2PNGA

Type i rat fatty acid synthase acyl carrier protein (acp) domain
Total Genus 17
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
17
sequence length
89
structure length
89
Chain Sequence
GDGEAQRDLVKAVAHILGIRDLAGINLDSSLADLGLDSLMGVEVRQILEREHDLVLPIREVRQLTLRKLQEMSSKAGSDTELAAPKSKN
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
source organism Rattus norvegicus
publication title A Mammalian type I Fatty Acid synthase acyl carrier protein domain does not sequester acyl chains.
pubmed doi rcsb
molecule keywords Fatty acid synthase (EC 2.3.1.85)
total genus 17
structure length 89
sequence length 89
ec nomenclature ec 1.1.1.100: 3-oxoacyl-[acyl-carrier-protein] reductase.
pdb deposition date 2007-04-24

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2pngA01
2DNWA 2KORA 2FVAA 1DNYA 2M5RA 2CGQA 1NQ4A 2L9FA 3CE7A 2XZ0D 2K0XA 2VSQA 4HKGA 3EJDA 4BPFA 2KWLA 5KP7B 2N5HA 3RG2A 2K92A 2LTEA 5CZDB 2KOSA 2GDXA 2KGEA 4BPGA 2XZ1C 2KOOA 2LIWA 1VKUA 4R0MA 2CQ8A 4NEOA 2GDWA 2MR7A 3GZLA 4BPHA 2KGCA 5KP6B 2KR5A 2CG5B 2JQ4A 2FQ2A 2FACA 3EJEA 4CA3A 2N6YA 5KP8B 1OR5A 2K2QA 1AF8A 2KW2A 2MY5A 4H2XC 2K0YA 1F80D 2N5IA 2KG8A 2MR8A 2K93A 2MD9A 2FHSC 2QNWA 2MVVA 4PWVB 4MRTC 2KOPA 2FQ1A 4H2WC 2L22A 1L0HA 2JGPA 4DG9A 2LL8A 2X2BA 3GZMA 2JU2A 2LKIA 2LOLA 2MVUA 1ACPA 2K94A 2N6ZA 2LMLA 2PNGA 1DV5A 2KG6A 1T8KA 1X3OA 2L4BA 2EHSA 2KOQA 2AVAA 2KGAA 2ROQA 2LPKA 3NY7B 5HV8A 1HY8A 2N50A 1L0IA 2AF8A 2FVEA 4PXHB 2AFEA 2EHTA 2AFDA 2N98A 2FADA 2FAEA 2L0QA 2CNRA 2LIUA 2FQ0A 2KG9A 2KGDA 2FVFA 1HQBA 2JU1A 4IZ6A 3EJBA 4H2YC 3LMOA 5EJDA 2GDYA 1KLPA 2MF4A 5HVCA
chains in the Genus database with same CATH superfamily
2DNWA 1UNKA 1Q81Q 2CGQA 3CC4P 1NQ4A 2OTJP 3CE7A 4HKGA 3EJDA 2KWLA 3RG2A 1EOQA 3I56P 1YIJP 2QA4P 1M1KQ 2LIWA 3G28A 4U0DA 1QRJA 1CEIA 2FACA 4CA3A 2N6YA 1K30A 4H2XC 1IUQA 1F80D 2N5IA 1QVGO 2MR8A 2PENA 4PH0A 4MRTC 3OW2O 4GR2A 1VQ4P 4M0IA 2PEMA 1VQLP 4IPYA 2PEIA 2GZJA 3B4QA 2JU2A 2MVUA 1DV5A 2EHSA 2AVAA 2VLQA 2LPKA 2JAZA 1HY8A 2AF8A 2FVEA 2XXMA 2M8NA 2JBGA 4XRQA 1QVFO 2L6EA 2CNRA 5DCKA 3CCLP 1HQBA 2JU1A 3LMOA 3CCUP 2VLPA 5HVCA 1ZMBA 1W2BO 3DS2A 1VQNP 2KORA 2ONTA 3WBHA 2FVAA 1KC8Q 1UJZA 1VQ8P 2VSQA 2LTEA 5CZDB 2PEQA 2KOSA 2GDXA 3M1MA 2KGEA 2XZ1C 1VKUA 2MR7A 1GXGA 5BS2A 5HGMA 4XFZA 2KR5A 1EMVA 1YHQP 1M74A 2EG5A 2FQ2A 3G6EP 2KW2A 2PEJA 1E6JP 3RG6C 2JB0A 1KQSO 2QEXP 2KG8A 4QKOA 2K93A 3CCMP 2MD9A 4PWVB 3HYBA 3B5IA 1FR2A 2PEKA 1N8RQ 2E1MA 2JGPA 4DG9A 2LL8A 4XFXA 5BS1A 3DS0A 2K0DX 1BXIA 3P05A 2LMLA 2BUOA 4U0EA 3DS5A 2L4BA 1Q7YQ 2KOQA 2KGAA 3NTEA 5HV8A 5I4TG 2PY8A 2N50A 1L0IA 1S72P 1VQ6P 4XROA 1A43A 2DGYA 2OTLP 1K73Q 2M8PA 2FADA 1Q82Q 3HZQA 3GKLC 2LIUA 1VQ9P 2FQ0A 2KG9A 1E0HA 2FVFA 2WPTA 3E2DA 4H2YC 1BAJA 1RNIA 2MF4A 5F2KA 5HGOA 4XFYA 1A8OA 1AYIA 4U0AA 3CCEP 3G26A 3CC2P 2XZ0D 2K0XA 4BPFA 1YJWP 3H4EA 2K92A 3DTJA 1RO0A 2JYLA 2Z45A 4U0BA 2OARA 5F2OA 4BPGA 2Z44A 5JPAA 3MGEA 5HGLA 4NEOA 2GDWA 3GZLA 1VQPP 2GYKA 1YJ9P 2LF4A 3CCRP 5KP6B 1VQOP 2JQ4A 3G1GA 3G0VA 4QNBA 2K2QA 2M8LA 1AF8A 3DS4A 4U0FA 1Q86Q 2MY5A 3DS3A 3DPHA 3G1IA 3CXCO 2EIAA 3U43A 1VQ5P 2QNWA 2MVVA 1Z6MA 3CC7P 2KOPA 2XT1A 4H2WC 2VLNA 3H47A 1L0HA 2GZGA 1VQKP 4COCA 1IMPA 2LKIA 2LOLA 2K94A 2N6ZA 3G4SP 2PNGA 2JYGA 2P9XA 2KG6A 1T8KA 2ROQA 3G21A 3CCQP 4PXHB 3GJNA 1VQMP 2Z46A 2K5XA 5EW5E 2AFEA 2EHTA 4F37A 2N98A 2GZIA 1AUMA 4UHPB 3H0DA 2GZEA 2ERHA 4IZ6A 3EJBA 1GXHA 3CCSP 3DS1A 1DNYA 2M5RA 4PH1A 4WYMA 1IMQA 2L9FA 4COPA 1D1DA 5KP7B 2N5HA 3LRYA 2KOOA 4R0MA 2CQ8A 2VLOA 1M90Q 1YI2P 4BPHA 2KGCA 1NJIQ 2BHVA 2CG5B 1YJNP 1JJ2O 1RO2A 3EJEA 5KP8B 2CWOA 1OR5A 5HGNA 1GPJA 3CMAP 2K0YA 1EIAA 4U0CA 3I55P 2KODA 2XV6A 2FHSC 1ZNVA 5F2NA 2FQ1A 3CCJP 3G29A 2PEOA 2L22A 7CEIA 2X2BA 3GZMA 1ACPA 3CD6P 1M6NA 1X3OA 3CPWO 3NY7B 1M6EX 2EFJA 3Q20A 2NO8A 1VHNA 3CMEP 4GR6A 2AFDA 1KD1Q 3VRLC 2FAEA 2L0QA 1K8AQ 3G71P 1K9MQ 2KGDA 3CCVP 1YITP 1VQ7P 5EJDA 2GZFA 1MZ8A 2GDYA 1KLPA 2JO0A
chains in the Genus database with same CATH topology
2DNWA 2KORA 2FVAA 1DNYA 2M5RA 2CGQA 1NQ4A 2L9FA 3CE7A 2XZ0D 2K0XA 2VSQA 4HKGA 3EJDA 4BPFA 2KWLA 5KP7B 2N5HA 3RG2A 2K92A 2LTEA 5CZDB 2KOSA 2GDXA 2KGEA 4BPGA 2XZ1C 2KOOA 2LIWA 1VKUA 4R0MA 2CQ8A 4NEOA 2GDWA 2MR7A 3GZLA 4BPHA 2KGCA 5KP6B 2KR5A 2CG5B 2JQ4A 2FQ2A 2FACA 3EJEA 4CA3A 2N6YA 5KP8B 1OR5A 2K2QA 1AF8A 2KW2A 2MY5A 4H2XC 2K0YA 1F80D 2N5IA 2KG8A 2MR8A 2K93A 2MD9A 2FHSC 2QNWA 2MVVA 4PWVB 4MRTC 2KOPA 2FQ1A 4H2WC 2L22A 1L0HA 2JGPA 4DG9A 2LL8A 2X2BA 3GZMA 2JU2A 2LKIA 2LOLA 2MVUA 1ACPA 2K94A 2N6ZA 2LMLA 2PNGA 1DV5A 2KG6A 1T8KA 1X3OA 2L4BA 2EHSA 2KOQA 2AVAA 2KGAA 2ROQA 2LPKA 3NY7B 5HV8A 1HY8A 2N50A 1L0IA 2AF8A 2FVEA 4PXHB 2AFEA 2EHTA 2AFDA 2N98A 2FADA 2FAEA 2L0QA 2CNRA 2LIUA 2FQ0A 2KG9A 2KGDA 2FVFA 1HQBA 2JU1A 4IZ6A 3EJBA 4H2YC 3LMOA 5EJDA 2GDYA 1KLPA 2MF4A 5HVCA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2DNW A;  2KOR A;  2FVA A;  1DNY A;  2M5R A;  2CGQ A;  1NQ4 A;  2L9F A;  3CE7 A;  2XZ0 D;  2K0X A;  2VSQ A;  4HKG A;  3EJD A;  4BPF A;  2KWL A;  5KP7 B;  2N5H A;  3RG2 A;  2K92 A;  2LTE A;  5CZD B;  2KOS A;  2GDX A;  2KGE A;  4BPG A;  2XZ1 C;  2KOO A;  2LIW A;  1VKU A;  4R0M A;  2CQ8 A;  4NEO A;  2GDW A;  2MR7 A;  3GZL A;  4BPH A;  2KGC A;  5KP6 B;  2KR5 A;  2CG5 B;  2JQ4 A;  2FQ2 A;  2FAC A;  3EJE A;  4CA3 A;  2N6Y A;  5KP8 B;  1OR5 A;  2K2Q A;  1AF8 A;  2KW2 A;  2MY5 A;  4H2X C;  2K0Y A;  1F80 D;  2N5I A;  2KG8 A;  2MR8 A;  2K93 A;  2MD9 A;  2FHS C;  2QNW A;  2MVV A;  4PWV B;  4MRT C;  2KOP A;  2FQ1 A;  4H2W C;  2L22 A;  1L0H A;  2JGP A;  4DG9 A;  2LL8 A;  2X2B A;  3GZM A;  2JU2 A;  2LKI A;  2LOL A;  2MVU A;  1ACP A;  2K94 A;  2N6Z A;  2LML A;  2PNG A;  1DV5 A;  2KG6 A;  1T8K A;  1X3O A;  2L4B A;  2EHS A;  2KOQ A;  2AVA A;  2KGA A;  2ROQ A;  2LPK A;  3NY7 B;  5HV8 A;  1HY8 A;  2N50 A;  1L0I A;  2AF8 A;  2FVE A;  4PXH B;  2AFE A;  2EHT A;  2AFD A;  2N98 A;  2FAD A;  2FAE A;  2L0Q A;  2CNR A;  2LIU A;  2FQ0 A;  2KG9 A;  2KGD A;  2FVF A;  1HQB A;  2JU1 A;  4IZ6 A;  3EJB A;  4H2Y C;  3LMO A;  5EJD A;  2GDY A;  1KLP A;  2MF4 A;  5HVC A; 
#chains in the Genus database with same CATH topology
 2DNW A;  1UNK A;  1Q81 Q;  2CGQ A;  3CC4 P;  1NQ4 A;  2OTJ P;  3CE7 A;  4HKG A;  3EJD A;  2KWL A;  3RG2 A;  1EOQ A;  3I56 P;  1YIJ P;  2QA4 P;  1M1K Q;  2LIW A;  3G28 A;  4U0D A;  1QRJ A;  1CEI A;  2FAC A;  4CA3 A;  2N6Y A;  1K30 A;  4H2X C;  1IUQ A;  1F80 D;  2N5I A;  1QVG O;  2MR8 A;  2PEN A;  4PH0 A;  4MRT C;  3OW2 O;  4GR2 A;  1VQ4 P;  4M0I A;  2PEM A;  1VQL P;  4IPY A;  2PEI A;  2GZJ A;  3B4Q A;  2JU2 A;  2MVU A;  1DV5 A;  2EHS A;  2AVA A;  2VLQ A;  2LPK A;  2JAZ A;  1HY8 A;  2AF8 A;  2FVE A;  2XXM A;  2M8N A;  2JBG A;  4XRQ A;  1QVF O;  2L6E A;  2CNR A;  5DCK A;  3CCL P;  1HQB A;  2JU1 A;  3LMO A;  3CCU P;  2VLP A;  5HVC A;  1ZMB A;  1W2B O;  3DS2 A;  1VQN P;  2KOR A;  2ONT A;  3WBH A;  2FVA A;  1KC8 Q;  1UJZ A;  1VQ8 P;  2VSQ A;  2LTE A;  5CZD B;  2PEQ A;  2KOS A;  2GDX A;  3M1M A;  2KGE A;  2XZ1 C;  1VKU A;  2MR7 A;  1GXG A;  5BS2 A;  5HGM A;  4XFZ A;  2KR5 A;  1EMV A;  1YHQ P;  1M74 A;  2EG5 A;  2FQ2 A;  3G6E P;  2KW2 A;  2PEJ A;  1E6J P;  3RG6 C;  2JB0 A;  1KQS O;  2QEX P;  2KG8 A;  4QKO A;  2K93 A;  3CCM P;  2MD9 A;  4PWV B;  3HYB A;  3B5I A;  1FR2 A;  2PEK A;  1N8R Q;  2E1M A;  2JGP A;  4DG9 A;  2LL8 A;  4XFX A;  5BS1 A;  3DS0 A;  2K0D X;  1BXI A;  3P05 A;  2LML A;  2BUO A;  4U0E A;  3DS5 A;  2L4B A;  1Q7Y Q;  2KOQ A;  2KGA A;  3NTE A;  5HV8 A;  5I4T G;  2PY8 A;  2N50 A;  1L0I A;  1S72 P;  1VQ6 P;  4XRO A;  1A43 A;  2DGY A;  2OTL P;  1K73 Q;  2M8P A;  2FAD A;  1Q82 Q;  3HZQ A;  3GKL C;  2LIU A;  1VQ9 P;  2FQ0 A;  2KG9 A;  1E0H A;  2FVF A;  2WPT A;  3E2D A;  4H2Y C;  1BAJ A;  1RNI A;  2MF4 A;  5F2K A;  5HGO A;  4XFY A;  1A8O A;  1AYI A;  4U0A A;  3CCE P;  3G26 A;  3CC2 P;  2XZ0 D;  2K0X A;  4BPF A;  1YJW P;  3H4E A;  2K92 A;  3DTJ A;  1RO0 A;  2JYL A;  2Z45 A;  4U0B A;  2OAR A;  5F2O A;  4BPG A;  2Z44 A;  5JPA A;  3MGE A;  5HGL A;  4NEO A;  2GDW A;  3GZL A;  1VQP P;  2GYK A;  1YJ9 P;  2LF4 A;  3CCR P;  5KP6 B;  1VQO P;  2JQ4 A;  3G1G A;  3G0V A;  4QNB A;  2K2Q A;  2M8L A;  1AF8 A;  3DS4 A;  4U0F A;  1Q86 Q;  2MY5 A;  3DS3 A;  3DPH A;  3G1I A;  3CXC O;  2EIA A;  3U43 A;  1VQ5 P;  2QNW A;  2MVV A;  1Z6M A;  3CC7 P;  2KOP A;  2XT1 A;  4H2W C;  2VLN A;  3H47 A;  1L0H A;  2GZG A;  1VQK P;  4COC A;  1IMP A;  2LKI A;  2LOL A;  2K94 A;  2N6Z A;  3G4S P;  2PNG A;  2JYG A;  2P9X A;  2KG6 A;  1T8K A;  2ROQ A;  3G21 A;  3CCQ P;  4PXH B;  3GJN A;  1VQM P;  2Z46 A;  2K5X A;  5EW5 E;  2AFE A;  2EHT A;  4F37 A;  2N98 A;  2GZI A;  1AUM A;  4UHP B;  3H0D A;  2GZE A;  2ERH A;  4IZ6 A;  3EJB A;  1GXH A;  3CCS P;  3DS1 A;  1DNY A;  2M5R A;  4PH1 A;  4WYM A;  1IMQ A;  2L9F A;  4COP A;  1D1D A;  5KP7 B;  2N5H A;  3LRY A;  2KOO A;  4R0M A;  2CQ8 A;  2VLO A;  1M90 Q;  1YI2 P;  4BPH A;  2KGC A;  1NJI Q;  2BHV A;  2CG5 B;  1YJN P;  1JJ2 O;  1RO2 A;  3EJE A;  5KP8 B;  2CWO A;  1OR5 A;  5HGN A;  1GPJ A;  3CMA P;  2K0Y A;  1EIA A;  4U0C A;  3I55 P;  2KOD A;  2XV6 A;  2FHS C;  1ZNV A;  5F2N A;  2FQ1 A;  3CCJ P;  3G29 A;  2PEO A;  2L22 A;  7CEI A;  2X2B A;  3GZM A;  1ACP A;  3CD6 P;  1M6N A;  1X3O A;  3CPW O;  3NY7 B;  1M6E X;  2EFJ A;  3Q20 A;  2NO8 A;  1VHN A;  3CME P;  4GR6 A;  2AFD A;  1KD1 Q;  3VRL C;  2FAE A;  2L0Q A;  1K8A Q;  3G71 P;  1K9M Q;  2KGD A;  3CCV P;  1YIT P;  1VQ7 P;  5EJD A;  2GZF A;  1MZ8 A;  2GDY A;  1KLP A;  2JO0 A; 
#chains in the Genus database with same CATH homology
 2DNW A;  2KOR A;  2FVA A;  1DNY A;  2M5R A;  2CGQ A;  1NQ4 A;  2L9F A;  3CE7 A;  2XZ0 D;  2K0X A;  2VSQ A;  4HKG A;  3EJD A;  4BPF A;  2KWL A;  5KP7 B;  2N5H A;  3RG2 A;  2K92 A;  2LTE A;  5CZD B;  2KOS A;  2GDX A;  2KGE A;  4BPG A;  2XZ1 C;  2KOO A;  2LIW A;  1VKU A;  4R0M A;  2CQ8 A;  4NEO A;  2GDW A;  2MR7 A;  3GZL A;  4BPH A;  2KGC A;  5KP6 B;  2KR5 A;  2CG5 B;  2JQ4 A;  2FQ2 A;  2FAC A;  3EJE A;  4CA3 A;  2N6Y A;  5KP8 B;  1OR5 A;  2K2Q A;  1AF8 A;  2KW2 A;  2MY5 A;  4H2X C;  2K0Y A;  1F80 D;  2N5I A;  2KG8 A;  2MR8 A;  2K93 A;  2MD9 A;  2FHS C;  2QNW A;  2MVV A;  4PWV B;  4MRT C;  2KOP A;  2FQ1 A;  4H2W C;  2L22 A;  1L0H A;  2JGP A;  4DG9 A;  2LL8 A;  2X2B A;  3GZM A;  2JU2 A;  2LKI A;  2LOL A;  2MVU A;  1ACP A;  2K94 A;  2N6Z A;  2LML A;  2PNG A;  1DV5 A;  2KG6 A;  1T8K A;  1X3O A;  2L4B A;  2EHS A;  2KOQ A;  2AVA A;  2KGA A;  2ROQ A;  2LPK A;  3NY7 B;  5HV8 A;  1HY8 A;  2N50 A;  1L0I A;  2AF8 A;  2FVE A;  4PXH B;  2AFE A;  2EHT A;  2AFD A;  2N98 A;  2FAD A;  2FAE A;  2L0Q A;  2CNR A;  2LIU A;  2FQ0 A;  2KG9 A;  2KGD A;  2FVF A;  1HQB A;  2JU1 A;  4IZ6 A;  3EJB A;  4H2Y C;  3LMO A;  5EJD A;  2GDY A;  1KLP A;  2MF4 A;  5HVC A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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