;  3B5I A;  2FQ1 A;  1ZMB A;  2FAD A;  3RG2 A;  1E0H A;  3CMA P;  2PNG A;  3U43 A;  2K93 A;  2M8P A;  3CE7 A;  3CC2 P;  2JAZ A;  2L4B A;  2N6Z A;  2JQ4 A;  2AVA A;  1VQM P;  1QVF O;  1QVG O;  2KOO A;  2LOL A;  3EJE A;  1QRJ A;  1UNK A;  2EHT A;  1GXH A;  4H2X C;  1A43 A;  3HYB A;  4BPH A;  2MR7 A;  1VQ8 P;  2N98 A;  4H2W C;  4U0D A;  4WYM A;  3MGE A;  4U0C A;  2MR8 A;  2FHS C;  3NY7 B;  1M90 Q;  3M1M A;  5CZD B;  1BXI A;  1VQ4 P;  2ONT A;  4XFY A;  3I56 P;  5KP7 B;  3GJN A;  2OAR A;  5HV8 A;  2XZ0 D;  4GR6 A;  1M1K Q;  3DS2 A;  4F37 A;  2KGC A;  1A8O A;  1YJ9 P;  2PEJ A;  5KP6 B;  5HGM A;  1RO2 A;  4CA3 A;  3DTJ A;  2M5R A;  1YIT P;  1Q81 Q;  4U0A A;  2KOP A;  1VQ5 P;  2VLN A;  1YHQ P;  5HVC A;  2XZ1 C;  2JB0 A;  2KG8 A;  2PEM A;  2MF4 A;  2KGE A;  4IPY A;  2VLO A;  2E1M A;  2P9X A;  3DS1 A;  1EMV A;  2JYG A;  2ROQ A;  2JBG A;  3CXC O;  2KOR A;  5HGO A;  1VQ6 P;  1X3O A;  4GR2 A;  1M74 A;  1AYI A;  1K8A Q;  1VQN P;  2KR5 A;  4PH0 A;  3GZM A;  2LIU A;  2OTJ P;  3GKL C;  2FQ2 A;  2KOS A;  3H47 A;  2XT1 A;  2PEO A;  2EFJ A;  1Q82 Q;  3RG6 C;  3CCE P;  2FAC A;  2FVF A;  2ERH A;  1DV5 A;  2BHV A;  4UHP B;  2Z46 A;  4DG9 A;  1VQL P;  1UJZ A;  1YJW P;  4MRT C;  3WBH A;  2QEX P;  1K9M Q;  3G29 A;  2PEQ A;  4XFZ A;  1NQ4 A;  2KW2 A;  4PH1 A;  2DGY A;  2Z44 A;  1NJI Q;  1BAJ A;  5EJD A;  2XXM A;  3VRL C;  2KG6 A;  2KG9 A;  2CNR A;  3GZL A;  2GDW A;  2M8N A;  2JGP A;  2WPT A;  1FR2 A;  4U0E A;  2AFD A;  4H2Y C;  5F2O A;  1M6E X;  4IZ6 A;  3NTE A;  3CCL P;  2LIW A;  1S72 P;  1K73 Q;  2PEI A;  3DS0 A;  2QNW A;  1RO0 A;  1HQB A;  1OR5 A;  2EHS A;  4COC A;  2LL8 A;  2GZI A;  2JU2 A;  5I4T G;  1D1D A;  2LPK A;  1IMQ A;  3G26 A;  1KC8 Q;  2KGA A;  2KOD A;  1KLP A;  5BS1 A;  2GZE A;  2MVV A;  2FAE A;  2FQ0 A;  3CME P;  2JO0 A;  4PWV B;  2PEN A;  1ZNV A;  4PXH B;  4HKG A;  3CCR P;  3CCQ P;  2KWL A;  3CC7 P;  2LML A;  3DS4 A;  2FVE A;  4U0F A;  3DS3 A;  4M0I A;  5KP8 B;  4NEO A;  5DCK A;  1ACP A;  2MD9 A;  7CEI A;  1F80 D;  3G0V A;  2GZF A;  2CQ8 A;  5BS2 A;  2K0X A;  3Q20 A;  1HY8 A;  2AFE A;  4BPF A;  3CD6 P;  2XV6 A;  1EOQ A;  2K5X A;  2N5H A;  3CCM P;  1Z6M A;  3E2D A;  3LMO A;  1GPJ A;  1VKU A;  1AUM A;  3CC4 P;  3G1I A;  2PY8 A;  5EW5 E;  2MY5 A;  2X2B A;  2FVA A;  1AF8 A;  2K2Q A;  1IUQ A;  2CWO A;  1IMP A;  2GZG A;  2JU1 A;  1M6N A;  2GZJ A;  1L0I A;  3HZQ A;  3LRY A;  4XRO A;  3CCV P;  3G6E P;  2VLQ A;  2K0D X;  3H0D A;  5HGN A;  2K0Y A;  2L6E A;  5F2N A;  4XRQ A;  4QKO A;  2VSQ A;  2Z45 A;  4XFX A;  1KQS O;  1VHN A;  3EJB A;  2N6Y A;  2NO8 A;  2VLP A;  2LF4 A;  1MZ8 A;  3CPW O;  4QNB A;  1W2B O;  2L0Q A;  5F2K A;  1RNI A;  3CCS P;  3CCJ P;  1E6J P;  3G28 A;  1YJN P;  2K92 A;  3H4E A;  2N5I A;  1VQK P;  1CEI A;  3B4Q A;  2L22 A;  2N50 A;  3CCU P;  2KOQ A;  5HGL A;  1Q7Y Q;  2GYK A;  3DPH A;  1VQO P;  3G21 A;  1JJ2 O;  1VQ9 P; 
#chains in the Genus database with same CATH homology
 4MRT C;  2CQ8 A;  5CZD B;  2K0X A;  1HY8 A;  2AFE A;  4BPF A;  2N5H A;  1DNY A;  5KP7 B;  1NQ4 A;  2KW2 A;  4R0M A;  3LMO A;  5EJD A;  2DNW A;  5HV8 A;  1VKU A;  2XZ0 D;  2KG6 A;  3EJD A;  2CG5 B;  2KG9 A;  2CNR A;  2KGC A;  2LKI A;  2KGD A;  3GZL A;  2LTE A;  5KP6 B;  1L0H A;  2GDY A;  4CA3 A;  2GDW A;  1T8K A;  2M5R A;  2MY5 A;  2JGP A;  2X2B A;  2FVA A;  1AF8 A;  2K2Q A;  2KOP A;  4BPG A;  2AFD A;  4H2Y C;  2JU1 A;  5HVC A;  4IZ6 A;  1L0I A;  2L9F A;  2XZ1 C;  2K94 A;  2AF8 A;  2LIW A;  2GDX A;  2MVU A;  2CGQ A;  2KG8 A;  2FQ1 A;  2MF4 A;  2KGE A;  2K0Y A;  2VSQ A;  2QNW A;  1HQB A;  1OR5 A;  2EHS A;  2FAD A;  2ROQ A;  2LL8 A;  3RG2 A;  3EJB A;  2KOR A;  2N6Y A;  1X3O A;  2PNG A;  2JU2 A;  2LPK A;  2K93 A;  3CE7 A;  2KGA A;  1KLP A;  2KR5 A;  2L0Q A;  2JQ4 A;  2L4B A;  2AVA A;  2N6Z A;  2MVV A;  2FAE A;  2FQ0 A;  4PWV B;  2K92 A;  2LOL A;  2KOO A;  2N5I A;  3EJE A;  3GZM A;  2EHT A;  2LIU A;  2L22 A;  2N50 A;  4PXH B;  4HKG A;  4H2X C;  2FQ2 A;  2KOS A;  2KWL A;  4BPH A;  2MR7 A;  2LML A;  2FVE A;  2N98 A;  2KOQ A;  2FAC A;  4H2W C;  2FVF A;  1DV5 A;  5KP8 B;  4NEO A;  2MR8 A;  2FHS C;  4DG9 A;  1ACP A;  2MD9 A;  1F80 D;  3NY7 B; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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