2L0QA

Nmr solution structure of vibrio harveyi acyl carrier protein (acp)
Total Genus 17

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
17
sequence length
80
structure length
80
Chain Sequence
GIPLSNIEERVKKIIVEQLGVDEAEVKNEASFVDDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYVNSHQ

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
3H1 (23-25)EMPTYAH4 (69-78)TI1 (27-30)TI2 (31-34)AH1 (4-19)AH2 (40-54)AH3 (60-65)Updating...
connected with : NaN
molecule tags Lipid binding protein
source organism Vibrio harveyi 1da3
publication title NMR solution structure and biophysical characterization of Vibrio harveyi acyl carrier protein A75H: effects of divalent metal ions.
pubmed doi rcsb
molecule keywords Acyl carrier protein
total genus 17
structure length 80
sequence length 80
ec nomenclature
pdb deposition date 2010-07-12

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2l0qA00
2K94A 2KG6A 2KG8A 2FQ0A 1NQ4A 2GDXA 2X2BA 1VKUA 2KORA 2N5IA 2L22A 2MVVA 2FQ2A 2AFDA 2K0YA 2QNWA 1X3OA 1AF8A 2LPKA 2FACA 2LMLA 5HV8A 1HQBA 1KLPA 2KR5A 2JGPA 2N50A 1F80D 1T8KA 4H2XC 4PXHB 3EJBA 4HKGA 2FQ1A 4NEOA 1HY8A 2LTEA 3EJDA 2GDWA 2KOOA 4R0MA 2N6YA 2FADA 2CG5B 2VSQA 3RG2A 4DG9A 2FVFA 2MR8A 2K2QA 2LOLA 5KP8B 2GDYA 2MVUA 4H2YC 2AFEA 4BPGA 4CA3A 2AVAA 1L0HA 2LL8A 2L0QA 2L4BA 5KP7B 2MR7A 2K0XA 1ACPA 2CQ8A 2KG9A 2KOQA 2LIUA 1OR5A 2JU1A 2EHSA 2MF4A 3GZMA 1DV5A 2AF8A 4IZ6A 2ROQA 2CGQA 2L9FA 2FVEA 2FVAA 2JQ4A 2FAEA 2KGDA 2KW2A 5EJDA 2KWLA 3NY7B 4MRTC 2CNRA 2MY5A 5KP6B 2KOSA 1DNYA 2XZ1C 2PNGA 2KOPA 2M5RA 4H2WC 5HVCA 2JU2A 1L0IA 2KGEA 2N5HA 3GZLA 5CZDB 2N6ZA 2LKIA 2XZ0D 2N98A 2EHTA 4BPFA 2LIWA 3CE7A 3EJEA 3LMOA 2K93A 2K92A 2MD9A 4PWVB 4BPHA 2KGCA 2DNWA 2KGAA 2FHSC
chains in the Genus database with same CATH superfamily
2K94A 2L6EA 1FR2A 3DS1A 2GDXA 3MGEA 1YHQP 5BS2A 1YITP 2N5IA 4F37A 4XROA 2NO8A 2PEIA 2QNWA 1X3OA 5HGNA 2JAZA 3CCUP 1KLPA 5F2NA 7CEIA 2LTEA 3EJDA 2N6YA 5HGMA 1Q7YQ 2GZIA 1VHNA 3DS5A 4U0FA 2MR8A 2K2QA 2LOLA 5KP8B 3CMAP 1YJWP 2QA4P 1L0HA 2L0QA 1MZ8A 3M1MA 3G26A 2DGYA 1VQKP 1ACPA 1IUQA 3LRYA 1OR5A 3G4SP 1DV5A 2PEOA 1N8RQ 3CCLP 5HGOA 2OTJP 1UNKA 2CGQA 2FVEA 5EW5E 2JYGA 2KW2A 3NY7B 2CNRA 2MY5A 3B5IA 1D1DA 2PEKA 3RG6C 2M5RA 3E2DA 2KGEA 3CCMP 2OTLP 3DS0A 2EHTA 3CE7A 4U0CA 1YI2P 2K93A 1VQNP 3G1IA 3DPHA 2PEMA 4M0IA 1GPJA 3G21A 3CXCO 1EMVA 1K30A 1BAJA 1RNIA 2PEQA 1EIAA 2JYLA 2P9XA 4COPA 1QVGO 2KODA 3CPWO 1VQ9P 5HV8A 1HQBA 2KR5A 2WPTA 2N50A 1T8KA 4H2XC 4HKGA 1CEIA 2VLNA 2GZFA 2XT1A 2M8NA 4R0MA 2M8LA 2FADA 3RG2A 1AYIA 4WYMA 2PEJA 3HZQA 4CA3A 3CCQP 2L4BA 4QKOA 5KP7B 2MR7A 5JPAA 3DS4A 2K0XA 4COCA 5F2KA 2MF4A 1YJNP 2AF8A 5I4TG 1VQ4P 2ROQA 2KWLA 3H47A 5KP6B 1BXIA 1KQSO 2PNGA 1IMPA 4H2WC 2EFJA 1M74A 5CZDB 1M1KQ 2N98A 2Z44A 3DTJA 5HGLA 2LIWA 3GKLC 4XFYA 1A43A 2MD9A 4BPHA 2KGCA 3WBHA 3G0VA 3I56P 1NJIQ 1QRJA 4PH0A 2FQ0A 2VLOA 1VKUA 1QVFO 1Q86Q 2K0DX 1KD1Q 2AFDA 1AF8A 3G1GA 2LPKA 2LMLA 3CCEP 4XRQA 3P05A 2JGPA 5BS1A 1F80D 4PXHB 3EJBA 2JB0A 4NEOA 1M90Q 2PY8A 2VSQA 1RO2A 2BUOA 2CWOA 2MVUA 4H2YC 2AFEA 2M8PA 2LL8A 1YJ9P 2QEXP 2JO0A 2Z45A 2CQ8A 2VLPA 1W2BO 2XXMA 1GXHA 2EHSA 1VQ6P 1Q82Q 2OARA 2ONTA 4IZ6A 3CCVP 2KGDA 5EJDA 1Q81Q 4U0AA 4U0EA 4XFXA 2EG5A 1DNYA 2XZ1C 2KOPA 3H4EA 3VRLC 3CCJP 2JU2A 3DS3A 2GZJA 3U43A 1Z6MA 2N6ZA 1AUMA 1K9MQ 4BPFA 3EJEA 3LMOA 2K92A 4U0DA 1VQPP 4QNBA 1IMQA 2Z46A 4XFZA 2DNWA 2KG6A 2KG8A 3G6EP 3CC2P 2BHVA 2GYKA 1NQ4A 2X2BA 1ZNVA 2KORA 2LF4A 2L22A 2PENA 1UJZA 2MVVA 2FQ2A 2K0YA 3CC7P 2GZEA 2FACA 4U0BA 1VQOP 1K8AQ 3HYBA 2FQ1A 5DCKA 1HY8A 2XV6A 1KC8Q 1VQ7P 1E6JP 2GDWA 2KOOA 5F2OA 2JBGA 1VQLP 2CG5B 4DG9A 3CD6P 3CMEP 2FVFA 4PH1A 1A8OA 2GDYA 3B4QA 3G28A 2EIAA 1EOQA 4BPGA 2AVAA 2GZGA 1JJ2O 3DS2A 2FHSC 1RO0A 1E0HA 1M6NA 2KG9A 2LIUA 2KOQA 1VQ8P 3CCRP 2JU1A 3CCSP 2VLQA 3GZMA 3G71P 3GJNA 3Q20A 4IPYA 2L9FA 3OW2O 2FVAA 1GXGA 2FAEA 2JQ4A 3NTEA 1VQMP 3CC4P 4MRTC 1ZMBA 4GR6A 1S72P 2KOSA 1VQ5P 5HVCA 1L0IA 4UHPB 2N5HA 3H0DA 3GZLA 2LKIA 2XZ0D 3G29A 2K5XA 2ERHA 2E1MA 1M6EX 4GR2A 4PWVB 3I55P 1K73Q 2KGAA 1YIJP
chains in the Genus database with same CATH topology
2K94A 2KG6A 2KG8A 2FQ0A 1NQ4A 2GDXA 2X2BA 1VKUA 2KORA 2N5IA 2L22A 2MVVA 2FQ2A 2AFDA 2K0YA 2QNWA 1X3OA 1AF8A 2LPKA 2FACA 2LMLA 5HV8A 1HQBA 1KLPA 2KR5A 2JGPA 2N50A 1F80D 1T8KA 4H2XC 4PXHB 3EJBA 4HKGA 2FQ1A 4NEOA 1HY8A 2LTEA 3EJDA 2GDWA 2KOOA 4R0MA 2N6YA 2FADA 2CG5B 2VSQA 3RG2A 4DG9A 2FVFA 2MR8A 2K2QA 2LOLA 5KP8B 2GDYA 2MVUA 4H2YC 2AFEA 4BPGA 4CA3A 2AVAA 1L0HA 2LL8A 2L0QA 2L4BA 5KP7B 2MR7A 2K0XA 1ACPA 2CQ8A 2KG9A 2KOQA 2LIUA 1OR5A 2JU1A 2EHSA 2MF4A 3GZMA 1DV5A 2AF8A 4IZ6A 2ROQA 2CGQA 2L9FA 2FVEA 2FVAA 2JQ4A 2FAEA 2KGDA 2KW2A 5EJDA 2KWLA 3NY7B 4MRTC 2CNRA 2MY5A 5KP6B 2KOSA 1DNYA 2XZ1C 2PNGA 2KOPA 2M5RA 4H2WC 5HVCA 2JU2A 1L0IA 2KGEA 2N5HA 3GZLA 5CZDB 2N6ZA 2LKIA 2XZ0D 2N98A 2EHTA 4BPFA 2LIWA 3CE7A 3EJEA 3LMOA 2K93A 2K92A 2MD9A 4PWVB 4BPHA 2KGCA 2DNWA 2KGAA 2FHSC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2K94 A;  2KG6 A;  2KG8 A;  2FQ0 A;  1NQ4 A;  2GDX A;  2X2B A;  1VKU A;  2KOR A;  2N5I A;  2L22 A;  2MVV A;  2FQ2 A;  2AFD A;  2K0Y A;  2QNW A;  1X3O A;  1AF8 A;  2LPK A;  2FAC A;  2LML A;  5HV8 A;  1HQB A;  1KLP A;  2KR5 A;  2JGP A;  2N50 A;  1F80 D;  1T8K A;  4H2X C;  4PXH B;  3EJB A;  4HKG A;  2FQ1 A;  4NEO A;  1HY8 A;  2LTE A;  3EJD A;  2GDW A;  2KOO A;  4R0M A;  2N6Y A;  2FAD A;  2CG5 B;  2VSQ A;  3RG2 A;  4DG9 A;  2FVF A;  2MR8 A;  2K2Q A;  2LOL A;  5KP8 B;  2GDY A;  2MVU A;  4H2Y C;  2AFE A;  4BPG A;  4CA3 A;  2AVA A;  1L0H A;  2LL8 A;  2L0Q A;  2L4B A;  5KP7 B;  2MR7 A;  2K0X A;  1ACP A;  2CQ8 A;  2KG9 A;  2KOQ A;  2LIU A;  1OR5 A;  2JU1 A;  2EHS A;  2MF4 A;  3GZM A;  1DV5 A;  2AF8 A;  4IZ6 A;  2ROQ A;  2CGQ A;  2L9F A;  2FVE A;  2FVA A;  2JQ4 A;  2FAE A;  2KGD A;  2KW2 A;  5EJD A;  2KWL A;  3NY7 B;  4MRT C;  2CNR A;  2MY5 A;  5KP6 B;  2KOS A;  1DNY A;  2XZ1 C;  2PNG A;  2KOP A;  2M5R A;  4H2W C;  5HVC A;  2JU2 A;  1L0I A;  2KGE A;  2N5H A;  3GZL A;  5CZD B;  2N6Z A;  2LKI A;  2XZ0 D;  2N98 A;  2EHT A;  4BPF A;  2LIW A;  3CE7 A;  3EJE A;  3LMO A;  2K93 A;  2K92 A;  2MD9 A;  4PWV B;  4BPH A;  2KGC A;  2DNW A;  2KGA A;  2FHS C; 
#chains in the Genus database with same CATH topology
 2K94 A;  2L6E A;  1FR2 A;  3DS1 A;  2GDX A;  3MGE A;  1YHQ P;  5BS2 A;  1YIT P;  2N5I A;  4F37 A;  4XRO A;  2NO8 A;  2PEI A;  2QNW A;  1X3O A;  5HGN A;  2JAZ A;  3CCU P;  1KLP A;  5F2N A;  7CEI A;  2LTE A;  3EJD A;  2N6Y A;  5HGM A;  1Q7Y Q;  2GZI A;  1VHN A;  3DS5 A;  4U0F A;  2MR8 A;  2K2Q A;  2LOL A;  5KP8 B;  3CMA P;  1YJW P;  2QA4 P;  1L0H A;  2L0Q A;  1MZ8 A;  3M1M A;  3G26 A;  2DGY A;  1VQK P;  1ACP A;  1IUQ A;  3LRY A;  1OR5 A;  3G4S P;  1DV5 A;  2PEO A;  1N8R Q;  3CCL P;  5HGO A;  2OTJ P;  1UNK A;  2CGQ A;  2FVE A;  5EW5 E;  2JYG A;  2KW2 A;  3NY7 B;  2CNR A;  2MY5 A;  3B5I A;  1D1D A;  2PEK A;  3RG6 C;  2M5R A;  3E2D A;  2KGE A;  3CCM P;  2OTL P;  3DS0 A;  2EHT A;  3CE7 A;  4U0C A;  1YI2 P;  2K93 A;  1VQN P;  3G1I A;  3DPH A;  2PEM A;  4M0I A;  1GPJ A;  3G21 A;  3CXC O;  1EMV A;  1K30 A;  1BAJ A;  1RNI A;  2PEQ A;  1EIA A;  2JYL A;  2P9X A;  4COP A;  1QVG O;  2KOD A;  3CPW O;  1VQ9 P;  5HV8 A;  1HQB A;  2KR5 A;  2WPT A;  2N50 A;  1T8K A;  4H2X C;  4HKG A;  1CEI A;  2VLN A;  2GZF A;  2XT1 A;  2M8N A;  4R0M A;  2M8L A;  2FAD A;  3RG2 A;  1AYI A;  4WYM A;  2PEJ A;  3HZQ A;  4CA3 A;  3CCQ P;  2L4B A;  4QKO A;  5KP7 B;  2MR7 A;  5JPA A;  3DS4 A;  2K0X A;  4COC A;  5F2K A;  2MF4 A;  1YJN P;  2AF8 A;  5I4T G;  1VQ4 P;  2ROQ A;  2KWL A;  3H47 A;  5KP6 B;  1BXI A;  1KQS O;  2PNG A;  1IMP A;  4H2W C;  2EFJ A;  1M74 A;  5CZD B;  1M1K Q;  2N98 A;  2Z44 A;  3DTJ A;  5HGL A;  2LIW A;  3GKL C;  4XFY A;  1A43 A;  2MD9 A;  4BPH A;  2KGC A;  3WBH A;  3G0V A;  3I56 P;  1NJI Q;  1QRJ A;  4PH0 A;  2FQ0 A;  2VLO A;  1VKU A;  1QVF O;  1Q86 Q;  2K0D X;  1KD1 Q;  2AFD A;  1AF8 A;  3G1G A;  2LPK A;  2LML A;  3CCE P;  4XRQ A;  3P05 A;  2JGP A;  5BS1 A;  1F80 D;  4PXH B;  3EJB A;  2JB0 A;  4NEO A;  1M90 Q;  2PY8 A;  2VSQ A;  1RO2 A;  2BUO A;  2CWO A;  2MVU A;  4H2Y C;  2AFE A;  2M8P A;  2LL8 A;  1YJ9 P;  2QEX P;  2JO0 A;  2Z45 A;  2CQ8 A;  2VLP A;  1W2B O;  2XXM A;  1GXH A;  2EHS A;  1VQ6 P;  1Q82 Q;  2OAR A;  2ONT A;  4IZ6 A;  3CCV P;  2KGD A;  5EJD A;  1Q81 Q;  4U0A A;  4U0E A;  4XFX A;  2EG5 A;  1DNY A;  2XZ1 C;  2KOP A;  3H4E A;  3VRL C;  3CCJ P;  2JU2 A;  3DS3 A;  2GZJ A;  3U43 A;  1Z6M A;  2N6Z A;  1AUM A;  1K9M Q;  4BPF A;  3EJE A;  3LMO A;  2K92 A;  4U0D A;  1VQP P;  4QNB A;  1IMQ A;  2Z46 A;  4XFZ A;  2DNW A;  2KG6 A;  2KG8 A;  3G6E P;  3CC2 P;  2BHV A;  2GYK A;  1NQ4 A;  2X2B A;  1ZNV A;  2KOR A;  2LF4 A;  2L22 A;  2PEN A;  1UJZ A;  2MVV A;  2FQ2 A;  2K0Y A;  3CC7 P;  2GZE A;  2FAC A;  4U0B A;  1VQO P;  1K8A Q;  3HYB A;  2FQ1 A;  5DCK A;  1HY8 A;  2XV6 A;  1KC8 Q;  1VQ7 P;  1E6J P;  2GDW A;  2KOO A;  5F2O A;  2JBG A;  1VQL P;  2CG5 B;  4DG9 A;  3CD6 P;  3CME P;  2FVF A;  4PH1 A;  1A8O A;  2GDY A;  3B4Q A;  3G28 A;  2EIA A;  1EOQ A;  4BPG A;  2AVA A;  2GZG A;  1JJ2 O;  3DS2 A;  2FHS C;  1RO0 A;  1E0H A;  1M6N A;  2KG9 A;  2LIU A;  2KOQ A;  1VQ8 P;  3CCR P;  2JU1 A;  3CCS P;  2VLQ A;  3GZM A;  3G71 P;  3GJN A;  3Q20 A;  4IPY A;  2L9F A;  3OW2 O;  2FVA A;  1GXG A;  2FAE A;  2JQ4 A;  3NTE A;  1VQM P;  3CC4 P;  4MRT C;  1ZMB A;  4GR6 A;  1S72 P;  2KOS A;  1VQ5 P;  5HVC A;  1L0I A;  4UHP B;  2N5H A;  3H0D A;  3GZL A;  2LKI A;  2XZ0 D;  3G29 A;  2K5X A;  2ERH A;  2E1M A;  1M6E X;  4GR2 A;  4PWV B;  3I55 P;  1K73 Q;  2KGA A;  1YIJ P; 
#chains in the Genus database with same CATH homology
 2K94 A;  2KG6 A;  2KG8 A;  2FQ0 A;  1NQ4 A;  2GDX A;  2X2B A;  1VKU A;  2KOR A;  2N5I A;  2L22 A;  2MVV A;  2FQ2 A;  2AFD A;  2K0Y A;  2QNW A;  1X3O A;  1AF8 A;  2LPK A;  2FAC A;  2LML A;  5HV8 A;  1HQB A;  1KLP A;  2KR5 A;  2JGP A;  2N50 A;  1F80 D;  1T8K A;  4H2X C;  4PXH B;  3EJB A;  4HKG A;  2FQ1 A;  4NEO A;  1HY8 A;  2LTE A;  3EJD A;  2GDW A;  2KOO A;  4R0M A;  2N6Y A;  2FAD A;  2CG5 B;  2VSQ A;  3RG2 A;  4DG9 A;  2FVF A;  2MR8 A;  2K2Q A;  2LOL A;  5KP8 B;  2GDY A;  2MVU A;  4H2Y C;  2AFE A;  4BPG A;  4CA3 A;  2AVA A;  1L0H A;  2LL8 A;  2L0Q A;  2L4B A;  5KP7 B;  2MR7 A;  2K0X A;  1ACP A;  2CQ8 A;  2KG9 A;  2KOQ A;  2LIU A;  1OR5 A;  2JU1 A;  2EHS A;  2MF4 A;  3GZM A;  1DV5 A;  2AF8 A;  4IZ6 A;  2ROQ A;  2CGQ A;  2L9F A;  2FVE A;  2FVA A;  2JQ4 A;  2FAE A;  2KGD A;  2KW2 A;  5EJD A;  2KWL A;  3NY7 B;  4MRT C;  2CNR A;  2MY5 A;  5KP6 B;  2KOS A;  1DNY A;  2XZ1 C;  2PNG A;  2KOP A;  2M5R A;  4H2W C;  5HVC A;  2JU2 A;  1L0I A;  2KGE A;  2N5H A;  3GZL A;  5CZD B;  2N6Z A;  2LKI A;  2XZ0 D;  2N98 A;  2EHT A;  4BPF A;  2LIW A;  3CE7 A;  3EJE A;  3LMO A;  2K93 A;  2K92 A;  2MD9 A;  4PWV B;  4BPH A;  2KGC A;  2DNW A;  2KGA A;  2FHS C; 
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similar chains in the pdb database (?% sequence similarity)

 
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