1F80D

Holo-(acyl carrier protein) synthase in complex with holo-(acyl carrier protein)
Total Genus 23

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
23
sequence length
74
structure length
73
Chain Sequence
SADTLERVTKIIVDRLGVDEADVKLEASFKEDLGADLDVVELVMELEDEFDMEISDEDAEKIATVGDAVNYIQ

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
AH1 (1-14)AH3 (37-49)TIV1 (18-21)TIV2 (19-22)TI1 (23-26)AH5 (65-72)AH2 (28-32)AH4 (56-61)EMPTYO1 (61-63)Updating...
connected with : NaN
molecule tags Transferase
source organism Bacillus subtilis
publication title Crystal structures of substrate binding to Bacillus subtilis holo-(acyl carrier protein) synthase reveal a novel trimeric arrangement of molecules resulting in three active sites.
pubmed doi rcsb
molecule keywords HOLO-(ACYL CARRIER PROTEIN) SYNTHASE
total genus 23
structure length 73
sequence length 74
chains with identical sequence E, F
ec nomenclature
pdb deposition date 2000-06-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
D PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 1f80D00
2K94A 2L22A 1ACPA 1DNYA 2K2QA 2GDXA 2MY5A 4BPHA 5HV8A 2N6ZA 1OR5A 3RG2A 1HQBA 2FVEA 2XZ0D 1AF8A 3GZLA 2L0QA 2KG8A 2LMLA 1L0HA 2LL8A 2X2BA 2CQ8A 5KP8B 2FACA 1HY8A 2MD9A 2MF4A 4H2XC 2N5HA 5EJDA 2N5IA 1F80D 2LIUA 4NEOA 2KOSA 2KG6A 2CG5B 1X3OA 2KOQA 3EJDA 2FVAA 2GDWA 2CGQA 2FAEA 4H2WC 2JU1A 2FQ1A 2MVUA 4HKGA 4CA3A 1L0IA 2MVVA 2LTEA 2AFDA 4PXHB 4R0MA 2FQ2A 2QNWA 2GDYA 2KGAA 3NY7B 2FADA 2KW2A 2N6YA 3GZMA 2AVAA 2L4BA 2LIWA 2MR8A 4BPGA 1VKUA 2N50A 2JU2A 2M5RA 4H2YC 2EHTA 4PWVB 3CE7A 2AFEA 5CZDB 1DV5A 2MR7A 2K93A 2DNWA 2N98A 3EJBA 4DG9A 1NQ4A 2AF8A 5KP6B 2KWLA 2PNGA 2KOPA 2K0YA 2FHSC 2LPKA 2EHSA 2VSQA 2JGPA 1KLPA 4IZ6A 2FVFA 2KOOA 2CNRA 2JQ4A 2KGDA 2K0XA 2KG9A 2KGEA 4BPFA 2KR5A 2LOLA 2ROQA 1T8KA 3EJEA 2KGCA 3LMOA 2KORA 2FQ0A 2L9FA 2LKIA 5KP7B 2XZ1C 4MRTC 5HVCA 2K92A
chains in the Genus database with same CATH superfamily
2K94A 1QVGO 1ACPA 2P9XA 2BHVA 2K2QA 1Q86Q 2E1MA 1OR5A 2K0DX 1RNIA 2L0QA 3I55P 1L0HA 2GZEA 5F2OA 1HY8A 2MF4A 1IMPA 1UJZA 2N5HA 5BS2A 2KOSA 2CG5B 1M6NA 2JAZA 1E0HA 4XRQA 2CGQA 1MZ8A 1AYIA 3CD6P 3HZQA 3G71P 1W2BO 4U0BA 1A43A 2MVVA 1YITP 3Q20A 4R0MA 3CC7P 1N8RQ 2AVAA 2MR8A 4BPGA 1GXGA 2N50A 5BS1A 2M5RA 2QEXP 3DS1A 1AUMA 1DV5A 2DGYA 2MR7A 3G28A 2VLOA 3DPHA 1VQLP 3EJBA 4DG9A 2LF4A 2AF8A 5KP6B 2PNGA 2K0YA 2VSQA 2GZFA 3E2DA 4IZ6A 2JQ4A 4IPYA 1D1DA 4QKOA 4WYMA 1VQ8P 1K73Q 2KGEA 4BPFA 3G29A 3LMOA 1VQ6P 3B5IA 1IUQA 2PEKA 5HVCA 2PY8A 2NO8A 3CCJP 2WPTA 3GKLC 3RG6C 5I4TG 3CXCO 3CMAP 1HQBA 1VQKP 2VLQA 2XV6A 2LL8A 1M90Q 3DS3A 2FACA 4H2XC 1KQSO 5EJDA 2XT1A 5DCKA 2OTJP 1X3OA 2KOQA 4GR2A 2FVAA 2FAEA 4H2WC 2JU1A 1GPJA 2MVUA 3DS5A 1Q82Q 1L0IA 1JJ2O 2LTEA 1BAJA 2AFDA 1VQOP 2GDYA 2ONTA 5HGMA 5F2KA 1VKUA 2BUOA 3G0VA 3WBHA 2CWOA 3CE7A 2VLNA 2K93A 1VQPP 3OW2O 1YI2P 1Q81Q 3HYBA 1KLPA 2JGPA 1FR2A 2FVFA 3DS0A 1Z6MA 4M0IA 2KGDA 2K0XA 4XFYA 1E6JP 5EW5E 3CCMP 2FQ0A 3G1GA 2PEOA 1A8OA 2XXMA 5JPAA 2K92A 2L22A 1DNYA 3CCEP 2PENA 2GDXA 2Z45A 1KC8Q 3G21A 4BPHA 5HV8A 4XFXA 1VQ5P 2N6ZA 2QA4P 1VQ9P 4U0DA 4XFZA 2FVEA 2XZ0D 1AF8A 3GZLA 2EIAA 2LMLA 1NJIQ 2JYGA 1VQ4P 1VQMP 3G1IA 3CCUP 2N5IA 3M1MA 1F80D 2KG6A 2GZJA 2PEJA 3EJDA 3CCVP 2M8PA 1RO2A 2FQ1A 3CCLP 4PH1A 1QVFO 4HKGA 5F2NA 1VQ7P 3G4SP 1VQNP 4PXHB 2VLPA 2FQ2A 1EOQA 2EG5A 3DS4A 2M8LA 2KGAA 2FADA 3GZMA 2L4BA 2LIWA 3NTEA 2JB0A 2Z44A 5HGLA 4QNBA 4U0FA 2EHTA 2AFEA 3CPWO 1VHNA 1EIAA 1EMVA 1Q7YQ 2DNWA 1YJWP 1YJ9P 1NQ4A 3CCQP 2OARA 4XROA 2KWLA 2KOPA 2KODA 3CC4P 2LPKA 2EHSA 2CNRA 2GZGA 2K5XA 3MGEA 3I56P 4PH0A 3H0DA 2KG9A 5HGOA 2EFJA 1IMQA 3H47A 2KR5A 2LOLA 2ROQA 1M6EX 2KGCA 4U0EA 2KORA 2LKIA 5KP7B 2XZ1C 4F37A 3CCSP 2OTLP 1K9MQ 3P05A 2MY5A 1QRJA 3GJNA 3RG2A 4GR6A 2GZIA 2KG8A 2JBGA 7CEIA 2X2BA 2CQ8A 5KP8B 1GXHA 1S72P 1RO0A 2MD9A 1ZNVA 2JYLA 2PEMA 2LIUA 4NEOA 2L6EA 3G26A 2GDWA 3VRLC 1M1KQ 1ZMBA 4COCA 4CA3A 2GYKA 3CC2P 4COPA 2PEIA 2QNWA 2PEQA 3NY7B 2KW2A 2N6YA 1KD1Q 3CMEP 2JU2A 4H2YC 4U0AA 4PWVB 5CZDB 1K30A 1BXIA 2N98A 3H4EA 3CCRP 3DTJA 5HGNA 2FHSC 2M8NA 1M74A 2KOOA 4UHPB 3G6EP 4U0CA 3B4QA 2Z46A 1YHQP 1CEIA 3LRYA 1K8AQ 1T8KA 3EJEA 2L9FA 2ERHA 2JO0A 4MRTC 3DS2A 1YJNP 3U43A 1YIJP 1UNKA
chains in the Genus database with same CATH topology
2K94A 2L22A 1ACPA 1DNYA 2K2QA 2GDXA 2MY5A 4BPHA 5HV8A 2N6ZA 1OR5A 3RG2A 1HQBA 2FVEA 2XZ0D 1AF8A 3GZLA 2L0QA 2KG8A 2LMLA 1L0HA 2LL8A 2X2BA 2CQ8A 5KP8B 2FACA 1HY8A 2MD9A 2MF4A 4H2XC 2N5HA 5EJDA 2N5IA 1F80D 2LIUA 4NEOA 2KOSA 2KG6A 2CG5B 1X3OA 2KOQA 3EJDA 2FVAA 2GDWA 2CGQA 2FAEA 4H2WC 2JU1A 2FQ1A 2MVUA 4HKGA 4CA3A 1L0IA 2MVVA 2LTEA 2AFDA 4PXHB 4R0MA 2FQ2A 2QNWA 2GDYA 2KGAA 3NY7B 2FADA 2KW2A 2N6YA 3GZMA 2AVAA 2L4BA 2LIWA 2MR8A 4BPGA 1VKUA 2N50A 2JU2A 2M5RA 4H2YC 2EHTA 4PWVB 3CE7A 2AFEA 5CZDB 1DV5A 2MR7A 2K93A 2DNWA 2N98A 3EJBA 4DG9A 1NQ4A 2AF8A 5KP6B 2KWLA 2PNGA 2KOPA 2K0YA 2FHSC 2LPKA 2EHSA 2VSQA 2JGPA 1KLPA 4IZ6A 2FVFA 2KOOA 2CNRA 2JQ4A 2KGDA 2K0XA 2KG9A 2KGEA 4BPFA 2KR5A 2LOLA 2ROQA 1T8KA 3EJEA 2KGCA 3LMOA 2KORA 2FQ0A 2L9FA 2LKIA 5KP7B 2XZ1C 4MRTC 5HVCA 2K92A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2K94 A;  2L22 A;  1ACP A;  1DNY A;  2K2Q A;  2GDX A;  2MY5 A;  4BPH A;  5HV8 A;  2N6Z A;  1OR5 A;  3RG2 A;  1HQB A;  2FVE A;  2XZ0 D;  1AF8 A;  3GZL A;  2L0Q A;  2KG8 A;  2LML A;  1L0H A;  2LL8 A;  2X2B A;  2CQ8 A;  5KP8 B;  2FAC A;  1HY8 A;  2MD9 A;  2MF4 A;  4H2X C;  2N5H A;  5EJD A;  2N5I A;  1F80 D;  2LIU A;  4NEO A;  2KOS A;  2KG6 A;  2CG5 B;  1X3O A;  2KOQ A;  3EJD A;  2FVA A;  2GDW A;  2CGQ A;  2FAE A;  4H2W C;  2JU1 A;  2FQ1 A;  2MVU A;  4HKG A;  4CA3 A;  1L0I A;  2MVV A;  2LTE A;  2AFD A;  4PXH B;  4R0M A;  2FQ2 A;  2QNW A;  2GDY A;  2KGA A;  3NY7 B;  2FAD A;  2KW2 A;  2N6Y A;  3GZM A;  2AVA A;  2L4B A;  2LIW A;  2MR8 A;  4BPG A;  1VKU A;  2N50 A;  2JU2 A;  2M5R A;  4H2Y C;  2EHT A;  4PWV B;  3CE7 A;  2AFE A;  5CZD B;  1DV5 A;  2MR7 A;  2K93 A;  2DNW A;  2N98 A;  3EJB A;  4DG9 A;  1NQ4 A;  2AF8 A;  5KP6 B;  2KWL A;  2PNG A;  2KOP A;  2K0Y A;  2FHS C;  2LPK A;  2EHS A;  2VSQ A;  2JGP A;  1KLP A;  4IZ6 A;  2FVF A;  2KOO A;  2CNR A;  2JQ4 A;  2KGD A;  2K0X A;  2KG9 A;  2KGE A;  4BPF A;  2KR5 A;  2LOL A;  2ROQ A;  1T8K A;  3EJE A;  2KGC A;  3LMO A;  2KOR A;  2FQ0 A;  2L9F A;  2LKI A;  5KP7 B;  2XZ1 C;  4MRT C;  5HVC A;  2K92 A; 
#chains in the Genus database with same CATH topology
 2K94 A;  1QVG O;  1ACP A;  2P9X A;  2BHV A;  2K2Q A;  1Q86 Q;  2E1M A;  1OR5 A;  2K0D X;  1RNI A;  2L0Q A;  3I55 P;  1L0H A;  2GZE A;  5F2O A;  1HY8 A;  2MF4 A;  1IMP A;  1UJZ A;  2N5H A;  5BS2 A;  2KOS A;  2CG5 B;  1M6N A;  2JAZ A;  1E0H A;  4XRQ A;  2CGQ A;  1MZ8 A;  1AYI A;  3CD6 P;  3HZQ A;  3G71 P;  1W2B O;  4U0B A;  1A43 A;  2MVV A;  1YIT P;  3Q20 A;  4R0M A;  3CC7 P;  1N8R Q;  2AVA A;  2MR8 A;  4BPG A;  1GXG A;  2N50 A;  5BS1 A;  2M5R A;  2QEX P;  3DS1 A;  1AUM A;  1DV5 A;  2DGY A;  2MR7 A;  3G28 A;  2VLO A;  3DPH A;  1VQL P;  3EJB A;  4DG9 A;  2LF4 A;  2AF8 A;  5KP6 B;  2PNG A;  2K0Y A;  2VSQ A;  2GZF A;  3E2D A;  4IZ6 A;  2JQ4 A;  4IPY A;  1D1D A;  4QKO A;  4WYM A;  1VQ8 P;  1K73 Q;  2KGE A;  4BPF A;  3G29 A;  3LMO A;  1VQ6 P;  3B5I A;  1IUQ A;  2PEK A;  5HVC A;  2PY8 A;  2NO8 A;  3CCJ P;  2WPT A;  3GKL C;  3RG6 C;  5I4T G;  3CXC O;  3CMA P;  1HQB A;  1VQK P;  2VLQ A;  2XV6 A;  2LL8 A;  1M90 Q;  3DS3 A;  2FAC A;  4H2X C;  1KQS O;  5EJD A;  2XT1 A;  5DCK A;  2OTJ P;  1X3O A;  2KOQ A;  4GR2 A;  2FVA A;  2FAE A;  4H2W C;  2JU1 A;  1GPJ A;  2MVU A;  3DS5 A;  1Q82 Q;  1L0I A;  1JJ2 O;  2LTE A;  1BAJ A;  2AFD A;  1VQO P;  2GDY A;  2ONT A;  5HGM A;  5F2K A;  1VKU A;  2BUO A;  3G0V A;  3WBH A;  2CWO A;  3CE7 A;  2VLN A;  2K93 A;  1VQP P;  3OW2 O;  1YI2 P;  1Q81 Q;  3HYB A;  1KLP A;  2JGP A;  1FR2 A;  2FVF A;  3DS0 A;  1Z6M A;  4M0I A;  2KGD A;  2K0X A;  4XFY A;  1E6J P;  5EW5 E;  3CCM P;  2FQ0 A;  3G1G A;  2PEO A;  1A8O A;  2XXM A;  5JPA A;  2K92 A;  2L22 A;  1DNY A;  3CCE P;  2PEN A;  2GDX A;  2Z45 A;  1KC8 Q;  3G21 A;  4BPH A;  5HV8 A;  4XFX A;  1VQ5 P;  2N6Z A;  2QA4 P;  1VQ9 P;  4U0D A;  4XFZ A;  2FVE A;  2XZ0 D;  1AF8 A;  3GZL A;  2EIA A;  2LML A;  1NJI Q;  2JYG A;  1VQ4 P;  1VQM P;  3G1I A;  3CCU P;  2N5I A;  3M1M A;  1F80 D;  2KG6 A;  2GZJ A;  2PEJ A;  3EJD A;  3CCV P;  2M8P A;  1RO2 A;  2FQ1 A;  3CCL P;  4PH1 A;  1QVF O;  4HKG A;  5F2N A;  1VQ7 P;  3G4S P;  1VQN P;  4PXH B;  2VLP A;  2FQ2 A;  1EOQ A;  2EG5 A;  3DS4 A;  2M8L A;  2KGA A;  2FAD A;  3GZM A;  2L4B A;  2LIW A;  3NTE A;  2JB0 A;  2Z44 A;  5HGL A;  4QNB A;  4U0F A;  2EHT A;  2AFE A;  3CPW O;  1VHN A;  1EIA A;  1EMV A;  1Q7Y Q;  2DNW A;  1YJW P;  1YJ9 P;  1NQ4 A;  3CCQ P;  2OAR A;  4XRO A;  2KWL A;  2KOP A;  2KOD A;  3CC4 P;  2LPK A;  2EHS A;  2CNR A;  2GZG A;  2K5X A;  3MGE A;  3I56 P;  4PH0 A;  3H0D A;  2KG9 A;  5HGO A;  2EFJ A;  1IMQ A;  3H47 A;  2KR5 A;  2LOL A;  2ROQ A;  1M6E X;  2KGC A;  4U0E A;  2KOR A;  2LKI A;  5KP7 B;  2XZ1 C;  4F37 A;  3CCS P;  2OTL P;  1K9M Q;  3P05 A;  2MY5 A;  1QRJ A;  3GJN A;  3RG2 A;  4GR6 A;  2GZI A;  2KG8 A;  2JBG A;  7CEI A;  2X2B A;  2CQ8 A;  5KP8 B;  1GXH A;  1S72 P;  1RO0 A;  2MD9 A;  1ZNV A;  2JYL A;  2PEM A;  2LIU A;  4NEO A;  2L6E A;  3G26 A;  2GDW A;  3VRL C;  1M1K Q;  1ZMB A;  4COC A;  4CA3 A;  2GYK A;  3CC2 P;  4COP A;  2PEI A;  2QNW A;  2PEQ A;  3NY7 B;  2KW2 A;  2N6Y A;  1KD1 Q;  3CME P;  2JU2 A;  4H2Y C;  4U0A A;  4PWV B;  5CZD B;  1K30 A;  1BXI A;  2N98 A;  3H4E A;  3CCR P;  3DTJ A;  5HGN A;  2FHS C;  2M8N A;  1M74 A;  2KOO A;  4UHP B;  3G6E P;  4U0C A;  3B4Q A;  2Z46 A;  1YHQ P;  1CEI A;  3LRY A;  1K8A Q;  1T8K A;  3EJE A;  2L9F A;  2ERH A;  2JO0 A;  4MRT C;  3DS2 A;  1YJN P;  3U43 A;  1YIJ P;  1UNK A; 
#chains in the Genus database with same CATH homology
 2K94 A;  2L22 A;  1ACP A;  1DNY A;  2K2Q A;  2GDX A;  2MY5 A;  4BPH A;  5HV8 A;  2N6Z A;  1OR5 A;  3RG2 A;  1HQB A;  2FVE A;  2XZ0 D;  1AF8 A;  3GZL A;  2L0Q A;  2KG8 A;  2LML A;  1L0H A;  2LL8 A;  2X2B A;  2CQ8 A;  5KP8 B;  2FAC A;  1HY8 A;  2MD9 A;  2MF4 A;  4H2X C;  2N5H A;  5EJD A;  2N5I A;  1F80 D;  2LIU A;  4NEO A;  2KOS A;  2KG6 A;  2CG5 B;  1X3O A;  2KOQ A;  3EJD A;  2FVA A;  2GDW A;  2CGQ A;  2FAE A;  4H2W C;  2JU1 A;  2FQ1 A;  2MVU A;  4HKG A;  4CA3 A;  1L0I A;  2MVV A;  2LTE A;  2AFD A;  4PXH B;  4R0M A;  2FQ2 A;  2QNW A;  2GDY A;  2KGA A;  3NY7 B;  2FAD A;  2KW2 A;  2N6Y A;  3GZM A;  2AVA A;  2L4B A;  2LIW A;  2MR8 A;  4BPG A;  1VKU A;  2N50 A;  2JU2 A;  2M5R A;  4H2Y C;  2EHT A;  4PWV B;  3CE7 A;  2AFE A;  5CZD B;  1DV5 A;  2MR7 A;  2K93 A;  2DNW A;  2N98 A;  3EJB A;  4DG9 A;  1NQ4 A;  2AF8 A;  5KP6 B;  2KWL A;  2PNG A;  2KOP A;  2K0Y A;  2FHS C;  2LPK A;  2EHS A;  2VSQ A;  2JGP A;  1KLP A;  4IZ6 A;  2FVF A;  2KOO A;  2CNR A;  2JQ4 A;  2KGD A;  2K0X A;  2KG9 A;  2KGE A;  4BPF A;  2KR5 A;  2LOL A;  2ROQ A;  1T8K A;  3EJE A;  2KGC A;  3LMO A;  2KOR A;  2FQ0 A;  2L9F A;  2LKI A;  5KP7 B;  2XZ1 C;  4MRT C;  5HVC A;  2K92 A; 
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