1DCHA

Crystal structure of dcoh, a bifunctional, protein-binding transcription coactivator
Total Genus 31
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
31
sequence length
99
structure length
99
Chain Sequence
HRLSAEERDQLLPNLRAVGWNELEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSMT
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transcriptional stimulator,dimerization
molecule keywords DCOH (DIMERIZATION COFACTOR OF HNF-1)
publication title Crystal structure of DCoH, a bifunctional, protein-binding transcriptional coactivator.
pubmed rcsb
source organism Rattus norvegicus
total genus 31
structure length 99
sequence length 99
chains with identical sequence B, C, D, E, F, G, H
ec nomenclature ec 4.2.1.96: 4a-hydroxytetrahydrobiopterin dehydratase.
pdb deposition date 1995-01-24

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01329 Pterin_4a Pterin 4 alpha carbinolamine dehydratase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.1360.20 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 Transcriptional coactivator/pterin dehydratase 1dchA00
2EBBA 2V6SA 3JSTA 1F93A 4WILA 1RU0A 3HXAA 1USOA 2V6UA 4C45A 1USMA 2V6TA 1DCPA 1DCOA 4LOWA 1DCHA
chains in the Genus database with same CATH superfamily
1WORA 4BBRC 5C44K 3QX3A 4KMAA 4FZBA 4BLBA 4G0VA 2R92C 2E2HK 3GTMK 4A3EK 4A3KK 1BJTA 3N0BA 4GFQA 4O2DA 5C44C 4C45A 2E2HC 1WOSA 2RH6A 5IYBK 5CHPA 3VA7A 1IL2A 3EQLA 3GTMC 4A3EC 4A3KC 4LJZA 4GTDA 2BE5A 1TWCA 1I50K 1ZVUA 2PMZD 2CW0A 1PJ6A 3S14K 1XZQB 1HI9A 4A3MK 5IYBC 1O2FB 1TWGK 4LK0A 3LAJA 3S2HK 4WILA 1DD5A 4BXXK 5TMCA 3T01A 1TWAC 3HOZK 5IYDK 3H3VD 1I50C 4LLGA 1F7UA 3GEHA 4BY1C 3S14C 1IE0A 3GTGA 3I4MK 4A3MC 4P5AA 1TWGC 2JA7K 4GTBA 3S2HC 3N3YA 1BGWA 2E2HA 1B4AA 3GTJA 3BP3A 1O2BA 4BXXC 2V6TA 3ERED 3GTKA 3GTMA 3HOZC 5IYDC 5FJ8K 1G51A 4MEXA 1YX2A 2GSOA 3I4MC 1IBAA 1EH1A 4G0WA 2JA7C 2VUMK 3G4AA 2JA8K 1TWFK 2B63K 4A3CK 1WSRA 5IOSA 1IW7A 1I6VA 4BLAA 3BUEA 4A3JK 2R93K 3IPJA 1USMA 3GEEA 5JVOA 1I50A 2YU9K 4Y52K 3S15K 3S0XA 1Y1WA 3HXAA 5CJ9A 5HL8A 2JA8C 1TWFC 2B63C 4A3CC 1TWGA 2XCQA 3GSIA 4A3JC 2NVXK 3GTLK 3L4KA 4G7HA 2YU9C 4Y52C 2WB1L 2R7ZC 3TTGA 1J6WA 4OIPA 3GDZA 5EGEA 3GTQK 4Q5SA 2PPBA 1HQMA 2E2JK 3A8KA 4C3IK 3V4GA 3S17K 4X6AK 2NVXC 3GTLC 4NOIA 4JK1A 1SMYA 3HOVK 4OIQA 1RU0A 1K83K 3GTQC 3GTPA 4KATA 2VUMA 2E2JC 2FQOA 4C3IC 1R9TK 3S17C 4X6AC 5D4DA 3HOXK 3S2DK 2B63A 2PA8L 2V6UA 2JA5K 1WQFA 1JOEA 3M3YK 3HOVC 2R93A 5M5YK 3AD8C 1K83C 1VJEA 2GSUA 4ZH4A 1SFOK 1XPPA 1R9TC 1F7VA 3HOXC 3S2DC 2A6HA 4KM8A 2V6SA 2JA5C 1TWAK 1YCLA 3ADAC 3M3YC 4AYBL 3OPFA 4GTLA 3GTLA 1O28A 2GAHC 4KB4A 5FLMK 4BY1K 4GZYA 1XXAA 2A6EA 5C4JK 4A3LK 3K7AK 3PO3K 1SFOC 1I3QK 1EI6A 4YG2A 3AD9C 1C0AA 1ISEA 1WCMK 3FKIK 3FOFA 3GTQA 2R92A 4FM9A 3RZOK 1XXBA 2WB1D 3GEIA 1IQ0A 2NVYK 1PJ7A 1YNJA 5FLMC 1O29A 4A3FK 5C4JC 3HOYK 4A3LC 3K7AC 3PO3C 1WSVA 1I3QC 4XLPA 1BS2A 4OINA 4KN4A 3FKIC 1WCMC 2CFAA 2W7VA 3T00A 2O5IA 3RZOC 3N0CA 1R9TA 3CQZK 4G7ZA 3M4OK 2NVYC 3I4NK 3SZYA 2JA5A 4XSZA 4A3FC 3HOYC 1USOA 4MEYA 4KC6A 1KQ4A 2PA8D 4KAWX 5M3MK 4GTFA 1Y1VK 3S1RK 2Y3PA 1SFOA 1WOOA 3CQZC 5M5WK 2NVTK 3S1MK 2KWAA 2JA6K 3M4OC 1X31C 3I4NC 1TWAA 4KN7A 1WOPA 1O25A 1O26A 1WIHA 2XCRB 3TFJA 1XZPA 4A93K 2R7ZK 4GTEA 4G0UA 2XCOA 1Y1VC 5IYCC 3S1RC 3S1QK 5L46A 1O2AA 1I3QA 4AYBD 3S1MC 2NVTC 1VRQC 2PHCB 3FKIA 1WCMA 2JA6C 3WODA 2NVYA 4A93C 1AB4A 5M3FK 2CFAB 4XLNA 3S1QC 3JSTA 2JA7A 3SZZA 4QJVB 1UV7A 4KM9A 1J6VA 3CQZA 1TWCK 2GSNA 5C3EK 1TWHK 4GTCA 4A3BK 4C2MK 1ZYRA 3AH5A 2E2IK 5IP7K 4YFKA 2A69A 4J3NA 2ZFZA 1TWFA 1Y1VA 4C3HC 1BDFA 1TWCC 5IOTA 5C3EC 1TWHC 2JA6A 5C4XK 1IS1A 4A3BC 1O24A 1XZPB 1EQRA 1VLOA 4C2MC 3GTGK 1DCHA 3H0GK 2E2IC 2YU9A 2Y0SL 3PO2K 5IP7C 1J6XA 2R7ZA 4WJ3M 3GTJK 3GTKK 4RMFA 5C4XC 2NVXA 1I6HC 5M5XK 3MMLB 3G4CA 3GTGC 1J98A 3H0GC 1V5VA 2FQTA 5IOQA 3PO2C 2P5MA 5EGHA 2JH3A 3GTJC 1WQGA 4YFNA 3GTKC 1WQHA 4A3IK 4Y7NK 3GTOK 4GTAA 4KMHA 1XXCA 4KMDA 1TWHA 1Y1WK 4G7OA 2EBBA 4KASA 3TFIA 3A8JA 2ZUEA 4A3DK 3HKZL 5TMFA 2E2IA 4DDQA 1K83A 3Q3QA 3LAPA 5JFEA 3BP8C 4A3IC 4OIOA 4QJVA 4Y7NC 3S16K 3GTOC 4KB2A 1DCPA 4LR2A 1O27A 4A3GK 3S1NK 3T02A 4BKWA 1EK8A 4PAAA 1Y1WC 1JVIA 4QIWL 4BBSK 4A3DC 3H0GA 2WAQL 4Q4ZA 1INNA 3RZDK 5IYCK 4LOWA 2D6FC 4C3JK 1ZXOA 3GIRA 3S16C 4GT9A 3AQPA 4A3GC 3S1NC 2Y0SD 3CAGA 4AH6A 4KARA 3AQOA 4LQYA 4BBSC 4WJ4A 4ILDA 2GAGC 4MQ9A 3GTPK 3RZDC 1F9NA 4LK1A 3HOWK 4M1XA 3FOEA 2O5JA 4C3JC 4KMUA 4P5BA 1B4BA 2NVQK 3GTOA 3HOUK 3DXJA 4BY7K 1ZQ1C 3GTPC 5E68A 2VUMC 3HOWC 1YNNA 1JQWA 3TFHA 1VH2A 2RGRA 1GE9A 1L0WA 2PMZL 5IP9K 1VGXA 5TJ3A 4C3HK 2ZUFA 3A8IA 4XCHA 2NVQC 3AD7C 3HOUC 3FHZA 1DCOA 2R93C 3NUHA 4BY7C 5IORA 3HKZD 4P9SA 3OREA 3LPXA 4YFXA 4BBRK 3S15C 1ZBSA 4PABA 2P8TA 1PJ5A 3H3VL 5IP9C 4XSXA 2R92K 1XZQA 4OIRA 3L4JA 2A68A 1EFWA 1F93A 3OEPA 4QIWD 1I6HK 2WAQD 4KDDA
chains in the Genus database with same CATH topology
2EBBA 2V6SA 3JSTA 1F93A 4WILA 1RU0A 3HXAA 1USOA 2V6UA 4C45A 1USMA 2V6TA 1DCPA 1DCOA 4LOWA 1DCHA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2EBB A;  2V6S A;  3JST A;  1F93 A;  4WIL A;  1RU0 A;  3HXA A;  1USO A;  2V6U A;  4C45 A;  1USM A;  2V6T A;  1DCP A;  1DCO A;  4LOW A;  1DCH A; 
#chains in the Genus database with same CATH topology
 1WOR A;  4BBR C;  5C44 K;  3QX3 A;  4KMA A;  4FZB A;  4BLB A;  4G0V A;  2R92 C;  2E2H K;  3GTM K;  4A3E K;  4A3K K;  1BJT A;  3N0B A;  4GFQ A;  4O2D A;  5C44 C;  4C45 A;  2E2H C;  1WOS A;  2RH6 A;  5IYB K;  5CHP A;  3VA7 A;  1IL2 A;  3EQL A;  3GTM C;  4A3E C;  4A3K C;  4LJZ A;  4GTD A;  2BE5 A;  1TWC A;  1I50 K;  1ZVU A;  2PMZ D;  2CW0 A;  1PJ6 A;  3S14 K;  1XZQ B;  1HI9 A;  4A3M K;  5IYB C;  1O2F B;  1TWG K;  4LK0 A;  3LAJ A;  3S2H K;  4WIL A;  1DD5 A;  4BXX K;  5TMC A;  3T01 A;  1TWA C;  3HOZ K;  5IYD K;  3H3V D;  1I50 C;  4LLG A;  1F7U A;  3GEH A;  4BY1 C;  3S14 C;  1IE0 A;  3GTG A;  3I4M K;  4A3M C;  4P5A A;  1TWG C;  2JA7 K;  4GTB A;  3S2H C;  3N3Y A;  1BGW A;  2E2H A;  1B4A A;  3GTJ A;  3BP3 A;  1O2B A;  4BXX C;  2V6T A;  3ERE D;  3GTK A;  3GTM A;  3HOZ C;  5IYD C;  5FJ8 K;  1G51 A;  4MEX A;  1YX2 A;  2GSO A;  3I4M C;  1IBA A;  1EH1 A;  4G0W A;  2JA7 C;  2VUM K;  3G4A A;  2JA8 K;  1TWF K;  2B63 K;  4A3C K;  1WSR A;  5IOS A;  1IW7 A;  1I6V A;  4BLA A;  3BUE A;  4A3J K;  2R93 K;  3IPJ A;  1USM A;  3GEE A;  5JVO A;  1I50 A;  2YU9 K;  4Y52 K;  3S15 K;  3S0X A;  1Y1W A;  3HXA A;  5CJ9 A;  5HL8 A;  2JA8 C;  1TWF C;  2B63 C;  4A3C C;  1TWG A;  2XCQ A;  3GSI A;  4A3J C;  2NVX K;  3GTL K;  3L4K A;  4G7H A;  2YU9 C;  4Y52 C;  2WB1 L;  2R7Z C;  3TTG A;  1J6W A;  4OIP A;  3GDZ A;  5EGE A;  3GTQ K;  4Q5S A;  2PPB A;  1HQM A;  2E2J K;  3A8K A;  4C3I K;  3V4G A;  3S17 K;  4X6A K;  2NVX C;  3GTL C;  4NOI A;  4JK1 A;  1SMY A;  3HOV K;  4OIQ A;  1RU0 A;  1K83 K;  3GTQ C;  3GTP A;  4KAT A;  2VUM A;  2E2J C;  2FQO A;  4C3I C;  1R9T K;  3S17 C;  4X6A C;  5D4D A;  3HOX K;  3S2D K;  2B63 A;  2PA8 L;  2V6U A;  2JA5 K;  1WQF A;  1JOE A;  3M3Y K;  3HOV C;  2R93 A;  5M5Y K;  3AD8 C;  1K83 C;  1VJE A;  2GSU A;  4ZH4 A;  1SFO K;  1XPP A;  1R9T C;  1F7V A;  3HOX C;  3S2D C;  2A6H A;  4KM8 A;  2V6S A;  2JA5 C;  1TWA K;  1YCL A;  3ADA C;  3M3Y C;  4AYB L;  3OPF A;  4GTL A;  3GTL A;  1O28 A;  2GAH C;  4KB4 A;  5FLM K;  4BY1 K;  4GZY A;  1XXA A;  2A6E A;  5C4J K;  4A3L K;  3K7A K;  3PO3 K;  1SFO C;  1I3Q K;  1EI6 A;  4YG2 A;  3AD9 C;  1C0A A;  1ISE A;  1WCM K;  3FKI K;  3FOF A;  3GTQ A;  2R92 A;  4FM9 A;  3RZO K;  1XXB A;  2WB1 D;  3GEI A;  1IQ0 A;  2NVY K;  1PJ7 A;  1YNJ A;  5FLM C;  1O29 A;  4A3F K;  5C4J C;  3HOY K;  4A3L C;  3K7A C;  3PO3 C;  1WSV A;  1I3Q C;  4XLP A;  1BS2 A;  4OIN A;  4KN4 A;  3FKI C;  1WCM C;  2CFA A;  2W7V A;  3T00 A;  2O5I A;  3RZO C;  3N0C A;  1R9T A;  3CQZ K;  4G7Z A;  3M4O K;  2NVY C;  3I4N K;  3SZY A;  2JA5 A;  4XSZ A;  4A3F C;  3HOY C;  1USO A;  4MEY A;  4KC6 A;  1KQ4 A;  2PA8 D;  4KAW X;  5M3M K;  4GTF A;  1Y1V K;  3S1R K;  2Y3P A;  1SFO A;  1WOO A;  3CQZ C;  5M5W K;  2NVT K;  3S1M K;  2KWA A;  2JA6 K;  3M4O C;  1X31 C;  3I4N C;  1TWA A;  4KN7 A;  1WOP A;  1O25 A;  1O26 A;  1WIH A;  2XCR B;  3TFJ A;  1XZP A;  4A93 K;  2R7Z K;  4GTE A;  4G0U A;  2XCO A;  1Y1V C;  5IYC C;  3S1R C;  3S1Q K;  5L46 A;  1O2A A;  1I3Q A;  4AYB D;  3S1M C;  2NVT C;  1VRQ C;  2PHC B;  3FKI A;  1WCM A;  2JA6 C;  3WOD A;  2NVY A;  4A93 C;  1AB4 A;  5M3F K;  2CFA B;  4XLN A;  3S1Q C;  3JST A;  2JA7 A;  3SZZ A;  4QJV B;  1UV7 A;  4KM9 A;  1J6V A;  3CQZ A;  1TWC K;  2GSN A;  5C3E K;  1TWH K;  4GTC A;  4A3B K;  4C2M K;  1ZYR A;  3AH5 A;  2E2I K;  5IP7 K;  4YFK A;  2A69 A;  4J3N A;  2ZFZ A;  1TWF A;  1Y1V A;  4C3H C;  1BDF A;  1TWC C;  5IOT A;  5C3E C;  1TWH C;  2JA6 A;  5C4X K;  1IS1 A;  4A3B C;  1O24 A;  1XZP B;  1EQR A;  1VLO A;  4C2M C;  3GTG K;  1DCH A;  3H0G K;  2E2I C;  2YU9 A;  2Y0S L;  3PO2 K;  5IP7 C;  1J6X A;  2R7Z A;  4WJ3 M;  3GTJ K;  3GTK K;  4RMF A;  5C4X C;  2NVX A;  1I6H C;  5M5X K;  3MML B;  3G4C A;  3GTG C;  1J98 A;  3H0G C;  1V5V A;  2FQT A;  5IOQ A;  3PO2 C;  2P5M A;  5EGH A;  2JH3 A;  3GTJ C;  1WQG A;  4YFN A;  3GTK C;  1WQH A;  4A3I K;  4Y7N K;  3GTO K;  4GTA A;  4KMH A;  1XXC A;  4KMD A;  1TWH A;  1Y1W K;  4G7O A;  2EBB A;  4KAS A;  3TFI A;  3A8J A;  2ZUE A;  4A3D K;  3HKZ L;  5TMF A;  2E2I A;  4DDQ A;  1K83 A;  3Q3Q A;  3LAP A;  5JFE A;  3BP8 C;  4A3I C;  4OIO A;  4QJV A;  4Y7N C;  3S16 K;  3GTO C;  4KB2 A;  1DCP A;  4LR2 A;  1O27 A;  4A3G K;  3S1N K;  3T02 A;  4BKW A;  1EK8 A;  4PAA A;  1Y1W C;  1JVI A;  4QIW L;  4BBS K;  4A3D C;  3H0G A;  2WAQ L;  4Q4Z A;  1INN A;  3RZD K;  5IYC K;  4LOW A;  2D6F C;  4C3J K;  1ZXO A;  3GIR A;  3S16 C;  4GT9 A;  3AQP A;  4A3G C;  3S1N C;  2Y0S D;  3CAG A;  4AH6 A;  4KAR A;  3AQO A;  4LQY A;  4BBS C;  4WJ4 A;  4ILD A;  2GAG C;  4MQ9 A;  3GTP K;  3RZD C;  1F9N A;  4LK1 A;  3HOW K;  4M1X A;  3FOE A;  2O5J A;  4C3J C;  4KMU A;  4P5B A;  1B4B A;  2NVQ K;  3GTO A;  3HOU K;  3DXJ A;  4BY7 K;  1ZQ1 C;  3GTP C;  5E68 A;  2VUM C;  3HOW C;  1YNN A;  1JQW A;  3TFH A;  1VH2 A;  2RGR A;  1GE9 A;  1L0W A;  2PMZ L;  5IP9 K;  1VGX A;  5TJ3 A;  4C3H K;  2ZUF A;  3A8I A;  4XCH A;  2NVQ C;  3AD7 C;  3HOU C;  3FHZ A;  1DCO A;  2R93 C;  3NUH A;  4BY7 C;  5IOR A;  3HKZ D;  4P9S A;  3ORE A;  3LPX A;  4YFX A;  4BBR K;  3S15 C;  1ZBS A;  4PAB A;  2P8T A;  1PJ5 A;  3H3V L;  5IP9 C;  4XSX A;  2R92 K;  1XZQ A;  4OIR A;  3L4J A;  2A68 A;  1EFW A;  1F93 A;  3OEP A;  4QIW D;  1I6H K;  2WAQ D;  4KDD A; 
#chains in the Genus database with same CATH homology
 2EBB A;  2V6S A;  3JST A;  1F93 A;  4WIL A;  1RU0 A;  3HXA A;  1USO A;  2V6U A;  4C45 A;  1USM A;  2V6T A;  1DCP A;  1DCO A;  4LOW A;  1DCH A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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