2K0YA

The actinorhodin apo acyl carrier protein from s. coelicolor
Total Genus 28
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
28
sequence length
86
structure length
86
Chain Sequence
MATLLTTDDLRRALVESAGETDGTDLSGDFLDLRFEDIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLINGALAEAA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transport protein
source organism Streptomyces coelicolor
publication title An ACP Structural Switch: Conformational Differences between the Apo and Holo Forms of the Actinorhodin Polyketide Synthase Acyl Carrier Protein.
pubmed doi rcsb
molecule keywords Actinorhodin polyketide synthase acyl carrier protein
total genus 28
structure length 86
sequence length 86
ec nomenclature
pdb deposition date 2008-02-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2k0yA00
2FADA 2AVAA 2N98A 2L4BA 4NEOA 5KP6B 2LIUA 1DNYA 2KGCA 2JGPA 2KOOA 3EJBA 2KG6A 2KW2A 5HV8A 1T8KA 2MY5A 2K92A 2MD9A 2K0XA 2MR7A 2PNGA 4HKGA 4PXHB 2JQ4A 2GDXA 2KGAA 2FVAA 2MVUA 2JU1A 2LPKA 2LMLA 3GZLA 4CA3A 4IZ6A 1NQ4A 2QNWA 2L9FA 2L22A 2N5HA 2LL8A 2N6YA 1F80D 1ACPA 2LIWA 2N5IA 2EHTA 2L0QA 2KG8A 1OR5A 1HQBA 2FACA 4R0MA 1X3OA 2AFEA 2KOSA 4H2WC 1KLPA 3EJDA 2KG9A 4H2YC 3LMOA 4MRTC 2AFDA 2KOPA 3GZMA 5KP7B 4BPFA 2CNRA 4H2XC 2X2BA 4DG9A 2VSQA 2K2QA 2EHSA 2CQ8A 2N50A 2KORA 2FVEA 3RG2A 4BPHA 3NY7B 1L0HA 2XZ1C 2MF4A 2FQ2A 1VKUA 2LKIA 2KOQA 1HY8A 1DV5A 2N6ZA 2FVFA 2FQ1A 2DNWA 2AF8A 2LTEA 2CGQA 2K94A 2XZ0D 5HVCA 2KR5A 2GDWA 2GDYA 3EJEA 2K93A 2KWLA 2FHSC 5KP8B 2CG5B 2JU2A 2MVVA 5CZDB 5EJDA 2MR8A 4BPGA 3CE7A 2KGDA 1L0IA 2K0YA 2KGEA 2M5RA 2LOLA 2ROQA 4PWVB 1AF8A 2FQ0A 2FAEA
chains in the Genus database with same CATH superfamily
2FADA 5KP6B 2LIUA 2PEOA 3G26A 2KOOA 2KW2A 2JYGA 3DS4A 2K0XA 4HKGA 4PXHB 1AUMA 1VQ8P 2LPKA 1Q82Q 3CCLP 3GZLA 1ZMBA 5F2OA 5F2KA 2XXMA 3I55P 1VQKP 2JO0A 4U0FA 3G4SP 1NQ4A 1YITP 2PY8A 3Q20A 1UJZA 2LL8A 2N6YA 1ACPA 5BS2A 5F2NA 4XFYA 2KG9A 2QEXP 2PEMA 2AFDA 2KOPA 3GZMA 5KP7B 1GPJA 3DS5A 3DS1A 2M8NA 2XV6A 3CCRP 2CQ8A 2N50A 3CC7P 2FVEA 3RG2A 3H0DA 2MF4A 3CPWO 4WYMA 1RO2A 3H47A 2LTEA 4COCA 2CGQA 2KODA 4GR6A 5HVCA 1UNKA 3H4EA 4U0EA 2KWLA 3U43A 2JU2A 5EJDA 1YHQP 4BPGA 3CE7A 2KGEA 1KD1Q 3DS3A 4U0BA 2ROQA 4PWVB 5HGLA 3CCJP 2K5XA 2N98A 2JGPA 3CMAP 1VHNA 2JB0A 2VLNA 2K92A 2MD9A 2MR7A 1D1DA 3G21A 2JQ4A 1GXGA 3CXCO 2KGAA 2CWOA 1GXHA 3DS0A 2VLQA 1YJWP 2OTJP 2QA4P 2JYLA 1KC8Q 4U0AA 3G1GA 4UHPB 1A43A 4IPYA 3DPHA 2N5HA 1BXIA 3CCEP 3GJNA 2LIWA 1BAJA 1EMVA 2FACA 4R0MA 7CEIA 2KOSA 4H2WC 4H2YC 4U0DA 2M8PA 2OARA 4MRTC 1VQ9P 1E0HA 1ZNVA 1VQ4P 1M6EX 2GZEA 2CNRA 2OTLP 2K2QA 1K30A 3CCQP 1K73Q 4PH0A 1QRJA 3HZQA 1L0HA 2FQ2A 1VQPP 3WBHA 3G29A 3DTJA 2FVFA 2FQ1A 5I4TG 2K94A 2GDWA 1AYIA 2VLOA 5HGNA 2ONTA 1VQNP 2FHSC 1N8RQ 2CG5B 2MVVA 5CZDB 2PENA 3B4QA 1K8AQ 1YI2P 3GKLC 2EG5A 3G6EP 1AF8A 4M0IA 2FAEA 2DGYA 1MZ8A 3CC4P 2L4BA 1DNYA 2KGCA 2BHVA 3EJBA 2KG6A 1T8KA 2MY5A 2PNGA 1K9MQ 2GZFA 3CCVP 1M1KQ 2GDXA 2GZIA 2PEKA 1VQ7P 2LF4A 3CCSP 2MVUA 2JU1A 2LMLA 1JJ2O 2BUOA 2QNWA 1RO0A 3I56P 2GZGA 3NTEA 1F80D 4COPA 3G71P 2Z46A 3DS2A 2EHTA 2L0QA 4PH1A 1EIAA 1X3OA 2Z44A 3MGEA 1IMPA 1KLPA 3EJDA 5JPAA 3B5IA 3LMOA 1Q86Q 3E2DA 2PEQA 5DCKA 4DG9A 2VSQA 4XFZA 5BS1A 1M74A 2EHSA 2KORA 1KQSO 4BPHA 3NY7B 2XZ1C 2LKIA 1S72P 2DNWA 3RG6C 2Z45A 2GDYA 3EJEA 2K93A 2K0DX 1YJ9P 4U0CA 2GZJA 2VLPA 1M6NA 1M90Q 1IMQA 2LOLA 4GR2A 1FR2A 2AVAA 4NEOA 4XFXA 5HV8A 2WPTA 2GYKA 3M1MA 1A8OA 5EW5E 1IUQA 1YIJP 2FVAA 1VQOP 3P05A 4CA3A 4IZ6A 4F37A 2L9FA 1VQLP 2L22A 5HGOA 2N5IA 4QNBA 3CD6P 3G1IA 2KG8A 1OR5A 1HQBA 4XRQA 2AFEA 3LRYA 1E6JP 4BPFA 3HYBA 4H2XC 2X2BA 1NJIQ 1CEIA 3CCUP 3VRLC 1Q81Q 3G28A 2PEJA 3G0VA 3CCMP 1QVGO 1VKUA 1VQ6P 1VQ5P 2KOQA 3CMEP 1HY8A 1DV5A 1Z6MA 2N6ZA 2NO8A 1VQMP 2AF8A 3CC2P 5HGMA 2PEIA 2XZ0D 2JBGA 1W2BO 2KR5A 2JAZA 1Q7YQ 2L6EA 2EIAA 3OW2O 4XROA 5KP8B 2M8LA 4QKOA 2P9XA 2ERHA 1YJNP 2EFJA 2MR8A 1RNIA 1QVFO 2KGDA 1L0IA 2K0YA 2E1MA 2M5RA 2XT1A 1EOQA 2FQ0A
chains in the Genus database with same CATH topology
2FADA 2AVAA 2N98A 2L4BA 4NEOA 5KP6B 2LIUA 1DNYA 2KGCA 2JGPA 2KOOA 3EJBA 2KG6A 2KW2A 5HV8A 1T8KA 2MY5A 2K92A 2MD9A 2K0XA 2MR7A 2PNGA 4HKGA 4PXHB 2JQ4A 2GDXA 2KGAA 2FVAA 2MVUA 2JU1A 2LPKA 2LMLA 3GZLA 4CA3A 4IZ6A 1NQ4A 2QNWA 2L9FA 2L22A 2N5HA 2LL8A 2N6YA 1F80D 1ACPA 2LIWA 2N5IA 2EHTA 2L0QA 2KG8A 1OR5A 1HQBA 2FACA 4R0MA 1X3OA 2AFEA 2KOSA 4H2WC 1KLPA 3EJDA 2KG9A 4H2YC 3LMOA 4MRTC 2AFDA 2KOPA 3GZMA 5KP7B 4BPFA 2CNRA 4H2XC 2X2BA 4DG9A 2VSQA 2K2QA 2EHSA 2CQ8A 2N50A 2KORA 2FVEA 3RG2A 4BPHA 3NY7B 1L0HA 2XZ1C 2MF4A 2FQ2A 1VKUA 2LKIA 2KOQA 1HY8A 1DV5A 2N6ZA 2FVFA 2FQ1A 2DNWA 2AF8A 2LTEA 2CGQA 2K94A 2XZ0D 5HVCA 2KR5A 2GDWA 2GDYA 3EJEA 2K93A 2KWLA 2FHSC 5KP8B 2CG5B 2JU2A 2MVVA 5CZDB 5EJDA 2MR8A 4BPGA 3CE7A 2KGDA 1L0IA 2K0YA 2KGEA 2M5RA 2LOLA 2ROQA 4PWVB 1AF8A 2FQ0A 2FAEA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2FAD A;  2AVA A;  2N98 A;  2L4B A;  4NEO A;  5KP6 B;  2LIU A;  1DNY A;  2KGC A;  2JGP A;  2KOO A;  3EJB A;  2KG6 A;  2KW2 A;  5HV8 A;  1T8K A;  2MY5 A;  2K92 A;  2MD9 A;  2K0X A;  2MR7 A;  2PNG A;  4HKG A;  4PXH B;  2JQ4 A;  2GDX A;  2KGA A;  2FVA A;  2MVU A;  2JU1 A;  2LPK A;  2LML A;  3GZL A;  4CA3 A;  4IZ6 A;  1NQ4 A;  2QNW A;  2L9F A;  2L22 A;  2N5H A;  2LL8 A;  2N6Y A;  1F80 D;  1ACP A;  2LIW A;  2N5I A;  2EHT A;  2L0Q A;  2KG8 A;  1OR5 A;  1HQB A;  2FAC A;  4R0M A;  1X3O A;  2AFE A;  2KOS A;  4H2W C;  1KLP A;  3EJD A;  2KG9 A;  4H2Y C;  3LMO A;  4MRT C;  2AFD A;  2KOP A;  3GZM A;  5KP7 B;  4BPF A;  2CNR A;  4H2X C;  2X2B A;  4DG9 A;  2VSQ A;  2K2Q A;  2EHS A;  2CQ8 A;  2N50 A;  2KOR A;  2FVE A;  3RG2 A;  4BPH A;  3NY7 B;  1L0H A;  2XZ1 C;  2MF4 A;  2FQ2 A;  1VKU A;  2LKI A;  2KOQ A;  1HY8 A;  1DV5 A;  2N6Z A;  2FVF A;  2FQ1 A;  2DNW A;  2AF8 A;  2LTE A;  2CGQ A;  2K94 A;  2XZ0 D;  5HVC A;  2KR5 A;  2GDW A;  2GDY A;  3EJE A;  2K93 A;  2KWL A;  2FHS C;  5KP8 B;  2CG5 B;  2JU2 A;  2MVV A;  5CZD B;  5EJD A;  2MR8 A;  4BPG A;  3CE7 A;  2KGD A;  1L0I A;  2K0Y A;  2KGE A;  2M5R A;  2LOL A;  2ROQ A;  4PWV B;  1AF8 A;  2FQ0 A;  2FAE A; 
#chains in the Genus database with same CATH topology
 2FAD A;  5KP6 B;  2LIU A;  2PEO A;  3G26 A;  2KOO A;  2KW2 A;  2JYG A;  3DS4 A;  2K0X A;  4HKG A;  4PXH B;  1AUM A;  1VQ8 P;  2LPK A;  1Q82 Q;  3CCL P;  3GZL A;  1ZMB A;  5F2O A;  5F2K A;  2XXM A;  3I55 P;  1VQK P;  2JO0 A;  4U0F A;  3G4S P;  1NQ4 A;  1YIT P;  2PY8 A;  3Q20 A;  1UJZ A;  2LL8 A;  2N6Y A;  1ACP A;  5BS2 A;  5F2N A;  4XFY A;  2KG9 A;  2QEX P;  2PEM A;  2AFD A;  2KOP A;  3GZM A;  5KP7 B;  1GPJ A;  3DS5 A;  3DS1 A;  2M8N A;  2XV6 A;  3CCR P;  2CQ8 A;  2N50 A;  3CC7 P;  2FVE A;  3RG2 A;  3H0D A;  2MF4 A;  3CPW O;  4WYM A;  1RO2 A;  3H47 A;  2LTE A;  4COC A;  2CGQ A;  2KOD A;  4GR6 A;  5HVC A;  1UNK A;  3H4E A;  4U0E A;  2KWL A;  3U43 A;  2JU2 A;  5EJD A;  1YHQ P;  4BPG A;  3CE7 A;  2KGE A;  1KD1 Q;  3DS3 A;  4U0B A;  2ROQ A;  4PWV B;  5HGL A;  3CCJ P;  2K5X A;  2N98 A;  2JGP A;  3CMA P;  1VHN A;  2JB0 A;  2VLN A;  2K92 A;  2MD9 A;  2MR7 A;  1D1D A;  3G21 A;  2JQ4 A;  1GXG A;  3CXC O;  2KGA A;  2CWO A;  1GXH A;  3DS0 A;  2VLQ A;  1YJW P;  2OTJ P;  2QA4 P;  2JYL A;  1KC8 Q;  4U0A A;  3G1G A;  4UHP B;  1A43 A;  4IPY A;  3DPH A;  2N5H A;  1BXI A;  3CCE P;  3GJN A;  2LIW A;  1BAJ A;  1EMV A;  2FAC A;  4R0M A;  7CEI A;  2KOS A;  4H2W C;  4H2Y C;  4U0D A;  2M8P A;  2OAR A;  4MRT C;  1VQ9 P;  1E0H A;  1ZNV A;  1VQ4 P;  1M6E X;  2GZE A;  2CNR A;  2OTL P;  2K2Q A;  1K30 A;  3CCQ P;  1K73 Q;  4PH0 A;  1QRJ A;  3HZQ A;  1L0H A;  2FQ2 A;  1VQP P;  3WBH A;  3G29 A;  3DTJ A;  2FVF A;  2FQ1 A;  5I4T G;  2K94 A;  2GDW A;  1AYI A;  2VLO A;  5HGN A;  2ONT A;  1VQN P;  2FHS C;  1N8R Q;  2CG5 B;  2MVV A;  5CZD B;  2PEN A;  3B4Q A;  1K8A Q;  1YI2 P;  3GKL C;  2EG5 A;  3G6E P;  1AF8 A;  4M0I A;  2FAE A;  2DGY A;  1MZ8 A;  3CC4 P;  2L4B A;  1DNY A;  2KGC A;  2BHV A;  3EJB A;  2KG6 A;  1T8K A;  2MY5 A;  2PNG A;  1K9M Q;  2GZF A;  3CCV P;  1M1K Q;  2GDX A;  2GZI A;  2PEK A;  1VQ7 P;  2LF4 A;  3CCS P;  2MVU A;  2JU1 A;  2LML A;  1JJ2 O;  2BUO A;  2QNW A;  1RO0 A;  3I56 P;  2GZG A;  3NTE A;  1F80 D;  4COP A;  3G71 P;  2Z46 A;  3DS2 A;  2EHT A;  2L0Q A;  4PH1 A;  1EIA A;  1X3O A;  2Z44 A;  3MGE A;  1IMP A;  1KLP A;  3EJD A;  5JPA A;  3B5I A;  3LMO A;  1Q86 Q;  3E2D A;  2PEQ A;  5DCK A;  4DG9 A;  2VSQ A;  4XFZ A;  5BS1 A;  1M74 A;  2EHS A;  2KOR A;  1KQS O;  4BPH A;  3NY7 B;  2XZ1 C;  2LKI A;  1S72 P;  2DNW A;  3RG6 C;  2Z45 A;  2GDY A;  3EJE A;  2K93 A;  2K0D X;  1YJ9 P;  4U0C A;  2GZJ A;  2VLP A;  1M6N A;  1M90 Q;  1IMQ A;  2LOL A;  4GR2 A;  1FR2 A;  2AVA A;  4NEO A;  4XFX A;  5HV8 A;  2WPT A;  2GYK A;  3M1M A;  1A8O A;  5EW5 E;  1IUQ A;  1YIJ P;  2FVA A;  1VQO P;  3P05 A;  4CA3 A;  4IZ6 A;  4F37 A;  2L9F A;  1VQL P;  2L22 A;  5HGO A;  2N5I A;  4QNB A;  3CD6 P;  3G1I A;  2KG8 A;  1OR5 A;  1HQB A;  4XRQ A;  2AFE A;  3LRY A;  1E6J P;  4BPF A;  3HYB A;  4H2X C;  2X2B A;  1NJI Q;  1CEI A;  3CCU P;  3VRL C;  1Q81 Q;  3G28 A;  2PEJ A;  3G0V A;  3CCM P;  1QVG O;  1VKU A;  1VQ6 P;  1VQ5 P;  2KOQ A;  3CME P;  1HY8 A;  1DV5 A;  1Z6M A;  2N6Z A;  2NO8 A;  1VQM P;  2AF8 A;  3CC2 P;  5HGM A;  2PEI A;  2XZ0 D;  2JBG A;  1W2B O;  2KR5 A;  2JAZ A;  1Q7Y Q;  2L6E A;  2EIA A;  3OW2 O;  4XRO A;  5KP8 B;  2M8L A;  4QKO A;  2P9X A;  2ERH A;  1YJN P;  2EFJ A;  2MR8 A;  1RNI A;  1QVF O;  2KGD A;  1L0I A;  2K0Y A;  2E1M A;  2M5R A;  2XT1 A;  1EOQ A;  2FQ0 A; 
#chains in the Genus database with same CATH homology
 2FAD A;  2AVA A;  2N98 A;  2L4B A;  4NEO A;  5KP6 B;  2LIU A;  1DNY A;  2KGC A;  2JGP A;  2KOO A;  3EJB A;  2KG6 A;  2KW2 A;  5HV8 A;  1T8K A;  2MY5 A;  2K92 A;  2MD9 A;  2K0X A;  2MR7 A;  2PNG A;  4HKG A;  4PXH B;  2JQ4 A;  2GDX A;  2KGA A;  2FVA A;  2MVU A;  2JU1 A;  2LPK A;  2LML A;  3GZL A;  4CA3 A;  4IZ6 A;  1NQ4 A;  2QNW A;  2L9F A;  2L22 A;  2N5H A;  2LL8 A;  2N6Y A;  1F80 D;  1ACP A;  2LIW A;  2N5I A;  2EHT A;  2L0Q A;  2KG8 A;  1OR5 A;  1HQB A;  2FAC A;  4R0M A;  1X3O A;  2AFE A;  2KOS A;  4H2W C;  1KLP A;  3EJD A;  2KG9 A;  4H2Y C;  3LMO A;  4MRT C;  2AFD A;  2KOP A;  3GZM A;  5KP7 B;  4BPF A;  2CNR A;  4H2X C;  2X2B A;  4DG9 A;  2VSQ A;  2K2Q A;  2EHS A;  2CQ8 A;  2N50 A;  2KOR A;  2FVE A;  3RG2 A;  4BPH A;  3NY7 B;  1L0H A;  2XZ1 C;  2MF4 A;  2FQ2 A;  1VKU A;  2LKI A;  2KOQ A;  1HY8 A;  1DV5 A;  2N6Z A;  2FVF A;  2FQ1 A;  2DNW A;  2AF8 A;  2LTE A;  2CGQ A;  2K94 A;  2XZ0 D;  5HVC A;  2KR5 A;  2GDW A;  2GDY A;  3EJE A;  2K93 A;  2KWL A;  2FHS C;  5KP8 B;  2CG5 B;  2JU2 A;  2MVV A;  5CZD B;  5EJD A;  2MR8 A;  4BPG A;  3CE7 A;  2KGD A;  1L0I A;  2K0Y A;  2KGE A;  2M5R A;  2LOL A;  2ROQ A;  4PWV B;  1AF8 A;  2FQ0 A;  2FAE A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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