3HOWC

Complete rna polymerase ii elongation complex iii with a t-u mismatch and a frayed rna 3'-uridine
Total Genus 49
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
49
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Structural basis of transcription: mismatch-specific fidelity mechanisms and paused RNA polymerase II with frayed RNA.
pubmed doi rcsb
molecule tags Transcription,transferase/dna/rna hybrid
total genus 49
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2009-06-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3howC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3howC01
4BBSC 3GTMC 1WCMK 4MEXA 4BBRC 4QJVB 4YFKA 3RZDK 2NVQK 3S15C 4XSXA 2JA8C 3M3YC 1I3QC 4C3JK 3GTKC 4OIPA 4A93C 3S1NK 4A3CK 4C3IK 5IP9K 4A3EK 1Y1WC 1TWCC 2CW0A 3CQZC 3GTGC 1I6HC 1K83K 2O5JA 3HOXC 3GTLK 1TWAC 4ZH4A 4JK1A 3RZOK 1I50K 4Y7NC 1TWFC 4LK0A 3HOWK 2R7ZC 2Y0SL 4LLGA 4C2MC 4A3GC 3GTPC 5C4XC 3H3VL 5C4JK 3GTJC 1R9TK 3PO3K 2JA5C 2JA6C 3HOYC 3FKIK 3S1RC 5IYBK 1IW7A 4OIOA 1TWHC 3PO2C 2A6EA 3S17C 2WAQL 2A68A 5C44K 2R92C 3K7AC 2WB1L 5IYCK 4KN7A 4Y52K 1I6VA 3HKZD 3WODA 5IP7K 2E2HK 3M4OK 5M5XK 1SFOK 2WAQD 3HOZC 3S2HC 2R93K 4BBSK 3GTMK 2PMZL 2PA8L 2WB1D 3H0GC 5TMFA 4QJVA 4BBRK 3S15K 4YG2A 2JA8K 3M3YK 1I3QK 3GTKK 4A3KC 4BY1C 2PPBA 3S14C 1XPPA 4A93K 2PMZD 1TWCK 2PA8D 2NVXC 3CQZK 1Y1WK 1BDFA 3GTGK 1I6HK 3HOXK 2NVTC 1TWAK 4KMUA 2B63C 4XLNA 4Y7NK 1TWFK 2NVYC 1YNNA 5M5YK 2R7ZK 3GTOC 4C2MK 4A3GK 1YNJA 3GTPK 5C4XK 3GTJK 2JA5K 3I4NC 4YFXA 3HKZL 2JA6K 3HOYK 3S1RK 4AYBL 5FLMC 1SMYA 1TWHK 3PO2K 3S17K 1TWGC 3K7AK 5C3EC 5IYDC 5D4DA 2JA7C 2R92K 2E2IC 4X6AC 4AYBD 2YU9C 3HOZK 3S2HK 3H0GK 1Y1VC 2A69A 2O5IA 4OIQA 4A3KK 4BY1K 2E2JC 3S14K 3HOUC 1HQMA 4QIWD 2NVXK 3S16C 4A3JC 3GTQC 2A6HA 4A3DC 4Q4ZA 2NVTK 4A3MC 4KN4A 4A3FC 4A3IC 3EQLA 3S1MC 2B63K 4XSZA 4A3LC 3HOVC 2NVYK 3GTOK 4BXXC 4C3HC 3I4MC 4A3BC 2BE5A 3S2DC 4LJZA 3I4NK 4NOIA 4MQ9A 4OINA 2VUMC 4XLPA 4BY7C 5FLMK 3S1QC 1TWGK 1WCMC 5C3EK 3RZDC 2NVQC 5M3FK 2E2IK 2JA7K 4X6AK 5IYDK 4C3JC 2YU9K 3S1NC 4A3CC 4C3IC 4GZYA 5IP9C 4A3EC 4QIWL 1Y1VK 1K83C 3GTLC 4G7ZA 3RZOC 1I50C 4MEYA 2E2JK 3HOUK 5M3MK 4G7OA 3HOWC 4OIRA 3S16K 4A3JK 3GTQK 4A3DK 5M5WK 4YFNA 3DXJA 4A3FK 4A3IK 4A3MK 3S1MK 5C4JC 1R9TC 3PO3C 4A3LK 1ZYRA 3HOVK 3FKIC 5IYBC 4LK1A 2Y0SD 4C3HK 4BXXK 5C44C 3H3VD 3I4MK 4A3BK 3S2DK 5IYCC 4Y52C 5FJ8K 2VUMK 5IP7C 2E2HC 3M4OC 5TMCA 1SFOC 4BY7K 4Q5SA 3S1QK 2R93C 4G7HA
chains in the Genus database with same CATH superfamily
3GTMC 1WCMK 4BBRC 3LPXA 3JSTA 3RZDK 2NVQK 3S15C 3M3YC 4C3JK 4A93C 3S1NK 2KQ1A 3FHZA 4A3CK 5IP9K 2CFAA 3GDZA 3CQZC 2O5JA 4C45A 1I50K 3GTOA 1TWFC 4BKWA 3H3VL 3GEHA 2JA5C 3HOYC 4KB4A 5IYBK 3S17C 5DM6S 3K7AC 2YU9A 1XZPA 2KWAA 5JFEA 1BJTA 5IORA 2E2HK 3M4OK 1SFOK 3S2HC 2RH6A 3BP3A 1WSRA 2JA8K 1I3QK 1AB4A 3GTKK 3TFHA 3S14C 1XPPA 1Y1WK 1BDFA 1I6HK 3GEEA 3AD8C 3AQOA 1O25A 4XCHA 1O2FB 3GTOC 4C2MK 4A3GK 3GTPK 4LQYA 4YFXA 2JA6K 2V6UA 4AYBL 1SMYA 1INNA 3PO2K 1UV7A 1EQRA 2YU9C 5IOSA 3ADAC 1XXBA 4DDQA 1Y1VC 4OIQA 5CHPA 4O2DA 4BY1K 4WJ3M 3HOUC 1VGXA 2FQTA 4A3JC 4A3DC 2A6HA 1O27A 1R9TA 4GTFA 2NVTK 1O29A 3HOVC 4GTEA 5CJ9A 3I4MC 1F93A 3I4NK 4MQ9A 3T00A 4XLPA 4BY7C 2ZUEA 3S1QC 1FEUA 4GT9A 4G0UA 1BS2A 5IYDK 2JA7K 2E2IK 3LAJA 4WJ4A 4LOWA 3GEIA 4C3IC 3GTGA 4GZYA 4A3EC 3TFIA 1K83C 3T01A 2RGRA 4G7ZA 3RZOC 4RMFA 4MEYA 3VA7A 1EI6A 1YCLA 2ZJPS 5HQHA 4A3IK 5C4JC 1R9TC 4A3LK 4KM8A 4PABA 4BXXK 5JVGS 1DCPA 5FJ8K 2KXYA 2R93A 3H0GA 4G7HA 4QJVB 4U67S 1ZXOA 3OEPA 5L46A 2NVXA 3SZZA 2CW0A 3GTGC 3HOXC 1F7VA 1J6WA 2W7VA 1TWFA 4Y7NC 3A8IA 4LK0A 3HOWK 5HL8A 1BGWA 1IE0A 3FKIK 1WSVA 3S1RC 1ZBSA 4OIOA 1TWHC 2WAQL 2A6EA 2KPUA 5C44K 2WB1L 4KN7A 1IS1A 1JOEA 3HOZC 4BBSK 2PMZL 3NUHA 4KMHA 3H0GC 1YX2A 1XZQB 3GTQA 1TWCK 2NVXC 5E68A 1TWAK 1ISEA 2P5MA 2NVYC 1YNNA 2R7ZK 1ZVUA 4GTBA 1YNJA 5C4XK 4KC6A 3Q3QA 3GTJK 1B4BA 3N3YA 4LR2A 4WF9S 2R92K 4X6AC 4AYBD 5JVOA 1Y1VA 5HL7S 1WIHA 3MMLB 4A3KK 1HQMA 2GAGC 4QIWD 2ZJRS 3S16C 3GTQC 4KN4A 1VJEA 3IPJA 2B63K 4XSZA 4KAWX 3L4JA 1VLOA 3G4AA 2BE5A 2E2HA 4NOIA 2P8TA 4GTDA 5FLMK 4P9SA 1TWGK 1WCMC 5C3EK 3RZDC 2NVQC 5M3FK 3GTKA 4C3JC 1Y1WA 3S1NC 4A3CC 2CFAB 1K83A 5IP9C 4QIWL 1EK8A 3CF5S 1I50C 2E2JK 1O26A 5M3MK 4G7OA 1IQ0A 3BP8C 3GTPA 4AH6A 5M5WK 4A3MK 4A3FK 3S1MK 3TTGA 2JA6A 1O24A 3T02A 5IYBC 3AH5A 2Y0SD 4C3HK 5DM7S 4A3BK 1XZPB 3S2DK 3HXAA 2D6FC 2VUMK 2E2HC 3M4OC 1SFOC 1B4AA 3PIOS 1IL2A 2GAHC 2JA8C 1I3QC 4WFBS 3GTKC 4OIPA 1DCHA 1DCOA 1Y1WC 4WFNS 1I6HC 2PHCB 3GTLK 4ZH4A 3BUEA 1PJ7A 5JVHS 2Y0SL 1VH2A 3FOFA 4LLGA 4C2MC 4A3GC 3GTPC 1J6XA 3PO3K 2JA6C 1TWHA 3PO2C 4ILDA 2JA7A 2E2IA 5IYCK 4Y52K 1I6VA 3WODA 5IP7K 4GTAA 2WAQD 2R93K 3GTMK 1ZQ1C 2WB1D 2PA8L 3AD9C 4BBRK 5IOQA 3DLLS 3QX3A 3S15K 4YG2A 3M3YK 4IOCS 4BY1C 5EGHA 2PPBA 4A93K 2PMZD 2V6SA 3CQZK 2NVTC 4KM9A 1X31C 2NVYA 4XLNA 1TWFK 5IOTA 2JA5K 3I4NC 3HOYK 3S17K 1WQGA 3K7AK 5IYDC 2JA7C 1J98A 2E2IC 3ERED 1RU0A 3G4CA 3S2HK 3LYWA 2XCRB 3S14K 2JH3A 3A8KA 1J6VA 4A3IC 2ZJQS 3EQLA 4A3LC 3GTOK 4BXXC 1O28A 4LJZA 4G0WA 1WCMA 1C0AA 3AD7C 2YU9K 1TWCA 1TWAA 1Y1VK 2ZUFA 1I50A 3SZYA 3HOUK 3V4GA 2R7ZA 3HOWC 4OIRA 4A3JK 4A3DK 3GTJA 1EFWA 4YFNA 4M1XA 1ZYRA 3HOVK 3FKIC 2V6TA 3L4KA 4LK1A 2R92A 4KB2A 5C44C 3I4MK 4KARA 1VRQC 5EGEA 1SFOA 4BY7K 5TMCA 1PJ5A 3S1QK 3GIRA 4BBSC 4MEXA 4YFKA 1I3QA 4XSXA 4GTCA 4C3IK 4P5BA 4A3EK 4GFQA 1TWCC 1K83K 2B63A 1TWAC 4JK1A 3RZOK 1F9NA 2R7ZC 4FM9A 3AQPA 5C4XC 5C4JK 3GTJC 1R9TK 1HI9A 4KDDA 1IW7A 1TWGA 4WCES 2A68A 2R92C 3LAPA 3HKZD 4WILA 3TFJA 5M5XK 2GSOA 3N0CA 1L0WA 5TMFA 1USMA 4QJVA 1O2BA 4A3KC 1DD5A 5TJ3A 4IO9S 2PA8D 4GTLA 3GTGK 3HOXK 4IOAS 4G0VA 2EBBA 4KMUA 1WOOA 2XCOA 2B63C 3GSIA 4Y7NK 2FQOA 4KMDA 3S0XA 4P5AA 5M5YK 1JQWA 2VUMA 3HKZL 3S1RK 3OREA 5FLMC 1TWHK 1XXCA 2L5NA 3OPFA 1TWGC 5C3EC 5D4DA 4PAAA 4J3NA 1WQFA 3HOZK 3GTLA 3H0GK 2A69A 2O5IA 1IBAA 2XCQA 2E2JC 3A8JA 1F7UA 3PIPS 1XZQA 4KASA 2NVXK 4Q4ZA 1G51A 4A3MC 4A3FC 3S1MC 1KQ4A 1JVIA 1GE9A 2NVYK 4BLAA 4C3HC 3FOEA 4A3BC 3S2DC 4OINA 2VUMC 1USOA 3GTMA 1WOSA 2Y3PA 1WQHA 4X6AK 3CQZA 2GSNA 4BLBA 1WOPA 3GTLC 4KATA 1O2AA 1EH1A 1XXAA 3S16K 2L3UA 3GTQK 2GSUA 1V5VA 3CAGA 2JA5A 3DXJA 3FKIA 3PO3C 4FZBA 2ZFZA 3H3VD 5IYCC 4Y52C 4KMAA 5IP7C 4WFAS 1PJ6A 4Q5SA 3N0BA 2R93C 1WORA
chains in the Genus database with same CATH topology
4BBSC 3GTMC 1WCMK 4MEXA 4BBRC 4QJVB 4YFKA 3RZDK 2NVQK 3S15C 4XSXA 2JA8C 3M3YC 1I3QC 4C3JK 3GTKC 4OIPA 4A93C 3S1NK 4A3CK 4C3IK 5IP9K 4A3EK 1Y1WC 1TWCC 2CW0A 3CQZC 3GTGC 1I6HC 1K83K 2O5JA 3HOXC 3GTLK 1TWAC 4ZH4A 4JK1A 3RZOK 1I50K 4Y7NC 1TWFC 4LK0A 3HOWK 2R7ZC 2Y0SL 4LLGA 4C2MC 4A3GC 3GTPC 5C4XC 3H3VL 5C4JK 3GTJC 1R9TK 3PO3K 2JA5C 2JA6C 3HOYC 3FKIK 3S1RC 5IYBK 1IW7A 4OIOA 1TWHC 3PO2C 2A6EA 3S17C 2WAQL 2A68A 5C44K 2R92C 3K7AC 2WB1L 5IYCK 4KN7A 4Y52K 1I6VA 3HKZD 3WODA 5IP7K 2E2HK 3M4OK 5M5XK 1SFOK 2WAQD 3HOZC 3S2HC 2R93K 4BBSK 3GTMK 2PMZL 2PA8L 2WB1D 3H0GC 5TMFA 4QJVA 4BBRK 3S15K 4YG2A 2JA8K 3M3YK 1I3QK 3GTKK 4A3KC 4BY1C 2PPBA 3S14C 1XPPA 4A93K 2PMZD 1TWCK 2PA8D 2NVXC 3CQZK 1Y1WK 1BDFA 3GTGK 1I6HK 3HOXK 2NVTC 1TWAK 4KMUA 2B63C 4XLNA 4Y7NK 1TWFK 2NVYC 1YNNA 5M5YK 2R7ZK 3GTOC 4C2MK 4A3GK 1YNJA 3GTPK 5C4XK 3GTJK 2JA5K 3I4NC 4YFXA 3HKZL 2JA6K 3HOYK 3S1RK 4AYBL 5FLMC 1SMYA 1TWHK 3PO2K 3S17K 1TWGC 3K7AK 5C3EC 5IYDC 5D4DA 2JA7C 2R92K 2E2IC 4X6AC 4AYBD 2YU9C 3HOZK 3S2HK 3H0GK 1Y1VC 2A69A 2O5IA 4OIQA 4A3KK 4BY1K 2E2JC 3S14K 3HOUC 1HQMA 4QIWD 2NVXK 3S16C 4A3JC 3GTQC 2A6HA 4A3DC 4Q4ZA 2NVTK 4A3MC 4KN4A 4A3FC 4A3IC 3EQLA 3S1MC 2B63K 4XSZA 4A3LC 3HOVC 2NVYK 3GTOK 4BXXC 4C3HC 3I4MC 4A3BC 2BE5A 3S2DC 4LJZA 3I4NK 4NOIA 4MQ9A 4OINA 2VUMC 4XLPA 4BY7C 5FLMK 3S1QC 1TWGK 1WCMC 5C3EK 3RZDC 2NVQC 5M3FK 2E2IK 2JA7K 4X6AK 5IYDK 4C3JC 2YU9K 3S1NC 4A3CC 4C3IC 4GZYA 5IP9C 4A3EC 4QIWL 1Y1VK 1K83C 3GTLC 4G7ZA 3RZOC 1I50C 4MEYA 2E2JK 3HOUK 5M3MK 4G7OA 3HOWC 4OIRA 3S16K 4A3JK 3GTQK 4A3DK 5M5WK 4YFNA 3DXJA 4A3FK 4A3IK 4A3MK 3S1MK 5C4JC 1R9TC 3PO3C 4A3LK 1ZYRA 3HOVK 3FKIC 5IYBC 4LK1A 2Y0SD 4C3HK 4BXXK 5C44C 3H3VD 3I4MK 4A3BK 3S2DK 5IYCC 4Y52C 5FJ8K 2VUMK 5IP7C 2E2HC 3M4OC 5TMCA 1SFOC 4BY7K 4Q5SA 3S1QK 2R93C 4G7HA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4BBS C;  3GTM C;  1WCM K;  4MEX A;  4BBR C;  4QJV B;  4YFK A;  3RZD K;  2NVQ K;  3S15 C;  4XSX A;  2JA8 C;  3M3Y C;  1I3Q C;  4C3J K;  3GTK C;  4OIP A;  4A93 C;  3S1N K;  4A3C K;  4C3I K;  5IP9 K;  4A3E K;  1Y1W C;  1TWC C;  2CW0 A;  3CQZ C;  3GTG C;  1I6H C;  1K83 K;  2O5J A;  3HOX C;  3GTL K;  1TWA C;  4ZH4 A;  4JK1 A;  3RZO K;  1I50 K;  4Y7N C;  1TWF C;  4LK0 A;  3HOW K;  2R7Z C;  2Y0S L;  4LLG A;  4C2M C;  4A3G C;  3GTP C;  5C4X C;  3H3V L;  5C4J K;  3GTJ C;  1R9T K;  3PO3 K;  2JA5 C;  2JA6 C;  3HOY C;  3FKI K;  3S1R C;  5IYB K;  1IW7 A;  4OIO A;  1TWH C;  3PO2 C;  2A6E A;  3S17 C;  2WAQ L;  2A68 A;  5C44 K;  2R92 C;  3K7A C;  2WB1 L;  5IYC K;  4KN7 A;  4Y52 K;  1I6V A;  3HKZ D;  3WOD A;  5IP7 K;  2E2H K;  3M4O K;  5M5X K;  1SFO K;  2WAQ D;  3HOZ C;  3S2H C;  2R93 K;  4BBS K;  3GTM K;  2PMZ L;  2PA8 L;  2WB1 D;  3H0G C;  5TMF A;  4QJV A;  4BBR K;  3S15 K;  4YG2 A;  2JA8 K;  3M3Y K;  1I3Q K;  3GTK K;  4A3K C;  4BY1 C;  2PPB A;  3S14 C;  1XPP A;  4A93 K;  2PMZ D;  1TWC K;  2PA8 D;  2NVX C;  3CQZ K;  1Y1W K;  1BDF A;  3GTG K;  1I6H K;  3HOX K;  2NVT C;  1TWA K;  4KMU A;  2B63 C;  4XLN A;  4Y7N K;  1TWF K;  2NVY C;  1YNN A;  5M5Y K;  2R7Z K;  3GTO C;  4C2M K;  4A3G K;  1YNJ A;  3GTP K;  5C4X K;  3GTJ K;  2JA5 K;  3I4N C;  4YFX A;  3HKZ L;  2JA6 K;  3HOY K;  3S1R K;  4AYB L;  5FLM C;  1SMY A;  1TWH K;  3PO2 K;  3S17 K;  1TWG C;  3K7A K;  5C3E C;  5IYD C;  5D4D A;  2JA7 C;  2R92 K;  2E2I C;  4X6A C;  4AYB D;  2YU9 C;  3HOZ K;  3S2H K;  3H0G K;  1Y1V C;  2A69 A;  2O5I A;  4OIQ A;  4A3K K;  4BY1 K;  2E2J C;  3S14 K;  3HOU C;  1HQM A;  4QIW D;  2NVX K;  3S16 C;  4A3J C;  3GTQ C;  2A6H A;  4A3D C;  4Q4Z A;  2NVT K;  4A3M C;  4KN4 A;  4A3F C;  4A3I C;  3EQL A;  3S1M C;  2B63 K;  4XSZ A;  4A3L C;  3HOV C;  2NVY K;  3GTO K;  4BXX C;  4C3H C;  3I4M C;  4A3B C;  2BE5 A;  3S2D C;  4LJZ A;  3I4N K;  4NOI A;  4MQ9 A;  4OIN A;  2VUM C;  4XLP A;  4BY7 C;  5FLM K;  3S1Q C;  1TWG K;  1WCM C;  5C3E K;  3RZD C;  2NVQ C;  5M3F K;  2E2I K;  2JA7 K;  4X6A K;  5IYD K;  4C3J C;  2YU9 K;  3S1N C;  4A3C C;  4C3I C;  4GZY A;  5IP9 C;  4A3E C;  4QIW L;  1Y1V K;  1K83 C;  3GTL C;  4G7Z A;  3RZO C;  1I50 C;  4MEY A;  2E2J K;  3HOU K;  5M3M K;  4G7O A;  3HOW C;  4OIR A;  3S16 K;  4A3J K;  3GTQ K;  4A3D K;  5M5W K;  4YFN A;  3DXJ A;  4A3F K;  4A3I K;  4A3M K;  3S1M K;  5C4J C;  1R9T C;  3PO3 C;  4A3L K;  1ZYR A;  3HOV K;  3FKI C;  5IYB C;  4LK1 A;  2Y0S D;  4C3H K;  4BXX K;  5C44 C;  3H3V D;  3I4M K;  4A3B K;  3S2D K;  5IYC C;  4Y52 C;  5FJ8 K;  2VUM K;  5IP7 C;  2E2H C;  3M4O C;  5TMC A;  1SFO C;  4BY7 K;  4Q5S A;  3S1Q K;  2R93 C;  4G7H A; 
#chains in the Genus database with same CATH topology
 3GTM C;  1WCM K;  4BBR C;  3LPX A;  3JST A;  3RZD K;  2NVQ K;  3S15 C;  3M3Y C;  4C3J K;  4A93 C;  3S1N K;  2KQ1 A;  3FHZ A;  4A3C K;  5IP9 K;  2CFA A;  3GDZ A;  3CQZ C;  2O5J A;  4C45 A;  1I50 K;  3GTO A;  1TWF C;  4BKW A;  3H3V L;  3GEH A;  2JA5 C;  3HOY C;  4KB4 A;  5IYB K;  3S17 C;  5DM6 S;  3K7A C;  2YU9 A;  1XZP A;  2KWA A;  5JFE A;  1BJT A;  5IOR A;  2E2H K;  3M4O K;  1SFO K;  3S2H C;  2RH6 A;  3BP3 A;  1WSR A;  2JA8 K;  1I3Q K;  1AB4 A;  3GTK K;  3TFH A;  3S14 C;  1XPP A;  1Y1W K;  1BDF A;  1I6H K;  3GEE A;  3AD8 C;  3AQO A;  1O25 A;  4XCH A;  1O2F B;  3GTO C;  4C2M K;  4A3G K;  3GTP K;  4LQY A;  4YFX A;  2JA6 K;  2V6U A;  4AYB L;  1SMY A;  1INN A;  3PO2 K;  1UV7 A;  1EQR A;  2YU9 C;  5IOS A;  3ADA C;  1XXB A;  4DDQ A;  1Y1V C;  4OIQ A;  5CHP A;  4O2D A;  4BY1 K;  4WJ3 M;  3HOU C;  1VGX A;  2FQT A;  4A3J C;  4A3D C;  2A6H A;  1O27 A;  1R9T A;  4GTF A;  2NVT K;  1O29 A;  3HOV C;  4GTE A;  5CJ9 A;  3I4M C;  1F93 A;  3I4N K;  4MQ9 A;  3T00 A;  4XLP A;  4BY7 C;  2ZUE A;  3S1Q C;  1FEU A;  4GT9 A;  4G0U A;  1BS2 A;  5IYD K;  2JA7 K;  2E2I K;  3LAJ A;  4WJ4 A;  4LOW A;  3GEI A;  4C3I C;  3GTG A;  4GZY A;  4A3E C;  3TFI A;  1K83 C;  3T01 A;  2RGR A;  4G7Z A;  3RZO C;  4RMF A;  4MEY A;  3VA7 A;  1EI6 A;  1YCL A;  2ZJP S;  5HQH A;  4A3I K;  5C4J C;  1R9T C;  4A3L K;  4KM8 A;  4PAB A;  4BXX K;  5JVG S;  1DCP A;  5FJ8 K;  2KXY A;  2R93 A;  3H0G A;  4G7H A;  4QJV B;  4U67 S;  1ZXO A;  3OEP A;  5L46 A;  2NVX A;  3SZZ A;  2CW0 A;  3GTG C;  3HOX C;  1F7V A;  1J6W A;  2W7V A;  1TWF A;  4Y7N C;  3A8I A;  4LK0 A;  3HOW K;  5HL8 A;  1BGW A;  1IE0 A;  3FKI K;  1WSV A;  3S1R C;  1ZBS A;  4OIO A;  1TWH C;  2WAQ L;  2A6E A;  2KPU A;  5C44 K;  2WB1 L;  4KN7 A;  1IS1 A;  1JOE A;  3HOZ C;  4BBS K;  2PMZ L;  3NUH A;  4KMH A;  3H0G C;  1YX2 A;  1XZQ B;  3GTQ A;  1TWC K;  2NVX C;  5E68 A;  1TWA K;  1ISE A;  2P5M A;  2NVY C;  1YNN A;  2R7Z K;  1ZVU A;  4GTB A;  1YNJ A;  5C4X K;  4KC6 A;  3Q3Q A;  3GTJ K;  1B4B A;  3N3Y A;  4LR2 A;  4WF9 S;  2R92 K;  4X6A C;  4AYB D;  5JVO A;  1Y1V A;  5HL7 S;  1WIH A;  3MML B;  4A3K K;  1HQM A;  2GAG C;  4QIW D;  2ZJR S;  3S16 C;  3GTQ C;  4KN4 A;  1VJE A;  3IPJ A;  2B63 K;  4XSZ A;  4KAW X;  3L4J A;  1VLO A;  3G4A A;  2BE5 A;  2E2H A;  4NOI A;  2P8T A;  4GTD A;  5FLM K;  4P9S A;  1TWG K;  1WCM C;  5C3E K;  3RZD C;  2NVQ C;  5M3F K;  3GTK A;  4C3J C;  1Y1W A;  3S1N C;  4A3C C;  2CFA B;  1K83 A;  5IP9 C;  4QIW L;  1EK8 A;  3CF5 S;  1I50 C;  2E2J K;  1O26 A;  5M3M K;  4G7O A;  1IQ0 A;  3BP8 C;  3GTP A;  4AH6 A;  5M5W K;  4A3M K;  4A3F K;  3S1M K;  3TTG A;  2JA6 A;  1O24 A;  3T02 A;  5IYB C;  3AH5 A;  2Y0S D;  4C3H K;  5DM7 S;  4A3B K;  1XZP B;  3S2D K;  3HXA A;  2D6F C;  2VUM K;  2E2H C;  3M4O C;  1SFO C;  1B4A A;  3PIO S;  1IL2 A;  2GAH C;  2JA8 C;  1I3Q C;  4WFB S;  3GTK C;  4OIP A;  1DCH A;  1DCO A;  1Y1W C;  4WFN S;  1I6H C;  2PHC B;  3GTL K;  4ZH4 A;  3BUE A;  1PJ7 A;  5JVH S;  2Y0S L;  1VH2 A;  3FOF A;  4LLG A;  4C2M C;  4A3G C;  3GTP C;  1J6X A;  3PO3 K;  2JA6 C;  1TWH A;  3PO2 C;  4ILD A;  2JA7 A;  2E2I A;  5IYC K;  4Y52 K;  1I6V A;  3WOD A;  5IP7 K;  4GTA A;  2WAQ D;  2R93 K;  3GTM K;  1ZQ1 C;  2WB1 D;  2PA8 L;  3AD9 C;  4BBR K;  5IOQ A;  3DLL S;  3QX3 A;  3S15 K;  4YG2 A;  3M3Y K;  4IOC S;  4BY1 C;  5EGH A;  2PPB A;  4A93 K;  2PMZ D;  2V6S A;  3CQZ K;  2NVT C;  4KM9 A;  1X31 C;  2NVY A;  4XLN A;  1TWF K;  5IOT A;  2JA5 K;  3I4N C;  3HOY K;  3S17 K;  1WQG A;  3K7A K;  5IYD C;  2JA7 C;  1J98 A;  2E2I C;  3ERE D;  1RU0 A;  3G4C A;  3S2H K;  3LYW A;  2XCR B;  3S14 K;  2JH3 A;  3A8K A;  1J6V A;  4A3I C;  2ZJQ S;  3EQL A;  4A3L C;  3GTO K;  4BXX C;  1O28 A;  4LJZ A;  4G0W A;  1WCM A;  1C0A A;  3AD7 C;  2YU9 K;  1TWC A;  1TWA A;  1Y1V K;  2ZUF A;  1I50 A;  3SZY A;  3HOU K;  3V4G A;  2R7Z A;  3HOW C;  4OIR A;  4A3J K;  4A3D K;  3GTJ A;  1EFW A;  4YFN A;  4M1X A;  1ZYR A;  3HOV K;  3FKI C;  2V6T A;  3L4K A;  4LK1 A;  2R92 A;  4KB2 A;  5C44 C;  3I4M K;  4KAR A;  1VRQ C;  5EGE A;  1SFO A;  4BY7 K;  5TMC A;  1PJ5 A;  3S1Q K;  3GIR A;  4BBS C;  4MEX A;  4YFK A;  1I3Q A;  4XSX A;  4GTC A;  4C3I K;  4P5B A;  4A3E K;  4GFQ A;  1TWC C;  1K83 K;  2B63 A;  1TWA C;  4JK1 A;  3RZO K;  1F9N A;  2R7Z C;  4FM9 A;  3AQP A;  5C4X C;  5C4J K;  3GTJ C;  1R9T K;  1HI9 A;  4KDD A;  1IW7 A;  1TWG A;  4WCE S;  2A68 A;  2R92 C;  3LAP A;  3HKZ D;  4WIL A;  3TFJ A;  5M5X K;  2GSO A;  3N0C A;  1L0W A;  5TMF A;  1USM A;  4QJV A;  1O2B A;  4A3K C;  1DD5 A;  5TJ3 A;  4IO9 S;  2PA8 D;  4GTL A;  3GTG K;  3HOX K;  4IOA S;  4G0V A;  2EBB A;  4KMU A;  1WOO A;  2XCO A;  2B63 C;  3GSI A;  4Y7N K;  2FQO A;  4KMD A;  3S0X A;  4P5A A;  5M5Y K;  1JQW A;  2VUM A;  3HKZ L;  3S1R K;  3ORE A;  5FLM C;  1TWH K;  1XXC A;  2L5N A;  3OPF A;  1TWG C;  5C3E C;  5D4D A;  4PAA A;  4J3N A;  1WQF A;  3HOZ K;  3GTL A;  3H0G K;  2A69 A;  2O5I A;  1IBA A;  2XCQ A;  2E2J C;  3A8J A;  1F7U A;  3PIP S;  1XZQ A;  4KAS A;  2NVX K;  4Q4Z A;  1G51 A;  4A3M C;  4A3F C;  3S1M C;  1KQ4 A;  1JVI A;  1GE9 A;  2NVY K;  4BLA A;  4C3H C;  3FOE A;  4A3B C;  3S2D C;  4OIN A;  2VUM C;  1USO A;  3GTM A;  1WOS A;  2Y3P A;  1WQH A;  4X6A K;  3CQZ A;  2GSN A;  4BLB A;  1WOP A;  3GTL C;  4KAT A;  1O2A A;  1EH1 A;  1XXA A;  3S16 K;  2L3U A;  3GTQ K;  2GSU A;  1V5V A;  3CAG A;  2JA5 A;  3DXJ A;  3FKI A;  3PO3 C;  4FZB A;  2ZFZ A;  3H3V D;  5IYC C;  4Y52 C;  4KMA A;  5IP7 C;  4WFA S;  1PJ6 A;  4Q5S A;  3N0B A;  2R93 C;  1WOR A; 
#chains in the Genus database with same CATH homology
 4BBS C;  3GTM C;  1WCM K;  4MEX A;  4BBR C;  4QJV B;  4YFK A;  3RZD K;  2NVQ K;  3S15 C;  4XSX A;  2JA8 C;  3M3Y C;  1I3Q C;  4C3J K;  3GTK C;  4OIP A;  4A93 C;  3S1N K;  4A3C K;  4C3I K;  5IP9 K;  4A3E K;  1Y1W C;  1TWC C;  2CW0 A;  3CQZ C;  3GTG C;  1I6H C;  1K83 K;  2O5J A;  3HOX C;  3GTL K;  1TWA C;  4ZH4 A;  4JK1 A;  3RZO K;  1I50 K;  4Y7N C;  1TWF C;  4LK0 A;  3HOW K;  2R7Z C;  2Y0S L;  4LLG A;  4C2M C;  4A3G C;  3GTP C;  5C4X C;  3H3V L;  5C4J K;  3GTJ C;  1R9T K;  3PO3 K;  2JA5 C;  2JA6 C;  3HOY C;  3FKI K;  3S1R C;  5IYB K;  1IW7 A;  4OIO A;  1TWH C;  3PO2 C;  2A6E A;  3S17 C;  2WAQ L;  2A68 A;  5C44 K;  2R92 C;  3K7A C;  2WB1 L;  5IYC K;  4KN7 A;  4Y52 K;  1I6V A;  3HKZ D;  3WOD A;  5IP7 K;  2E2H K;  3M4O K;  5M5X K;  1SFO K;  2WAQ D;  3HOZ C;  3S2H C;  2R93 K;  4BBS K;  3GTM K;  2PMZ L;  2PA8 L;  2WB1 D;  3H0G C;  5TMF A;  4QJV A;  4BBR K;  3S15 K;  4YG2 A;  2JA8 K;  3M3Y K;  1I3Q K;  3GTK K;  4A3K C;  4BY1 C;  2PPB A;  3S14 C;  1XPP A;  4A93 K;  2PMZ D;  1TWC K;  2PA8 D;  2NVX C;  3CQZ K;  1Y1W K;  1BDF A;  3GTG K;  1I6H K;  3HOX K;  2NVT C;  1TWA K;  4KMU A;  2B63 C;  4XLN A;  4Y7N K;  1TWF K;  2NVY C;  1YNN A;  5M5Y K;  2R7Z K;  3GTO C;  4C2M K;  4A3G K;  1YNJ A;  3GTP K;  5C4X K;  3GTJ K;  2JA5 K;  3I4N C;  4YFX A;  3HKZ L;  2JA6 K;  3HOY K;  3S1R K;  4AYB L;  5FLM C;  1SMY A;  1TWH K;  3PO2 K;  3S17 K;  1TWG C;  3K7A K;  5C3E C;  5IYD C;  5D4D A;  2JA7 C;  2R92 K;  2E2I C;  4X6A C;  4AYB D;  2YU9 C;  3HOZ K;  3S2H K;  3H0G K;  1Y1V C;  2A69 A;  2O5I A;  4OIQ A;  4A3K K;  4BY1 K;  2E2J C;  3S14 K;  3HOU C;  1HQM A;  4QIW D;  2NVX K;  3S16 C;  4A3J C;  3GTQ C;  2A6H A;  4A3D C;  4Q4Z A;  2NVT K;  4A3M C;  4KN4 A;  4A3F C;  4A3I C;  3EQL A;  3S1M C;  2B63 K;  4XSZ A;  4A3L C;  3HOV C;  2NVY K;  3GTO K;  4BXX C;  4C3H C;  3I4M C;  4A3B C;  2BE5 A;  3S2D C;  4LJZ A;  3I4N K;  4NOI A;  4MQ9 A;  4OIN A;  2VUM C;  4XLP A;  4BY7 C;  5FLM K;  3S1Q C;  1TWG K;  1WCM C;  5C3E K;  3RZD C;  2NVQ C;  5M3F K;  2E2I K;  2JA7 K;  4X6A K;  5IYD K;  4C3J C;  2YU9 K;  3S1N C;  4A3C C;  4C3I C;  4GZY A;  5IP9 C;  4A3E C;  4QIW L;  1Y1V K;  1K83 C;  3GTL C;  4G7Z A;  3RZO C;  1I50 C;  4MEY A;  2E2J K;  3HOU K;  5M3M K;  4G7O A;  3HOW C;  4OIR A;  3S16 K;  4A3J K;  3GTQ K;  4A3D K;  5M5W K;  4YFN A;  3DXJ A;  4A3F K;  4A3I K;  4A3M K;  3S1M K;  5C4J C;  1R9T C;  3PO3 C;  4A3L K;  1ZYR A;  3HOV K;  3FKI C;  5IYB C;  4LK1 A;  2Y0S D;  4C3H K;  4BXX K;  5C44 C;  3H3V D;  3I4M K;  4A3B K;  3S2D K;  5IYC C;  4Y52 C;  5FJ8 K;  2VUM K;  5IP7 C;  2E2H C;  3M4O C;  5TMC A;  1SFO C;  4BY7 K;  4Q5S A;  3S1Q K;  2R93 C;  4G7H A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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