2K0YA

The actinorhodin apo acyl carrier protein from s. coelicolor
Total Genus 28
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
28
sequence length
86
structure length
86
Chain Sequence
MATLLTTDDLRRALVESAGETDGTDLSGDFLDLRFEDIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLINGALAEAA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title An ACP Structural Switch: Conformational Differences between the Apo and Holo Forms of the Actinorhodin Polyketide Synthase Acyl Carrier Protein.
pubmed doi rcsb
source organism Streptomyces coelicolor
molecule tags Transport protein
molecule keywords Actinorhodin polyketide synthase acyl carrier protein
total genus 28
structure length 86
sequence length 86
ec nomenclature
pdb deposition date 2008-02-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2k0yA00
2K93A 2CNRA 2GDXA 2JU2A 1ACPA 2L4BA 2K92A 2GDWA 2N98A 2EHSA 1HY8A 2PNGA 4H2YC 2EHTA 2K0YA 2MF4A 1NQ4A 2LPKA 2FACA 4PXHB 2XZ1C 4BPGA 5HVCA 2FQ2A 4CA3A 4HKGA 2FADA 2X2BA 5HV8A 2M5RA 5KP7B 3EJDA 3EJEA 2KOSA 2DNWA 3GZLA 2KGEA 2L0QA 1L0HA 2AFDA 1X3OA 2VSQA 2N6YA 2KG9A 2FHSC 2K0XA 2AF8A 2AVAA 1HQBA 5KP6B 2KGAA 3RG2A 2JGPA 3LMOA 1L0IA 1DV5A 2MVVA 1VKUA 3GZMA 2CGQA 2LIWA 2FAEA 4H2WC 2FVEA 2KG8A 3CE7A 4NEOA 2GDYA 2KGCA 5KP8B 5EJDA 2KOQA 1KLPA 2KWLA 4H2XC 2LOLA 2MVUA 2LIUA 2FVFA 2LL8A 4DG9A 2K2QA 2KW2A 3NY7B 4R0MA 2CQ8A 2FVAA 2MD9A 2L9FA 2N6ZA 2QNWA 1F80D 2KOPA 2KG6A 2MR7A 1T8KA 2N50A 2KR5A 2FQ0A 2CG5B 2ROQA 2MR8A 2KORA 2L22A 4PWVB 1OR5A 4BPFA 3EJBA 5CZDB 1DNYA 2N5IA 2AFEA 4BPHA 2JU1A 2MY5A 2N5HA 2LTEA 2JQ4A 2KOOA 2K94A 1AF8A 4MRTC 2LMLA 2XZ0D 2FQ1A 4IZ6A 2KGDA 2LKIA
chains in the Genus database with same CATH superfamily
1UJZA 3DS3A 1ACPA 5HGOA 2GDWA 4H2YC 4F37A 4PXHB 1W2BO 2XZ1C 3CCSP 1VQ5P 4CA3A 4HKGA 5KP7B 3EJDA 4COCA 1YHQP 1ZMBA 1VQ8P 1L0HA 2AFDA 2VSQA 2GZFA 2K0XA 2JAZA 5KP6B 3CC7P 2EIAA 3P05A 3I56P 2GZGA 3LMOA 1RNIA 1YJNP 2L6EA 2NO8A 1VKUA 4U0EA 2CGQA 2KG8A 1JJ2O 5EW5E 1E0HA 2KGCA 2KWLA 3HYBA 1GXGA 2K5XA 1AUMA 2MVUA 4DG9A 3GJNA 1FR2A 2L9FA 3LRYA 1RO0A 2KOPA 4PH0A 1Q86Q 1K8AQ 1KQSO 1QVFO 1EOQA 2KORA 4BPFA 2M8NA 2N5IA 4BPHA 3DTJA 4PH1A 2MY5A 1VQOP 1CEIA 2JQ4A 2K94A 1YI2P 1Z6MA 1AF8A 4MRTC 2E1MA 2QA4P 2FQ1A 4XRQA 2LKIA 3HZQA 2K93A 2CNRA 2XT1A 1VQ7P 2ERHA 2PEOA 3CCQP 5BS2A 3CCUP 2K92A 2KODA 2EFJA 5JPAA 2MF4A 2K0YA 1NQ4A 4COPA 4QNBA 1KD1Q 3NTEA 3G4SP 3G26A 1K73Q 4BPGA 3E2DA 3DPHA 1M6EX 2FADA 1UNKA 3DS0A 2KOSA 2DNWA 5HGLA 1X3OA 1VQ9P 2M8LA 2FHSC 2AF8A 3CD6P 1M74A 2GZIA 1ZNVA 3OW2O 2JGPA 1VQNP 1L0IA 1GXHA 2MVVA 2LIWA 1VQ6P 2FVEA 1M6NA 3CE7A 4NEOA 3CCVP 5KP8B 4XFYA 5EJDA 3WBHA 2BHVA 2LIUA 2LL8A 2K2QA 1VHNA 2CQ8A 1YITP 4IPYA 2FVAA 2VLPA 1MZ8A 1F80D 2KG6A 4WYMA 3U43A 4UHPB 3G1IA 2VLOA 1A8OA 3CCLP 1DNYA 2QEXP 2OARA 5F2KA 3CPWO 3CMEP 3DS2A 2LMLA 1VQMP 2BUOA 3B5IA 3DS1A 4IZ6A 1A43A 4U0FA 2GDXA 2JBGA 2PEIA 4U0AA 2JU2A 4U0BA 1HY8A 2LPKA 1AYIA 2K0DX 3G28A 3VRLC 7CEIA 2FQ2A 2X2BA 1S72P 1Q82Q 3GZLA 2L0QA 2PEKA 1E6JP 3G6EP 2N6YA 1HQBA 2JO0A 3RG2A 4U0CA 5F2NA 3MGEA 2PENA 1M90Q 2XV6A 3CMAP 1VQLP 1DV5A 4QKOA 1IUQA 2FAEA 4H2WC 1D1DA 2KOQA 2VLQA 4GR2A 4H2XC 2LOLA 2FVFA 2OTLP 5HGMA 2KW2A 1EMVA 5I4TG 1IMQA 4GR6A 2JB0A 2N6ZA 2QNWA 5F2OA 2MR7A 1T8KA 2PEMA 2FQ0A 2CG5B 2L22A 1OR5A 2P9XA 3EJBA 5CZDB 2LF4A 3M1MA 2AFEA 2PY8A 2JU1A 2PEJA 2N5HA 2JYLA 1IMPA 2LTEA 1BAJA 2GYKA 1NJIQ 2DGYA 1KC8Q 4XROA 2Z45A 4U0DA 3H4EA 2KGDA 3DS5A 3G29A 2L4BA 3CCJP 2N98A 2EHSA 2PNGA 1VQPP 2PEQA 2EHTA 2FACA 1N8RQ 2M8PA 5HVCA 5HV8A 2M5RA 1VQKP 3EJEA 3CCRP 3CC2P 2KGEA 3CCEP 2ONTA 2KG9A 3H47A 2AVAA 3DS4A 2KGAA 3G0VA 1Q7YQ 1YIJP 4XFZA 2JYGA 2VLNA 1YJ9P 3CXCO 4XFXA 3I55P 3GZMA 2Z44A 2GDYA 2Z46A 1QRJA 2GZEA 1M1KQ 1KLPA 3G1GA 1GPJA 1QVGO 2EG5A 3NY7B 4R0MA 5HGNA 3G71P 2MD9A 2OTJP 3GKLC 1Q81Q 1BXIA 3G21A 5DCKA 1K9MQ 3RG6C 2N50A 1VQ4P 2KR5A 2ROQA 2MR8A 4M0IA 4PWVB 1EIAA 3CCMP 1YJWP 1K30A 2KOOA 2GZJA 3CC4P 1RO2A 2CWOA 5BS1A 2XXMA 2WPTA 3B4QA 3H0DA 3Q20A 2XZ0D
chains in the Genus database with same CATH topology
2K93A 2CNRA 2GDXA 2JU2A 1ACPA 2L4BA 2K92A 2GDWA 2N98A 2EHSA 1HY8A 2PNGA 4H2YC 2EHTA 2K0YA 2MF4A 1NQ4A 2LPKA 2FACA 4PXHB 2XZ1C 4BPGA 5HVCA 2FQ2A 4CA3A 4HKGA 2FADA 2X2BA 5HV8A 2M5RA 5KP7B 3EJDA 3EJEA 2KOSA 2DNWA 3GZLA 2KGEA 2L0QA 1L0HA 2AFDA 1X3OA 2VSQA 2N6YA 2KG9A 2FHSC 2K0XA 2AF8A 2AVAA 1HQBA 5KP6B 2KGAA 3RG2A 2JGPA 3LMOA 1L0IA 1DV5A 2MVVA 1VKUA 3GZMA 2CGQA 2LIWA 2FAEA 4H2WC 2FVEA 2KG8A 3CE7A 4NEOA 2GDYA 2KGCA 5KP8B 5EJDA 2KOQA 1KLPA 2KWLA 4H2XC 2LOLA 2MVUA 2LIUA 2FVFA 2LL8A 4DG9A 2K2QA 2KW2A 3NY7B 4R0MA 2CQ8A 2FVAA 2MD9A 2L9FA 2N6ZA 2QNWA 1F80D 2KOPA 2KG6A 2MR7A 1T8KA 2N50A 2KR5A 2FQ0A 2CG5B 2ROQA 2MR8A 2KORA 2L22A 4PWVB 1OR5A 4BPFA 3EJBA 5CZDB 1DNYA 2N5IA 2AFEA 4BPHA 2JU1A 2MY5A 2N5HA 2LTEA 2JQ4A 2KOOA 2K94A 1AF8A 4MRTC 2LMLA 2XZ0D 2FQ1A 4IZ6A 2KGDA 2LKIA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2K93 A;  2CNR A;  2GDX A;  2JU2 A;  1ACP A;  2L4B A;  2K92 A;  2GDW A;  2N98 A;  2EHS A;  1HY8 A;  2PNG A;  4H2Y C;  2EHT A;  2K0Y A;  2MF4 A;  1NQ4 A;  2LPK A;  2FAC A;  4PXH B;  2XZ1 C;  4BPG A;  5HVC A;  2FQ2 A;  4CA3 A;  4HKG A;  2FAD A;  2X2B A;  5HV8 A;  2M5R A;  5KP7 B;  3EJD A;  3EJE A;  2KOS A;  2DNW A;  3GZL A;  2KGE A;  2L0Q A;  1L0H A;  2AFD A;  1X3O A;  2VSQ A;  2N6Y A;  2KG9 A;  2FHS C;  2K0X A;  2AF8 A;  2AVA A;  1HQB A;  5KP6 B;  2KGA A;  3RG2 A;  2JGP A;  3LMO A;  1L0I A;  1DV5 A;  2MVV A;  1VKU A;  3GZM A;  2CGQ A;  2LIW A;  2FAE A;  4H2W C;  2FVE A;  2KG8 A;  3CE7 A;  4NEO A;  2GDY A;  2KGC A;  5KP8 B;  5EJD A;  2KOQ A;  1KLP A;  2KWL A;  4H2X C;  2LOL A;  2MVU A;  2LIU A;  2FVF A;  2LL8 A;  4DG9 A;  2K2Q A;  2KW2 A;  3NY7 B;  4R0M A;  2CQ8 A;  2FVA A;  2MD9 A;  2L9F A;  2N6Z A;  2QNW A;  1F80 D;  2KOP A;  2KG6 A;  2MR7 A;  1T8K A;  2N50 A;  2KR5 A;  2FQ0 A;  2CG5 B;  2ROQ A;  2MR8 A;  2KOR A;  2L22 A;  4PWV B;  1OR5 A;  4BPF A;  3EJB A;  5CZD B;  1DNY A;  2N5I A;  2AFE A;  4BPH A;  2JU1 A;  2MY5 A;  2N5H A;  2LTE A;  2JQ4 A;  2KOO A;  2K94 A;  1AF8 A;  4MRT C;  2LML A;  2XZ0 D;  2FQ1 A;  4IZ6 A;  2KGD A;  2LKI A; 
#chains in the Genus database with same CATH topology
 1UJZ A;  3DS3 A;  1ACP A;  5HGO A;  2GDW A;  4H2Y C;  4F37 A;  4PXH B;  1W2B O;  2XZ1 C;  3CCS P;  1VQ5 P;  4CA3 A;  4HKG A;  5KP7 B;  3EJD A;  4COC A;  1YHQ P;  1ZMB A;  1VQ8 P;  1L0H A;  2AFD A;  2VSQ A;  2GZF A;  2K0X A;  2JAZ A;  5KP6 B;  3CC7 P;  2EIA A;  3P05 A;  3I56 P;  2GZG A;  3LMO A;  1RNI A;  1YJN P;  2L6E A;  2NO8 A;  1VKU A;  4U0E A;  2CGQ A;  2KG8 A;  1JJ2 O;  5EW5 E;  1E0H A;  2KGC A;  2KWL A;  3HYB A;  1GXG A;  2K5X A;  1AUM A;  2MVU A;  4DG9 A;  3GJN A;  1FR2 A;  2L9F A;  3LRY A;  1RO0 A;  2KOP A;  4PH0 A;  1Q86 Q;  1K8A Q;  1KQS O;  1QVF O;  1EOQ A;  2KOR A;  4BPF A;  2M8N A;  2N5I A;  4BPH A;  3DTJ A;  4PH1 A;  2MY5 A;  1VQO P;  1CEI A;  2JQ4 A;  2K94 A;  1YI2 P;  1Z6M A;  1AF8 A;  4MRT C;  2E1M A;  2QA4 P;  2FQ1 A;  4XRQ A;  2LKI A;  3HZQ A;  2K93 A;  2CNR A;  2XT1 A;  1VQ7 P;  2ERH A;  2PEO A;  3CCQ P;  5BS2 A;  3CCU P;  2K92 A;  2KOD A;  2EFJ A;  5JPA A;  2MF4 A;  2K0Y A;  1NQ4 A;  4COP A;  4QNB A;  1KD1 Q;  3NTE A;  3G4S P;  3G26 A;  1K73 Q;  4BPG A;  3E2D A;  3DPH A;  1M6E X;  2FAD A;  1UNK A;  3DS0 A;  2KOS A;  2DNW A;  5HGL A;  1X3O A;  1VQ9 P;  2M8L A;  2FHS C;  2AF8 A;  3CD6 P;  1M74 A;  2GZI A;  1ZNV A;  3OW2 O;  2JGP A;  1VQN P;  1L0I A;  1GXH A;  2MVV A;  2LIW A;  1VQ6 P;  2FVE A;  1M6N A;  3CE7 A;  4NEO A;  3CCV P;  5KP8 B;  4XFY A;  5EJD A;  3WBH A;  2BHV A;  2LIU A;  2LL8 A;  2K2Q A;  1VHN A;  2CQ8 A;  1YIT P;  4IPY A;  2FVA A;  2VLP A;  1MZ8 A;  1F80 D;  2KG6 A;  4WYM A;  3U43 A;  4UHP B;  3G1I A;  2VLO A;  1A8O A;  3CCL P;  1DNY A;  2QEX P;  2OAR A;  5F2K A;  3CPW O;  3CME P;  3DS2 A;  2LML A;  1VQM P;  2BUO A;  3B5I A;  3DS1 A;  4IZ6 A;  1A43 A;  4U0F A;  2GDX A;  2JBG A;  2PEI A;  4U0A A;  2JU2 A;  4U0B A;  1HY8 A;  2LPK A;  1AYI A;  2K0D X;  3G28 A;  3VRL C;  7CEI A;  2FQ2 A;  2X2B A;  1S72 P;  1Q82 Q;  3GZL A;  2L0Q A;  2PEK A;  1E6J P;  3G6E P;  2N6Y A;  1HQB A;  2JO0 A;  3RG2 A;  4U0C A;  5F2N A;  3MGE A;  2PEN A;  1M90 Q;  2XV6 A;  3CMA P;  1VQL P;  1DV5 A;  4QKO A;  1IUQ A;  2FAE A;  4H2W C;  1D1D A;  2KOQ A;  2VLQ A;  4GR2 A;  4H2X C;  2LOL A;  2FVF A;  2OTL P;  5HGM A;  2KW2 A;  1EMV A;  5I4T G;  1IMQ A;  4GR6 A;  2JB0 A;  2N6Z A;  2QNW A;  5F2O A;  2MR7 A;  1T8K A;  2PEM A;  2FQ0 A;  2CG5 B;  2L22 A;  1OR5 A;  2P9X A;  3EJB A;  5CZD B;  2LF4 A;  3M1M A;  2AFE A;  2PY8 A;  2JU1 A;  2PEJ A;  2N5H A;  2JYL A;  1IMP A;  2LTE A;  1BAJ A;  2GYK A;  1NJI Q;  2DGY A;  1KC8 Q;  4XRO A;  2Z45 A;  4U0D A;  3H4E A;  2KGD A;  3DS5 A;  3G29 A;  2L4B A;  3CCJ P;  2N98 A;  2EHS A;  2PNG A;  1VQP P;  2PEQ A;  2EHT A;  2FAC A;  1N8R Q;  2M8P A;  5HVC A;  5HV8 A;  2M5R A;  1VQK P;  3EJE A;  3CCR P;  3CC2 P;  2KGE A;  3CCE P;  2ONT A;  2KG9 A;  3H47 A;  2AVA A;  3DS4 A;  2KGA A;  3G0V A;  1Q7Y Q;  1YIJ P;  4XFZ A;  2JYG A;  2VLN A;  1YJ9 P;  3CXC O;  4XFX A;  3I55 P;  3GZM A;  2Z44 A;  2GDY A;  2Z46 A;  1QRJ A;  2GZE A;  1M1K Q;  1KLP A;  3G1G A;  1GPJ A;  1QVG O;  2EG5 A;  3NY7 B;  4R0M A;  5HGN A;  3G71 P;  2MD9 A;  2OTJ P;  3GKL C;  1Q81 Q;  1BXI A;  3G21 A;  5DCK A;  1K9M Q;  3RG6 C;  2N50 A;  1VQ4 P;  2KR5 A;  2ROQ A;  2MR8 A;  4M0I A;  4PWV B;  1EIA A;  3CCM P;  1YJW P;  1K30 A;  2KOO A;  2GZJ A;  3CC4 P;  1RO2 A;  2CWO A;  5BS1 A;  2XXM A;  2WPT A;  3B4Q A;  3H0D A;  3Q20 A;  2XZ0 D; 
#chains in the Genus database with same CATH homology
 2K93 A;  2CNR A;  2GDX A;  2JU2 A;  1ACP A;  2L4B A;  2K92 A;  2GDW A;  2N98 A;  2EHS A;  1HY8 A;  2PNG A;  4H2Y C;  2EHT A;  2K0Y A;  2MF4 A;  1NQ4 A;  2LPK A;  2FAC A;  4PXH B;  2XZ1 C;  4BPG A;  5HVC A;  2FQ2 A;  4CA3 A;  4HKG A;  2FAD A;  2X2B A;  5HV8 A;  2M5R A;  5KP7 B;  3EJD A;  3EJE A;  2KOS A;  2DNW A;  3GZL A;  2KGE A;  2L0Q A;  1L0H A;  2AFD A;  1X3O A;  2VSQ A;  2N6Y A;  2KG9 A;  2FHS C;  2K0X A;  2AF8 A;  2AVA A;  1HQB A;  5KP6 B;  2KGA A;  3RG2 A;  2JGP A;  3LMO A;  1L0I A;  1DV5 A;  2MVV A;  1VKU A;  3GZM A;  2CGQ A;  2LIW A;  2FAE A;  4H2W C;  2FVE A;  2KG8 A;  3CE7 A;  4NEO A;  2GDY A;  2KGC A;  5KP8 B;  5EJD A;  2KOQ A;  1KLP A;  2KWL A;  4H2X C;  2LOL A;  2MVU A;  2LIU A;  2FVF A;  2LL8 A;  4DG9 A;  2K2Q A;  2KW2 A;  3NY7 B;  4R0M A;  2CQ8 A;  2FVA A;  2MD9 A;  2L9F A;  2N6Z A;  2QNW A;  1F80 D;  2KOP A;  2KG6 A;  2MR7 A;  1T8K A;  2N50 A;  2KR5 A;  2FQ0 A;  2CG5 B;  2ROQ A;  2MR8 A;  2KOR A;  2L22 A;  4PWV B;  1OR5 A;  4BPF A;  3EJB A;  5CZD B;  1DNY A;  2N5I A;  2AFE A;  4BPH A;  2JU1 A;  2MY5 A;  2N5H A;  2LTE A;  2JQ4 A;  2KOO A;  2K94 A;  1AF8 A;  4MRT C;  2LML A;  2XZ0 D;  2FQ1 A;  4IZ6 A;  2KGD A;  2LKI A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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