1OR5 | Genus

Total Genus 16

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	16
sequence length	82
structure length	82
Chain Sequence	SALTVDDLKKLLAETAGEDDSVDLAGELDTPFVDLGYDSLALLETAAVLQQRYGIALTDETVGRLGTPRELLDEVNTTPATA

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

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After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Biosynthetic protein
source organism	Streptomyces roseofulvus
publication title	Solution Structure and Backbone Dynamics of the Holo Form of the Frenolicin Acyl Carrier Protein pubmed doi rcsb
molecule keywords	acyl carrier protein
total genus	16
structure length	82
sequence length	82
ec nomenclature
pdb deposition date	2003-03-11

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
A	PF00550	PP-binding	Phosphopantetheine attachment site

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
1.10.1200.10	Mainly Alpha	Orthogonal Bundle	Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A	ACP-like	1or5A00

2LOLA 2JU2A 2KOQA 2KGCA 1NQ4A 1ACPA 1DV5A 2K94A 3EJEA 3NY7B 2KGEA 5HV8A 4BPFA 4H2XC 2KOPA 2FHSC 2FACA 1L0IA 5CZDB 2FQ1A 2KW2A 2MD9A 2KOSA 4R0MA 2L0QA 2MF4A 4HKGA 2FADA 2ROQA 2CQ8A 1VKUA 2DNWA 2FVEA 2K92A 2AVAA 2N5IA 2K0YA 2FQ0A 2JGPA 2CG5B 4NEOA 3LMOA 4IZ6A 5KP7B 2N6YA 2JU1A 2N6ZA 2MVUA 4CA3A 2KG6A 2K0XA 2KR5A 1OR5A 2KG8A 2VSQA 2N98A 4MRTC 2MVVA 2L4BA 2KGDA 2KWLA 3RG2A 2GDWA 3CE7A 2FVFA 2AFDA 2XZ1C 2MY5A 5KP6B 2EHTA 2MR8A 3EJBA 3GZMA 1KLPA 1F80D 2LIUA 2LL8A 2FVAA 2KGAA 4BPGA 5KP8B 2AFEA 2LPKA 3GZLA 2PNGA 2JQ4A 2KORA 2EHSA 3EJDA 2LTEA 1T8KA 2MR7A 2GDYA 1AF8A 4PWVB 2LKIA 4DG9A 4H2YC 5HVCA 4BPHA 2GDXA 2CGQA 2FAEA 4H2WC 2KG9A 2LMLA 2AF8A 2X2BA 2L22A 2M5RA 4PXHB 2K93A 2N5HA 2KOOA 2N50A 1HQBA 2FQ2A 2LIWA 1X3OA 1L0HA 1DNYA 5EJDA 2L9FA 2QNWA 2CNRA 2XZ0D 1HY8A 2K2QA
chains in the Genus database with same CATH superfamily

2GZJA 2PENA 1DV5A 3H4EA 3RG6C 2KOPA 1L0IA 2WPTA 2FQ1A 1NJIQ 2VLOA 2L6EA 2ERHA 4U0FA 2KOSA 4R0MA 1M90Q 3G6EP 2CQ8A 1A8OA 1VKUA 2FVEA 1S72P 3HYBA 5KP7B 4XFYA 1QVGO 2PEQA 3GKLC 4QNBA 2MVUA 1IMPA 2XXMA 2N98A 3H47A 3CCEP 4MRTC 1VQKP 1QRJA 1YHQP 2OTJP 3NTEA 2AFDA 1YJWP 2GYKA 4U0DA 5EW5E 2BUOA 2AFEA 3GZLA 2JQ4A 3CC7P 5F2KA 2KORA 2EHSA 3DTJA 2PY8A 1T8KA 2ONTA 4U0AA 3G1IA 1BXIA 2GDXA 4H2WC 2GZFA 5HGLA 1VQ7P 2PEKA 2X2BA 1AYIA 2KOOA 2N50A 3HZQA 5BS1A 1L0HA 1IUQA 2LOLA 2JU2A 2KGCA 1ACPA 3VRLC 1YITP 4PH0A 1JJ2O 3NY7B 5HV8A 2JB0A 4BPFA 4H2XC 2FHSC 5CZDB 4QKOA 2KW2A 1VQ6P 2DGYA 3DS2A 4HKGA 2FADA 2ROQA 2K92A 3CMEP 2GZGA 2M8NA 2FQ0A 1IMQA 1YJ9P 2CG5B 3LMOA 3U43A 2QA4P 2QEXP 1CEIA 2JU1A 1VQNP 2N6ZA 2PEMA 4CA3A 2KG6A 2KR5A 3B4QA 2KG8A 2VSQA 2CWOA 4COPA 1K30A 5HGOA 2KGDA 2JYLA 2PEIA 1ZNVA 3GJNA 1Q86Q 1AUMA 3G1GA 3CCQP 3G4SP 1BAJA 2MR8A 3GZMA 1M1KQ 1W2BO 1KQSO 2LIUA 2Z46A 1VQOP 4BPGA 5KP8B 1K9MQ 2JO0A 3CCVP 2PNGA 3DPHA 1VHNA 3EJDA 5DCKA 2MR7A 1AF8A 4PWVB 1RO2A 3MGEA 4DG9A 1UJZA 5HVCA 3CD6P 2FAEA 2AF8A 2L22A 5HGMA 4WYMA 4PXHB 2NO8A 2K93A 1VQPP 7CEIA 1YI2P 1DNYA 2L9FA 3CC2P 2CNRA 2XZ0D 2K2QA 1Q7YQ 1NQ4A 2M8PA 5HGNA 1Z6MA 2GZEA 2JAZA 2M8LA 3CCMP 2FACA 3P05A 4XFZA 3CMAP 2K0DX 2OARA 3CCUP 3DS5A 2MF4A 1N8RQ 3I55P 3CCSP 2DNWA 2K0YA 2JGPA 4NEOA 2N6YA 5BS2A 2XV6A 1A43A 2K0XA 1KD1Q 1FR2A 1M6EX 3CCJP 1KC8Q 2XT1A 3CE7A 2VLNA 3OW2O 2XZ1C 3DS0A 2EIAA 3G29A 5KP6B 2EHTA 3WBHA 4UHPB 3I56P 1GXHA 2LPKA 1VQ8P 3CCLP 4XRQA 3CC4P 4XROA 2GZIA 2GDYA 4U0CA 2LKIA 4BPHA 5F2OA 1VQLP 1RO0A 2FQ2A 3CXCO 2P9XA 1M74A 3Q20A 3G71P 2VLPA 1EIAA 2KOQA 3E2DA 2K94A 3DS3A 3EJEA 5I4TG 1Q82Q 2KGEA 3G28A 4F37A 1QVFO 1D1DA 2VLQA 2JBGA 2MD9A 2L0QA 1VQ5P 4IPYA 3G0VA 1VQ4P 1K8AQ 2AVAA 2N5IA 3CCRP 2EG5A 1GPJA 2KODA 4IZ6A 1E6JP 1K73Q 2Z45A 4U0EA 3DS4A 1OR5A 4XFXA 3G21A 1YIJP 2LF4A 2MVVA 2L4BA 2KWLA 1GXGA 3RG2A 1VQ9P 2GDWA 2FVFA 1RNIA 1VQMP 1MZ8A 1Q81Q 2MY5A 1UNKA 2Z44A 2K5XA 2PEJA 3EJBA 1KLPA 1F80D 3M1MA 1YJNP 2LL8A 2PEOA 2FVAA 2KGAA 2EFJA 4GR2A 2E1MA 4GR6A 3DS1A 1M6NA 2JYGA 4U0BA 4PH1A 2LTEA 1ZMBA 3LRYA 5JPAA 4H2YC 2CGQA 1EOQA 2BHVA 2KG9A 2LMLA 3B5IA 4M0IA 2OTLP 2M5RA 3CPWO 4COCA 1E0HA 2N5HA 1HQBA 3G26A 3H0DA 2LIWA 1EMVA 1X3OA 5EJDA 2QNWA 5F2NA 1HY8A
chains in the Genus database with same CATH topology

#chains in the Genus database with same CATH superfamily
 2LOL A;  2JU2 A;  2KOQ A;  2KGC A;  1NQ4 A;  1ACP A;  1DV5 A;  2K94 A;  3EJE A;  3NY7 B;  2KGE A;  5HV8 A;  4BPF A;  4H2X C;  2KOP A;  2FHS C;  2FAC A;  1L0I A;  5CZD B;  2FQ1 A;  2KW2 A;  2MD9 A;  2KOS A;  4R0M A;  2L0Q A;  2MF4 A;  4HKG A;  2FAD A;  2ROQ A;  2CQ8 A;  1VKU A;  2DNW A;  2FVE A;  2K92 A;  2AVA A;  2N5I A;  2K0Y A;  2FQ0 A;  2JGP A;  2CG5 B;  4NEO A;  3LMO A;  4IZ6 A;  5KP7 B;  2N6Y A;  2JU1 A;  2N6Z A;  2MVU A;  4CA3 A;  2KG6 A;  2K0X A;  2KR5 A;  1OR5 A;  2KG8 A;  2VSQ A;  2N98 A;  4MRT C;  2MVV A;  2L4B A;  2KGD A;  2KWL A;  3RG2 A;  2GDW A;  3CE7 A;  2FVF A;  2AFD A;  2XZ1 C;  2MY5 A;  5KP6 B;  2EHT A;  2MR8 A;  3EJB A;  3GZM A;  1KLP A;  1F80 D;  2LIU A;  2LL8 A;  2FVA A;  2KGA A;  4BPG A;  5KP8 B;  2AFE A;  2LPK A;  3GZL A;  2PNG A;  2JQ4 A;  2KOR A;  2EHS A;  3EJD A;  2LTE A;  1T8K A;  2MR7 A;  2GDY A;  1AF8 A;  4PWV B;  2LKI A;  4DG9 A;  4H2Y C;  5HVC A;  4BPH A;  2GDX A;  2CGQ A;  2FAE A;  4H2W C;  2KG9 A;  2LML A;  2AF8 A;  2X2B A;  2L22 A;  2M5R A;  4PXH B;  2K93 A;  2N5H A;  2KOO A;  2N50 A;  1HQB A;  2FQ2 A;  2LIW A;  1X3O A;  1L0H A;  1DNY A;  5EJD A;  2L9F A;  2QNW A;  2CNR A;  2XZ0 D;  1HY8 A;  2K2Q A; 
#chains in the Genus database with same CATH topology
 2GZJ A;  2PEN A;  1DV5 A;  3H4E A;  3RG6 C;  2KOP A;  1L0I A;  2WPT A;  2FQ1 A;  1NJI Q;  2VLO A;  2L6E A;  2ERH A;  4U0F A;  2KOS A;  4R0M A;  1M90 Q;  3G6E P;  2CQ8 A;  1A8O A;  1VKU A;  2FVE A;  1S72 P;  3HYB A;  5KP7 B;  4XFY A;  1QVG O;  2PEQ A;  3GKL C;  4QNB A;  2MVU A;  1IMP A;  2XXM A;  2N98 A;  3H47 A;  3CCE P;  4MRT C;  1VQK P;  1QRJ A;  1YHQ P;  2OTJ P;  3NTE A;  2AFD A;  1YJW P;  2GYK A;  4U0D A;  5EW5 E;  2BUO A;  2AFE A;  3GZL A;  2JQ4 A;  3CC7 P;  5F2K A;  2KOR A;  2EHS A;  3DTJ A;  2PY8 A;  1T8K A;  2ONT A;  4U0A A;  3G1I A;  1BXI A;  2GDX A;  4H2W C;  2GZF A;  5HGL A;  1VQ7 P;  2PEK A;  2X2B A;  1AYI A;  2KOO A;  2N50 A;  3HZQ A;  5BS1 A;  1L0H A;  1IUQ A;  2LOL A;  2JU2 A;  2KGC A;  1ACP A;  3VRL C;  1YIT P;  4PH0 A;  1JJ2 O;  3NY7 B;  5HV8 A;  2JB0 A;  4BPF A;  4H2X C;  2FHS C;  5CZD B;  4QKO A;  2KW2 A;  1VQ6 P;  2DGY A;  3DS2 A;  4HKG A;  2FAD A;  2ROQ A;  2K92 A;  3CME P;  2GZG A;  2M8N A;  2FQ0 A;  1IMQ A;  1YJ9 P;  2CG5 B;  3LMO A;  3U43 A;  2QA4 P;  2QEX P;  1CEI A;  2JU1 A;  1VQN P;  2N6Z A;  2PEM A;  4CA3 A;  2KG6 A;  2KR5 A;  3B4Q A;  2KG8 A;  2VSQ A;  2CWO A;  4COP A;  1K30 A;  5HGO A;  2KGD A;  2JYL A;  2PEI A;  1ZNV A;  3GJN A;  1Q86 Q;  1AUM A;  3G1G A;  3CCQ P;  3G4S P;  1BAJ A;  2MR8 A;  3GZM A;  1M1K Q;  1W2B O;  1KQS O;  2LIU A;  2Z46 A;  1VQO P;  4BPG A;  5KP8 B;  1K9M Q;  2JO0 A;  3CCV P;  2PNG A;  3DPH A;  1VHN A;  3EJD A;  5DCK A;  2MR7 A;  1AF8 A;  4PWV B;  1RO2 A;  3MGE A;  4DG9 A;  1UJZ A;  5HVC A;  3CD6 P;  2FAE A;  2AF8 A;  2L22 A;  5HGM A;  4WYM A;  4PXH B;  2NO8 A;  2K93 A;  1VQP P;  7CEI A;  1YI2 P;  1DNY A;  2L9F A;  3CC2 P;  2CNR A;  2XZ0 D;  2K2Q A;  1Q7Y Q;  1NQ4 A;  2M8P A;  5HGN A;  1Z6M A;  2GZE A;  2JAZ A;  2M8L A;  3CCM P;  2FAC A;  3P05 A;  4XFZ A;  3CMA P;  2K0D X;  2OAR A;  3CCU P;  3DS5 A;  2MF4 A;  1N8R Q;  3I55 P;  3CCS P;  2DNW A;  2K0Y A;  2JGP A;  4NEO A;  2N6Y A;  5BS2 A;  2XV6 A;  1A43 A;  2K0X A;  1KD1 Q;  1FR2 A;  1M6E X;  3CCJ P;  1KC8 Q;  2XT1 A;  3CE7 A;  2VLN A;  3OW2 O;  2XZ1 C;  3DS0 A;  2EIA A;  3G29 A;  5KP6 B;  2EHT A;  3WBH A;  4UHP B;  3I56 P;  1GXH A;  2LPK A;  1VQ8 P;  3CCL P;  4XRQ A;  3CC4 P;  4XRO A;  2GZI A;  2GDY A;  4U0C A;  2LKI A;  4BPH A;  5F2O A;  1VQL P;  1RO0 A;  2FQ2 A;  3CXC O;  2P9X A;  1M74 A;  3Q20 A;  3G71 P;  2VLP A;  1EIA A;  2KOQ A;  3E2D A;  2K94 A;  3DS3 A;  3EJE A;  5I4T G;  1Q82 Q;  2KGE A;  3G28 A;  4F37 A;  1QVF O;  1D1D A;  2VLQ A;  2JBG A;  2MD9 A;  2L0Q A;  1VQ5 P;  4IPY A;  3G0V A;  1VQ4 P;  1K8A Q;  2AVA A;  2N5I A;  3CCR P;  2EG5 A;  1GPJ A;  2KOD A;  4IZ6 A;  1E6J P;  1K73 Q;  2Z45 A;  4U0E A;  3DS4 A;  1OR5 A;  4XFX A;  3G21 A;  1YIJ P;  2LF4 A;  2MVV A;  2L4B A;  2KWL A;  1GXG A;  3RG2 A;  1VQ9 P;  2GDW A;  2FVF A;  1RNI A;  1VQM P;  1MZ8 A;  1Q81 Q;  2MY5 A;  1UNK A;  2Z44 A;  2K5X A;  2PEJ A;  3EJB A;  1KLP A;  1F80 D;  3M1M A;  1YJN P;  2LL8 A;  2PEO A;  2FVA A;  2KGA A;  2EFJ A;  4GR2 A;  2E1M A;  4GR6 A;  3DS1 A;  1M6N A;  2JYG A;  4U0B A;  4PH1 A;  2LTE A;  1ZMB A;  3LRY A;  5JPA A;  4H2Y C;  2CGQ A;  1EOQ A;  2BHV A;  2KG9 A;  2LML A;  3B5I A;  4M0I A;  2OTL P;  2M5R A;  3CPW O;  4COC A;  1E0H A;  2N5H A;  1HQB A;  3G26 A;  3H0D A;  2LIW A;  1EMV A;  1X3O A;  5EJD A;  2QNW A;  5F2N A;  1HY8 A; 
#chains in the Genus database with same CATH homology
 2LOL A;  2JU2 A;  2KOQ A;  2KGC A;  1NQ4 A;  1ACP A;  1DV5 A;  2K94 A;  3EJE A;  3NY7 B;  2KGE A;  5HV8 A;  4BPF A;  4H2X C;  2KOP A;  2FHS C;  2FAC A;  1L0I A;  5CZD B;  2FQ1 A;  2KW2 A;  2MD9 A;  2KOS A;  4R0M A;  2L0Q A;  2MF4 A;  4HKG A;  2FAD A;  2ROQ A;  2CQ8 A;  1VKU A;  2DNW A;  2FVE A;  2K92 A;  2AVA A;  2N5I A;  2K0Y A;  2FQ0 A;  2JGP A;  2CG5 B;  4NEO A;  3LMO A;  4IZ6 A;  5KP7 B;  2N6Y A;  2JU1 A;  2N6Z A;  2MVU A;  4CA3 A;  2KG6 A;  2K0X A;  2KR5 A;  1OR5 A;  2KG8 A;  2VSQ A;  2N98 A;  4MRT C;  2MVV A;  2L4B A;  2KGD A;  2KWL A;  3RG2 A;  2GDW A;  3CE7 A;  2FVF A;  2AFD A;  2XZ1 C;  2MY5 A;  5KP6 B;  2EHT A;  2MR8 A;  3EJB A;  3GZM A;  1KLP A;  1F80 D;  2LIU A;  2LL8 A;  2FVA A;  2KGA A;  4BPG A;  5KP8 B;  2AFE A;  2LPK A;  3GZL A;  2PNG A;  2JQ4 A;  2KOR A;  2EHS A;  3EJD A;  2LTE A;  1T8K A;  2MR7 A;  2GDY A;  1AF8 A;  4PWV B;  2LKI A;  4DG9 A;  4H2Y C;  5HVC A;  4BPH A;  2GDX A;  2CGQ A;  2FAE A;  4H2W C;  2KG9 A;  2LML A;  2AF8 A;  2X2B A;  2L22 A;  2M5R A;  4PXH B;  2K93 A;  2N5H A;  2KOO A;  2N50 A;  1HQB A;  2FQ2 A;  2LIW A;  1X3O A;  1L0H A;  1DNY A;  5EJD A;  2L9F A;  2QNW A;  2CNR A;  2XZ0 D;  1HY8 A;  2K2Q A;

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similar chains in the Genus database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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1OR5A

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN

pfam database annotations