5BS2A

Crystal structure of rbcx-iia from chlamydomonas reinhardtii in complex with rbcl c-terminal tail
Total Genus 45

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
45
sequence length
113
structure length
113
Chain Sequence
ASPERKAAVALRSLFTFVAARVVLEQLQGPGGPETTYNQQAYLDLMDFLGTPMKGDGGDEWMAAVMRKNHALALRLMEVREAYLDEFEWGKTMEMASRETREANTRLMRAAAM

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
AH1 (46-71)AH2 (79-93)TII1 (72-75)EMPTYTIV1 (71-74)O1 (95-97)3H1 (99-101)AH3 (102-111)Updating...
connected with : NaN
molecule tags Chaperone
source organism Chlamydomonas reinhardtii
publication title Structural Analysis of the Rubisco-Assembly Chaperone RbcX-II from Chlamydomonas reinhardtii.
pubmed doi rcsb
molecule keywords Ribulose bisphosphate carboxylase large chain,CrRbcX-IIa
total genus 45
structure length 113
sequence length 113
chains with identical sequence B
ec nomenclature ec 4.1.1.39: Ribulose-bisphosphate carboxylase.
pdb deposition date 2015-06-01
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.210 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A 5bs2A00
2PY8A 4GR2A 2PEJA 2Z46A 4GR6A 2PEKA 2PENA 3HYBA 2PEQA 2Z44A 3RG6C 3Q20A 5BS2A 5BS1A 2PEOA 2Z45A 2PEMA 2PEIA
chains in the Genus database with same CATH superfamily
2LOLA 2JAZA 1VQ4P 2ERHA 2GZEA 3EJEA 2L6EA 4PWVB 3DS2A 2KGAA 1GXHA 2EIAA 3U43A 1HQBA 2XXMA 4GR6A 2MD9A 2OTLP 1IMPA 2KOQA 3DPHA 2VLNA 1IUQA 1VQ5P 4XFXA 3I55P 2XZ0D 2ROQA 3I56P 3EJBA 1EIAA 2BHVA 4IPYA 1EOQA 2KW2A 5HGMA 4HKGA 4IZ6A 1L0IA 2FVAA 3P05A 1ZNVA 2KG9A 4MRTC 3NTEA 5HV8A 2GDXA 1UJZA 2FQ2A 2P9XA 4QKOA 2K5XA 4XFYA 2KGCA 2LTEA 5DCKA 2KWLA 1QVGO 5F2NA 4COCA 2MR8A 1M1KQ 5EJDA 2N5HA 2FADA 4U0CA 2GZFA 1D1DA 2PY8A 2K0XA 1E0HA 2KG6A 1BAJA 2CQ8A 1FR2A 4PXHB 2K92A 3H4EA 2OTJP 1KQSO 3CC2P 3EJDA 2JU2A 1MZ8A 3G1IA 2KG8A 2PEIA 3CCRP 3GZMA 2PEMA 3CCQP 5HGOA 3G28A 5BS1A 4PH0A 3WBHA 1M6NA 2LIWA 2VSQA 4H2YC 1DV5A 2KGDA 4CA3A 1RO0A 2VLPA 2GZGA 3G26A 2JB0A 3H0DA 4BPFA 3LRYA 2N50A 3CCVP 1VQ7P 1YI2P 3DS1A 1T8KA 1VHNA 1YIJP 3CXCO 2DNWA 2PENA 2JYLA 1KLPA 2XV6A 4M0IA 1W2BO 3RG2A 2AF8A 2QA4P 1VQ6P 2CGQA 2L0QA 2FVEA 3DS5A 7CEIA 2ONTA 1Z6MA 3CMEP 3HYBA 2CNRA 1YJ9P 2KOPA 1VQ8P 3H47A 1VQ9P 3OW2O 2K2QA 2BUOA 4F37A 3CD6P 3Q20A 1UNKA 2E1MA 3CCSP 2N98A 2PNGA 1Q82Q 1QVFO 4U0EA 1L0HA 3E2DA 2MVVA 4BPHA 3GKLC 1VKUA 4UHPB 2LIUA 2JBGA 3VRLC 2FVFA 5I4TG 2JQ4A 2OARA 2XZ1C 1VQOP 3CC4P 3CCMP 2MVUA 3G4SP 3CMAP 4H2XC 1ZMBA 1M74A 3RG6C 1YJWP 2Z46A 1DNYA 2JYGA 1GXGA 2NO8A 2M5RA 3DTJA 3LMOA 2LF4A 2JO0A 1X3OA 2EG5A 2MR7A 2M8PA 5HVCA 2KOSA 4QNBA 2KODA 3MGEA 1Q81Q 1AYIA 1YJNP 2LPKA 1GPJA 2K0YA 4BPGA 4DG9A 2PEQA 1YITP 3CC7P 2X2BA 1VQPP 2VLQA 1M90Q 2FQ0A 2LMLA 2KR5A 3G21A 2AFDA 1Q86Q 4U0FA 3G71P 3CPWO 1F80D 3NY7B 2EHSA 5CZDB 1A43A 4XROA 5F2KA 2CG5B 5F2OA 2AVAA 3GZLA 2Z44A 2VLOA 1ACPA 2Z45A 4COPA 3DS3A 2JGPA 1S72P 2AFEA 5HGNA 5JPAA 2KORA 1OR5A 2K94A 1IMQA 2CWOA 1KC8Q 1VQLP 2MY5A 2KGEA 3G29A 5EW5E 1VQMP 1K9MQ 3B4QA 2MF4A 2GZJA 1RO2A 5KP8B 2XT1A 2M8NA 1CEIA 1KD1Q 2L9FA 2GZIA 2K93A 4U0BA 3GJNA 1HY8A 1NJIQ 1NQ4A 1N8RQ 3G0VA 4WYMA 2N6ZA 4R0MA 4U0DA 3CCJP 2EHTA 2GDYA 2K0DX 3DS0A 3HZQA 2GYKA 4PH1A 1BXIA 1VQKP 2L4BA 2GDWA 4NEOA 4GR2A 2LL8A 1JJ2O 2PEJA 1E6JP 2KOOA 2FACA 1AF8A 3B5IA 2QNWA 2FHSC 1AUMA 5KP6B 3CCUP 1K8AQ 5HGLA 2L22A 3DS4A 1YHQP 1QRJA 4U0AA 2DGYA 3CE7A 4XFZA 2LKIA 1K30A 3CCEP 2FQ1A 1K73Q 2M8LA 3G1GA 3M1MA 2N6YA 1M6EX 4H2WC 2JU1A 1VQNP 2PEOA 4XRQA 2N5IA 3CCLP 5BS2A 5KP7B 1A8OA 2WPTA 3G6EP 2EFJA 2QEXP 2PEKA 1Q7YQ 2FAEA 1RNIA 1EMVA
chains in the Genus database with same CATH topology
1VQ4P 1RO2A 2PEIA 3CCRP 2XT1A 3VRLC 2M8NA 2L6EA 2PEMA 3CCQP 5HGOA 5I4TG 1KD1Q 3G28A 3DS2A 5BS1A 2OARA 4PH0A 4U0BA 3WBHA 1M6NA 2EIAA 1VQOP 3CC4P 3CCMP 3G4SP 3CMAP 1NJIQ 2XXMA 4GR6A 2OTLP 3DPHA 1N8RQ 1ZMBA 1RO0A 1M74A 3RG6C 1YJWP 2Z46A 3G0VA 1IUQA 4WYMA 1VQ5P 4XFXA 2JYGA 3G26A 4U0DA 3I55P 3CCJP 3DTJA 3I56P 3H0DA 3LRYA 1EIAA 2LF4A 2JO0A 3CCVP 1VQ7P 2EG5A 1YI2P 2BHVA 3DS1A 3DS0A 3HZQA 4IPYA 2M8PA 1EOQA 4PH1A 1YIJP 4QNBA 5HGMA 2KODA 1VQKP 3MGEA 3CXCO 1Q81Q 4GR2A 1YJNP 3P05A 2PENA 1JJ2O 2JYLA 2PEJA 2XV6A 3NTEA 2PEQA 1E6JP 1YITP 4M0IA 3B5IA 3CC7P 1VQPP 2P9XA 1M90Q 1AUMA 1W2BO 3CCUP 3G21A 1K8AQ 1Q86Q 4U0FA 5HGLA 3G71P 3CPWO 4XFYA 2QA4P 3DS4A 1YHQP 1VQ6P 5DCKA 1QRJA 1QVGO 4U0AA 2DGYA 3DS5A 5F2NA 2ONTA 4COCA 1A43A 4XFZA 4XROA 5F2KA 4U0CA 1M1KQ 1D1DA 3CMEP 3HYBA 1K30A 5F2OA 1YJ9P 3CCEP 2PY8A 1K73Q 1VQ8P 3H47A 2Z44A 1VQ9P 2M8LA 3G1GA 3OW2O 2Z45A 4COPA 1BAJA 3M1MA 3DS3A 2BUOA 1S72P 3CD6P 3Q20A 5HGNA 1M6EX 5JPAA 1VQNP 2PEOA 2E1MA 3CCSP 4XRQA 3H4EA 3CCLP 5BS2A 1Q82Q 2OTJP 1A8OA 1KQSO 2CWOA 3G6EP 1QVFO 4U0EA 1KC8Q 1VQLP 2EFJA 3CC2P 2QEXP 2PEKA 3E2DA 1Q7YQ 3G29A 1VQMP 1K9MQ 1RNIA 3G1IA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2PY8 A;  4GR2 A;  2PEJ A;  2Z46 A;  4GR6 A;  2PEK A;  2PEN A;  3HYB A;  2PEQ A;  2Z44 A;  3RG6 C;  3Q20 A;  5BS2 A;  5BS1 A;  2PEO A;  2Z45 A;  2PEM A;  2PEI A; 
#chains in the Genus database with same CATH topology
 2LOL A;  2JAZ A;  1VQ4 P;  2ERH A;  2GZE A;  3EJE A;  2L6E A;  4PWV B;  3DS2 A;  2KGA A;  1GXH A;  2EIA A;  3U43 A;  1HQB A;  2XXM A;  4GR6 A;  2MD9 A;  2OTL P;  1IMP A;  2KOQ A;  3DPH A;  2VLN A;  1IUQ A;  1VQ5 P;  4XFX A;  3I55 P;  2XZ0 D;  2ROQ A;  3I56 P;  3EJB A;  1EIA A;  2BHV A;  4IPY A;  1EOQ A;  2KW2 A;  5HGM A;  4HKG A;  4IZ6 A;  1L0I A;  2FVA A;  3P05 A;  1ZNV A;  2KG9 A;  4MRT C;  3NTE A;  5HV8 A;  2GDX A;  1UJZ A;  2FQ2 A;  2P9X A;  4QKO A;  2K5X A;  4XFY A;  2KGC A;  2LTE A;  5DCK A;  2KWL A;  1QVG O;  5F2N A;  4COC A;  2MR8 A;  1M1K Q;  5EJD A;  2N5H A;  2FAD A;  4U0C A;  2GZF A;  1D1D A;  2PY8 A;  2K0X A;  1E0H A;  2KG6 A;  1BAJ A;  2CQ8 A;  1FR2 A;  4PXH B;  2K92 A;  3H4E A;  2OTJ P;  1KQS O;  3CC2 P;  3EJD A;  2JU2 A;  1MZ8 A;  3G1I A;  2KG8 A;  2PEI A;  3CCR P;  3GZM A;  2PEM A;  3CCQ P;  5HGO A;  3G28 A;  5BS1 A;  4PH0 A;  3WBH A;  1M6N A;  2LIW A;  2VSQ A;  4H2Y C;  1DV5 A;  2KGD A;  4CA3 A;  1RO0 A;  2VLP A;  2GZG A;  3G26 A;  2JB0 A;  3H0D A;  4BPF A;  3LRY A;  2N50 A;  3CCV P;  1VQ7 P;  1YI2 P;  3DS1 A;  1T8K A;  1VHN A;  1YIJ P;  3CXC O;  2DNW A;  2PEN A;  2JYL A;  1KLP A;  2XV6 A;  4M0I A;  1W2B O;  3RG2 A;  2AF8 A;  2QA4 P;  1VQ6 P;  2CGQ A;  2L0Q A;  2FVE A;  3DS5 A;  7CEI A;  2ONT A;  1Z6M A;  3CME P;  3HYB A;  2CNR A;  1YJ9 P;  2KOP A;  1VQ8 P;  3H47 A;  1VQ9 P;  3OW2 O;  2K2Q A;  2BUO A;  4F37 A;  3CD6 P;  3Q20 A;  1UNK A;  2E1M A;  3CCS P;  2N98 A;  2PNG A;  1Q82 Q;  1QVF O;  4U0E A;  1L0H A;  3E2D A;  2MVV A;  4BPH A;  3GKL C;  1VKU A;  4UHP B;  2LIU A;  2JBG A;  3VRL C;  2FVF A;  5I4T G;  2JQ4 A;  2OAR A;  2XZ1 C;  1VQO P;  3CC4 P;  3CCM P;  2MVU A;  3G4S P;  3CMA P;  4H2X C;  1ZMB A;  1M74 A;  3RG6 C;  1YJW P;  2Z46 A;  1DNY A;  2JYG A;  1GXG A;  2NO8 A;  2M5R A;  3DTJ A;  3LMO A;  2LF4 A;  2JO0 A;  1X3O A;  2EG5 A;  2MR7 A;  2M8P A;  5HVC A;  2KOS A;  4QNB A;  2KOD A;  3MGE A;  1Q81 Q;  1AYI A;  1YJN P;  2LPK A;  1GPJ A;  2K0Y A;  4BPG A;  4DG9 A;  2PEQ A;  1YIT P;  3CC7 P;  2X2B A;  1VQP P;  2VLQ A;  1M90 Q;  2FQ0 A;  2LML A;  2KR5 A;  3G21 A;  2AFD A;  1Q86 Q;  4U0F A;  3G71 P;  3CPW O;  1F80 D;  3NY7 B;  2EHS A;  5CZD B;  1A43 A;  4XRO A;  5F2K A;  2CG5 B;  5F2O A;  2AVA A;  3GZL A;  2Z44 A;  2VLO A;  1ACP A;  2Z45 A;  4COP A;  3DS3 A;  2JGP A;  1S72 P;  2AFE A;  5HGN A;  5JPA A;  2KOR A;  1OR5 A;  2K94 A;  1IMQ A;  2CWO A;  1KC8 Q;  1VQL P;  2MY5 A;  2KGE A;  3G29 A;  5EW5 E;  1VQM P;  1K9M Q;  3B4Q A;  2MF4 A;  2GZJ A;  1RO2 A;  5KP8 B;  2XT1 A;  2M8N A;  1CEI A;  1KD1 Q;  2L9F A;  2GZI A;  2K93 A;  4U0B A;  3GJN A;  1HY8 A;  1NJI Q;  1NQ4 A;  1N8R Q;  3G0V A;  4WYM A;  2N6Z A;  4R0M A;  4U0D A;  3CCJ P;  2EHT A;  2GDY A;  2K0D X;  3DS0 A;  3HZQ A;  2GYK A;  4PH1 A;  1BXI A;  1VQK P;  2L4B A;  2GDW A;  4NEO A;  4GR2 A;  2LL8 A;  1JJ2 O;  2PEJ A;  1E6J P;  2KOO A;  2FAC A;  1AF8 A;  3B5I A;  2QNW A;  2FHS C;  1AUM A;  5KP6 B;  3CCU P;  1K8A Q;  5HGL A;  2L22 A;  3DS4 A;  1YHQ P;  1QRJ A;  4U0A A;  2DGY A;  3CE7 A;  4XFZ A;  2LKI A;  1K30 A;  3CCE P;  2FQ1 A;  1K73 Q;  2M8L A;  3G1G A;  3M1M A;  2N6Y A;  1M6E X;  4H2W C;  2JU1 A;  1VQN P;  2PEO A;  4XRQ A;  2N5I A;  3CCL P;  5BS2 A;  5KP7 B;  1A8O A;  2WPT A;  3G6E P;  2EFJ A;  2QEX P;  2PEK A;  1Q7Y Q;  2FAE A;  1RNI A;  1EMV A; 
#chains in the Genus database with same CATH homology
 1VQ4 P;  1RO2 A;  2PEI A;  3CCR P;  2XT1 A;  3VRL C;  2M8N A;  2L6E A;  2PEM A;  3CCQ P;  5HGO A;  5I4T G;  1KD1 Q;  3G28 A;  3DS2 A;  5BS1 A;  2OAR A;  4PH0 A;  4U0B A;  3WBH A;  1M6N A;  2EIA A;  1VQO P;  3CC4 P;  3CCM P;  3G4S P;  3CMA P;  1NJI Q;  2XXM A;  4GR6 A;  2OTL P;  3DPH A;  1N8R Q;  1ZMB A;  1RO0 A;  1M74 A;  3RG6 C;  1YJW P;  2Z46 A;  3G0V A;  1IUQ A;  4WYM A;  1VQ5 P;  4XFX A;  2JYG A;  3G26 A;  4U0D A;  3I55 P;  3CCJ P;  3DTJ A;  3I56 P;  3H0D A;  3LRY A;  1EIA A;  2LF4 A;  2JO0 A;  3CCV P;  1VQ7 P;  2EG5 A;  1YI2 P;  2BHV A;  3DS1 A;  3DS0 A;  3HZQ A;  4IPY A;  2M8P A;  1EOQ A;  4PH1 A;  1YIJ P;  4QNB A;  5HGM A;  2KOD A;  1VQK P;  3MGE A;  3CXC O;  1Q81 Q;  4GR2 A;  1YJN P;  3P05 A;  2PEN A;  1JJ2 O;  2JYL A;  2PEJ A;  2XV6 A;  3NTE A;  2PEQ A;  1E6J P;  1YIT P;  4M0I A;  3B5I A;  3CC7 P;  1VQP P;  2P9X A;  1M90 Q;  1AUM A;  1W2B O;  3CCU P;  3G21 A;  1K8A Q;  1Q86 Q;  4U0F A;  5HGL A;  3G71 P;  3CPW O;  4XFY A;  2QA4 P;  3DS4 A;  1YHQ P;  1VQ6 P;  5DCK A;  1QRJ A;  1QVG O;  4U0A A;  2DGY A;  3DS5 A;  5F2N A;  2ONT A;  4COC A;  1A43 A;  4XFZ A;  4XRO A;  5F2K A;  4U0C A;  1M1K Q;  1D1D A;  3CME P;  3HYB A;  1K30 A;  5F2O A;  1YJ9 P;  3CCE P;  2PY8 A;  1K73 Q;  1VQ8 P;  3H47 A;  2Z44 A;  1VQ9 P;  2M8L A;  3G1G A;  3OW2 O;  2Z45 A;  4COP A;  1BAJ A;  3M1M A;  3DS3 A;  2BUO A;  1S72 P;  3CD6 P;  3Q20 A;  5HGN A;  1M6E X;  5JPA A;  1VQN P;  2PEO A;  2E1M A;  3CCS P;  4XRQ A;  3H4E A;  3CCL P;  5BS2 A;  1Q82 Q;  2OTJ P;  1A8O A;  1KQS O;  2CWO A;  3G6E P;  1QVF O;  4U0E A;  1KC8 Q;  1VQL P;  2EFJ A;  3CC2 P;  2QEX P;  2PEK A;  3E2D A;  1Q7Y Q;  3G29 A;  1VQM P;  1K9M Q;  1RNI A;  3G1I A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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