5KP8B

Crystal structure of the curacin biosynthetic pathway hmg synthase in complex with acetyl donor-acp
Total Genus 26

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
26
sequence length
78
structure length
78
Chain Sequence
MSKEQVLKIIKKYTREIAPELEDSPLEPTDSLKKLGIDSVNRAEIIMMVMEDLSLNIPRIELAGAKNIGELADLFAAK

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
AH1 (3-17)AH3 (68-77)AH2 (39-53)3H1 (19-21)TI1 (21-24)EMPTYTI2 (27-30)3H3 (59-62)3H2 (32-34)Updating...
connected with : NaN
molecule tags Transferase
source organism Moorea producens 3l
publication title Anatomy of the beta-branching enzyme of polyketide biosynthesis and its interaction with an acyl-ACP substrate.
pubmed doi rcsb
molecule keywords CurD
total genus 26
structure length 78
sequence length 78
ec nomenclature
pdb deposition date 2016-07-02

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
B PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 5kp8B00
2K0XA 2CQ8A 4BPHA 2MVVA 1KLPA 4BPFA 2KGDA 2FQ2A 2GDXA 2KOSA 2KGEA 5HV8A 2N98A 2KOQA 1DV5A 2FQ0A 2KG9A 3EJBA 4BPGA 1OR5A 2KWLA 2N50A 2JU2A 1F80D 5KP8B 2KG8A 5HVCA 2N5IA 2AF8A 4HKGA 4H2XC 2L22A 4R0MA 3GZLA 2VSQA 2GDYA 5CZDB 2L0QA 2FVFA 5KP6B 2EHTA 5KP7B 1HQBA 2EHSA 2KR5A 2FQ1A 2MF4A 1L0IA 3GZMA 2KORA 2LTEA 2LKIA 2K92A 2JU1A 2MR7A 2M5RA 2CGQA 2MD9A 2LPKA 2X2BA 2L9FA 2FACA 2PNGA 2N6YA 1AF8A 2LL8A 1VKUA 2MVUA 1ACPA 2AVAA 3EJEA 2XZ1C 4NEOA 4MRTC 2GDWA 4PXHB 1X3OA 2K0YA 2AFEA 3LMOA 4H2YC 2AFDA 2FVEA 2K93A 2N6ZA 1DNYA 2DNWA 1L0HA 4DG9A 1T8KA 2FVAA 3EJDA 2KGAA 2JQ4A 2FAEA 4H2WC 2K2QA 2KW2A 2XZ0D 2QNWA 4CA3A 2L4BA 5EJDA 2CNRA 2LIUA 2LMLA 2MR8A 2ROQA 2MY5A 4IZ6A 4PWVB 2KOOA 2KGCA 1HY8A 2FADA 2LIWA 3CE7A 2K94A 2JGPA 2CG5B 1NQ4A 2KOPA 2LOLA 2N5HA 3NY7B 3RG2A 2KG6A 2FHSC
chains in the Genus database with same CATH superfamily
3G26A 2VLOA 3CCUP 1EMVA 2MVVA 4BPFA 1VQ7P 4M0IA 2GDXA 4IPYA 2KGEA 1VQ5P 3LRYA 1VQMP 2KWLA 1UJZA 5HGNA 1GXHA 1Z6MA 5HVCA 4QKOA 4U0BA 1KC8Q 2L22A 3DS0A 2VSQA 2KODA 2VLQA 2EG5A 1YITP 5KP7B 2EHSA 2VLNA 3WBHA 3CCJP 2KR5A 4XFYA 2JO0A 3GZMA 2K92A 2MR7A 5I4TG 2M5RA 2CGQA 1YJWP 4GR6A 2OTJP 5JPAA 2JYLA 2LL8A 3H4EA 1IMQA 4NEOA 1IMPA 3G29A 4H2YC 2M8PA 1YHQP 3VRLC 5HGLA 1Q81Q 1EOQA 2WPTA 3NTEA 4XFZA 2ERHA 1CEIA 1K30A 2FAEA 3B4QA 2L4BA 2NO8A 3Q20A 2LIUA 3CCEP 4PH0A 1VQKP 2KGCA 2FADA 3HZQA 1Q82Q 3CD6P 3CCVP 1A8OA 3DS2A 2PEKA 1QVFO 4BPHA 2PEQA 2FQ2A 2PEOA 3U43A 3DS5A 5HV8A 2N98A 3CCRP 2FQ0A 2KG9A 3DTJA 2XXMA 3G1IA 2JU2A 2ONTA 5KP8B 2KG8A 1VQPP 1K73Q 3G28A 4R0MA 5F2KA 2CWOA 1FR2A 2FVFA 3GJNA 1S72P 4UHPB 2MF4A 2KORA 2LTEA 2LKIA 1YI2P 2JU1A 2M8LA 1KQSO 3G1GA 3GKLC 2L9FA 2PNGA 2N6YA 1D1DA 3RG6C 2AVAA 2JYGA 2PEIA 4GR2A 1BXIA 2GDWA 4PXHB 1X3OA 3LMOA 3H47A 4F37A 2AFDA 1BAJA 2GYKA 2DNWA 2DGYA 3M1MA 3EJDA 3OW2O 1RO2A 3HYBA 2Z44A 2XZ0D 2QNWA 5F2OA 1ZNVA 1AUMA 1NJIQ 2CNRA 4U0FA 4XRQA 3H0DA 4IZ6A 4PWVB 2KOOA 3CCMP 2LIWA 2EFJA 2GZJA 1NQ4A 2LOLA 7CEIA 1RNIA 2K0XA 1Q7YQ 4WYMA 1KLPA 1YIJP 2L6EA 1VQNP 4U0AA 1E6JP 3DS4A 5HGOA 2N50A 3DS3A 4U0CA 1RO0A 2N5IA 1M90Q 2BHVA 3GZLA 3G21A 5CZDB 5KP6B 1MZ8A 3G71P 2LF4A 2FQ1A 1L0IA 2E1MA 1VQOP 2LPKA 5EW5E 2Z45A 1QVGO 2MVUA 1VQ9P 2EIAA 1KD1Q 3CCLP 2P9XA 1UNKA 2GZFA 2K0YA 2AFEA 2K93A 1GXGA 1Q86Q 2N6ZA 3DS1A 4U0EA 1DNYA 4DG9A 1T8KA 1YJNP 2PEMA 2QEXP 2KGAA 2JQ4A 2Z46A 2PY8A 4H2WC 1VQ6P 2K2QA 3CC4P 2KW2A 3B5IA 3CMAP 3DPHA 1M74A 1IUQA 1W2BO 1A43A 2MR8A 2K5XA 1M6EX 2ROQA 4COCA 4XROA 1VQ8P 1HY8A 4U0DA 1K9MQ 2KOPA 1N8RQ 1ZMBA 3NY7B 3RG2A 2KG6A 2FHSC 3CMEP 2CQ8A 2QA4P 3CC2P 2KGDA 2K0DX 2KOSA 3G4SP 1E0HA 2KOQA 1DV5A 3I56P 3EJBA 4BPGA 1OR5A 4XFXA 1F80D 2XV6A 5F2NA 2AF8A 4HKGA 2BUOA 3G0VA 4H2XC 1M1KQ 3CC7P 2JB0A 2OTLP 2GDYA 1EIAA 2JAZA 2L0QA 1QRJA 2EHTA 1HQBA 2OARA 1VHNA 3E2DA 2JBGA 2GZEA 1AYIA 4PH1A 2MD9A 2PEJA 3CCSP 2X2BA 2FACA 1AF8A 1VKUA 2PENA 4COPA 1ACPA 3CXCO 3EJEA 3G6EP 1K8AQ 2XZ1C 3MGEA 4MRTC 3CPWO 1M6NA 2VLPA 2XT1A 5DCKA 2FVEA 5BS2A 1L0HA 3I55P 1YJ9P 2FVAA 3P05A 5BS1A 1GPJA 1VQ4P 2M8NA 4CA3A 2GZGA 2GZIA 5HGMA 5EJDA 2LMLA 2MY5A 1VQLP 3CCQP 3CE7A 2K94A 4QNBA 2JGPA 2CG5B 1JJ2O 2N5HA
chains in the Genus database with same CATH topology
2K0XA 2CQ8A 4BPHA 2MVVA 1KLPA 4BPFA 2KGDA 2FQ2A 2GDXA 2KOSA 2KGEA 5HV8A 2N98A 2KOQA 1DV5A 2FQ0A 2KG9A 3EJBA 4BPGA 1OR5A 2KWLA 2N50A 2JU2A 1F80D 5KP8B 2KG8A 5HVCA 2N5IA 2AF8A 4HKGA 4H2XC 2L22A 4R0MA 3GZLA 2VSQA 2GDYA 5CZDB 2L0QA 2FVFA 5KP6B 2EHTA 5KP7B 1HQBA 2EHSA 2KR5A 2FQ1A 2MF4A 1L0IA 3GZMA 2KORA 2LTEA 2LKIA 2K92A 2JU1A 2MR7A 2M5RA 2CGQA 2MD9A 2LPKA 2X2BA 2L9FA 2FACA 2PNGA 2N6YA 1AF8A 2LL8A 1VKUA 2MVUA 1ACPA 2AVAA 3EJEA 2XZ1C 4NEOA 4MRTC 2GDWA 4PXHB 1X3OA 2K0YA 2AFEA 3LMOA 4H2YC 2AFDA 2FVEA 2K93A 2N6ZA 1DNYA 2DNWA 1L0HA 4DG9A 1T8KA 2FVAA 3EJDA 2KGAA 2JQ4A 2FAEA 4H2WC 2K2QA 2KW2A 2XZ0D 2QNWA 4CA3A 2L4BA 5EJDA 2CNRA 2LIUA 2LMLA 2MR8A 2ROQA 2MY5A 4IZ6A 4PWVB 2KOOA 2KGCA 1HY8A 2FADA 2LIWA 3CE7A 2K94A 2JGPA 2CG5B 1NQ4A 2KOPA 2LOLA 2N5HA 3NY7B 3RG2A 2KG6A 2FHSC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2K0X A;  2CQ8 A;  4BPH A;  2MVV A;  1KLP A;  4BPF A;  2KGD A;  2FQ2 A;  2GDX A;  2KOS A;  2KGE A;  5HV8 A;  2N98 A;  2KOQ A;  1DV5 A;  2FQ0 A;  2KG9 A;  3EJB A;  4BPG A;  1OR5 A;  2KWL A;  2N50 A;  2JU2 A;  1F80 D;  5KP8 B;  2KG8 A;  5HVC A;  2N5I A;  2AF8 A;  4HKG A;  4H2X C;  2L22 A;  4R0M A;  3GZL A;  2VSQ A;  2GDY A;  5CZD B;  2L0Q A;  2FVF A;  5KP6 B;  2EHT A;  5KP7 B;  1HQB A;  2EHS A;  2KR5 A;  2FQ1 A;  2MF4 A;  1L0I A;  3GZM A;  2KOR A;  2LTE A;  2LKI A;  2K92 A;  2JU1 A;  2MR7 A;  2M5R A;  2CGQ A;  2MD9 A;  2LPK A;  2X2B A;  2L9F A;  2FAC A;  2PNG A;  2N6Y A;  1AF8 A;  2LL8 A;  1VKU A;  2MVU A;  1ACP A;  2AVA A;  3EJE A;  2XZ1 C;  4NEO A;  4MRT C;  2GDW A;  4PXH B;  1X3O A;  2K0Y A;  2AFE A;  3LMO A;  4H2Y C;  2AFD A;  2FVE A;  2K93 A;  2N6Z A;  1DNY A;  2DNW A;  1L0H A;  4DG9 A;  1T8K A;  2FVA A;  3EJD A;  2KGA A;  2JQ4 A;  2FAE A;  4H2W C;  2K2Q A;  2KW2 A;  2XZ0 D;  2QNW A;  4CA3 A;  2L4B A;  5EJD A;  2CNR A;  2LIU A;  2LML A;  2MR8 A;  2ROQ A;  2MY5 A;  4IZ6 A;  4PWV B;  2KOO A;  2KGC A;  1HY8 A;  2FAD A;  2LIW A;  3CE7 A;  2K94 A;  2JGP A;  2CG5 B;  1NQ4 A;  2KOP A;  2LOL A;  2N5H A;  3NY7 B;  3RG2 A;  2KG6 A;  2FHS C; 
#chains in the Genus database with same CATH topology
 3G26 A;  2VLO A;  3CCU P;  1EMV A;  2MVV A;  4BPF A;  1VQ7 P;  4M0I A;  2GDX A;  4IPY A;  2KGE A;  1VQ5 P;  3LRY A;  1VQM P;  2KWL A;  1UJZ A;  5HGN A;  1GXH A;  1Z6M A;  5HVC A;  4QKO A;  4U0B A;  1KC8 Q;  2L22 A;  3DS0 A;  2VSQ A;  2KOD A;  2VLQ A;  2EG5 A;  1YIT P;  5KP7 B;  2EHS A;  2VLN A;  3WBH A;  3CCJ P;  2KR5 A;  4XFY A;  2JO0 A;  3GZM A;  2K92 A;  2MR7 A;  5I4T G;  2M5R A;  2CGQ A;  1YJW P;  4GR6 A;  2OTJ P;  5JPA A;  2JYL A;  2LL8 A;  3H4E A;  1IMQ A;  4NEO A;  1IMP A;  3G29 A;  4H2Y C;  2M8P A;  1YHQ P;  3VRL C;  5HGL A;  1Q81 Q;  1EOQ A;  2WPT A;  3NTE A;  4XFZ A;  2ERH A;  1CEI A;  1K30 A;  2FAE A;  3B4Q A;  2L4B A;  2NO8 A;  3Q20 A;  2LIU A;  3CCE P;  4PH0 A;  1VQK P;  2KGC A;  2FAD A;  3HZQ A;  1Q82 Q;  3CD6 P;  3CCV P;  1A8O A;  3DS2 A;  2PEK A;  1QVF O;  4BPH A;  2PEQ A;  2FQ2 A;  2PEO A;  3U43 A;  3DS5 A;  5HV8 A;  2N98 A;  3CCR P;  2FQ0 A;  2KG9 A;  3DTJ A;  2XXM A;  3G1I A;  2JU2 A;  2ONT A;  5KP8 B;  2KG8 A;  1VQP P;  1K73 Q;  3G28 A;  4R0M A;  5F2K A;  2CWO A;  1FR2 A;  2FVF A;  3GJN A;  1S72 P;  4UHP B;  2MF4 A;  2KOR A;  2LTE A;  2LKI A;  1YI2 P;  2JU1 A;  2M8L A;  1KQS O;  3G1G A;  3GKL C;  2L9F A;  2PNG A;  2N6Y A;  1D1D A;  3RG6 C;  2AVA A;  2JYG A;  2PEI A;  4GR2 A;  1BXI A;  2GDW A;  4PXH B;  1X3O A;  3LMO A;  3H47 A;  4F37 A;  2AFD A;  1BAJ A;  2GYK A;  2DNW A;  2DGY A;  3M1M A;  3EJD A;  3OW2 O;  1RO2 A;  3HYB A;  2Z44 A;  2XZ0 D;  2QNW A;  5F2O A;  1ZNV A;  1AUM A;  1NJI Q;  2CNR A;  4U0F A;  4XRQ A;  3H0D A;  4IZ6 A;  4PWV B;  2KOO A;  3CCM P;  2LIW A;  2EFJ A;  2GZJ A;  1NQ4 A;  2LOL A;  7CEI A;  1RNI A;  2K0X A;  1Q7Y Q;  4WYM A;  1KLP A;  1YIJ P;  2L6E A;  1VQN P;  4U0A A;  1E6J P;  3DS4 A;  5HGO A;  2N50 A;  3DS3 A;  4U0C A;  1RO0 A;  2N5I A;  1M90 Q;  2BHV A;  3GZL A;  3G21 A;  5CZD B;  5KP6 B;  1MZ8 A;  3G71 P;  2LF4 A;  2FQ1 A;  1L0I A;  2E1M A;  1VQO P;  2LPK A;  5EW5 E;  2Z45 A;  1QVG O;  2MVU A;  1VQ9 P;  2EIA A;  1KD1 Q;  3CCL P;  2P9X A;  1UNK A;  2GZF A;  2K0Y A;  2AFE A;  2K93 A;  1GXG A;  1Q86 Q;  2N6Z A;  3DS1 A;  4U0E A;  1DNY A;  4DG9 A;  1T8K A;  1YJN P;  2PEM A;  2QEX P;  2KGA A;  2JQ4 A;  2Z46 A;  2PY8 A;  4H2W C;  1VQ6 P;  2K2Q A;  3CC4 P;  2KW2 A;  3B5I A;  3CMA P;  3DPH A;  1M74 A;  1IUQ A;  1W2B O;  1A43 A;  2MR8 A;  2K5X A;  1M6E X;  2ROQ A;  4COC A;  4XRO A;  1VQ8 P;  1HY8 A;  4U0D A;  1K9M Q;  2KOP A;  1N8R Q;  1ZMB A;  3NY7 B;  3RG2 A;  2KG6 A;  2FHS C;  3CME P;  2CQ8 A;  2QA4 P;  3CC2 P;  2KGD A;  2K0D X;  2KOS A;  3G4S P;  1E0H A;  2KOQ A;  1DV5 A;  3I56 P;  3EJB A;  4BPG A;  1OR5 A;  4XFX A;  1F80 D;  2XV6 A;  5F2N A;  2AF8 A;  4HKG A;  2BUO A;  3G0V A;  4H2X C;  1M1K Q;  3CC7 P;  2JB0 A;  2OTL P;  2GDY A;  1EIA A;  2JAZ A;  2L0Q A;  1QRJ A;  2EHT A;  1HQB A;  2OAR A;  1VHN A;  3E2D A;  2JBG A;  2GZE A;  1AYI A;  4PH1 A;  2MD9 A;  2PEJ A;  3CCS P;  2X2B A;  2FAC A;  1AF8 A;  1VKU A;  2PEN A;  4COP A;  1ACP A;  3CXC O;  3EJE A;  3G6E P;  1K8A Q;  2XZ1 C;  3MGE A;  4MRT C;  3CPW O;  1M6N A;  2VLP A;  2XT1 A;  5DCK A;  2FVE A;  5BS2 A;  1L0H A;  3I55 P;  1YJ9 P;  2FVA A;  3P05 A;  5BS1 A;  1GPJ A;  1VQ4 P;  2M8N A;  4CA3 A;  2GZG A;  2GZI A;  5HGM A;  5EJD A;  2LML A;  2MY5 A;  1VQL P;  3CCQ P;  3CE7 A;  2K94 A;  4QNB A;  2JGP A;  2CG5 B;  1JJ2 O;  2N5H A; 
#chains in the Genus database with same CATH homology
 2K0X A;  2CQ8 A;  4BPH A;  2MVV A;  1KLP A;  4BPF A;  2KGD A;  2FQ2 A;  2GDX A;  2KOS A;  2KGE A;  5HV8 A;  2N98 A;  2KOQ A;  1DV5 A;  2FQ0 A;  2KG9 A;  3EJB A;  4BPG A;  1OR5 A;  2KWL A;  2N50 A;  2JU2 A;  1F80 D;  5KP8 B;  2KG8 A;  5HVC A;  2N5I A;  2AF8 A;  4HKG A;  4H2X C;  2L22 A;  4R0M A;  3GZL A;  2VSQ A;  2GDY A;  5CZD B;  2L0Q A;  2FVF A;  5KP6 B;  2EHT A;  5KP7 B;  1HQB A;  2EHS A;  2KR5 A;  2FQ1 A;  2MF4 A;  1L0I A;  3GZM A;  2KOR A;  2LTE A;  2LKI A;  2K92 A;  2JU1 A;  2MR7 A;  2M5R A;  2CGQ A;  2MD9 A;  2LPK A;  2X2B A;  2L9F A;  2FAC A;  2PNG A;  2N6Y A;  1AF8 A;  2LL8 A;  1VKU A;  2MVU A;  1ACP A;  2AVA A;  3EJE A;  2XZ1 C;  4NEO A;  4MRT C;  2GDW A;  4PXH B;  1X3O A;  2K0Y A;  2AFE A;  3LMO A;  4H2Y C;  2AFD A;  2FVE A;  2K93 A;  2N6Z A;  1DNY A;  2DNW A;  1L0H A;  4DG9 A;  1T8K A;  2FVA A;  3EJD A;  2KGA A;  2JQ4 A;  2FAE A;  4H2W C;  2K2Q A;  2KW2 A;  2XZ0 D;  2QNW A;  4CA3 A;  2L4B A;  5EJD A;  2CNR A;  2LIU A;  2LML A;  2MR8 A;  2ROQ A;  2MY5 A;  4IZ6 A;  4PWV B;  2KOO A;  2KGC A;  1HY8 A;  2FAD A;  2LIW A;  3CE7 A;  2K94 A;  2JGP A;  2CG5 B;  1NQ4 A;  2KOP A;  2LOL A;  2N5H A;  3NY7 B;  3RG2 A;  2KG6 A;  2FHS C; 
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