2N6YA

Solution structure of holo arcp from yersiniabactin synthetase
Total Genus 29

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
29
sequence length
80
structure length
79
Chain Sequence
DNRHAADYQQLRERLIQELNLTPQQLHEESNLIQAGLDIRLMRWLHWFRKNGYRLTLRELYAAPTLAAWNQLMLSRSPE

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
3H1 (17-23)TIV2 (37-40)TI2 (40-43)3H3 (63-65)AH1 (24-32)EMPTYTI1 (35-38)TIV1 (36-39)3H2 (46-48)AH2 (53-62)O1 (77-79)AH3 (71-76)Updating...
connected with : NaN
molecule tags Ligase
source organism Yersinia pestis
publication title Solution Structure of a Nonribosomal Peptide Synthetase Carrier Protein Loaded with Its Substrate Reveals Transient, Well-Defined Contacts.
pubmed doi rcsb
molecule keywords HMWP2 nonribosomal peptide synthetase
total genus 29
structure length 79
sequence length 80
ec nomenclature
pdb deposition date 2015-08-31

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2n6yA00
4IZ6A 2CNRA 2K2QA 5HVCA 2LMLA 2LOLA 5CZDB 2EHSA 3RG2A 4PXHB 2KGCA 1AF8A 2JU2A 2FQ0A 2GDYA 2JU1A 1OR5A 1L0HA 2FQ1A 2L0QA 5KP8B 1KLPA 3CE7A 2LIUA 2KR5A 2MR7A 2KW2A 2KWLA 2N5HA 2KGDA 2LIWA 2KOPA 1T8KA 2GDWA 2L4BA 2L22A 2N6YA 1DV5A 4R0MA 2X2BA 4H2XC 2L9FA 2FVEA 2FVFA 2K0YA 2LL8A 2K92A 2M5RA 3GZMA 1ACPA 2KORA 2JQ4A 2DNWA 5KP6B 2KOSA 2MY5A 4PWVB 2KG8A 3EJEA 4CA3A 4HKGA 2QNWA 2FAEA 2FHSC 1NQ4A 3LMOA 2KOQA 2AFDA 2KGEA 2N98A 2KG9A 2LPKA 3NY7B 4NEOA 1X3OA 2KGAA 1F80D 2FVAA 2FQ2A 2MVUA 1VKUA 2KG6A 2MD9A 4H2YC 2PNGA 2AFEA 3EJBA 5HV8A 4DG9A 2EHTA 2VSQA 2LTEA 2XZ0D 3GZLA 2MR8A 2N6ZA 4BPFA 1HY8A 2FACA 2GDXA 2JGPA 1HQBA 3EJDA 4H2WC 4MRTC 2N5IA 2K0XA 1DNYA 4BPHA 2N50A 4BPGA 2K93A 2CG5B 2MVVA 5KP7B 2XZ1C 1L0IA 5EJDA 2LKIA 2KOOA 2AVAA 2MF4A 2CGQA 2AF8A 2CQ8A 2K94A 2FADA 2ROQA
chains in the Genus database with same CATH superfamily
1W2BO 4COPA 5HVCA 4COCA 2PY8A 3B4QA 3VRLC 3CC4P 4PXHB 2PEMA 1VQ8P 1AF8A 4IPYA 1AYIA 3DS1A 1MZ8A 1VHNA 3CC7P 2KW2A 2N5HA 2K5XA 1A43A 4U0FA 1E0HA 1VQ7P 3H4EA 1Q86Q 4F37A 2FVEA 5F2OA 3DS3A 2BHVA 3G1IA 2Z44A 2JAZA 2QA4P 4PH0A 3EJEA 2FAEA 2GZIA 1FR2A 1NQ4A 2KOQA 3CD6P 2AFDA 2KG9A 3DS2A 2JB0A 2LPKA 2KGAA 1F80D 3CC2P 2ERHA 4U0DA 3G71P 2PNGA 2AFEA 3EJBA 4U0AA 4DG9A 2JYGA 2VSQA 2MR8A 5F2NA 3CCSP 1HQBA 2N5IA 1DNYA 2M8LA 1GPJA 4BPGA 2K93A 2CG5B 3OW2O 5KP7B 4XFXA 1YITP 3CCRP 2OTLP 2MF4A 2EG5A 1VQ5P 4QNBA 3HYBA 7CEIA 1VQMP 2KODA 2LOLA 3RG2A 1RNIA 2NO8A 2FQ0A 2GDYA 2JU1A 1Q7YQ 1K30A 1Q82Q 2L0QA 3CMAP 2EFJA 3CCUP 2GZGA 2MR7A 2VLNA 2KOPA 1AUMA 2GDWA 2L4BA 2L22A 2N6YA 3CCJP 2XT1A 3G21A 3I55P 2JO0A 3GKLC 2L9FA 3M1MA 2K92A 2M5RA 3GZMA 2KORA 1D1DA 1YI2P 1BXIA 2P9XA 4GR6A 2MY5A 2KG8A 4CA3A 5HGMA 4GR2A 2QNWA 1JJ2O 1VQPP 1M90Q 3I56P 4PH1A 3H0DA 1VQOP 2N98A 2OARA 1ZMBA 1UNKA 1IMQA 3DS4A 4NEOA 2LF4A 3CCVP 2FVAA 1YJWP 2L6EA 2M8PA 2XXMA 4XFZA 1Q81Q 2JYLA 3G6EP 1CEIA 1M6EX 2DGYA 2EHTA 2VLPA 3CCQP 3GZLA 4M0IA 1E6JP 4BPFA 2FACA 3Q20A 4MRTC 2VLOA 3DTJA 2XZ1C 3RG6C 1YJNP 3G0VA 2CWOA 3CXCO 2CGQA 2XV6A 2FADA 1KD1Q 1M6NA 5EW5E 2K2QA 4XROA 3U43A 2ONTA 3DPHA 2JU2A 1VQKP 3CPWO 1L0HA 3CE7A 5I4TG 1IUQA 2KWLA 1EIAA 2PEIA 2KGDA 1YHQP 1RO0A 1GXHA 3P05A 2M8NA 4R0MA 2X2BA 2E1MA 2FVFA 4U0BA 2LL8A 4XFYA 1ACPA 1EOQA 2JQ4A 5HGOA 5F2KA 5KP6B 1YJ9P 5JPAA 5HGNA 2Z46A 2FHSC 1BAJA 2PEKA 4U0EA 3NY7B 1X3OA 5BS1A 1UJZA 2KG6A 4H2YC 5HV8A 2K0DX 1YIJP 3GJNA 4UHPB 2LTEA 2N6ZA 3MGEA 3CCMP 1HY8A 3NTEA 2GDXA 2JGPA 3G26A 3DS0A 4BPHA 1QRJA 1RO2A 1KC8Q 2BUOA 2WPTA 1VQ4P 1L0IA 2GZEA 2PEQA 5EJDA 2LKIA 1K8AQ 3CCEP 2OTJP 2KOOA 2AVAA 3G4SP 2GZJA 2Z45A 4IZ6A 2CNRA 2LMLA 5CZDB 2EHSA 2KGCA 2QEXP 1OR5A 2FQ1A 5KP8B 1KLPA 2GYKA 2LIUA 2KR5A 5HGLA 1VQLP 2PEJA 2PENA 1Z6MA 1M74A 4WYMA 1IMPA 2LIWA 1T8KA 5DCKA 1DV5A 1VQ6P 1GXGA 1K9MQ 4H2XC 3WBHA 1QVGO 2K0YA 3H47A 2GZFA 3DS5A 1EMVA 4QKOA 1ZNVA 2DNWA 3B5IA 1S72P 2KOSA 4PWVB 4HKGA 2JBGA 3LMOA 5BS2A 2KGEA 4XRQA 2VLQA 1QVFO 3CMEP 3HZQA 2FQ2A 2MVUA 1VKUA 2MD9A 3G28A 2XZ0D 3CCLP 1N8RQ 1KQSO 3G29A 1VQNP 3LRYA 3EJDA 4H2WC 2K0XA 1VQ9P 2N50A 1A8OA 2MVVA 3E2DA 1M1KQ 3G1GA 4U0CA 1K73Q 2AF8A 2CQ8A 2EIAA 2K94A 1NJIQ 2ROQA 2PEOA
chains in the Genus database with same CATH topology
4IZ6A 2CNRA 2K2QA 5HVCA 2LMLA 2LOLA 5CZDB 2EHSA 3RG2A 4PXHB 2KGCA 1AF8A 2JU2A 2FQ0A 2GDYA 2JU1A 1OR5A 1L0HA 2FQ1A 2L0QA 5KP8B 1KLPA 3CE7A 2LIUA 2KR5A 2MR7A 2KW2A 2KWLA 2N5HA 2KGDA 2LIWA 2KOPA 1T8KA 2GDWA 2L4BA 2L22A 2N6YA 1DV5A 4R0MA 2X2BA 4H2XC 2L9FA 2FVEA 2FVFA 2K0YA 2LL8A 2K92A 2M5RA 3GZMA 1ACPA 2KORA 2JQ4A 2DNWA 5KP6B 2KOSA 2MY5A 4PWVB 2KG8A 3EJEA 4CA3A 4HKGA 2QNWA 2FAEA 2FHSC 1NQ4A 3LMOA 2KOQA 2AFDA 2KGEA 2N98A 2KG9A 2LPKA 3NY7B 4NEOA 1X3OA 2KGAA 1F80D 2FVAA 2FQ2A 2MVUA 1VKUA 2KG6A 2MD9A 4H2YC 2PNGA 2AFEA 3EJBA 5HV8A 4DG9A 2EHTA 2VSQA 2LTEA 2XZ0D 3GZLA 2MR8A 2N6ZA 4BPFA 1HY8A 2FACA 2GDXA 2JGPA 1HQBA 3EJDA 4H2WC 4MRTC 2N5IA 2K0XA 1DNYA 4BPHA 2N50A 4BPGA 2K93A 2CG5B 2MVVA 5KP7B 2XZ1C 1L0IA 5EJDA 2LKIA 2KOOA 2AVAA 2MF4A 2CGQA 2AF8A 2CQ8A 2K94A 2FADA 2ROQA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4IZ6 A;  2CNR A;  2K2Q A;  5HVC A;  2LML A;  2LOL A;  5CZD B;  2EHS A;  3RG2 A;  4PXH B;  2KGC A;  1AF8 A;  2JU2 A;  2FQ0 A;  2GDY A;  2JU1 A;  1OR5 A;  1L0H A;  2FQ1 A;  2L0Q A;  5KP8 B;  1KLP A;  3CE7 A;  2LIU A;  2KR5 A;  2MR7 A;  2KW2 A;  2KWL A;  2N5H A;  2KGD A;  2LIW A;  2KOP A;  1T8K A;  2GDW A;  2L4B A;  2L22 A;  2N6Y A;  1DV5 A;  4R0M A;  2X2B A;  4H2X C;  2L9F A;  2FVE A;  2FVF A;  2K0Y A;  2LL8 A;  2K92 A;  2M5R A;  3GZM A;  1ACP A;  2KOR A;  2JQ4 A;  2DNW A;  5KP6 B;  2KOS A;  2MY5 A;  4PWV B;  2KG8 A;  3EJE A;  4CA3 A;  4HKG A;  2QNW A;  2FAE A;  2FHS C;  1NQ4 A;  3LMO A;  2KOQ A;  2AFD A;  2KGE A;  2N98 A;  2KG9 A;  2LPK A;  3NY7 B;  4NEO A;  1X3O A;  2KGA A;  1F80 D;  2FVA A;  2FQ2 A;  2MVU A;  1VKU A;  2KG6 A;  2MD9 A;  4H2Y C;  2PNG A;  2AFE A;  3EJB A;  5HV8 A;  4DG9 A;  2EHT A;  2VSQ A;  2LTE A;  2XZ0 D;  3GZL A;  2MR8 A;  2N6Z A;  4BPF A;  1HY8 A;  2FAC A;  2GDX A;  2JGP A;  1HQB A;  3EJD A;  4H2W C;  4MRT C;  2N5I A;  2K0X A;  1DNY A;  4BPH A;  2N50 A;  4BPG A;  2K93 A;  2CG5 B;  2MVV A;  5KP7 B;  2XZ1 C;  1L0I A;  5EJD A;  2LKI A;  2KOO A;  2AVA A;  2MF4 A;  2CGQ A;  2AF8 A;  2CQ8 A;  2K94 A;  2FAD A;  2ROQ A; 
#chains in the Genus database with same CATH topology
 1W2B O;  4COP A;  5HVC A;  4COC A;  2PY8 A;  3B4Q A;  3VRL C;  3CC4 P;  4PXH B;  2PEM A;  1VQ8 P;  1AF8 A;  4IPY A;  1AYI A;  3DS1 A;  1MZ8 A;  1VHN A;  3CC7 P;  2KW2 A;  2N5H A;  2K5X A;  1A43 A;  4U0F A;  1E0H A;  1VQ7 P;  3H4E A;  1Q86 Q;  4F37 A;  2FVE A;  5F2O A;  3DS3 A;  2BHV A;  3G1I A;  2Z44 A;  2JAZ A;  2QA4 P;  4PH0 A;  3EJE A;  2FAE A;  2GZI A;  1FR2 A;  1NQ4 A;  2KOQ A;  3CD6 P;  2AFD A;  2KG9 A;  3DS2 A;  2JB0 A;  2LPK A;  2KGA A;  1F80 D;  3CC2 P;  2ERH A;  4U0D A;  3G71 P;  2PNG A;  2AFE A;  3EJB A;  4U0A A;  4DG9 A;  2JYG A;  2VSQ A;  2MR8 A;  5F2N A;  3CCS P;  1HQB A;  2N5I A;  1DNY A;  2M8L A;  1GPJ A;  4BPG A;  2K93 A;  2CG5 B;  3OW2 O;  5KP7 B;  4XFX A;  1YIT P;  3CCR P;  2OTL P;  2MF4 A;  2EG5 A;  1VQ5 P;  4QNB A;  3HYB A;  7CEI A;  1VQM P;  2KOD A;  2LOL A;  3RG2 A;  1RNI A;  2NO8 A;  2FQ0 A;  2GDY A;  2JU1 A;  1Q7Y Q;  1K30 A;  1Q82 Q;  2L0Q A;  3CMA P;  2EFJ A;  3CCU P;  2GZG A;  2MR7 A;  2VLN A;  2KOP A;  1AUM A;  2GDW A;  2L4B A;  2L22 A;  2N6Y A;  3CCJ P;  2XT1 A;  3G21 A;  3I55 P;  2JO0 A;  3GKL C;  2L9F A;  3M1M A;  2K92 A;  2M5R A;  3GZM A;  2KOR A;  1D1D A;  1YI2 P;  1BXI A;  2P9X A;  4GR6 A;  2MY5 A;  2KG8 A;  4CA3 A;  5HGM A;  4GR2 A;  2QNW A;  1JJ2 O;  1VQP P;  1M90 Q;  3I56 P;  4PH1 A;  3H0D A;  1VQO P;  2N98 A;  2OAR A;  1ZMB A;  1UNK A;  1IMQ A;  3DS4 A;  4NEO A;  2LF4 A;  3CCV P;  2FVA A;  1YJW P;  2L6E A;  2M8P A;  2XXM A;  4XFZ A;  1Q81 Q;  2JYL A;  3G6E P;  1CEI A;  1M6E X;  2DGY A;  2EHT A;  2VLP A;  3CCQ P;  3GZL A;  4M0I A;  1E6J P;  4BPF A;  2FAC A;  3Q20 A;  4MRT C;  2VLO A;  3DTJ A;  2XZ1 C;  3RG6 C;  1YJN P;  3G0V A;  2CWO A;  3CXC O;  2CGQ A;  2XV6 A;  2FAD A;  1KD1 Q;  1M6N A;  5EW5 E;  2K2Q A;  4XRO A;  3U43 A;  2ONT A;  3DPH A;  2JU2 A;  1VQK P;  3CPW O;  1L0H A;  3CE7 A;  5I4T G;  1IUQ A;  2KWL A;  1EIA A;  2PEI A;  2KGD A;  1YHQ P;  1RO0 A;  1GXH A;  3P05 A;  2M8N A;  4R0M A;  2X2B A;  2E1M A;  2FVF A;  4U0B A;  2LL8 A;  4XFY A;  1ACP A;  1EOQ A;  2JQ4 A;  5HGO A;  5F2K A;  5KP6 B;  1YJ9 P;  5JPA A;  5HGN A;  2Z46 A;  2FHS C;  1BAJ A;  2PEK A;  4U0E A;  3NY7 B;  1X3O A;  5BS1 A;  1UJZ A;  2KG6 A;  4H2Y C;  5HV8 A;  2K0D X;  1YIJ P;  3GJN A;  4UHP B;  2LTE A;  2N6Z A;  3MGE A;  3CCM P;  1HY8 A;  3NTE A;  2GDX A;  2JGP A;  3G26 A;  3DS0 A;  4BPH A;  1QRJ A;  1RO2 A;  1KC8 Q;  2BUO A;  2WPT A;  1VQ4 P;  1L0I A;  2GZE A;  2PEQ A;  5EJD A;  2LKI A;  1K8A Q;  3CCE P;  2OTJ P;  2KOO A;  2AVA A;  3G4S P;  2GZJ A;  2Z45 A;  4IZ6 A;  2CNR A;  2LML A;  5CZD B;  2EHS A;  2KGC A;  2QEX P;  1OR5 A;  2FQ1 A;  5KP8 B;  1KLP A;  2GYK A;  2LIU A;  2KR5 A;  5HGL A;  1VQL P;  2PEJ A;  2PEN A;  1Z6M A;  1M74 A;  4WYM A;  1IMP A;  2LIW A;  1T8K A;  5DCK A;  1DV5 A;  1VQ6 P;  1GXG A;  1K9M Q;  4H2X C;  3WBH A;  1QVG O;  2K0Y A;  3H47 A;  2GZF A;  3DS5 A;  1EMV A;  4QKO A;  1ZNV A;  2DNW A;  3B5I A;  1S72 P;  2KOS A;  4PWV B;  4HKG A;  2JBG A;  3LMO A;  5BS2 A;  2KGE A;  4XRQ A;  2VLQ A;  1QVF O;  3CME P;  3HZQ A;  2FQ2 A;  2MVU A;  1VKU A;  2MD9 A;  3G28 A;  2XZ0 D;  3CCL P;  1N8R Q;  1KQS O;  3G29 A;  1VQN P;  3LRY A;  3EJD A;  4H2W C;  2K0X A;  1VQ9 P;  2N50 A;  1A8O A;  2MVV A;  3E2D A;  1M1K Q;  3G1G A;  4U0C A;  1K73 Q;  2AF8 A;  2CQ8 A;  2EIA A;  2K94 A;  1NJI Q;  2ROQ A;  2PEO A; 
#chains in the Genus database with same CATH homology
 4IZ6 A;  2CNR A;  2K2Q A;  5HVC A;  2LML A;  2LOL A;  5CZD B;  2EHS A;  3RG2 A;  4PXH B;  2KGC A;  1AF8 A;  2JU2 A;  2FQ0 A;  2GDY A;  2JU1 A;  1OR5 A;  1L0H A;  2FQ1 A;  2L0Q A;  5KP8 B;  1KLP A;  3CE7 A;  2LIU A;  2KR5 A;  2MR7 A;  2KW2 A;  2KWL A;  2N5H A;  2KGD A;  2LIW A;  2KOP A;  1T8K A;  2GDW A;  2L4B A;  2L22 A;  2N6Y A;  1DV5 A;  4R0M A;  2X2B A;  4H2X C;  2L9F A;  2FVE A;  2FVF A;  2K0Y A;  2LL8 A;  2K92 A;  2M5R A;  3GZM A;  1ACP A;  2KOR A;  2JQ4 A;  2DNW A;  5KP6 B;  2KOS A;  2MY5 A;  4PWV B;  2KG8 A;  3EJE A;  4CA3 A;  4HKG A;  2QNW A;  2FAE A;  2FHS C;  1NQ4 A;  3LMO A;  2KOQ A;  2AFD A;  2KGE A;  2N98 A;  2KG9 A;  2LPK A;  3NY7 B;  4NEO A;  1X3O A;  2KGA A;  1F80 D;  2FVA A;  2FQ2 A;  2MVU A;  1VKU A;  2KG6 A;  2MD9 A;  4H2Y C;  2PNG A;  2AFE A;  3EJB A;  5HV8 A;  4DG9 A;  2EHT A;  2VSQ A;  2LTE A;  2XZ0 D;  3GZL A;  2MR8 A;  2N6Z A;  4BPF A;  1HY8 A;  2FAC A;  2GDX A;  2JGP A;  1HQB A;  3EJD A;  4H2W C;  4MRT C;  2N5I A;  2K0X A;  1DNY A;  4BPH A;  2N50 A;  4BPG A;  2K93 A;  2CG5 B;  2MVV A;  5KP7 B;  2XZ1 C;  1L0I A;  5EJD A;  2LKI A;  2KOO A;  2AVA A;  2MF4 A;  2CGQ A;  2AF8 A;  2CQ8 A;  2K94 A;  2FAD A;  2ROQ A; 
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