2N50 | Genus

Total Genus 20

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	20
sequence length	79
structure length	79
Chain Sequence	MTREEVLQKVAKIISNHFDIEADQVTDQLNIKDDLNADSISVMEFVLELEDEFGTEISDEDAEKIETVGAAVDYIVSNS

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

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After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Biosynthetic protein
source organism	Enterococcus faecalis v583
publication title	Novel Structural Components Contribute to the High Thermal Stability of Acyl Carrier Protein from Enterococcus faecalis. pubmed doi rcsb
molecule keywords	Acyl carrier protein
total genus	20
structure length	79
sequence length	79
ec nomenclature
pdb deposition date	2015-07-02

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
A	PF00550	PP-binding	Phosphopantetheine attachment site

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
1.10.1200.10	Mainly Alpha	Orthogonal Bundle	Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A	ACP-like	2n50A00

2ROQA 2MVVA 2EHSA 1DV5A 2FQ0A 1VKUA 2LOLA 2FACA 2K94A 4BPGA 2KG9A 1X3OA 2KR5A 2KWLA 3CE7A 2KOPA 2AVAA 5KP7B 4BPHA 3GZMA 3GZLA 2KOOA 4HKGA 3NY7B 2FAEA 4PXHB 2FADA 2MR7A 2XZ1C 2K0YA 4H2WC 2PNGA 2JU1A 2FVEA 2K93A 2K2QA 2N5IA 2LPKA 2FHSC 1DNYA 2N6ZA 2KGCA 4H2YC 5CZDB 2L4BA 2GDWA 3EJDA 3RG2A 5KP8B 2FVAA 1F80D 1AF8A 2LIWA 5HVCA 2AFEA 2AF8A 2FQ1A 5EJDA 2N50A 2LMLA 2EHTA 2KGAA 2LL8A 2N5HA 4H2XC 4PWVB 2VSQA 2FVFA 2KOSA 2GDYA 4IZ6A 5HV8A 2CNRA 2DNWA 2MD9A 1OR5A 3LMOA 2L9FA 2JQ4A 2XZ0D 2KW2A 2MF4A 2QNWA 4BPFA 4NEOA 2K92A 3EJBA 2CGQA 2LTEA 1ACPA 2MY5A 2KGDA 2MVUA 2AFDA 2M5RA 1T8KA 3EJEA 2KG6A 2KG8A 2KGEA 2N98A 4R0MA 2K0XA 2L0QA 1L0IA 1L0HA 2CG5B 2X2BA 2GDXA 2FQ2A 2N6YA 4MRTC 2LKIA 4DG9A 2CQ8A 1HQBA 5KP6B 2MR8A 2JGPA 1NQ4A 2KOQA 1HY8A 2JU2A 2LIUA 2KORA 1KLPA 4CA3A 2L22A
chains in the Genus database with same CATH superfamily

2ROQA 1QRJA 2L6EA 2FQ0A 3DS1A 3DS2A 2XV6A 3G1IA 2K94A 2KR5A 1YJ9P 1M1KQ 1KC8Q 3GZLA 2JB0A 2KOOA 2GZEA 2FADA 2NO8A 5F2KA 3OW2O 2Z45A 2PY8A 1YI2P 2FVEA 1VQKP 2N5IA 1RNIA 3H47A 1IMPA 3I56P 3CPWO 5CZDB 4U0EA 4XRQA 2FVAA 3CC2P 5HVCA 3DPHA 3M1MA 2DGYA 3WBHA 3G4SP 1VQ8P 2LMLA 1GXGA 2K0DX 3CMEP 4PH0A 2JQ4A 2GZIA 4GR2A 1YHQP 2VLNA 1VQ7P 2MVUA 2BUOA 3LRYA 3NTEA 2EIAA 2KG6A 1BAJA 2EG5A 2N98A 3HZQA 2K0XA 1M6NA 5F2OA 1L0HA 2CG5B 2JO0A 1QVFO 3CCRP 2LKIA 4GR6A 2JAZA 5KP6B 1NJIQ 1K9MQ 4QKOA 1S72P 2JU2A 3CMAP 1YIJP 2L22A 2K5XA 2MVVA 1Q82Q 2LOLA 3CC4P 2FACA 3CCJP 3CE7A 3G1GA 2KOPA 3G21A 1YJWP 5KP7B 4BPHA 3GZMA 3G6EP 2EFJA 1YJNP 3DS5A 1ZNVA 2PEMA 2K0YA 1Q7YQ 3CXCO 2E1MA 2M8PA 2LPKA 1DNYA 2ERHA 2XXMA 2KGCA 1A43A 5KP8B 1AF8A 1F80D 3G71P 1EIAA 5EW5E 1MZ8A 2FQ1A 4M0IA 2N50A 1N8RQ 2N5HA 4PWVB 2QA4P 3CCUP 3CCEP 2KOSA 4IZ6A 3G26A 2JYLA 3LMOA 4XFYA 2KW2A 1FR2A 2QNWA 2GZFA 3G29A 2OTLP 3DTJA 1K8AQ 2MY5A 1E6JP 5HGOA 4QNBA 2M5RA 4U0BA 5HGNA 2GZGA 1VQLP 3CD6P 2QEXP 3CCVP 2P9XA 1L0IA 2PENA 1VQ5P 4U0FA 3I55P 2GDXA 2FQ2A 4MRTC 1Z6MA 2CQ8A 1HQBA 5F2NA 2WPTA 2OTJP 2JGPA 1EOQA 1NQ4A 2KOQA 2LIUA 2VLPA 5HGMA 1VKUA 3GKLC 4BPGA 7CEIA 1X3OA 2KWLA 3G0VA 1VQPP 4XFZA 1EMVA 1UJZA 4U0AA 2CWOA 3G28A 3DS3A 1UNKA 2FAEA 1M90Q 5BS1A 4H2WC 2PNGA 2JU1A 2K2QA 2FHSC 2N6ZA 4H2YC 2GDWA 3EJDA 1IMQA 1YITP 3CC7P 3H0DA 2AFEA 2AF8A 3GJNA 4F37A 1VQ4P 1M74A 1Q86Q 4WYMA 4H2XC 1K73Q 2FVFA 2PEOA 5I4TG 5BS2A 1VQMP 3CCQP 2CNRA 2MD9A 1OR5A 2L9FA 2Z46A 2XZ0D 2M8LA 2MF4A 1JJ2O 4BPFA 3EJBA 2VLQA 2LTEA 2KGDA 1AUMA 1T8KA 2Z44A 2OARA 2KG8A 1GXHA 2L0QA 4IPYA 3B4QA 4U0CA 1QVGO 1VQ6P 2N6YA 2M8NA 2VLOA 1VHNA 2MR8A 1VQ9P 1Q81Q 3Q20A 1RO2A 4CA3A 3U43A 2EHSA 1DV5A 1CEIA 1E0HA 2PEIA 1BXIA 2KG9A 3B5IA 2AVAA 4HKGA 2GYKA 4COPA 4XFXA 3NY7B 1KD1Q 3E2DA 4PXHB 2MR7A 2XZ1C 1KQSO 3VRLC 2K93A 1W2BO 3CCLP 2L4BA 3RG2A 2LIWA 2PEQA 1VQNP 2PEKA 5EJDA 5HGLA 2GZJA 4UHPB 2EHTA 2KGAA 3CCMP 2LL8A 3MGEA 2JBGA 2VSQA 2GDYA 5HV8A 2DNWA 4XROA 1RO0A 1GPJA 3DS0A 3H4EA 3P05A 4COCA 1A8OA 2LF4A 4NEOA 2K92A 1IUQA 1K30A 2CGQA 2ONTA 2JYGA 1ACPA 2AFDA 2BHVA 2KODA 3EJEA 2KGEA 1M6EX 4R0MA 1AYIA 3HYBA 1ZMBA 2X2BA 2XT1A 3RG6C 2PEJA 1D1DA 4DG9A 5JPAA 3CCSP 1HY8A 1VQOP 4U0DA 2KORA 3DS4A 1KLPA 4PH1A 5DCKA
chains in the Genus database with same CATH topology

#chains in the Genus database with same CATH superfamily
 2ROQ A;  2MVV A;  2EHS A;  1DV5 A;  2FQ0 A;  1VKU A;  2LOL A;  2FAC A;  2K94 A;  4BPG A;  2KG9 A;  1X3O A;  2KR5 A;  2KWL A;  3CE7 A;  2KOP A;  2AVA A;  5KP7 B;  4BPH A;  3GZM A;  3GZL A;  2KOO A;  4HKG A;  3NY7 B;  2FAE A;  4PXH B;  2FAD A;  2MR7 A;  2XZ1 C;  2K0Y A;  4H2W C;  2PNG A;  2JU1 A;  2FVE A;  2K93 A;  2K2Q A;  2N5I A;  2LPK A;  2FHS C;  1DNY A;  2N6Z A;  2KGC A;  4H2Y C;  5CZD B;  2L4B A;  2GDW A;  3EJD A;  3RG2 A;  5KP8 B;  2FVA A;  1F80 D;  1AF8 A;  2LIW A;  5HVC A;  2AFE A;  2AF8 A;  2FQ1 A;  5EJD A;  2N50 A;  2LML A;  2EHT A;  2KGA A;  2LL8 A;  2N5H A;  4H2X C;  4PWV B;  2VSQ A;  2FVF A;  2KOS A;  2GDY A;  4IZ6 A;  5HV8 A;  2CNR A;  2DNW A;  2MD9 A;  1OR5 A;  3LMO A;  2L9F A;  2JQ4 A;  2XZ0 D;  2KW2 A;  2MF4 A;  2QNW A;  4BPF A;  4NEO A;  2K92 A;  3EJB A;  2CGQ A;  2LTE A;  1ACP A;  2MY5 A;  2KGD A;  2MVU A;  2AFD A;  2M5R A;  1T8K A;  3EJE A;  2KG6 A;  2KG8 A;  2KGE A;  2N98 A;  4R0M A;  2K0X A;  2L0Q A;  1L0I A;  1L0H A;  2CG5 B;  2X2B A;  2GDX A;  2FQ2 A;  2N6Y A;  4MRT C;  2LKI A;  4DG9 A;  2CQ8 A;  1HQB A;  5KP6 B;  2MR8 A;  2JGP A;  1NQ4 A;  2KOQ A;  1HY8 A;  2JU2 A;  2LIU A;  2KOR A;  1KLP A;  4CA3 A;  2L22 A; 
#chains in the Genus database with same CATH topology
 2ROQ A;  1QRJ A;  2L6E A;  2FQ0 A;  3DS1 A;  3DS2 A;  2XV6 A;  3G1I A;  2K94 A;  2KR5 A;  1YJ9 P;  1M1K Q;  1KC8 Q;  3GZL A;  2JB0 A;  2KOO A;  2GZE A;  2FAD A;  2NO8 A;  5F2K A;  3OW2 O;  2Z45 A;  2PY8 A;  1YI2 P;  2FVE A;  1VQK P;  2N5I A;  1RNI A;  3H47 A;  1IMP A;  3I56 P;  3CPW O;  5CZD B;  4U0E A;  4XRQ A;  2FVA A;  3CC2 P;  5HVC A;  3DPH A;  3M1M A;  2DGY A;  3WBH A;  3G4S P;  1VQ8 P;  2LML A;  1GXG A;  2K0D X;  3CME P;  4PH0 A;  2JQ4 A;  2GZI A;  4GR2 A;  1YHQ P;  2VLN A;  1VQ7 P;  2MVU A;  2BUO A;  3LRY A;  3NTE A;  2EIA A;  2KG6 A;  1BAJ A;  2EG5 A;  2N98 A;  3HZQ A;  2K0X A;  1M6N A;  5F2O A;  1L0H A;  2CG5 B;  2JO0 A;  1QVF O;  3CCR P;  2LKI A;  4GR6 A;  2JAZ A;  5KP6 B;  1NJI Q;  1K9M Q;  4QKO A;  1S72 P;  2JU2 A;  3CMA P;  1YIJ P;  2L22 A;  2K5X A;  2MVV A;  1Q82 Q;  2LOL A;  3CC4 P;  2FAC A;  3CCJ P;  3CE7 A;  3G1G A;  2KOP A;  3G21 A;  1YJW P;  5KP7 B;  4BPH A;  3GZM A;  3G6E P;  2EFJ A;  1YJN P;  3DS5 A;  1ZNV A;  2PEM A;  2K0Y A;  1Q7Y Q;  3CXC O;  2E1M A;  2M8P A;  2LPK A;  1DNY A;  2ERH A;  2XXM A;  2KGC A;  1A43 A;  5KP8 B;  1AF8 A;  1F80 D;  3G71 P;  1EIA A;  5EW5 E;  1MZ8 A;  2FQ1 A;  4M0I A;  2N50 A;  1N8R Q;  2N5H A;  4PWV B;  2QA4 P;  3CCU P;  3CCE P;  2KOS A;  4IZ6 A;  3G26 A;  2JYL A;  3LMO A;  4XFY A;  2KW2 A;  1FR2 A;  2QNW A;  2GZF A;  3G29 A;  2OTL P;  3DTJ A;  1K8A Q;  2MY5 A;  1E6J P;  5HGO A;  4QNB A;  2M5R A;  4U0B A;  5HGN A;  2GZG A;  1VQL P;  3CD6 P;  2QEX P;  3CCV P;  2P9X A;  1L0I A;  2PEN A;  1VQ5 P;  4U0F A;  3I55 P;  2GDX A;  2FQ2 A;  4MRT C;  1Z6M A;  2CQ8 A;  1HQB A;  5F2N A;  2WPT A;  2OTJ P;  2JGP A;  1EOQ A;  1NQ4 A;  2KOQ A;  2LIU A;  2VLP A;  5HGM A;  1VKU A;  3GKL C;  4BPG A;  7CEI A;  1X3O A;  2KWL A;  3G0V A;  1VQP P;  4XFZ A;  1EMV A;  1UJZ A;  4U0A A;  2CWO A;  3G28 A;  3DS3 A;  1UNK A;  2FAE A;  1M90 Q;  5BS1 A;  4H2W C;  2PNG A;  2JU1 A;  2K2Q A;  2FHS C;  2N6Z A;  4H2Y C;  2GDW A;  3EJD A;  1IMQ A;  1YIT P;  3CC7 P;  3H0D A;  2AFE A;  2AF8 A;  3GJN A;  4F37 A;  1VQ4 P;  1M74 A;  1Q86 Q;  4WYM A;  4H2X C;  1K73 Q;  2FVF A;  2PEO A;  5I4T G;  5BS2 A;  1VQM P;  3CCQ P;  2CNR A;  2MD9 A;  1OR5 A;  2L9F A;  2Z46 A;  2XZ0 D;  2M8L A;  2MF4 A;  1JJ2 O;  4BPF A;  3EJB A;  2VLQ A;  2LTE A;  2KGD A;  1AUM A;  1T8K A;  2Z44 A;  2OAR A;  2KG8 A;  1GXH A;  2L0Q A;  4IPY A;  3B4Q A;  4U0C A;  1QVG O;  1VQ6 P;  2N6Y A;  2M8N A;  2VLO A;  1VHN A;  2MR8 A;  1VQ9 P;  1Q81 Q;  3Q20 A;  1RO2 A;  4CA3 A;  3U43 A;  2EHS A;  1DV5 A;  1CEI A;  1E0H A;  2PEI A;  1BXI A;  2KG9 A;  3B5I A;  2AVA A;  4HKG A;  2GYK A;  4COP A;  4XFX A;  3NY7 B;  1KD1 Q;  3E2D A;  4PXH B;  2MR7 A;  2XZ1 C;  1KQS O;  3VRL C;  2K93 A;  1W2B O;  3CCL P;  2L4B A;  3RG2 A;  2LIW A;  2PEQ A;  1VQN P;  2PEK A;  5EJD A;  5HGL A;  2GZJ A;  4UHP B;  2EHT A;  2KGA A;  3CCM P;  2LL8 A;  3MGE A;  2JBG A;  2VSQ A;  2GDY A;  5HV8 A;  2DNW A;  4XRO A;  1RO0 A;  1GPJ A;  3DS0 A;  3H4E A;  3P05 A;  4COC A;  1A8O A;  2LF4 A;  4NEO A;  2K92 A;  1IUQ A;  1K30 A;  2CGQ A;  2ONT A;  2JYG A;  1ACP A;  2AFD A;  2BHV A;  2KOD A;  3EJE A;  2KGE A;  1M6E X;  4R0M A;  1AYI A;  3HYB A;  1ZMB A;  2X2B A;  2XT1 A;  3RG6 C;  2PEJ A;  1D1D A;  4DG9 A;  5JPA A;  3CCS P;  1HY8 A;  1VQO P;  4U0D A;  2KOR A;  3DS4 A;  1KLP A;  4PH1 A;  5DCK A; 
#chains in the Genus database with same CATH homology
 2ROQ A;  2MVV A;  2EHS A;  1DV5 A;  2FQ0 A;  1VKU A;  2LOL A;  2FAC A;  2K94 A;  4BPG A;  2KG9 A;  1X3O A;  2KR5 A;  2KWL A;  3CE7 A;  2KOP A;  2AVA A;  5KP7 B;  4BPH A;  3GZM A;  3GZL A;  2KOO A;  4HKG A;  3NY7 B;  2FAE A;  4PXH B;  2FAD A;  2MR7 A;  2XZ1 C;  2K0Y A;  4H2W C;  2PNG A;  2JU1 A;  2FVE A;  2K93 A;  2K2Q A;  2N5I A;  2LPK A;  2FHS C;  1DNY A;  2N6Z A;  2KGC A;  4H2Y C;  5CZD B;  2L4B A;  2GDW A;  3EJD A;  3RG2 A;  5KP8 B;  2FVA A;  1F80 D;  1AF8 A;  2LIW A;  5HVC A;  2AFE A;  2AF8 A;  2FQ1 A;  5EJD A;  2N50 A;  2LML A;  2EHT A;  2KGA A;  2LL8 A;  2N5H A;  4H2X C;  4PWV B;  2VSQ A;  2FVF A;  2KOS A;  2GDY A;  4IZ6 A;  5HV8 A;  2CNR A;  2DNW A;  2MD9 A;  1OR5 A;  3LMO A;  2L9F A;  2JQ4 A;  2XZ0 D;  2KW2 A;  2MF4 A;  2QNW A;  4BPF A;  4NEO A;  2K92 A;  3EJB A;  2CGQ A;  2LTE A;  1ACP A;  2MY5 A;  2KGD A;  2MVU A;  2AFD A;  2M5R A;  1T8K A;  3EJE A;  2KG6 A;  2KG8 A;  2KGE A;  2N98 A;  4R0M A;  2K0X A;  2L0Q A;  1L0I A;  1L0H A;  2CG5 B;  2X2B A;  2GDX A;  2FQ2 A;  2N6Y A;  4MRT C;  2LKI A;  4DG9 A;  2CQ8 A;  1HQB A;  5KP6 B;  2MR8 A;  2JGP A;  1NQ4 A;  2KOQ A;  1HY8 A;  2JU2 A;  2LIU A;  2KOR A;  1KLP A;  4CA3 A;  2L22 A;

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similar chains in the Genus database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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2N50A

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN

pfam database annotations