2PNGA

Type i rat fatty acid synthase acyl carrier protein (acp) domain
Total Genus 17
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
17
sequence length
89
structure length
89
Chain Sequence
GDGEAQRDLVKAVAHILGIRDLAGINLDSSLADLGLDSLMGVEVRQILEREHDLVLPIREVRQLTLRKLQEMSSKAGSDTELAAPKSKN
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title A Mammalian type I Fatty Acid synthase acyl carrier protein domain does not sequester acyl chains.
pubmed doi rcsb
source organism Rattus norvegicus
molecule tags Transferase
molecule keywords Fatty acid synthase (EC 2.3.1.85)
total genus 17
structure length 89
sequence length 89
ec nomenclature ec 1.1.1.100: 3-oxoacyl-[acyl-carrier-protein] reductase.
pdb deposition date 2007-04-24

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2pngA01
1T8KA 5KP6B 4H2WC 2PNGA 2JGPA 2EHTA 4PWVB 2N5IA 2DNWA 2MR8A 2N5HA 1HY8A 2KGAA 2L9FA 2KOPA 2X2BA 2LPKA 2GDWA 2FVAA 2N6YA 2MR7A 2AVAA 2CNRA 2GDYA 2KOOA 2KG6A 2KORA 1L0IA 2QNWA 1OR5A 2L0QA 2N50A 2XZ0D 1HQBA 2M5RA 4HKGA 2K0YA 2K0XA 4R0MA 2FQ1A 1X3OA 2JU1A 2L4BA 1DNYA 2FQ2A 4BPFA 4DG9A 1F80D 2L22A 2FAEA 2LTEA 1L0HA 2KW2A 4CA3A 5KP8B 1ACPA 4MRTC 2JQ4A 2K94A 5CZDB 2K93A 4BPHA 4NEOA 2MVUA 2XZ1C 2ROQA 2KWLA 2LL8A 2GDXA 5HVCA 3EJBA 2FADA 4BPGA 3RG2A 2KGEA 2AFDA 5HV8A 1VKUA 2AFEA 2AF8A 2JU2A 2KGCA 5KP7B 4H2XC 2LIUA 2FVFA 3NY7B 1DV5A 1NQ4A 2FACA 5EJDA 2MD9A 2MY5A 2FVEA 2K2QA 3CE7A 2FQ0A 2LMLA 1KLPA 2KOQA 2LKIA 2KG8A 2KGDA 2CGQA 4IZ6A 2N6ZA 2KOSA 3GZMA 2KG9A 2N98A 2MVVA 4PXHB 2CG5B 3GZLA 2EHSA 2KR5A 2CQ8A 4H2YC 3LMOA 2FHSC 2K92A 2MF4A 1AF8A 3EJDA 3EJEA 2LOLA 2VSQA 2LIWA
chains in the Genus database with same CATH superfamily
1T8KA 3CCSP 2XV6A 2VLPA 4XFXA 3G26A 3CCQP 1HY8A 3GKLC 2FVAA 3DS0A 2AVAA 5HGLA 2GDYA 3H0DA 2KG6A 1L0IA 1OR5A 4U0AA 2PEKA 1HQBA 3CCRP 4HKGA 1X3OA 2JU1A 2WPTA 2FQ2A 4BPFA 1VQ6P 1F80D 1ZMBA 2FAEA 5F2KA 4XFYA 2LTEA 1L0HA 2KW2A 5KP8B 4MRTC 3G1GA 5CZDB 1VQMP 1YI2P 2OARA 2K93A 4UHPB 4NEOA 2MVUA 3G28A 5F2OA 2KWLA 2JAZA 1Z6MA 2QEXP 2GDXA 3MGEA 4COCA 2FADA 3RG6C 3RG2A 2AFDA 4PH1A 4GR6A 5BS1A 3G6EP 2AF8A 1VQPP 2KGCA 3H47A 2GYKA 3DPHA 3G71P 1Q86Q 3CCMP 2K2QA 1QVFO 2ERHA 1QVGO 2N6ZA 3CD6P 3VRLC 1VQLP 1YITP 4PXHB 3CC7P 2DGYA 1GPJA 2FHSC 2K92A 2VLOA 5F2NA 3EJDA 3EJEA 2LOLA 1A8OA 3DS3A 2JO0A 2EFJA 2PNGA 2PEIA 3CC2P 2N5IA 1KD1Q 7CEIA 1YJNP 2KGAA 3CMEP 1W2BO 2L6EA 1IUQA 2K0DX 3OW2O 5HGNA 2KOOA 2NO8A 2KORA 3GJNA 3I55P 4U0CA 1EOQA 2XXMA 2XZ0D 3CCJP 5I4TG 2GZJA 2K0XA 2FQ1A 2L4BA 1DNYA 2XT1A 2PEOA 2L22A 2JQ4A 1VQOP 2GZGA 4BPHA 1Q82Q 4XRQA 1K9MQ 2XZ1C 4U0BA 1VQ5P 4F37A 4IPYA 3U43A 1RNIA 1K8AQ 1VKUA 2AFEA 2OTJP 1CEIA 1GXGA 1YJ9P 3CCEP 4H2XC 1S72P 2JB0A 2BHVA 3DS4A 1DV5A 4U0FA 2FACA 4XFZA 1Q7YQ 2FVEA 1KC8Q 2PEQA 4M0IA 1KLPA 2KG8A 2KGDA 3H4EA 2VLQA 2GZIA 1M6EX 1D1DA 3B5IA 2MVVA 4PH0A 1UNKA 1N8RQ 2KR5A 2CQ8A 3G1IA 4H2YC 1AF8A 2GZEA 2Z45A 2OTLP 3I56P 1VQ8P 5DCKA 2EHTA 2DNWA 2PY8A 4COPA 2Z46A 1BXIA 4WYMA 1Q81Q 3DS2A 2L9FA 2GDWA 3CC4P 2N6YA 3G29A 2CNRA 2QNWA 2M8PA 3CMAP 4R0MA 2JBGA 4DG9A 4CA3A 1M6NA 3CPWO 2ROQA 2LL8A 1VQ7P 5HVCA 3EJBA 4BPGA 2KGEA 5HGMA 2JYGA 3P05A 1YIJP 3G0VA 3DS5A 2M8LA 2P9XA 3LRYA 3CXCO 2JU2A 5KP7B 1M90Q 1M74A 2LIUA 3NY7B 1UJZA 1NQ4A 1K30A 5EJDA 2MY5A 3NTEA 2FQ0A 2LMLA 1YJWP 1NJIQ 1YHQP 2N98A 1RO0A 2BUOA 2QA4P 2MF4A 1VHNA 1A43A 5KP6B 2PEJA 4H2WC 4U0EA 3CCVP 4XROA 1AUMA 1EIAA 1VQ4P 3DS1A 2JGPA 1E0HA 2Z44A 4PWVB 2PEMA 2MR8A 2N5HA 2KOPA 1GXHA 4U0DA 2X2BA 2LPKA 5JPAA 2MR7A 1VQ9P 2GZFA 2EG5A 5EW5E 2L0QA 2N50A 1EMVA 2M5RA 2KODA 2K0YA 1IMQA 1BAJA 3B4QA 4QNBA 1VQNP 1ACPA 2K5XA 3G21A 2K94A 1ZNVA 3HYBA 3HZQA 2EIAA 2ONTA 2M8NA 3E2DA 3M1MA 2VLNA 1AYIA 3G4SP 1JJ2O 5HV8A 4QKOA 1M1KQ 2CWOA 4GR2A 2FVFA 1IMPA 3DTJA 2E1MA 1KQSO 2MD9A 2JYLA 2LF4A 1MZ8A 1K73Q 3CE7A 5HGOA 3WBHA 2KOQA 2LKIA 2CGQA 4IZ6A 3CCUP 1QRJA 3CCLP 2KOSA 3GZMA 2KG9A 3Q20A 5BS2A 2CG5B 1FR2A 2PENA 3GZLA 2EHSA 1VQKP 1E6JP 3LMOA 2VSQA 1RO2A 2LIWA
chains in the Genus database with same CATH topology
1T8KA 5KP6B 4H2WC 2PNGA 2JGPA 2EHTA 4PWVB 2N5IA 2DNWA 2MR8A 2N5HA 1HY8A 2KGAA 2L9FA 2KOPA 2X2BA 2LPKA 2GDWA 2FVAA 2N6YA 2MR7A 2AVAA 2CNRA 2GDYA 2KOOA 2KG6A 2KORA 1L0IA 2QNWA 1OR5A 2L0QA 2N50A 2XZ0D 1HQBA 2M5RA 4HKGA 2K0YA 2K0XA 4R0MA 2FQ1A 1X3OA 2JU1A 2L4BA 1DNYA 2FQ2A 4BPFA 4DG9A 1F80D 2L22A 2FAEA 2LTEA 1L0HA 2KW2A 4CA3A 5KP8B 1ACPA 4MRTC 2JQ4A 2K94A 5CZDB 2K93A 4BPHA 4NEOA 2MVUA 2XZ1C 2ROQA 2KWLA 2LL8A 2GDXA 5HVCA 3EJBA 2FADA 4BPGA 3RG2A 2KGEA 2AFDA 5HV8A 1VKUA 2AFEA 2AF8A 2JU2A 2KGCA 5KP7B 4H2XC 2LIUA 2FVFA 3NY7B 1DV5A 1NQ4A 2FACA 5EJDA 2MD9A 2MY5A 2FVEA 2K2QA 3CE7A 2FQ0A 2LMLA 1KLPA 2KOQA 2LKIA 2KG8A 2KGDA 2CGQA 4IZ6A 2N6ZA 2KOSA 3GZMA 2KG9A 2N98A 2MVVA 4PXHB 2CG5B 3GZLA 2EHSA 2KR5A 2CQ8A 4H2YC 3LMOA 2FHSC 2K92A 2MF4A 1AF8A 3EJDA 3EJEA 2LOLA 2VSQA 2LIWA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1T8K A;  5KP6 B;  4H2W C;  2PNG A;  2JGP A;  2EHT A;  4PWV B;  2N5I A;  2DNW A;  2MR8 A;  2N5H A;  1HY8 A;  2KGA A;  2L9F A;  2KOP A;  2X2B A;  2LPK A;  2GDW A;  2FVA A;  2N6Y A;  2MR7 A;  2AVA A;  2CNR A;  2GDY A;  2KOO A;  2KG6 A;  2KOR A;  1L0I A;  2QNW A;  1OR5 A;  2L0Q A;  2N50 A;  2XZ0 D;  1HQB A;  2M5R A;  4HKG A;  2K0Y A;  2K0X A;  4R0M A;  2FQ1 A;  1X3O A;  2JU1 A;  2L4B A;  1DNY A;  2FQ2 A;  4BPF A;  4DG9 A;  1F80 D;  2L22 A;  2FAE A;  2LTE A;  1L0H A;  2KW2 A;  4CA3 A;  5KP8 B;  1ACP A;  4MRT C;  2JQ4 A;  2K94 A;  5CZD B;  2K93 A;  4BPH A;  4NEO A;  2MVU A;  2XZ1 C;  2ROQ A;  2KWL A;  2LL8 A;  2GDX A;  5HVC A;  3EJB A;  2FAD A;  4BPG A;  3RG2 A;  2KGE A;  2AFD A;  5HV8 A;  1VKU A;  2AFE A;  2AF8 A;  2JU2 A;  2KGC A;  5KP7 B;  4H2X C;  2LIU A;  2FVF A;  3NY7 B;  1DV5 A;  1NQ4 A;  2FAC A;  5EJD A;  2MD9 A;  2MY5 A;  2FVE A;  2K2Q A;  3CE7 A;  2FQ0 A;  2LML A;  1KLP A;  2KOQ A;  2LKI A;  2KG8 A;  2KGD A;  2CGQ A;  4IZ6 A;  2N6Z A;  2KOS A;  3GZM A;  2KG9 A;  2N98 A;  2MVV A;  4PXH B;  2CG5 B;  3GZL A;  2EHS A;  2KR5 A;  2CQ8 A;  4H2Y C;  3LMO A;  2FHS C;  2K92 A;  2MF4 A;  1AF8 A;  3EJD A;  3EJE A;  2LOL A;  2VSQ A;  2LIW A; 
#chains in the Genus database with same CATH topology
 1T8K A;  3CCS P;  2XV6 A;  2VLP A;  4XFX A;  3G26 A;  3CCQ P;  1HY8 A;  3GKL C;  2FVA A;  3DS0 A;  2AVA A;  5HGL A;  2GDY A;  3H0D A;  2KG6 A;  1L0I A;  1OR5 A;  4U0A A;  2PEK A;  1HQB A;  3CCR P;  4HKG A;  1X3O A;  2JU1 A;  2WPT A;  2FQ2 A;  4BPF A;  1VQ6 P;  1F80 D;  1ZMB A;  2FAE A;  5F2K A;  4XFY A;  2LTE A;  1L0H A;  2KW2 A;  5KP8 B;  4MRT C;  3G1G A;  5CZD B;  1VQM P;  1YI2 P;  2OAR A;  2K93 A;  4UHP B;  4NEO A;  2MVU A;  3G28 A;  5F2O A;  2KWL A;  2JAZ A;  1Z6M A;  2QEX P;  2GDX A;  3MGE A;  4COC A;  2FAD A;  3RG6 C;  3RG2 A;  2AFD A;  4PH1 A;  4GR6 A;  5BS1 A;  3G6E P;  2AF8 A;  1VQP P;  2KGC A;  3H47 A;  2GYK A;  3DPH A;  3G71 P;  1Q86 Q;  3CCM P;  2K2Q A;  1QVF O;  2ERH A;  1QVG O;  2N6Z A;  3CD6 P;  3VRL C;  1VQL P;  1YIT P;  4PXH B;  3CC7 P;  2DGY A;  1GPJ A;  2FHS C;  2K92 A;  2VLO A;  5F2N A;  3EJD A;  3EJE A;  2LOL A;  1A8O A;  3DS3 A;  2JO0 A;  2EFJ A;  2PNG A;  2PEI A;  3CC2 P;  2N5I A;  1KD1 Q;  7CEI A;  1YJN P;  2KGA A;  3CME P;  1W2B O;  2L6E A;  1IUQ A;  2K0D X;  3OW2 O;  5HGN A;  2KOO A;  2NO8 A;  2KOR A;  3GJN A;  3I55 P;  4U0C A;  1EOQ A;  2XXM A;  2XZ0 D;  3CCJ P;  5I4T G;  2GZJ A;  2K0X A;  2FQ1 A;  2L4B A;  1DNY A;  2XT1 A;  2PEO A;  2L22 A;  2JQ4 A;  1VQO P;  2GZG A;  4BPH A;  1Q82 Q;  4XRQ A;  1K9M Q;  2XZ1 C;  4U0B A;  1VQ5 P;  4F37 A;  4IPY A;  3U43 A;  1RNI A;  1K8A Q;  1VKU A;  2AFE A;  2OTJ P;  1CEI A;  1GXG A;  1YJ9 P;  3CCE P;  4H2X C;  1S72 P;  2JB0 A;  2BHV A;  3DS4 A;  1DV5 A;  4U0F A;  2FAC A;  4XFZ A;  1Q7Y Q;  2FVE A;  1KC8 Q;  2PEQ A;  4M0I A;  1KLP A;  2KG8 A;  2KGD A;  3H4E A;  2VLQ A;  2GZI A;  1M6E X;  1D1D A;  3B5I A;  2MVV A;  4PH0 A;  1UNK A;  1N8R Q;  2KR5 A;  2CQ8 A;  3G1I A;  4H2Y C;  1AF8 A;  2GZE A;  2Z45 A;  2OTL P;  3I56 P;  1VQ8 P;  5DCK A;  2EHT A;  2DNW A;  2PY8 A;  4COP A;  2Z46 A;  1BXI A;  4WYM A;  1Q81 Q;  3DS2 A;  2L9F A;  2GDW A;  3CC4 P;  2N6Y A;  3G29 A;  2CNR A;  2QNW A;  2M8P A;  3CMA P;  4R0M A;  2JBG A;  4DG9 A;  4CA3 A;  1M6N A;  3CPW O;  2ROQ A;  2LL8 A;  1VQ7 P;  5HVC A;  3EJB A;  4BPG A;  2KGE A;  5HGM A;  2JYG A;  3P05 A;  1YIJ P;  3G0V A;  3DS5 A;  2M8L A;  2P9X A;  3LRY A;  3CXC O;  2JU2 A;  5KP7 B;  1M90 Q;  1M74 A;  2LIU A;  3NY7 B;  1UJZ A;  1NQ4 A;  1K30 A;  5EJD A;  2MY5 A;  3NTE A;  2FQ0 A;  2LML A;  1YJW P;  1NJI Q;  1YHQ P;  2N98 A;  1RO0 A;  2BUO A;  2QA4 P;  2MF4 A;  1VHN A;  1A43 A;  5KP6 B;  2PEJ A;  4H2W C;  4U0E A;  3CCV P;  4XRO A;  1AUM A;  1EIA A;  1VQ4 P;  3DS1 A;  2JGP A;  1E0H A;  2Z44 A;  4PWV B;  2PEM A;  2MR8 A;  2N5H A;  2KOP A;  1GXH A;  4U0D A;  2X2B A;  2LPK A;  5JPA A;  2MR7 A;  1VQ9 P;  2GZF A;  2EG5 A;  5EW5 E;  2L0Q A;  2N50 A;  1EMV A;  2M5R A;  2KOD A;  2K0Y A;  1IMQ A;  1BAJ A;  3B4Q A;  4QNB A;  1VQN P;  1ACP A;  2K5X A;  3G21 A;  2K94 A;  1ZNV A;  3HYB A;  3HZQ A;  2EIA A;  2ONT A;  2M8N A;  3E2D A;  3M1M A;  2VLN A;  1AYI A;  3G4S P;  1JJ2 O;  5HV8 A;  4QKO A;  1M1K Q;  2CWO A;  4GR2 A;  2FVF A;  1IMP A;  3DTJ A;  2E1M A;  1KQS O;  2MD9 A;  2JYL A;  2LF4 A;  1MZ8 A;  1K73 Q;  3CE7 A;  5HGO A;  3WBH A;  2KOQ A;  2LKI A;  2CGQ A;  4IZ6 A;  3CCU P;  1QRJ A;  3CCL P;  2KOS A;  3GZM A;  2KG9 A;  3Q20 A;  5BS2 A;  2CG5 B;  1FR2 A;  2PEN A;  3GZL A;  2EHS A;  1VQK P;  1E6J P;  3LMO A;  2VSQ A;  1RO2 A;  2LIW A; 
#chains in the Genus database with same CATH homology
 1T8K A;  5KP6 B;  4H2W C;  2PNG A;  2JGP A;  2EHT A;  4PWV B;  2N5I A;  2DNW A;  2MR8 A;  2N5H A;  1HY8 A;  2KGA A;  2L9F A;  2KOP A;  2X2B A;  2LPK A;  2GDW A;  2FVA A;  2N6Y A;  2MR7 A;  2AVA A;  2CNR A;  2GDY A;  2KOO A;  2KG6 A;  2KOR A;  1L0I A;  2QNW A;  1OR5 A;  2L0Q A;  2N50 A;  2XZ0 D;  1HQB A;  2M5R A;  4HKG A;  2K0Y A;  2K0X A;  4R0M A;  2FQ1 A;  1X3O A;  2JU1 A;  2L4B A;  1DNY A;  2FQ2 A;  4BPF A;  4DG9 A;  1F80 D;  2L22 A;  2FAE A;  2LTE A;  1L0H A;  2KW2 A;  4CA3 A;  5KP8 B;  1ACP A;  4MRT C;  2JQ4 A;  2K94 A;  5CZD B;  2K93 A;  4BPH A;  4NEO A;  2MVU A;  2XZ1 C;  2ROQ A;  2KWL A;  2LL8 A;  2GDX A;  5HVC A;  3EJB A;  2FAD A;  4BPG A;  3RG2 A;  2KGE A;  2AFD A;  5HV8 A;  1VKU A;  2AFE A;  2AF8 A;  2JU2 A;  2KGC A;  5KP7 B;  4H2X C;  2LIU A;  2FVF A;  3NY7 B;  1DV5 A;  1NQ4 A;  2FAC A;  5EJD A;  2MD9 A;  2MY5 A;  2FVE A;  2K2Q A;  3CE7 A;  2FQ0 A;  2LML A;  1KLP A;  2KOQ A;  2LKI A;  2KG8 A;  2KGD A;  2CGQ A;  4IZ6 A;  2N6Z A;  2KOS A;  3GZM A;  2KG9 A;  2N98 A;  2MVV A;  4PXH B;  2CG5 B;  3GZL A;  2EHS A;  2KR5 A;  2CQ8 A;  4H2Y C;  3LMO A;  2FHS C;  2K92 A;  2MF4 A;  1AF8 A;  3EJD A;  3EJE A;  2LOL A;  2VSQ A;  2LIW A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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