2K0YA

The actinorhodin apo acyl carrier protein from s. coelicolor
Total Genus 28
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
28
sequence length
86
structure length
86
Chain Sequence
b'MATLLTTDDLRRALVESAGETDGTDLSGDFLDLRFEDIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLINGALAEAA'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Actinorhodin polyketide synthase acyl carrier protein
publication title An ACP Structural Switch: Conformational Differences between the Apo and Holo Forms of the Actinorhodin Polyketide Synthase Acyl Carrier Protein.
pubmed doi rcsb
source organism Streptomyces coelicolor
molecule tags Transport protein
total genus 28
structure length 86
sequence length 86
ec nomenclature
pdb deposition date 2008-02-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2k0yA00
1F80D 4BPFA 2ROQA 3GZLA 4IZ6A 1L0HA 2KOQA 3EJDA 2FVFA 2K2QA 2L4BA 5KP8B 2FACA 2VSQA 2N6ZA 2GDYA 2XZ0D 3RG2A 4R0MA 2MR7A 3GZMA 1T8KA 2KWLA 2K0YA 2KW2A 2FAEA 2FHSC 1X3OA 1VKUA 4DG9A 2JGPA 3NY7B 3EJEA 2AF8A 4BPHA 1OR5A 2N98A 4BPGA 2LIWA 2LOLA 2EHTA 2LPKA 2KGEA 2KG6A 2FQ1A 2N5HA 1DNYA 5HV8A 2FVEA 2FQ2A 2MVVA 2KORA 5CZDB 3CE7A 2KG9A 2JQ4A 2QNWA 2FADA 1HQBA 2KGAA 2LKIA 4MRTC 4PWVB 2CG5B 2JU2A 2LMLA 2K0XA 2MR8A 4PXHB 2CGQA 3LMOA 2N5IA 2K93A 2M5RA 2KOSA 2XZ1C 2KOPA 4CA3A 5KP6B 2AFDA 1KLPA 2GDWA 2PNGA 4H2WC 5EJDA 2CQ8A 2K94A 5HVCA 2AFEA 2N6YA 2KR5A 2L9FA 4H2XC 3EJBA 2MVUA 2EHSA 4H2YC 2MY5A 2LIUA 1L0IA 2KGDA 5KP7B 1NQ4A 2LL8A 1DV5A 2KG8A 1AF8A 2GDXA 2JU1A 2CNRA 2DNWA 2FQ0A 2X2BA 2FVAA 4HKGA 2L0QA 2MD9A 2N50A 1HY8A 4NEOA 2MF4A 2KOOA 2K92A 2L22A 2LTEA 1ACPA 2AVAA 2KGCA
chains in the Genus database with same CATH superfamily
1F80D 3CCUP 4XROA 2ROQA 3CCMP 1KQSO 1L0HA 2K5XA 3NTEA 5I4TG 3RG2A 1Q81Q 1K9MQ 1GPJA 2MR7A 1RO2A 3G26A 3CCVP 2K0YA 1K30A 4GR6A 1VKUA 3DS5A 2BUOA 1EOQA 1UJZA 2PEMA 5JPAA 2LIWA 1KD1Q 1GXGA 1DNYA 2CWOA 3H47A 4WYMA 5CZDB 3CE7A 2KG9A 3DPHA 1K8AQ 2QNWA 1HQBA 2LKIA 2JU2A 2LMLA 2VLOA 3GJNA 3LMOA 2K93A 2JBGA 5HGMA 2QEXP 2EFJA 3G28A 3E2DA 2AFDA 1D1DA 2GDWA 1W2BO 5EJDA 1YIJP 2VLNA 2GYKA 3CCQP 2K94A 1E6JP 2EG5A 2MVUA 1IMQA 1L0IA 1NQ4A 1ZMBA 2LL8A 2KG8A 2GDXA 2JU1A 3H4EA 2E1MA 2FQ0A 3VRLC 2KOOA 1VQNP 4F37A 2LTEA 3CCSP 1M6EX 3LRYA 2XV6A 4BPFA 2LF4A 2K0DX 1K73Q 3DTJA 3EJDA 3CCRP 2PEOA 2K2QA 2FACA 2VLPA 2XZ0D 4XFZA 5HGNA 1Q7YQ 1VQ8P 2KW2A 2FHSC 1X3OA 5DCKA 1QRJA 3GKLC 3NY7B 1RNIA 2AF8A 4BPHA 3CCLP 1OR5A 2N98A 3G4SP 1IUQA 3I56P 2WPTA 2LOLA 2EHTA 4GR2A 2N5HA 2FVEA 3CC4P 2FADA 4MRTC 1YITP 2GZIA 1IMPA 2CG5B 1VQ7P 2PY8A 2MR8A 3MGEA 4QNBA 4PXHB 3I55P 2N5IA 2M5RA 2JB0A 4CA3A 2JYLA 3G6EP 1KLPA 2PNGA 1VQ9P 1QVFO 3CC2P 1VQKP 1AYIA 1RO0A 1YJWP 1BAJA 2N6YA 2KR5A 2L9FA 3EJBA 1E0HA 2MY5A 1M1KQ 2QA4P 2LIUA 5KP7B 1DV5A 2JO0A 1Q82Q 3DS3A 2DNWA 3CMEP 4XRQA 1NJIQ 4COPA 2N50A 4NEOA 2MF4A 2K92A 3H0DA 3U43A 2KGCA 4XFYA 3HZQA 1YI2P 2M8PA 3OW2O 4IZ6A 1A8OA 1EMVA 1VQPP 5KP8B 2VSQA 2GDYA 5EW5E 5F2KA 5BS1A 3G21A 3HYBA 4R0MA 2VLQA 3G71P 2KWLA 2Z46A 4XFXA 2OARA 1Q86Q 2OTLP 2JGPA 3EJEA 5HGLA 1AUMA 4U0AA 4U0BA 2EIAA 1VQ5P 1KC8Q 3WBHA 2LPKA 2KGEA 2KG6A 2FQ1A 4U0DA 3RG6C 1Z6MA 2FQ2A 1YJNP 3DS2A 2KGAA 3G0VA 4PWVB 1N8RQ 3M1MA 2GZFA 7CEIA 2M8LA 2L6EA 1CEIA 5KP6B 2BHVA 2GZEA 4H2WC 5F2OA 1M90Q 2CQ8A 5HVCA 5F2NA 4H2XC 2Z44A 1MZ8A 2EHSA 2JYGA 2PEQA 2XT1A 2KGDA 3DS1A 1AF8A 1GXHA 2CNRA 2X2BA 2L0QA 2MD9A 4QKOA 4COCA 1HY8A 3CC7P 2L22A 1ACPA 1BXIA 4U0EA 4M0IA 1FR2A 3G29A 2NO8A 2ONTA 3GZLA 1M6NA 2M8NA 2KOQA 4UHPB 2FVFA 2PEJA 2L4BA 2N6ZA 3CXCO 2ERHA 2PENA 3DS0A 3CCJP 3GZMA 1VHNA 1T8KA 1M74A 2FAEA 1ZNVA 2P9XA 4U0CA 2GZGA 4DG9A 1S72P 4BPGA 1VQ4P 4IPYA 1YHQP 5HV8A 3CD6P 2MVVA 2KORA 1JJ2O 2JQ4A 1A43A 2K0XA 2CGQA 4U0FA 3CCEP 3Q20A 1VQMP 2KOSA 5HGOA 3B5IA 2XZ1C 4PH0A 2KOPA 3G1IA 2XXMA 3B4QA 3G1GA 3DS4A 3CMAP 3P05A 2KODA 2AFEA 1VQ6P 2PEKA 4H2YC 4PH1A 1VQLP 1YJ9P 2OTJP 1VQOP 2FVAA 3CPWO 4HKGA 2Z45A 1UNKA 1QVGO 5BS2A 2DGYA 2GZJA 2JAZA 2AVAA 1EIAA 2PEIA
chains in the Genus database with same CATH topology
1F80D 4BPFA 2ROQA 3GZLA 4IZ6A 1L0HA 2KOQA 3EJDA 2FVFA 2K2QA 2L4BA 5KP8B 2FACA 2VSQA 2N6ZA 2GDYA 2XZ0D 3RG2A 4R0MA 2MR7A 3GZMA 1T8KA 2KWLA 2K0YA 2KW2A 2FAEA 2FHSC 1X3OA 1VKUA 4DG9A 2JGPA 3NY7B 3EJEA 2AF8A 4BPHA 1OR5A 2N98A 4BPGA 2LIWA 2LOLA 2EHTA 2LPKA 2KGEA 2KG6A 2FQ1A 2N5HA 1DNYA 5HV8A 2FVEA 2FQ2A 2MVVA 2KORA 5CZDB 3CE7A 2KG9A 2JQ4A 2QNWA 2FADA 1HQBA 2KGAA 2LKIA 4MRTC 4PWVB 2CG5B 2JU2A 2LMLA 2K0XA 2MR8A 4PXHB 2CGQA 3LMOA 2N5IA 2K93A 2M5RA 2KOSA 2XZ1C 2KOPA 4CA3A 5KP6B 2AFDA 1KLPA 2GDWA 2PNGA 4H2WC 5EJDA 2CQ8A 2K94A 5HVCA 2AFEA 2N6YA 2KR5A 2L9FA 4H2XC 3EJBA 2MVUA 2EHSA 4H2YC 2MY5A 2LIUA 1L0IA 2KGDA 5KP7B 1NQ4A 2LL8A 1DV5A 2KG8A 1AF8A 2GDXA 2JU1A 2CNRA 2DNWA 2FQ0A 2X2BA 2FVAA 4HKGA 2L0QA 2MD9A 2N50A 1HY8A 4NEOA 2MF4A 2KOOA 2K92A 2L22A 2LTEA 1ACPA 2AVAA 2KGCA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1F80 D;  4BPF A;  2ROQ A;  3GZL A;  4IZ6 A;  1L0H A;  2KOQ A;  3EJD A;  2FVF A;  2K2Q A;  2L4B A;  5KP8 B;  2FAC A;  2VSQ A;  2N6Z A;  2GDY A;  2XZ0 D;  3RG2 A;  4R0M A;  2MR7 A;  3GZM A;  1T8K A;  2KWL A;  2K0Y A;  2KW2 A;  2FAE A;  2FHS C;  1X3O A;  1VKU A;  4DG9 A;  2JGP A;  3NY7 B;  3EJE A;  2AF8 A;  4BPH A;  1OR5 A;  2N98 A;  4BPG A;  2LIW A;  2LOL A;  2EHT A;  2LPK A;  2KGE A;  2KG6 A;  2FQ1 A;  2N5H A;  1DNY A;  5HV8 A;  2FVE A;  2FQ2 A;  2MVV A;  2KOR A;  5CZD B;  3CE7 A;  2KG9 A;  2JQ4 A;  2QNW A;  2FAD A;  1HQB A;  2KGA A;  2LKI A;  4MRT C;  4PWV B;  2CG5 B;  2JU2 A;  2LML A;  2K0X A;  2MR8 A;  4PXH B;  2CGQ A;  3LMO A;  2N5I A;  2K93 A;  2M5R A;  2KOS A;  2XZ1 C;  2KOP A;  4CA3 A;  5KP6 B;  2AFD A;  1KLP A;  2GDW A;  2PNG A;  4H2W C;  5EJD A;  2CQ8 A;  2K94 A;  5HVC A;  2AFE A;  2N6Y A;  2KR5 A;  2L9F A;  4H2X C;  3EJB A;  2MVU A;  2EHS A;  4H2Y C;  2MY5 A;  2LIU A;  1L0I A;  2KGD A;  5KP7 B;  1NQ4 A;  2LL8 A;  1DV5 A;  2KG8 A;  1AF8 A;  2GDX A;  2JU1 A;  2CNR A;  2DNW A;  2FQ0 A;  2X2B A;  2FVA A;  4HKG A;  2L0Q A;  2MD9 A;  2N50 A;  1HY8 A;  4NEO A;  2MF4 A;  2KOO A;  2K92 A;  2L22 A;  2LTE A;  1ACP A;  2AVA A;  2KGC A; 
#chains in the Genus database with same CATH topology
 1F80 D;  3CCU P;  4XRO A;  2ROQ A;  3CCM P;  1KQS O;  1L0H A;  2K5X A;  3NTE A;  5I4T G;  3RG2 A;  1Q81 Q;  1K9M Q;  1GPJ A;  2MR7 A;  1RO2 A;  3G26 A;  3CCV P;  2K0Y A;  1K30 A;  4GR6 A;  1VKU A;  3DS5 A;  2BUO A;  1EOQ A;  1UJZ A;  2PEM A;  5JPA A;  2LIW A;  1KD1 Q;  1GXG A;  1DNY A;  2CWO A;  3H47 A;  4WYM A;  5CZD B;  3CE7 A;  2KG9 A;  3DPH A;  1K8A Q;  2QNW A;  1HQB A;  2LKI A;  2JU2 A;  2LML A;  2VLO A;  3GJN A;  3LMO A;  2K93 A;  2JBG A;  5HGM A;  2QEX P;  2EFJ A;  3G28 A;  3E2D A;  2AFD A;  1D1D A;  2GDW A;  1W2B O;  5EJD A;  1YIJ P;  2VLN A;  2GYK A;  3CCQ P;  2K94 A;  1E6J P;  2EG5 A;  2MVU A;  1IMQ A;  1L0I A;  1NQ4 A;  1ZMB A;  2LL8 A;  2KG8 A;  2GDX A;  2JU1 A;  3H4E A;  2E1M A;  2FQ0 A;  3VRL C;  2KOO A;  1VQN P;  4F37 A;  2LTE A;  3CCS P;  1M6E X;  3LRY A;  2XV6 A;  4BPF A;  2LF4 A;  2K0D X;  1K73 Q;  3DTJ A;  3EJD A;  3CCR P;  2PEO A;  2K2Q A;  2FAC A;  2VLP A;  2XZ0 D;  4XFZ A;  5HGN A;  1Q7Y Q;  1VQ8 P;  2KW2 A;  2FHS C;  1X3O A;  5DCK A;  1QRJ A;  3GKL C;  3NY7 B;  1RNI A;  2AF8 A;  4BPH A;  3CCL P;  1OR5 A;  2N98 A;  3G4S P;  1IUQ A;  3I56 P;  2WPT A;  2LOL A;  2EHT A;  4GR2 A;  2N5H A;  2FVE A;  3CC4 P;  2FAD A;  4MRT C;  1YIT P;  2GZI A;  1IMP A;  2CG5 B;  1VQ7 P;  2PY8 A;  2MR8 A;  3MGE A;  4QNB A;  4PXH B;  3I55 P;  2N5I A;  2M5R A;  2JB0 A;  4CA3 A;  2JYL A;  3G6E P;  1KLP A;  2PNG A;  1VQ9 P;  1QVF O;  3CC2 P;  1VQK P;  1AYI A;  1RO0 A;  1YJW P;  1BAJ A;  2N6Y A;  2KR5 A;  2L9F A;  3EJB A;  1E0H A;  2MY5 A;  1M1K Q;  2QA4 P;  2LIU A;  5KP7 B;  1DV5 A;  2JO0 A;  1Q82 Q;  3DS3 A;  2DNW A;  3CME P;  4XRQ A;  1NJI Q;  4COP A;  2N50 A;  4NEO A;  2MF4 A;  2K92 A;  3H0D A;  3U43 A;  2KGC A;  4XFY A;  3HZQ A;  1YI2 P;  2M8P A;  3OW2 O;  4IZ6 A;  1A8O A;  1EMV A;  1VQP P;  5KP8 B;  2VSQ A;  2GDY A;  5EW5 E;  5F2K A;  5BS1 A;  3G21 A;  3HYB A;  4R0M A;  2VLQ A;  3G71 P;  2KWL A;  2Z46 A;  4XFX A;  2OAR A;  1Q86 Q;  2OTL P;  2JGP A;  3EJE A;  5HGL A;  1AUM A;  4U0A A;  4U0B A;  2EIA A;  1VQ5 P;  1KC8 Q;  3WBH A;  2LPK A;  2KGE A;  2KG6 A;  2FQ1 A;  4U0D A;  3RG6 C;  1Z6M A;  2FQ2 A;  1YJN P;  3DS2 A;  2KGA A;  3G0V A;  4PWV B;  1N8R Q;  3M1M A;  2GZF A;  7CEI A;  2M8L A;  2L6E A;  1CEI A;  5KP6 B;  2BHV A;  2GZE A;  4H2W C;  5F2O A;  1M90 Q;  2CQ8 A;  5HVC A;  5F2N A;  4H2X C;  2Z44 A;  1MZ8 A;  2EHS A;  2JYG A;  2PEQ A;  2XT1 A;  2KGD A;  3DS1 A;  1AF8 A;  1GXH A;  2CNR A;  2X2B A;  2L0Q A;  2MD9 A;  4QKO A;  4COC A;  1HY8 A;  3CC7 P;  2L22 A;  1ACP A;  1BXI A;  4U0E A;  4M0I A;  1FR2 A;  3G29 A;  2NO8 A;  2ONT A;  3GZL A;  1M6N A;  2M8N A;  2KOQ A;  4UHP B;  2FVF A;  2PEJ A;  2L4B A;  2N6Z A;  3CXC O;  2ERH A;  2PEN A;  3DS0 A;  3CCJ P;  3GZM A;  1VHN A;  1T8K A;  1M74 A;  2FAE A;  1ZNV A;  2P9X A;  4U0C A;  2GZG A;  4DG9 A;  1S72 P;  4BPG A;  1VQ4 P;  4IPY A;  1YHQ P;  5HV8 A;  3CD6 P;  2MVV A;  2KOR A;  1JJ2 O;  2JQ4 A;  1A43 A;  2K0X A;  2CGQ A;  4U0F A;  3CCE P;  3Q20 A;  1VQM P;  2KOS A;  5HGO A;  3B5I A;  2XZ1 C;  4PH0 A;  2KOP A;  3G1I A;  2XXM A;  3B4Q A;  3G1G A;  3DS4 A;  3CMA P;  3P05 A;  2KOD A;  2AFE A;  1VQ6 P;  2PEK A;  4H2Y C;  4PH1 A;  1VQL P;  1YJ9 P;  2OTJ P;  1VQO P;  2FVA A;  3CPW O;  4HKG A;  2Z45 A;  1UNK A;  1QVG O;  5BS2 A;  2DGY A;  2GZJ A;  2JAZ A;  2AVA A;  1EIA A;  2PEI A; 
#chains in the Genus database with same CATH homology
 1F80 D;  4BPF A;  2ROQ A;  3GZL A;  4IZ6 A;  1L0H A;  2KOQ A;  3EJD A;  2FVF A;  2K2Q A;  2L4B A;  5KP8 B;  2FAC A;  2VSQ A;  2N6Z A;  2GDY A;  2XZ0 D;  3RG2 A;  4R0M A;  2MR7 A;  3GZM A;  1T8K A;  2KWL A;  2K0Y A;  2KW2 A;  2FAE A;  2FHS C;  1X3O A;  1VKU A;  4DG9 A;  2JGP A;  3NY7 B;  3EJE A;  2AF8 A;  4BPH A;  1OR5 A;  2N98 A;  4BPG A;  2LIW A;  2LOL A;  2EHT A;  2LPK A;  2KGE A;  2KG6 A;  2FQ1 A;  2N5H A;  1DNY A;  5HV8 A;  2FVE A;  2FQ2 A;  2MVV A;  2KOR A;  5CZD B;  3CE7 A;  2KG9 A;  2JQ4 A;  2QNW A;  2FAD A;  1HQB A;  2KGA A;  2LKI A;  4MRT C;  4PWV B;  2CG5 B;  2JU2 A;  2LML A;  2K0X A;  2MR8 A;  4PXH B;  2CGQ A;  3LMO A;  2N5I A;  2K93 A;  2M5R A;  2KOS A;  2XZ1 C;  2KOP A;  4CA3 A;  5KP6 B;  2AFD A;  1KLP A;  2GDW A;  2PNG A;  4H2W C;  5EJD A;  2CQ8 A;  2K94 A;  5HVC A;  2AFE A;  2N6Y A;  2KR5 A;  2L9F A;  4H2X C;  3EJB A;  2MVU A;  2EHS A;  4H2Y C;  2MY5 A;  2LIU A;  1L0I A;  2KGD A;  5KP7 B;  1NQ4 A;  2LL8 A;  1DV5 A;  2KG8 A;  1AF8 A;  2GDX A;  2JU1 A;  2CNR A;  2DNW A;  2FQ0 A;  2X2B A;  2FVA A;  4HKG A;  2L0Q A;  2MD9 A;  2N50 A;  1HY8 A;  4NEO A;  2MF4 A;  2KOO A;  2K92 A;  2L22 A;  2LTE A;  1ACP A;  2AVA A;  2KGC A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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