2KOPA

Nmr solution structures of 3-oxooctanyl-acp from streptomyces coelicolor fatty acid synthase
Total Genus 24

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
24
sequence length
81
structure length
81
Chain Sequence
AATQEEIVAGLAEIVNEIAGIPVEDVKLDKSFTDDLDVDSLSMVEVVVAAEERFDVKIPDDDVKNLKTVGDATKYILDHQA

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
EMPTYAH1 (4-19)AH4 (69-80)AH2 (40-54)TIV1 (22-25)TIV3 (27-30)TIV4 (34-37)AH3 (60-64)TIV5 (64-67)3H1 (32-34)Updating...
connected with : NaN
molecule tags Transport protein
source organism Streptomyces coelicolor
publication title Recognition of intermediate functionality by acyl carrier protein over a complete cycle of fatty acid biosynthesis
pubmed doi rcsb
molecule keywords Acyl carrier protein
total genus 24
structure length 81
sequence length 81
ec nomenclature
pdb deposition date 2009-09-29

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2kopA00
2FADA 2KGEA 2MVVA 1T8KA 2N6ZA 1DNYA 2KOQA 2KWLA 2DNWA 1AF8A 2N5IA 2CGQA 1NQ4A 2K0YA 2KGDA 2GDWA 2AFEA 2FVFA 2KGCA 2MVUA 2L9FA 2EHSA 2XZ0D 2FQ2A 2KOPA 5HV8A 4DG9A 2KG8A 5EJDA 4HKGA 2MD9A 2MF4A 2LOLA 2FVAA 2LIWA 5KP7B 2PNGA 3NY7B 2L22A 2VSQA 2K94A 2AVAA 4H2XC 2XZ1C 1L0IA 1ACPA 2L4BA 1OR5A 2N98A 2JQ4A 1F80D 2LIUA 2K92A 3EJDA 3GZLA 5CZDB 2K0XA 2L0QA 2MR8A 2N5HA 2JU1A 2EHTA 2LPKA 2AFDA 1DV5A 4H2YC 5KP6B 1HQBA 4PXHB 4H2WC 2AF8A 5HVCA 2FVEA 2CNRA 2JU2A 1L0HA 2FQ1A 3EJBA 2KOOA 4R0MA 2K93A 4NEOA 2FACA 2MY5A 2LMLA 1X3OA 2K2QA 2KR5A 2MR7A 2QNWA 3GZMA 2FQ0A 2CG5B 2KORA 4MRTC 4PWVB 2X2BA 2LTEA 3CE7A 4IZ6A 4BPHA 2FHSC 2M5RA 2KG9A 1KLPA 2KG6A 5KP8B 2GDXA 2JGPA 2LL8A 3LMOA 2KOSA 2N6YA 2CQ8A 4BPFA 2N50A 2ROQA 2KW2A 4BPGA 2KGAA 4CA3A 1HY8A 3RG2A 3EJEA 2GDYA 2LKIA 1VKUA 2FAEA
chains in the Genus database with same CATH superfamily
1UNKA 1VQ9P 3CCRP 1GPJA 3DS3A 2MVVA 1T8KA 2PEMA 2N6ZA 1DNYA 2KOQA 1GXGA 2DNWA 4UHPB 2QA4P 2EIAA 4U0EA 1UJZA 2EG5A 2NO8A 1FR2A 4U0FA 2L9FA 5HV8A 4DG9A 3I56P 4IPYA 5F2OA 2K94A 2XZ1C 1L0IA 1ACPA 2JQ4A 4U0AA 1YJNP 2MR8A 2LPKA 1E6JP 2BUOA 3H4EA 2PEIA 5KP6B 3CC2P 2M8NA 4XFZA 2FVEA 5EW5E 2QEXP 1VQPP 5HGOA 1L0HA 2FQ1A 4QKOA 1YJWP 3B4QA 2GZIA 4NEOA 2MY5A 2JYLA 2VLOA 1M1KQ 2K2QA 3E2DA 3DS0A 2QNWA 1K73Q 4PWVB 3CC4P 2Z45A 2X2BA 4IZ6A 2FHSC 3DPHA 1YIJP 2GZJA 2KG9A 5KP8B 2OARA 3LRYA 1YJ9P 3HZQA 2CWOA 4XRQA 2ROQA 4BPGA 2KGAA 2JBGA 3G6EP 1VQ5P 2FAEA 3CPWO 2PEOA 1VHNA 3DS2A 1W2BO 2VLPA 2CGQA 2GDWA 1IMPA 2AFEA 2JYGA 2OTJP 3CCEP 1IMQA 2BHVA 3CC7P 2LF4A 2EHSA 2XZ0D 2KOPA 3VRLC 4GR2A 2KG8A 4HKGA 4PH0A 2LOLA 1VQLP 5HGMA 2VSQA 4H2XC 2AVAA 2L4BA 1VQKP 2N98A 3EJDA 3H0DA 3HYBA 1QRJA 1VQMP 2L0QA 2JU1A 1ZNVA 4H2YC 3CXCO 3CMAP 1HQBA 2GZFA 4H2WC 3CCSP 2AF8A 1QVFO 3G0VA 3EJBA 1E0HA 4R0MA 1D1DA 1AYIA 1X3OA 1Q82Q 2JO0A 1RNIA 2FQ0A 4GR6A 2M5RA 4XFYA 4F37A 1YHQP 1AUMA 1BAJA 1BXIA 1VQ4P 1CEIA 1GXHA 2KW2A 2LKIA 1M6EX 2K0DX 5F2NA 1IUQA 2OTLP 4PH1A 4U0BA 4XFXA 2FADA 3Q20A 4M0IA 1A8OA 3CD6P 1NQ4A 2K0YA 1K30A 4QNBA 3P05A 3GKLC 1Q7YQ 2FVFA 4U0DA 5EJDA 2MD9A 2MF4A 1VQOP 2FVAA 5KP7B 3NY7B 1K9MQ 1EIAA 1QVGO 1K8AQ 3B5IA 3U43A 2LIUA 2XV6A 3G71P 3DTJA 2KODA 3G29A 2AFDA 1Z6MA 1M6NA 3MGEA 5HVCA 1EMVA 3CMEP 2CNRA 3CCUP 2JU2A 1VQ6P 2M8PA 4WYMA 2K93A 2XXMA 2FACA 3H47A 2VLQA 4COPA 2KR5A 2MR7A 2CG5B 2KORA 4MRTC 2LTEA 1Q86Q 2GZGA 2PY8A 2KG6A 1VQNP 2K5XA 2GDXA 2Z46A 1RO2A 2JGPA 3LMOA 2VLNA 4XROA 2CQ8A 1NJIQ 2WPTA 1M74A 2XT1A 4CA3A 2E1MA 3RG2A 3EJEA 2ERHA 1MZ8A 2GDYA 7CEIA 3I55P 5HGNA 2Z44A 3GJNA 2KGEA 1N8RQ 3OW2O 3CCMP 1KC8Q 2KWLA 1AF8A 2N5IA 3CCLP 2KGDA 3CCJP 3DS1A 2JAZA 3G26A 1EOQA 3M1MA 1A43A 2L6EA 2KGCA 2MVUA 2GZEA 2FQ2A 2PEJA 5I4TG 2LIWA 1VQ8P 2PNGA 2L22A 3DS4A 2M8LA 5JPAA 1S72P 5BS1A 5HGLA 1OR5A 1F80D 3CCVP 2K92A 3GZLA 5CZDB 2K0XA 2N5HA 2EHTA 1DV5A 2JB0A 2PEKA 2PEQA 3G28A 4PXHB 3G1IA 2EFJA 5BS2A 1JJ2O 2KOOA 1RO0A 1ZMBA 1VQ7P 2ONTA 1KD1Q 2LMLA 5F2KA 1YI2P 3GZMA 1M90Q 3CE7A 4BPHA 3DS5A 1KLPA 1YITP 4U0CA 2LL8A 1Q81Q 2KOSA 2N6YA 3WBHA 3CCQP 3G4SP 4BPFA 2N50A 3RG6C 3G21A 2GYKA 2P9XA 2PENA 1HY8A 4COCA 1KQSO 2DGYA 3NTEA 5DCKA 1VKUA 3G1GA
chains in the Genus database with same CATH topology
2FADA 2KGEA 2MVVA 1T8KA 2N6ZA 1DNYA 2KOQA 2KWLA 2DNWA 1AF8A 2N5IA 2CGQA 1NQ4A 2K0YA 2KGDA 2GDWA 2AFEA 2FVFA 2KGCA 2MVUA 2L9FA 2EHSA 2XZ0D 2FQ2A 2KOPA 5HV8A 4DG9A 2KG8A 5EJDA 4HKGA 2MD9A 2MF4A 2LOLA 2FVAA 2LIWA 5KP7B 2PNGA 3NY7B 2L22A 2VSQA 2K94A 2AVAA 4H2XC 2XZ1C 1L0IA 1ACPA 2L4BA 1OR5A 2N98A 2JQ4A 1F80D 2LIUA 2K92A 3EJDA 3GZLA 5CZDB 2K0XA 2L0QA 2MR8A 2N5HA 2JU1A 2EHTA 2LPKA 2AFDA 1DV5A 4H2YC 5KP6B 1HQBA 4PXHB 4H2WC 2AF8A 5HVCA 2FVEA 2CNRA 2JU2A 1L0HA 2FQ1A 3EJBA 2KOOA 4R0MA 2K93A 4NEOA 2FACA 2MY5A 2LMLA 1X3OA 2K2QA 2KR5A 2MR7A 2QNWA 3GZMA 2FQ0A 2CG5B 2KORA 4MRTC 4PWVB 2X2BA 2LTEA 3CE7A 4IZ6A 4BPHA 2FHSC 2M5RA 2KG9A 1KLPA 2KG6A 5KP8B 2GDXA 2JGPA 2LL8A 3LMOA 2KOSA 2N6YA 2CQ8A 4BPFA 2N50A 2ROQA 2KW2A 4BPGA 2KGAA 4CA3A 1HY8A 3RG2A 3EJEA 2GDYA 2LKIA 1VKUA 2FAEA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2FAD A;  2KGE A;  2MVV A;  1T8K A;  2N6Z A;  1DNY A;  2KOQ A;  2KWL A;  2DNW A;  1AF8 A;  2N5I A;  2CGQ A;  1NQ4 A;  2K0Y A;  2KGD A;  2GDW A;  2AFE A;  2FVF A;  2KGC A;  2MVU A;  2L9F A;  2EHS A;  2XZ0 D;  2FQ2 A;  2KOP A;  5HV8 A;  4DG9 A;  2KG8 A;  5EJD A;  4HKG A;  2MD9 A;  2MF4 A;  2LOL A;  2FVA A;  2LIW A;  5KP7 B;  2PNG A;  3NY7 B;  2L22 A;  2VSQ A;  2K94 A;  2AVA A;  4H2X C;  2XZ1 C;  1L0I A;  1ACP A;  2L4B A;  1OR5 A;  2N98 A;  2JQ4 A;  1F80 D;  2LIU A;  2K92 A;  3EJD A;  3GZL A;  5CZD B;  2K0X A;  2L0Q A;  2MR8 A;  2N5H A;  2JU1 A;  2EHT A;  2LPK A;  2AFD A;  1DV5 A;  4H2Y C;  5KP6 B;  1HQB A;  4PXH B;  4H2W C;  2AF8 A;  5HVC A;  2FVE A;  2CNR A;  2JU2 A;  1L0H A;  2FQ1 A;  3EJB A;  2KOO A;  4R0M A;  2K93 A;  4NEO A;  2FAC A;  2MY5 A;  2LML A;  1X3O A;  2K2Q A;  2KR5 A;  2MR7 A;  2QNW A;  3GZM A;  2FQ0 A;  2CG5 B;  2KOR A;  4MRT C;  4PWV B;  2X2B A;  2LTE A;  3CE7 A;  4IZ6 A;  4BPH A;  2FHS C;  2M5R A;  2KG9 A;  1KLP A;  2KG6 A;  5KP8 B;  2GDX A;  2JGP A;  2LL8 A;  3LMO A;  2KOS A;  2N6Y A;  2CQ8 A;  4BPF A;  2N50 A;  2ROQ A;  2KW2 A;  4BPG A;  2KGA A;  4CA3 A;  1HY8 A;  3RG2 A;  3EJE A;  2GDY A;  2LKI A;  1VKU A;  2FAE A; 
#chains in the Genus database with same CATH topology
 1UNK A;  1VQ9 P;  3CCR P;  1GPJ A;  3DS3 A;  2MVV A;  1T8K A;  2PEM A;  2N6Z A;  1DNY A;  2KOQ A;  1GXG A;  2DNW A;  4UHP B;  2QA4 P;  2EIA A;  4U0E A;  1UJZ A;  2EG5 A;  2NO8 A;  1FR2 A;  4U0F A;  2L9F A;  5HV8 A;  4DG9 A;  3I56 P;  4IPY A;  5F2O A;  2K94 A;  2XZ1 C;  1L0I A;  1ACP A;  2JQ4 A;  4U0A A;  1YJN P;  2MR8 A;  2LPK A;  1E6J P;  2BUO A;  3H4E A;  2PEI A;  5KP6 B;  3CC2 P;  2M8N A;  4XFZ A;  2FVE A;  5EW5 E;  2QEX P;  1VQP P;  5HGO A;  1L0H A;  2FQ1 A;  4QKO A;  1YJW P;  3B4Q A;  2GZI A;  4NEO A;  2MY5 A;  2JYL A;  2VLO A;  1M1K Q;  2K2Q A;  3E2D A;  3DS0 A;  2QNW A;  1K73 Q;  4PWV B;  3CC4 P;  2Z45 A;  2X2B A;  4IZ6 A;  2FHS C;  3DPH A;  1YIJ P;  2GZJ A;  2KG9 A;  5KP8 B;  2OAR A;  3LRY A;  1YJ9 P;  3HZQ A;  2CWO A;  4XRQ A;  2ROQ A;  4BPG A;  2KGA A;  2JBG A;  3G6E P;  1VQ5 P;  2FAE A;  3CPW O;  2PEO A;  1VHN A;  3DS2 A;  1W2B O;  2VLP A;  2CGQ A;  2GDW A;  1IMP A;  2AFE A;  2JYG A;  2OTJ P;  3CCE P;  1IMQ A;  2BHV A;  3CC7 P;  2LF4 A;  2EHS A;  2XZ0 D;  2KOP A;  3VRL C;  4GR2 A;  2KG8 A;  4HKG A;  4PH0 A;  2LOL A;  1VQL P;  5HGM A;  2VSQ A;  4H2X C;  2AVA A;  2L4B A;  1VQK P;  2N98 A;  3EJD A;  3H0D A;  3HYB A;  1QRJ A;  1VQM P;  2L0Q A;  2JU1 A;  1ZNV A;  4H2Y C;  3CXC O;  3CMA P;  1HQB A;  2GZF A;  4H2W C;  3CCS P;  2AF8 A;  1QVF O;  3G0V A;  3EJB A;  1E0H A;  4R0M A;  1D1D A;  1AYI A;  1X3O A;  1Q82 Q;  2JO0 A;  1RNI A;  2FQ0 A;  4GR6 A;  2M5R A;  4XFY A;  4F37 A;  1YHQ P;  1AUM A;  1BAJ A;  1BXI A;  1VQ4 P;  1CEI A;  1GXH A;  2KW2 A;  2LKI A;  1M6E X;  2K0D X;  5F2N A;  1IUQ A;  2OTL P;  4PH1 A;  4U0B A;  4XFX A;  2FAD A;  3Q20 A;  4M0I A;  1A8O A;  3CD6 P;  1NQ4 A;  2K0Y A;  1K30 A;  4QNB A;  3P05 A;  3GKL C;  1Q7Y Q;  2FVF A;  4U0D A;  5EJD A;  2MD9 A;  2MF4 A;  1VQO P;  2FVA A;  5KP7 B;  3NY7 B;  1K9M Q;  1EIA A;  1QVG O;  1K8A Q;  3B5I A;  3U43 A;  2LIU A;  2XV6 A;  3G71 P;  3DTJ A;  2KOD A;  3G29 A;  2AFD A;  1Z6M A;  1M6N A;  3MGE A;  5HVC A;  1EMV A;  3CME P;  2CNR A;  3CCU P;  2JU2 A;  1VQ6 P;  2M8P A;  4WYM A;  2K93 A;  2XXM A;  2FAC A;  3H47 A;  2VLQ A;  4COP A;  2KR5 A;  2MR7 A;  2CG5 B;  2KOR A;  4MRT C;  2LTE A;  1Q86 Q;  2GZG A;  2PY8 A;  2KG6 A;  1VQN P;  2K5X A;  2GDX A;  2Z46 A;  1RO2 A;  2JGP A;  3LMO A;  2VLN A;  4XRO A;  2CQ8 A;  1NJI Q;  2WPT A;  1M74 A;  2XT1 A;  4CA3 A;  2E1M A;  3RG2 A;  3EJE A;  2ERH A;  1MZ8 A;  2GDY A;  7CEI A;  3I55 P;  5HGN A;  2Z44 A;  3GJN A;  2KGE A;  1N8R Q;  3OW2 O;  3CCM P;  1KC8 Q;  2KWL A;  1AF8 A;  2N5I A;  3CCL P;  2KGD A;  3CCJ P;  3DS1 A;  2JAZ A;  3G26 A;  1EOQ A;  3M1M A;  1A43 A;  2L6E A;  2KGC A;  2MVU A;  2GZE A;  2FQ2 A;  2PEJ A;  5I4T G;  2LIW A;  1VQ8 P;  2PNG A;  2L22 A;  3DS4 A;  2M8L A;  5JPA A;  1S72 P;  5BS1 A;  5HGL A;  1OR5 A;  1F80 D;  3CCV P;  2K92 A;  3GZL A;  5CZD B;  2K0X A;  2N5H A;  2EHT A;  1DV5 A;  2JB0 A;  2PEK A;  2PEQ A;  3G28 A;  4PXH B;  3G1I A;  2EFJ A;  5BS2 A;  1JJ2 O;  2KOO A;  1RO0 A;  1ZMB A;  1VQ7 P;  2ONT A;  1KD1 Q;  2LML A;  5F2K A;  1YI2 P;  3GZM A;  1M90 Q;  3CE7 A;  4BPH A;  3DS5 A;  1KLP A;  1YIT P;  4U0C A;  2LL8 A;  1Q81 Q;  2KOS A;  2N6Y A;  3WBH A;  3CCQ P;  3G4S P;  4BPF A;  2N50 A;  3RG6 C;  3G21 A;  2GYK A;  2P9X A;  2PEN A;  1HY8 A;  4COC A;  1KQS O;  2DGY A;  3NTE A;  5DCK A;  1VKU A;  3G1G A; 
#chains in the Genus database with same CATH homology
 2FAD A;  2KGE A;  2MVV A;  1T8K A;  2N6Z A;  1DNY A;  2KOQ A;  2KWL A;  2DNW A;  1AF8 A;  2N5I A;  2CGQ A;  1NQ4 A;  2K0Y A;  2KGD A;  2GDW A;  2AFE A;  2FVF A;  2KGC A;  2MVU A;  2L9F A;  2EHS A;  2XZ0 D;  2FQ2 A;  2KOP A;  5HV8 A;  4DG9 A;  2KG8 A;  5EJD A;  4HKG A;  2MD9 A;  2MF4 A;  2LOL A;  2FVA A;  2LIW A;  5KP7 B;  2PNG A;  3NY7 B;  2L22 A;  2VSQ A;  2K94 A;  2AVA A;  4H2X C;  2XZ1 C;  1L0I A;  1ACP A;  2L4B A;  1OR5 A;  2N98 A;  2JQ4 A;  1F80 D;  2LIU A;  2K92 A;  3EJD A;  3GZL A;  5CZD B;  2K0X A;  2L0Q A;  2MR8 A;  2N5H A;  2JU1 A;  2EHT A;  2LPK A;  2AFD A;  1DV5 A;  4H2Y C;  5KP6 B;  1HQB A;  4PXH B;  4H2W C;  2AF8 A;  5HVC A;  2FVE A;  2CNR A;  2JU2 A;  1L0H A;  2FQ1 A;  3EJB A;  2KOO A;  4R0M A;  2K93 A;  4NEO A;  2FAC A;  2MY5 A;  2LML A;  1X3O A;  2K2Q A;  2KR5 A;  2MR7 A;  2QNW A;  3GZM A;  2FQ0 A;  2CG5 B;  2KOR A;  4MRT C;  4PWV B;  2X2B A;  2LTE A;  3CE7 A;  4IZ6 A;  4BPH A;  2FHS C;  2M5R A;  2KG9 A;  1KLP A;  2KG6 A;  5KP8 B;  2GDX A;  2JGP A;  2LL8 A;  3LMO A;  2KOS A;  2N6Y A;  2CQ8 A;  4BPF A;  2N50 A;  2ROQ A;  2KW2 A;  4BPG A;  2KGA A;  4CA3 A;  1HY8 A;  3RG2 A;  3EJE A;  2GDY A;  2LKI A;  1VKU A;  2FAE A; 
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