2K0YA

The actinorhodin apo acyl carrier protein from s. coelicolor
Total Genus 28
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
28
sequence length
86
structure length
86
Chain Sequence
MATLLTTDDLRRALVESAGETDGTDLSGDFLDLRFEDIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLINGALAEAA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transport protein
molecule keywords Actinorhodin polyketide synthase acyl carrier protein
publication title An ACP Structural Switch: Conformational Differences between the Apo and Holo Forms of the Actinorhodin Polyketide Synthase Acyl Carrier Protein.
pubmed doi rcsb
source organism Streptomyces coelicolor
total genus 28
structure length 86
sequence length 86
ec nomenclature
pdb deposition date 2008-02-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2k0yA00
3NY7B 2EHSA 2LIUA 2AFDA 2MVVA 3EJEA 4PWVB 2K0XA 4IZ6A 4H2WC 2JQ4A 2K0YA 4H2XC 5KP6B 4PXHB 2CNRA 4R0MA 2MVUA 2GDXA 2KWLA 2FVFA 2CGQA 2PNGA 5EJDA 1KLPA 2FHSC 2N98A 2L22A 2EHTA 2K92A 4BPFA 2KGCA 1ACPA 3GZMA 2JU2A 2KGEA 2KG6A 3EJBA 2N50A 2L9FA 2LTEA 2FQ0A 2LIWA 2K2QA 3EJDA 5KP8B 1L0IA 2KOSA 2KOOA 1VKUA 2FADA 1AF8A 2CG5B 2AVAA 2FVAA 2K94A 2LL8A 2LKIA 4BPHA 2QNWA 1HQBA 2KORA 2L0QA 1HY8A 2KG9A 2KGAA 2LMLA 2KW2A 3RG2A 1NQ4A 4H2YC 4DG9A 2MR8A 2KG8A 2K93A 2LPKA 1L0HA 2M5RA 2KOQA 1DV5A 2LOLA 1F80D 2MD9A 5HVCA 2L4BA 2DNWA 2FACA 2N5HA 2N6ZA 2N5IA 2FQ1A 2FVEA 2MF4A 3CE7A 4NEOA 4BPGA 2GDYA 4CA3A 2N6YA 4MRTC 4HKGA 2FQ2A 2AF8A 5CZDB 2CQ8A 2KOPA 3LMOA 5HV8A 1DNYA 2KR5A 3GZLA 2ROQA 2X2BA 2VSQA 5KP7B 2XZ1C 2MY5A 2KGDA 2JGPA 2MR7A 1X3OA 1OR5A 2XZ0D 2JU1A 1T8KA 2AFEA 2GDWA 2FAEA
chains in the Genus database with same CATH superfamily
2EHSA 2LIUA 1RO0A 3WBHA 4H2XC 3G21A 3B5IA 2EG5A 3H0DA 5F2OA 1AYIA 3G0VA 4GR6A 3CCUP 2FHSC 1BXIA 2N98A 3CCEP 3MGEA 3DS5A 7CEIA 1IMQA 4BPFA 2KGCA 2JU2A 3Q20A 2GZIA 1IMPA 3G4SP 1GXGA 1VQ7P 5HGNA 2VLPA 2K2QA 2EFJA 2CWOA 2PEOA 2E1MA 2LKIA 2QNWA 1ZMBA 3CMEP 2GYKA 2VLQA 5HGLA 2KORA 2L0QA 4XFZA 1EOQA 3CMAP 2XT1A 3DS0A 3M1MA 3RG2A 3CD6P 4PH0A 2K0DX 1NJIQ 4DG9A 2K93A 1VQ9P 1JJ2O 2KOQA 1YJ9P 1F80D 2BUOA 3GJNA 2GZEA 3CCSP 3DS4A 4U0AA 2N5IA 2M8NA 2WPTA 2MF4A 5F2NA 1EMVA 2GDYA 3CCVP 1RNIA 3H4EA 5CZDB 2CQ8A 2KOPA 1GXHA 3CXCO 3GZLA 3DTJA 1QVFO 3CC7P 2KGDA 1OR5A 2XZ0D 2PEQA 1K9MQ 1VQ4P 2AFEA 2K5XA 1YHQP 2ONTA 1CEIA 1YJWP 1QVGO 3NY7B 1GPJA 1Z6MA 3EJEA 4PWVB 2GZGA 2OTLP 3G29A 4H2WC 1IUQA 4U0DA 4PXHB 4R0MA 3CCQP 2MVUA 3LRYA 3DS1A 1VQLP 2GDXA 3U43A 2FVFA 5EJDA 1K8AQ 1E6JP 2L22A 2QEXP 1YIJP 2EHTA 2PEKA 1K73Q 2PEJA 2VLNA 2JAZA 2KGEA 2OARA 3EJBA 1M74A 1VQKP 2L9FA 1M1KQ 2KODA 2PENA 4COCA 2JB0A 1VKUA 3E2DA 2CG5B 2FVAA 2LL8A 2M8LA 4BPHA 4F37A 2JBGA 2KGAA 1M6EX 2MR8A 2QA4P 1DV5A 3CCJP 4PH1A 2LOLA 2MD9A 2Z44A 3VRLC 2N5HA 2FQ1A 5HGMA 2BHVA 3CE7A 2Z46A 1ZNVA 4BPGA 4CA3A 2N6YA 5DCKA 1N8RQ 2KR5A 2JYGA 2X2BA 3G6EP 1KD1Q 1X3OA 2M8PA 3I55P 5F2KA 2AFDA 2MVVA 1VQ8P 4UHPB 3P05A 4XRQA 2K0XA 2OTJP 3HYBA 2GZFA 2CNRA 1Q81Q 2KWLA 2PNGA 2JO0A 3G71P 2K92A 4IPYA 1K30A 1ACPA 3GZMA 2N50A 1YJNP 1EIAA 1MZ8A 2PEMA 2XXMA 1YI2P 2LIWA 3EJDA 3CCRP 4QNBA 5KP8B 2VLOA 2KOOA 2LF4A 3G28A 2FADA 1AF8A 2AVAA 2K94A 1HQBA 3CCLP 4GR2A 1HY8A 2KG9A 4U0BA 2LMLA 5JPAA 2KW2A 1NQ4A 4H2YC 2EIAA 5I4TG 3DPHA 3OW2O 4U0FA 1UJZA 2DNWA 2FACA 2N6ZA 2FVEA 4NEOA 2XV6A 2PEIA 1FR2A 3G1IA 4HKGA 1A8OA 1QRJA 5HV8A 1KC8Q 1DNYA 1W2BO 4QKOA 2ERHA 2ROQA 3I56P 5KP7B 4XROA 2MY5A 1VQ6P 1VQ5P 2MR7A 1Q7YQ 1BAJA 2JU1A 3DS3A 1VQOP 2FAEA 4IZ6A 1VQNP 2PY8A 2JQ4A 2K0YA 1VQMP 1RO2A 1KQSO 5KP6B 3GKLC 1VHNA 3CC2P 2CGQA 4M0IA 1KLPA 5BS1A 1Q82Q 2L6EA 2KG6A 5BS2A 2LTEA 3G26A 2FQ0A 1D1DA 4U0EA 4COPA 1L0IA 2JYLA 2KOSA 2Z45A 4WYMA 3G1GA 1M6NA 1YITP 3RG6C 4U0CA 3CPWO 3DS2A 1M90Q 5EW5E 2NO8A 2P9XA 1A43A 2KG8A 4XFXA 2LPKA 1L0HA 2M5RA 3H47A 3CC4P 3CCMP 5HVCA 2L4BA 4XFYA 1VQPP 1Q86Q 4MRTC 2FQ2A 2AF8A 1E0HA 2GZJA 3B4QA 3NTEA 3HZQA 3LMOA 2DGYA 5HGOA 2VSQA 2XZ1C 1AUMA 2JGPA 1UNKA 1T8KA 1S72P 2GDWA
chains in the Genus database with same CATH topology
3NY7B 2EHSA 2LIUA 2AFDA 2MVVA 3EJEA 4PWVB 2K0XA 4IZ6A 4H2WC 2JQ4A 2K0YA 4H2XC 5KP6B 4PXHB 2CNRA 4R0MA 2MVUA 2GDXA 2KWLA 2FVFA 2CGQA 2PNGA 5EJDA 1KLPA 2FHSC 2N98A 2L22A 2EHTA 2K92A 4BPFA 2KGCA 1ACPA 3GZMA 2JU2A 2KGEA 2KG6A 3EJBA 2N50A 2L9FA 2LTEA 2FQ0A 2LIWA 2K2QA 3EJDA 5KP8B 1L0IA 2KOSA 2KOOA 1VKUA 2FADA 1AF8A 2CG5B 2AVAA 2FVAA 2K94A 2LL8A 2LKIA 4BPHA 2QNWA 1HQBA 2KORA 2L0QA 1HY8A 2KG9A 2KGAA 2LMLA 2KW2A 3RG2A 1NQ4A 4H2YC 4DG9A 2MR8A 2KG8A 2K93A 2LPKA 1L0HA 2M5RA 2KOQA 1DV5A 2LOLA 1F80D 2MD9A 5HVCA 2L4BA 2DNWA 2FACA 2N5HA 2N6ZA 2N5IA 2FQ1A 2FVEA 2MF4A 3CE7A 4NEOA 4BPGA 2GDYA 4CA3A 2N6YA 4MRTC 4HKGA 2FQ2A 2AF8A 5CZDB 2CQ8A 2KOPA 3LMOA 5HV8A 1DNYA 2KR5A 3GZLA 2ROQA 2X2BA 2VSQA 5KP7B 2XZ1C 2MY5A 2KGDA 2JGPA 2MR7A 1X3OA 1OR5A 2XZ0D 2JU1A 1T8KA 2AFEA 2GDWA 2FAEA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3NY7 B;  2EHS A;  2LIU A;  2AFD A;  2MVV A;  3EJE A;  4PWV B;  2K0X A;  4IZ6 A;  4H2W C;  2JQ4 A;  2K0Y A;  4H2X C;  5KP6 B;  4PXH B;  2CNR A;  4R0M A;  2MVU A;  2GDX A;  2KWL A;  2FVF A;  2CGQ A;  2PNG A;  5EJD A;  1KLP A;  2FHS C;  2N98 A;  2L22 A;  2EHT A;  2K92 A;  4BPF A;  2KGC A;  1ACP A;  3GZM A;  2JU2 A;  2KGE A;  2KG6 A;  3EJB A;  2N50 A;  2L9F A;  2LTE A;  2FQ0 A;  2LIW A;  2K2Q A;  3EJD A;  5KP8 B;  1L0I A;  2KOS A;  2KOO A;  1VKU A;  2FAD A;  1AF8 A;  2CG5 B;  2AVA A;  2FVA A;  2K94 A;  2LL8 A;  2LKI A;  4BPH A;  2QNW A;  1HQB A;  2KOR A;  2L0Q A;  1HY8 A;  2KG9 A;  2KGA A;  2LML A;  2KW2 A;  3RG2 A;  1NQ4 A;  4H2Y C;  4DG9 A;  2MR8 A;  2KG8 A;  2K93 A;  2LPK A;  1L0H A;  2M5R A;  2KOQ A;  1DV5 A;  2LOL A;  1F80 D;  2MD9 A;  5HVC A;  2L4B A;  2DNW A;  2FAC A;  2N5H A;  2N6Z A;  2N5I A;  2FQ1 A;  2FVE A;  2MF4 A;  3CE7 A;  4NEO A;  4BPG A;  2GDY A;  4CA3 A;  2N6Y A;  4MRT C;  4HKG A;  2FQ2 A;  2AF8 A;  5CZD B;  2CQ8 A;  2KOP A;  3LMO A;  5HV8 A;  1DNY A;  2KR5 A;  3GZL A;  2ROQ A;  2X2B A;  2VSQ A;  5KP7 B;  2XZ1 C;  2MY5 A;  2KGD A;  2JGP A;  2MR7 A;  1X3O A;  1OR5 A;  2XZ0 D;  2JU1 A;  1T8K A;  2AFE A;  2GDW A;  2FAE A; 
#chains in the Genus database with same CATH topology
 2EHS A;  2LIU A;  1RO0 A;  3WBH A;  4H2X C;  3G21 A;  3B5I A;  2EG5 A;  3H0D A;  5F2O A;  1AYI A;  3G0V A;  4GR6 A;  3CCU P;  2FHS C;  1BXI A;  2N98 A;  3CCE P;  3MGE A;  3DS5 A;  7CEI A;  1IMQ A;  4BPF A;  2KGC A;  2JU2 A;  3Q20 A;  2GZI A;  1IMP A;  3G4S P;  1GXG A;  1VQ7 P;  5HGN A;  2VLP A;  2K2Q A;  2EFJ A;  2CWO A;  2PEO A;  2E1M A;  2LKI A;  2QNW A;  1ZMB A;  3CME P;  2GYK A;  2VLQ A;  5HGL A;  2KOR A;  2L0Q A;  4XFZ A;  1EOQ A;  3CMA P;  2XT1 A;  3DS0 A;  3M1M A;  3RG2 A;  3CD6 P;  4PH0 A;  2K0D X;  1NJI Q;  4DG9 A;  2K93 A;  1VQ9 P;  1JJ2 O;  2KOQ A;  1YJ9 P;  1F80 D;  2BUO A;  3GJN A;  2GZE A;  3CCS P;  3DS4 A;  4U0A A;  2N5I A;  2M8N A;  2WPT A;  2MF4 A;  5F2N A;  1EMV A;  2GDY A;  3CCV P;  1RNI A;  3H4E A;  5CZD B;  2CQ8 A;  2KOP A;  1GXH A;  3CXC O;  3GZL A;  3DTJ A;  1QVF O;  3CC7 P;  2KGD A;  1OR5 A;  2XZ0 D;  2PEQ A;  1K9M Q;  1VQ4 P;  2AFE A;  2K5X A;  1YHQ P;  2ONT A;  1CEI A;  1YJW P;  1QVG O;  3NY7 B;  1GPJ A;  1Z6M A;  3EJE A;  4PWV B;  2GZG A;  2OTL P;  3G29 A;  4H2W C;  1IUQ A;  4U0D A;  4PXH B;  4R0M A;  3CCQ P;  2MVU A;  3LRY A;  3DS1 A;  1VQL P;  2GDX A;  3U43 A;  2FVF A;  5EJD A;  1K8A Q;  1E6J P;  2L22 A;  2QEX P;  1YIJ P;  2EHT A;  2PEK A;  1K73 Q;  2PEJ A;  2VLN A;  2JAZ A;  2KGE A;  2OAR A;  3EJB A;  1M74 A;  1VQK P;  2L9F A;  1M1K Q;  2KOD A;  2PEN A;  4COC A;  2JB0 A;  1VKU A;  3E2D A;  2CG5 B;  2FVA A;  2LL8 A;  2M8L A;  4BPH A;  4F37 A;  2JBG A;  2KGA A;  1M6E X;  2MR8 A;  2QA4 P;  1DV5 A;  3CCJ P;  4PH1 A;  2LOL A;  2MD9 A;  2Z44 A;  3VRL C;  2N5H A;  2FQ1 A;  5HGM A;  2BHV A;  3CE7 A;  2Z46 A;  1ZNV A;  4BPG A;  4CA3 A;  2N6Y A;  5DCK A;  1N8R Q;  2KR5 A;  2JYG A;  2X2B A;  3G6E P;  1KD1 Q;  1X3O A;  2M8P A;  3I55 P;  5F2K A;  2AFD A;  2MVV A;  1VQ8 P;  4UHP B;  3P05 A;  4XRQ A;  2K0X A;  2OTJ P;  3HYB A;  2GZF A;  2CNR A;  1Q81 Q;  2KWL A;  2PNG A;  2JO0 A;  3G71 P;  2K92 A;  4IPY A;  1K30 A;  1ACP A;  3GZM A;  2N50 A;  1YJN P;  1EIA A;  1MZ8 A;  2PEM A;  2XXM A;  1YI2 P;  2LIW A;  3EJD A;  3CCR P;  4QNB A;  5KP8 B;  2VLO A;  2KOO A;  2LF4 A;  3G28 A;  2FAD A;  1AF8 A;  2AVA A;  2K94 A;  1HQB A;  3CCL P;  4GR2 A;  1HY8 A;  2KG9 A;  4U0B A;  2LML A;  5JPA A;  2KW2 A;  1NQ4 A;  4H2Y C;  2EIA A;  5I4T G;  3DPH A;  3OW2 O;  4U0F A;  1UJZ A;  2DNW A;  2FAC A;  2N6Z A;  2FVE A;  4NEO A;  2XV6 A;  2PEI A;  1FR2 A;  3G1I A;  4HKG A;  1A8O A;  1QRJ A;  5HV8 A;  1KC8 Q;  1DNY A;  1W2B O;  4QKO A;  2ERH A;  2ROQ A;  3I56 P;  5KP7 B;  4XRO A;  2MY5 A;  1VQ6 P;  1VQ5 P;  2MR7 A;  1Q7Y Q;  1BAJ A;  2JU1 A;  3DS3 A;  1VQO P;  2FAE A;  4IZ6 A;  1VQN P;  2PY8 A;  2JQ4 A;  2K0Y A;  1VQM P;  1RO2 A;  1KQS O;  5KP6 B;  3GKL C;  1VHN A;  3CC2 P;  2CGQ A;  4M0I A;  1KLP A;  5BS1 A;  1Q82 Q;  2L6E A;  2KG6 A;  5BS2 A;  2LTE A;  3G26 A;  2FQ0 A;  1D1D A;  4U0E A;  4COP A;  1L0I A;  2JYL A;  2KOS A;  2Z45 A;  4WYM A;  3G1G A;  1M6N A;  1YIT P;  3RG6 C;  4U0C A;  3CPW O;  3DS2 A;  1M90 Q;  5EW5 E;  2NO8 A;  2P9X A;  1A43 A;  2KG8 A;  4XFX A;  2LPK A;  1L0H A;  2M5R A;  3H47 A;  3CC4 P;  3CCM P;  5HVC A;  2L4B A;  4XFY A;  1VQP P;  1Q86 Q;  4MRT C;  2FQ2 A;  2AF8 A;  1E0H A;  2GZJ A;  3B4Q A;  3NTE A;  3HZQ A;  3LMO A;  2DGY A;  5HGO A;  2VSQ A;  2XZ1 C;  1AUM A;  2JGP A;  1UNK A;  1T8K A;  1S72 P;  2GDW A; 
#chains in the Genus database with same CATH homology
 3NY7 B;  2EHS A;  2LIU A;  2AFD A;  2MVV A;  3EJE A;  4PWV B;  2K0X A;  4IZ6 A;  4H2W C;  2JQ4 A;  2K0Y A;  4H2X C;  5KP6 B;  4PXH B;  2CNR A;  4R0M A;  2MVU A;  2GDX A;  2KWL A;  2FVF A;  2CGQ A;  2PNG A;  5EJD A;  1KLP A;  2FHS C;  2N98 A;  2L22 A;  2EHT A;  2K92 A;  4BPF A;  2KGC A;  1ACP A;  3GZM A;  2JU2 A;  2KGE A;  2KG6 A;  3EJB A;  2N50 A;  2L9F A;  2LTE A;  2FQ0 A;  2LIW A;  2K2Q A;  3EJD A;  5KP8 B;  1L0I A;  2KOS A;  2KOO A;  1VKU A;  2FAD A;  1AF8 A;  2CG5 B;  2AVA A;  2FVA A;  2K94 A;  2LL8 A;  2LKI A;  4BPH A;  2QNW A;  1HQB A;  2KOR A;  2L0Q A;  1HY8 A;  2KG9 A;  2KGA A;  2LML A;  2KW2 A;  3RG2 A;  1NQ4 A;  4H2Y C;  4DG9 A;  2MR8 A;  2KG8 A;  2K93 A;  2LPK A;  1L0H A;  2M5R A;  2KOQ A;  1DV5 A;  2LOL A;  1F80 D;  2MD9 A;  5HVC A;  2L4B A;  2DNW A;  2FAC A;  2N5H A;  2N6Z A;  2N5I A;  2FQ1 A;  2FVE A;  2MF4 A;  3CE7 A;  4NEO A;  4BPG A;  2GDY A;  4CA3 A;  2N6Y A;  4MRT C;  4HKG A;  2FQ2 A;  2AF8 A;  5CZD B;  2CQ8 A;  2KOP A;  3LMO A;  5HV8 A;  1DNY A;  2KR5 A;  3GZL A;  2ROQ A;  2X2B A;  2VSQ A;  5KP7 B;  2XZ1 C;  2MY5 A;  2KGD A;  2JGP A;  2MR7 A;  1X3O A;  1OR5 A;  2XZ0 D;  2JU1 A;  1T8K A;  2AFE A;  2GDW A;  2FAE A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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