2Z44A

Crystal structure of selenomethionine-labeled orf134
Total Genus 41
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
41
sequence length
110
structure length
110
Chain Sequence
EFKKVAKETAITLQSYLTYQAVRLISQQLSETNPGQAIWLGEFSKRHPIQESDLYLEAMMLENKELVLRILTVRENLAEGVLEFLPEMVLSQIKQSNGNHRRSLLERLTQ
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Chaperone
source organism Synechococcus sp.
publication title Crystal Structure of ORF134
rcsb
molecule keywords ORF134
total genus 41
structure length 110
sequence length 110
ec nomenclature
pdb deposition date 2007-06-12

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02341 RcbX RbcX protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.210 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A 2z44A00
2PEIA 3RG6C 3Q20A 2PEQA 2Z46A 2Z45A 4GR6A 3HYBA 2PEJA 5BS1A 2PEOA 2Z44A 2PEKA 2PEMA 2PY8A 4GR2A 5BS2A 2PENA
chains in the Genus database with same CATH superfamily
2FVFA 3CC4P 4GR2A 2MF4A 2JQ4A 4MRTC 4H2XC 3CC7P 2JAZA 3RG6C 2GZEA 1L0HA 2QNWA 2LPKA 2K0DX 2M8LA 3HZQA 2L6EA 1HQBA 2LOLA 1RNIA 3CCUP 2FADA 2GYKA 2P9XA 1FR2A 1M6EX 2QA4P 4H2YC 2XZ0D 2Z44A 1OR5A 2N6ZA 5F2OA 4BPHA 2AF8A 1M1KQ 2N5HA 2KOOA 3GJNA 2FACA 4H2WC 2GZGA 3GKLC 3B4QA 2KODA 2M8PA 2CWOA 1S72P 2AFEA 3LMOA 2GZFA 1AUMA 3G29A 2ERHA 3CPWO 2JYLA 5HVCA 3G4SP 2XT1A 4QNBA 3CXCO 1MZ8A 3WBHA 5KP7B 2FVAA 2MY5A 4U0CA 3CCMP 4BPFA 4U0DA 3G6EP 3DPHA 4XFXA 2EHTA 2GDXA 2MR8A 3OW2O 2OARA 2K0YA 1IMQA 1VKUA 2KW2A 2KGEA 2K92A 2NO8A 2GZIA 3DS4A 3DS2A 2MD9A 3RG2A 3I56P 1QVFO 4PXHB 3CE7A 3NTEA 1DNYA 3CMAP 1IMPA 1CEIA 1VQLP 1YJWP 2E1MA 2AVAA 1YHQP 1DV5A 2EIAA 2X2BA 4IZ6A 2K94A 4PH0A 3G1GA 2EFJA 1K9MQ 4GR6A 3CD6P 1M90Q 4QKOA 2L0QA 2JGPA 1M6NA 1RO0A 2XV6A 3HYBA 5HGOA 4NEOA 2WPTA 2LIUA 1N8RQ 1X3OA 1BXIA 1VQ6P 1K30A 2CG5B 1QVGO 2N50A 2MR7A 3H47A 1JJ2O 1D1DA 3E2DA 1AYIA 2CQ8A 3P05A 1BAJA 4XFYA 7CEIA 3CCJP 2M8NA 3CCRP 1W2BO 2JU1A 5HV8A 5EJDA 4WYMA 3EJEA 2ONTA 1K8AQ 2KG8A 2N98A 2K2QA 1ACPA 1NQ4A 1Q7YQ 2AFDA 4UHPB 2JO0A 3DS1A 3EJBA 2FAEA 3U43A 2KOSA 2L4BA 4XFZA 1NJIQ 2EG5A 4IPYA 2KG9A 2LKIA 1IUQA 2FVEA 3CC2P 1VQ5P 2KOQA 4HKGA 2PY8A 2QEXP 4PH1A 1YI2P 2FQ2A 3Q20A 2JB0A 4BPGA 1VQ8P 3CCQP 2FHSC 1EMVA 3G28A 2KR5A 2JYGA 3I55P 2XXMA 2MVUA 2FQ0A 4PWVB 1EOQA 4U0AA 2PEMA 2OTJP 1GXGA 1VQNP 2EHSA 1YJNP 2GDWA 1QRJA 1Q82Q 3GZLA 5F2KA 3MGEA 5DCKA 1ZMBA 3H4EA 1Q86Q 1UJZA 2PNGA 3DS5A 4XRQA 4COCA 1K73Q 4U0FA 1A8OA 1UNKA 2DGYA 2KWLA 3CCVP 2GZJA 5HGLA 5EW5E 2N5IA 2Z45A 3G26A 2L9FA 1A43A 2LL8A 1KC8Q 4COPA 2XZ1C 3DTJA 1VQ9P 1Q81Q 2VLPA 2CGQA 3G21A 2JBGA 3EJDA 1F80D 2FQ1A 2PEOA 1E6JP 1HY8A 2KOPA 1VQ4P 4F37A 2CNRA 2LTEA 2M5RA 1KD1Q 5HGNA 2JU2A 2PENA 4U0BA 3DS0A 2LIWA 1YIJP 1L0IA 2KGAA 5HGMA 4XROA 1YITP 3B5IA 2KGDA 2VLQA 2L22A 2KORA 1EIAA 2KG6A 2N6YA 2K5XA 2MVVA 3VRLC 1GPJA 1VQMP 3G71P 1ZNVA 2LMLA 5KP6B 1VQ7P 5I4TG 2K0XA 1RO2A 3M1MA 2GDYA 5BS2A 5KP8B 4M0IA 2VLNA 2BUOA 2Z46A 1VHNA 2BHVA 3CMEP 3LRYA 1YJ9P 2ROQA 1AF8A 1VQOP 5BS1A 2VSQA 3CCSP 1KLPA 3CCEP 3CCLP 4CA3A 1M74A 1VQKP 1Z6MA 2K93A 2PEJA 3NY7B 3G0VA 1GXHA 4DG9A 3G1IA 4U0EA 1T8KA 5F2NA 5JPAA 3GZMA 4R0MA 1E0HA 2DNWA 5CZDB 2OTLP 1KQSO 3DS3A 2VLOA 3H0DA 2KGCA 2PEIA 2LF4A 2PEQA 1VQPP 2PEKA
chains in the Genus database with same CATH topology
4U0BA 3DS0A 3CC2P 1KD1Q 3CC4P 3NTEA 4GR2A 3CMAP 1VQ5P 1YIJP 5HGMA 1VQLP 4XROA 2PY8A 2QEXP 3B5IA 1YITP 3CC7P 1YJWP 4PH1A 1EIAA 2E1MA 3RG6C 1YI2P 3Q20A 1YHQP 1VQ8P 2EIAA 3CCQP 3VRLC 4PH0A 1VQMP 2M8LA 3HZQA 3G1GA 2L6EA 2EFJA 1K9MQ 3G28A 4GR6A 1RNIA 3CCUP 3CD6P 3G71P 2JYGA 2P9XA 1M90Q 3I55P 2XXMA 1VQ7P 1M6EX 1M6NA 5I4TG 2QA4P 1RO0A 2XV6A 1EOQA 1RO2A 3HYBA 4U0AA 5HGOA 3M1MA 2Z44A 5F2OA 2PEMA 5BS2A 4M0IA 2OTJP 1M1KQ 2BUOA 2Z46A 2BHVA 1VQNP 1N8RQ 1YJNP 3CMEP 3LRYA 1VQ6P 1QRJA 1K30A 1Q82Q 5F2KA 1QVGO 3MGEA 3H47A 1YJ9P 1JJ2O 1D1DA 3E2DA 3P05A 5DCKA 1VQOP 1ZMBA 5BS1A 3H4EA 1Q86Q 1BAJA 4XFYA 3DS5A 3CCSP 3CCJP 2KODA 2M8PA 3CCEP 3CCLP 2CWOA 4XRQA 1S72P 2M8NA 3CCRP 1W2BO 4COCA 1AUMA 1M74A 1K73Q 4U0FA 1A8OA 2DGYA 3G29A 3CPWO 2JYLA 3G4SP 1VQKP 2XT1A 4QNBA 3CCVP 5HGLA 3CXCO 2PEJA 4WYMA 3WBHA 2ONTA 2Z45A 3G0VA 3G26A 1K8AQ 4U0CA 3CCMP 3G1IA 4U0DA 3G6EP 1A43A 1KC8Q 4COPA 4U0EA 3DPHA 4XFXA 5F2NA 3DTJA 5JPAA 3OW2O 2OARA 1Q7YQ 1VQ9P 1Q81Q 3G21A 2JO0A 3DS1A 2OTLP 1KQSO 3DS3A 3DS4A 3DS2A 3H0DA 2PEOA 1E6JP 4XFZA 2PEIA 1NJIQ 2LF4A 1VQ4P 2EG5A 2PEQA 3I56P 1VQPP 4IPYA 1QVFO 2PEKA 1IUQA 5HGNA 2PENA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2PEI A;  3RG6 C;  3Q20 A;  2PEQ A;  2Z46 A;  2Z45 A;  4GR6 A;  3HYB A;  2PEJ A;  5BS1 A;  2PEO A;  2Z44 A;  2PEK A;  2PEM A;  2PY8 A;  4GR2 A;  5BS2 A;  2PEN A; 
#chains in the Genus database with same CATH topology
 2FVF A;  3CC4 P;  4GR2 A;  2MF4 A;  2JQ4 A;  4MRT C;  4H2X C;  3CC7 P;  2JAZ A;  3RG6 C;  2GZE A;  1L0H A;  2QNW A;  2LPK A;  2K0D X;  2M8L A;  3HZQ A;  2L6E A;  1HQB A;  2LOL A;  1RNI A;  3CCU P;  2FAD A;  2GYK A;  2P9X A;  1FR2 A;  1M6E X;  2QA4 P;  4H2Y C;  2XZ0 D;  2Z44 A;  1OR5 A;  2N6Z A;  5F2O A;  4BPH A;  2AF8 A;  1M1K Q;  2N5H A;  2KOO A;  3GJN A;  2FAC A;  4H2W C;  2GZG A;  3GKL C;  3B4Q A;  2KOD A;  2M8P A;  2CWO A;  1S72 P;  2AFE A;  3LMO A;  2GZF A;  1AUM A;  3G29 A;  2ERH A;  3CPW O;  2JYL A;  5HVC A;  3G4S P;  2XT1 A;  4QNB A;  3CXC O;  1MZ8 A;  3WBH A;  5KP7 B;  2FVA A;  2MY5 A;  4U0C A;  3CCM P;  4BPF A;  4U0D A;  3G6E P;  3DPH A;  4XFX A;  2EHT A;  2GDX A;  2MR8 A;  3OW2 O;  2OAR A;  2K0Y A;  1IMQ A;  1VKU A;  2KW2 A;  2KGE A;  2K92 A;  2NO8 A;  2GZI A;  3DS4 A;  3DS2 A;  2MD9 A;  3RG2 A;  3I56 P;  1QVF O;  4PXH B;  3CE7 A;  3NTE A;  1DNY A;  3CMA P;  1IMP A;  1CEI A;  1VQL P;  1YJW P;  2E1M A;  2AVA A;  1YHQ P;  1DV5 A;  2EIA A;  2X2B A;  4IZ6 A;  2K94 A;  4PH0 A;  3G1G A;  2EFJ A;  1K9M Q;  4GR6 A;  3CD6 P;  1M90 Q;  4QKO A;  2L0Q A;  2JGP A;  1M6N A;  1RO0 A;  2XV6 A;  3HYB A;  5HGO A;  4NEO A;  2WPT A;  2LIU A;  1N8R Q;  1X3O A;  1BXI A;  1VQ6 P;  1K30 A;  2CG5 B;  1QVG O;  2N50 A;  2MR7 A;  3H47 A;  1JJ2 O;  1D1D A;  3E2D A;  1AYI A;  2CQ8 A;  3P05 A;  1BAJ A;  4XFY A;  7CEI A;  3CCJ P;  2M8N A;  3CCR P;  1W2B O;  2JU1 A;  5HV8 A;  5EJD A;  4WYM A;  3EJE A;  2ONT A;  1K8A Q;  2KG8 A;  2N98 A;  2K2Q A;  1ACP A;  1NQ4 A;  1Q7Y Q;  2AFD A;  4UHP B;  2JO0 A;  3DS1 A;  3EJB A;  2FAE A;  3U43 A;  2KOS A;  2L4B A;  4XFZ A;  1NJI Q;  2EG5 A;  4IPY A;  2KG9 A;  2LKI A;  1IUQ A;  2FVE A;  3CC2 P;  1VQ5 P;  2KOQ A;  4HKG A;  2PY8 A;  2QEX P;  4PH1 A;  1YI2 P;  2FQ2 A;  3Q20 A;  2JB0 A;  4BPG A;  1VQ8 P;  3CCQ P;  2FHS C;  1EMV A;  3G28 A;  2KR5 A;  2JYG A;  3I55 P;  2XXM A;  2MVU A;  2FQ0 A;  4PWV B;  1EOQ A;  4U0A A;  2PEM A;  2OTJ P;  1GXG A;  1VQN P;  2EHS A;  1YJN P;  2GDW A;  1QRJ A;  1Q82 Q;  3GZL A;  5F2K A;  3MGE A;  5DCK A;  1ZMB A;  3H4E A;  1Q86 Q;  1UJZ A;  2PNG A;  3DS5 A;  4XRQ A;  4COC A;  1K73 Q;  4U0F A;  1A8O A;  1UNK A;  2DGY A;  2KWL A;  3CCV P;  2GZJ A;  5HGL A;  5EW5 E;  2N5I A;  2Z45 A;  3G26 A;  2L9F A;  1A43 A;  2LL8 A;  1KC8 Q;  4COP A;  2XZ1 C;  3DTJ A;  1VQ9 P;  1Q81 Q;  2VLP A;  2CGQ A;  3G21 A;  2JBG A;  3EJD A;  1F80 D;  2FQ1 A;  2PEO A;  1E6J P;  1HY8 A;  2KOP A;  1VQ4 P;  4F37 A;  2CNR A;  2LTE A;  2M5R A;  1KD1 Q;  5HGN A;  2JU2 A;  2PEN A;  4U0B A;  3DS0 A;  2LIW A;  1YIJ P;  1L0I A;  2KGA A;  5HGM A;  4XRO A;  1YIT P;  3B5I A;  2KGD A;  2VLQ A;  2L22 A;  2KOR A;  1EIA A;  2KG6 A;  2N6Y A;  2K5X A;  2MVV A;  3VRL C;  1GPJ A;  1VQM P;  3G71 P;  1ZNV A;  2LML A;  5KP6 B;  1VQ7 P;  5I4T G;  2K0X A;  1RO2 A;  3M1M A;  2GDY A;  5BS2 A;  5KP8 B;  4M0I A;  2VLN A;  2BUO A;  2Z46 A;  1VHN A;  2BHV A;  3CME P;  3LRY A;  1YJ9 P;  2ROQ A;  1AF8 A;  1VQO P;  5BS1 A;  2VSQ A;  3CCS P;  1KLP A;  3CCE P;  3CCL P;  4CA3 A;  1M74 A;  1VQK P;  1Z6M A;  2K93 A;  2PEJ A;  3NY7 B;  3G0V A;  1GXH A;  4DG9 A;  3G1I A;  4U0E A;  1T8K A;  5F2N A;  5JPA A;  3GZM A;  4R0M A;  1E0H A;  2DNW A;  5CZD B;  2OTL P;  1KQS O;  3DS3 A;  2VLO A;  3H0D A;  2KGC A;  2PEI A;  2LF4 A;  2PEQ A;  1VQP P;  2PEK A; 
#chains in the Genus database with same CATH homology
 4U0B A;  3DS0 A;  3CC2 P;  1KD1 Q;  3CC4 P;  3NTE A;  4GR2 A;  3CMA P;  1VQ5 P;  1YIJ P;  5HGM A;  1VQL P;  4XRO A;  2PY8 A;  2QEX P;  3B5I A;  1YIT P;  3CC7 P;  1YJW P;  4PH1 A;  1EIA A;  2E1M A;  3RG6 C;  1YI2 P;  3Q20 A;  1YHQ P;  1VQ8 P;  2EIA A;  3CCQ P;  3VRL C;  4PH0 A;  1VQM P;  2M8L A;  3HZQ A;  3G1G A;  2L6E A;  2EFJ A;  1K9M Q;  3G28 A;  4GR6 A;  1RNI A;  3CCU P;  3CD6 P;  3G71 P;  2JYG A;  2P9X A;  1M90 Q;  3I55 P;  2XXM A;  1VQ7 P;  1M6E X;  1M6N A;  5I4T G;  2QA4 P;  1RO0 A;  2XV6 A;  1EOQ A;  1RO2 A;  3HYB A;  4U0A A;  5HGO A;  3M1M A;  2Z44 A;  5F2O A;  2PEM A;  5BS2 A;  4M0I A;  2OTJ P;  1M1K Q;  2BUO A;  2Z46 A;  2BHV A;  1VQN P;  1N8R Q;  1YJN P;  3CME P;  3LRY A;  1VQ6 P;  1QRJ A;  1K30 A;  1Q82 Q;  5F2K A;  1QVG O;  3MGE A;  3H47 A;  1YJ9 P;  1JJ2 O;  1D1D A;  3E2D A;  3P05 A;  5DCK A;  1VQO P;  1ZMB A;  5BS1 A;  3H4E A;  1Q86 Q;  1BAJ A;  4XFY A;  3DS5 A;  3CCS P;  3CCJ P;  2KOD A;  2M8P A;  3CCE P;  3CCL P;  2CWO A;  4XRQ A;  1S72 P;  2M8N A;  3CCR P;  1W2B O;  4COC A;  1AUM A;  1M74 A;  1K73 Q;  4U0F A;  1A8O A;  2DGY A;  3G29 A;  3CPW O;  2JYL A;  3G4S P;  1VQK P;  2XT1 A;  4QNB A;  3CCV P;  5HGL A;  3CXC O;  2PEJ A;  4WYM A;  3WBH A;  2ONT A;  2Z45 A;  3G0V A;  3G26 A;  1K8A Q;  4U0C A;  3CCM P;  3G1I A;  4U0D A;  3G6E P;  1A43 A;  1KC8 Q;  4COP A;  4U0E A;  3DPH A;  4XFX A;  5F2N A;  3DTJ A;  5JPA A;  3OW2 O;  2OAR A;  1Q7Y Q;  1VQ9 P;  1Q81 Q;  3G21 A;  2JO0 A;  3DS1 A;  2OTL P;  1KQS O;  3DS3 A;  3DS4 A;  3DS2 A;  3H0D A;  2PEO A;  1E6J P;  4XFZ A;  2PEI A;  1NJI Q;  2LF4 A;  1VQ4 P;  2EG5 A;  2PEQ A;  3I56 P;  1VQP P;  4IPY A;  1QVF O;  2PEK A;  1IUQ A;  5HGN A;  2PEN A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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