3HOWC

Complete rna polymerase ii elongation complex iii with a t-u mismatch and a frayed rna 3'-uridine
Total Genus 49
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
49
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural basis of transcription: mismatch-specific fidelity mechanisms and paused RNA polymerase II with frayed RNA.
pubmed doi rcsb
molecule tags Transcription,transferase/dna/rna hybrid
molecule keywords DNA-directed RNA polymerase II subunit RPB1
total genus 49
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2009-06-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3howC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3howC01
4Y52K 3PO3C 2NVTK 5TMFA 2JA8C 5IYDC 3H3VD 2JA8K 3H3VL 2NVXC 1TWFK 4A3FK 1Y1VC 3GTJK 2A6EA 2PMZL 4OINA 3HOYK 5FLMC 4YFNA 2R7ZK 3RZDK 4OIOA 4C3IC 5C4JC 5IP7C 2PA8D 2R92K 4C2MC 2NVTC 5IP7K 1WCMK 4BY7C 4G7OA 4C2MK 1WCMC 2E2HK 3GTLC 3H0GK 5C4XC 4Q5SA 4A3CK 5C4XK 3GTJC 4G7HA 3S1MC 3GTGK 3HKZD 3CQZK 2R7ZC 1YNNA 4AYBL 4YFXA 3K7AK 4LJZA 3HOZK 3S14K 4JK1A 2WB1L 4XLNA 3PO2C 3HOVK 3S15K 3HOVC 3PO2K 4XSXA 1K83K 4QIWL 4A3LC 1YNJA 1K83C 2A69A 5IYCK 1I50C 3GTPC 4Y7NK 2JA7K 4A3LK 1Y1WC 5IP9C 4A3KK 4LK0A 2NVYK 3CQZC 1I3QK 2YU9K 3FKIC 4QIWD 4A3MC 3S1RC 1TWGC 3GTOC 4YFKA 1TWAK 3GTQK 2PPBA 4G7ZA 3GTOK 3RZOC 4A93K 3GTQC 5IYCC 4A3IC 4AYBD 3HOUC 5C3EK 4BY1K 3HKZL 3I4MK 3M4OK 4BXXK 5C44C 2BE5A 1I6HK 2Y0SD 4YG2A 1TWCC 4BBSC 1TWCK 1R9TK 4C3HC 1I6VA 4A3FC 4LLGA 4A3EK 3HOYC 4ZH4A 4KN4A 1ZYRA 3RZOK 3EQLA 3S2DK 5FLMK 2E2IC 2WB1D 4A3IK 3HOUK 2JA6C 4XSZA 3I4NK 5D4DA 4BXXC 2NVQK 5C44K 1TWHK 3HOXK 2R92C 5M5XK 2PMZD 5FJ8K 4BBRK 2JA5K 2VUMK 2E2HC 4OIRA 2JA5C 3S17K 3HOWK 4A3CC 1HQMA 2R93C 4KMUA 2PA8L 3HOWC 3RZDC 3S2DC 2JA6K 4OIPA 2WAQL 4X6AK 2WAQD 2NVQC 3GTKK 3HOXC 5TMCA 4Y52C 4BY7K 1BDFA 4A3BC 3S1NK 3GTKC 4A3GC 4OIQA 3S1NC 1XPPA 3GTMC 4A3BK 5IYDK 2JA7C 5M5WK 1TWFC 2NVXK 3GTMK 4QJVB 2Y0SL 4QJVA 3GTGC 2A6HA 4LK1A 1I3QC 2YU9C 3S1MK 4X6AC 2E2JC 2A68A 3S16C 3S15C 2O5JA 4C3IK 5C4JK 4C3JK 2E2JK 3S14C 3M3YK 3S16K 5IYBC 5M5YK 4C3JC 4A3GK 4Y7NC 5M3MK 5IYBK 3S2HK 3H0GC 3GTLK 3S2HC 2NVYC 4NOIA 3GTPK 3DXJA 4MEYA 4KN7A 4A3KC 5IP9K 3FKIK 1Y1WK 4MQ9A 3K7AC 3HOZC 4BBSK 1IW7A 1R9TC 3M3YC 4C3HK 1SFOC 4A3EC 4A3JK 2O5IA 1SFOK 5C3EC 4A3JC 1SMYA 1I50K 3S1QC 3I4MC 4MEXA 3M4OC 1I6HC 3PO3K 4BBRC 3WODA 4Q4ZA 4XLPA 4A3DC 5M3FK 2VUMC 4A3DK 4A3MK 3S1RK 3S17C 1TWGK 2R93K 2B63C 1Y1VK 1TWAC 2B63K 4A93C 2CW0A 3I4NC 1TWHC 4BY1C 2E2IK 3S1QK 4GZYA
chains in the Genus database with same CATH superfamily
1HI9A 3ADAC 3JSTA 1XXBA 3V4GA 2JA8K 2NVXC 3HOYK 3VA7A 1PJ7A 5CHPA 5FLMC 2NVXA 4P5AA 2PA8D 5HL7S 4C2MC 2NVTC 2R93A 3T00A 1F7UA 4G7HA 1EFWA 3K7AK 1XZPB 2ZUFA 1Y1WA 4U67S 1K83K 1V5VA 4A3LC 4LQYA 4Y7NK 3SZYA 3OREA 4A3KK 2B63A 4LK0A 2NVYK 3CQZC 2ZJQS 4QIWD 3GTOC 3PIPS 4YFKA 3AQOA 3QX3A 3GTQK 4G7ZA 2W7VA 5IYCC 3FKIA 3HOUC 3I4MK 4BY1K 3HKZL 3N3YA 3AD7C 1G51A 1EH1A 1O2AA 3GEIA 1VRQC 4C3HC 2V6SA 1ZYRA 4GTAA 2E2IC 2WB1D 3HOUK 4KM8A 2JA6C 5D4DA 3BP3A 2PMZD 4GTLA 4IOCS 2JA5K 2E2HC 4OIRA 1JOEA 3S17K 5JFEA 3HOWK 1BJTA 2WAQL 2JA5A 2WAQD 2NVQC 4Y52C 1BDFA 4A3BC 4OIQA 1XPPA 4KATA 1DCHA 1XXCA 3GTOA 2E2IA 1XXAA 4QJVA 4LK1A 2A68A 2FQOA 3Q3QA 3M3YK 5IYBC 5JVOA 1XZPA 4Y7NC 5M3MK 3GTLK 4KASA 3GTPK 1ZBSA 5IP9K 4MQ9A 1R9TC 4GT9A 4M1XA 1SFOC 4KM9A 4KB2A 2KWAA 3S0XA 4A3JC 1R9TA 1SMYA 3S1QC 5IOSA 4KMHA 3PO3K 4BBRC 3LAPA 4Q4ZA 4XLPA 1O25A 5M3FK 1J6VA 3S1RK 1TWGK 2R93K 4IO9S 1WOPA 1O24A 4ILDA 4LR2A 4A93C 2CW0A 3A8KA 3TFHA 2KXYA 1TWFA 3PO3C 3BUEA 1DCPA 1DCOA 4WJ4A 1SFOA 1B4BA 4J3NA 1TWFK 1Y1VC 1O27A 5IORA 2ZJRS 4YFNA 3RZDK 1J6XA 4OIOA 4C3IC 5IP7C 2GSOA 2R92K 4BKWA 1WCMK 4G7OA 1F9NA 3H0GK 5C4XC 3CAGA 3GTGK 3HKZD 2R92A 1WOOA 4JK1A 2VUMA 2WB1L 1J98A 4GTCA 1ZXOA 3TFIA 4XSXA 3PIOS 2GAGC 2V6UA 2A69A 3OEPA 3GTPC 1TWAA 5IP9C 1L0WA 2EBBA 1I3QK 2YU9K 1IBAA 3FKIC 4A3MC 1TWAK 3RZOC 2NVYA 4A3IC 2V6TA 5C3EK 3M4OK 5C44C 2BE5A 1I6HK 4BBSC 1TWCK 2CFAB 4A3FC 4KDDA 4A3EK 4ZH4A 3AH5A 3GTPA 3RZOK 4A3IK 3A8IA 1TWHK 3GSIA 1WQHA 4WF9S 5FJ8K 2JA5C 1USOA 4A3CC 3BP8C 5L46A 2PA8L 3RZDC 2JA6K 1FEUA 3GTKK 3CQZA 1TWGA 1RU0A 1Y1VA 4P9SA 4A3BK 5IYDK 1JVIA 3GTMK 1ZVUA 4QJVB 3S1MK 3GDZA 3S16C 5C4JK 5E68A 4C3JK 2E2JK 1VH2A 3NUHA 3S2HK 2NVYC 4KN7A 4WFAS 3FKIK 5IOTA 3HOZC 1WCMA 3M3YC 1BS2A 1SFOK 1I50K 1I6HC 4WCES 2XCRB 2GAHC 3TTGA 4G0WA 1K83A 2VUMC 4WFBS 2L3UA 2B63K 1TWHC 4BY1C 3AD8C 3S1QK 4AH6A 3L4KA 1WQGA 2JA8C 4P5BA 3H3VD 1C0AA 2GSUA 5EGEA 3GTJK 2PMZL 2R7ZK 4GTBA 4BY7C 3G4AA 4C2MK 1WCMC 3A8JA 4FZBA 2E2HK 1O2FB 3LAJA 4Q5SA 5C4XK 3GTJC 4AYBL 2RGRA 4LJZA 3PO2C 3HOVK 3S15K 5JVHS 1GE9A 1K83C 2JA7K 4GFQA 4BLBA 4A3LK 4C45A 3FOFA 1BGWA 3GTKA 2KQ1A 1JQWA 1YCLA 4XCHA 1TWGC 3FOEA 3GTOK 4A93K 3GTQC 4RMFA 3LYWA 1IL2A 2KPUA 4BXXK 1INNA 2ZJPS 4YG2A 4LLGA 3HOYC 4KN4A 4GTEA 3EQLA 3S2DK 5FLMK 1IE0A 3I4NK 4BXXC 5C44K 3HOXK 2R92C 5CJ9A 4BBRK 2L5NA 1USMA 4IOAS 1O29A 1WQFA 4KMUA 3HOWC 1O26A 1EK8A 1VGXA 1PJ6A 3GTLA 4OIPA 4X6AK 2FQTA 3HOXC 3OPFA 4LOWA 3S1NK 3GTKC 4A3GC 2XCOA 5M5WK 2NVXK 1IQ0A 1I50A 2A6HA 4X6AC 2O5JA 3S14C 1O2BA 3GTJA 5IYBK 5DM6S 3H0GC 1IS1A 3S2HC 1EQRA 1XZQB 4NOIA 3GTQA 2P8TA 3T01A 3L4JA 1Y1WK 3K7AC 4BBSK 3T02A 4C3HK 1XZQA 5TJ3A 4GTDA 5C3EC 4KMAA 1J6WA 4MEXA 4A3DC 1X31C 3G4CA 1TWHA 4A3MK 3S17C 4KB4A 3I4NC 3CF5S 1I3QA 2E2IK 4O2DA 2YU9A 1TWCA 4Y52K 1WSRA 2NVTK 5TMFA 5IYDC 3H3VL 4BLAA 2RH6A 4A3FK 3MMLB 2A6EA 4WILA 5DM7S 4OINA 1EI6A 2JA7A 1VLOA 5C4JC 3AQPA 1WSVA 1WORA 5IP7K 3GTLC 4A3CK 2JA6A 4KMDA 2GSNA 3S1MC 3CQZK 2R7ZC 1YNNA 1F7VA 4YFXA 3HOZK 3S14K 4XLNA 3GTMA 3HOVC 2PHCB 3PO2K 3GEEA 4QIWL 1YNJA 5IYCK 1I50C 3N0CA 1Y1WC 4KAWX 4GTFA 3S1RC 4PABA 2PPBA 4AYBD 3AD9C 2Y0SD 5IOQA 1TWCC 3TFJA 1R9TK 5EGHA 1I6VA 3H0GA 3GIRA 4XSZA 4DDQA 2NVQK 1DD5A 3GTGA 1B4AA 1WIHA 5M5XK 1YX2A 2VUMK 1HQMA 2R93C 2XCQA 4KC6A 3S2DC 3N0BA 3DLLS 2ZUEA 3GEHA 1KQ4A 3HXAA 5TMCA 4BY7K 3LPXA 3S1NC 3GTMC 3ERED 2JA7C 1TWFC 2Y0SL 1UV7A 1PJ5A 3SZZA 4FM9A 3GTGC 1I3QC 2YU9C 2E2JC 3S15C 4C3IK 3S16K 1F93A 5M5YK 4C3JC 4A3GK 2ZFZA 4G0VA 4WFNS 1ISEA 4KARA 5JVGS 2R7ZA 3FHZA 3DXJA 4MEYA 4A3KC 1WOSA 1IW7A 1VJEA 4A3EC 4A3JK 2O5IA 1ZQ1C 1O28A 4WJ3M 3I4MC 5HQHA 2JH3A 3M4OC 3IPJA 5HL8A 3WODA 1AB4A 4A3DK 2B63C 1Y1VK 2Y3PA 1TWAC 2E2HA 2CFAA 2P5MA 4PAAA 4G0UA 4GZYA 2D6FC
chains in the Genus database with same CATH topology
4Y52K 3PO3C 2NVTK 5TMFA 2JA8C 5IYDC 3H3VD 2JA8K 3H3VL 2NVXC 1TWFK 4A3FK 1Y1VC 3GTJK 2A6EA 2PMZL 4OINA 3HOYK 5FLMC 4YFNA 2R7ZK 3RZDK 4OIOA 4C3IC 5C4JC 5IP7C 2PA8D 2R92K 4C2MC 2NVTC 5IP7K 1WCMK 4BY7C 4G7OA 4C2MK 1WCMC 2E2HK 3GTLC 3H0GK 5C4XC 4Q5SA 4A3CK 5C4XK 3GTJC 4G7HA 3S1MC 3GTGK 3HKZD 3CQZK 2R7ZC 1YNNA 4AYBL 4YFXA 3K7AK 4LJZA 3HOZK 3S14K 4JK1A 2WB1L 4XLNA 3PO2C 3HOVK 3S15K 3HOVC 3PO2K 4XSXA 1K83K 4QIWL 4A3LC 1YNJA 1K83C 2A69A 5IYCK 1I50C 3GTPC 4Y7NK 2JA7K 4A3LK 1Y1WC 5IP9C 4A3KK 4LK0A 2NVYK 3CQZC 1I3QK 2YU9K 3FKIC 4QIWD 4A3MC 3S1RC 1TWGC 3GTOC 4YFKA 1TWAK 3GTQK 2PPBA 4G7ZA 3GTOK 3RZOC 4A93K 3GTQC 5IYCC 4A3IC 4AYBD 3HOUC 5C3EK 4BY1K 3HKZL 3I4MK 3M4OK 4BXXK 5C44C 2BE5A 1I6HK 2Y0SD 4YG2A 1TWCC 4BBSC 1TWCK 1R9TK 4C3HC 1I6VA 4A3FC 4LLGA 4A3EK 3HOYC 4ZH4A 4KN4A 1ZYRA 3RZOK 3EQLA 3S2DK 5FLMK 2E2IC 2WB1D 4A3IK 3HOUK 2JA6C 4XSZA 3I4NK 5D4DA 4BXXC 2NVQK 5C44K 1TWHK 3HOXK 2R92C 5M5XK 2PMZD 5FJ8K 4BBRK 2JA5K 2VUMK 2E2HC 4OIRA 2JA5C 3S17K 3HOWK 4A3CC 1HQMA 2R93C 4KMUA 2PA8L 3HOWC 3RZDC 3S2DC 2JA6K 4OIPA 2WAQL 4X6AK 2WAQD 2NVQC 3GTKK 3HOXC 5TMCA 4Y52C 4BY7K 1BDFA 4A3BC 3S1NK 3GTKC 4A3GC 4OIQA 3S1NC 1XPPA 3GTMC 4A3BK 5IYDK 2JA7C 5M5WK 1TWFC 2NVXK 3GTMK 4QJVB 2Y0SL 4QJVA 3GTGC 2A6HA 4LK1A 1I3QC 2YU9C 3S1MK 4X6AC 2E2JC 2A68A 3S16C 3S15C 2O5JA 4C3IK 5C4JK 4C3JK 2E2JK 3S14C 3M3YK 3S16K 5IYBC 5M5YK 4C3JC 4A3GK 4Y7NC 5M3MK 5IYBK 3S2HK 3H0GC 3GTLK 3S2HC 2NVYC 4NOIA 3GTPK 3DXJA 4MEYA 4KN7A 4A3KC 5IP9K 3FKIK 1Y1WK 4MQ9A 3K7AC 3HOZC 4BBSK 1IW7A 1R9TC 3M3YC 4C3HK 1SFOC 4A3EC 4A3JK 2O5IA 1SFOK 5C3EC 4A3JC 1SMYA 1I50K 3S1QC 3I4MC 4MEXA 3M4OC 1I6HC 3PO3K 4BBRC 3WODA 4Q4ZA 4XLPA 4A3DC 5M3FK 2VUMC 4A3DK 4A3MK 3S1RK 3S17C 1TWGK 2R93K 2B63C 1Y1VK 1TWAC 2B63K 4A93C 2CW0A 3I4NC 1TWHC 4BY1C 2E2IK 3S1QK 4GZYA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4Y52 K;  3PO3 C;  2NVT K;  5TMF A;  2JA8 C;  5IYD C;  3H3V D;  2JA8 K;  3H3V L;  2NVX C;  1TWF K;  4A3F K;  1Y1V C;  3GTJ K;  2A6E A;  2PMZ L;  4OIN A;  3HOY K;  5FLM C;  4YFN A;  2R7Z K;  3RZD K;  4OIO A;  4C3I C;  5C4J C;  5IP7 C;  2PA8 D;  2R92 K;  4C2M C;  2NVT C;  5IP7 K;  1WCM K;  4BY7 C;  4G7O A;  4C2M K;  1WCM C;  2E2H K;  3GTL C;  3H0G K;  5C4X C;  4Q5S A;  4A3C K;  5C4X K;  3GTJ C;  4G7H A;  3S1M C;  3GTG K;  3HKZ D;  3CQZ K;  2R7Z C;  1YNN A;  4AYB L;  4YFX A;  3K7A K;  4LJZ A;  3HOZ K;  3S14 K;  4JK1 A;  2WB1 L;  4XLN A;  3PO2 C;  3HOV K;  3S15 K;  3HOV C;  3PO2 K;  4XSX A;  1K83 K;  4QIW L;  4A3L C;  1YNJ A;  1K83 C;  2A69 A;  5IYC K;  1I50 C;  3GTP C;  4Y7N K;  2JA7 K;  4A3L K;  1Y1W C;  5IP9 C;  4A3K K;  4LK0 A;  2NVY K;  3CQZ C;  1I3Q K;  2YU9 K;  3FKI C;  4QIW D;  4A3M C;  3S1R C;  1TWG C;  3GTO C;  4YFK A;  1TWA K;  3GTQ K;  2PPB A;  4G7Z A;  3GTO K;  3RZO C;  4A93 K;  3GTQ C;  5IYC C;  4A3I C;  4AYB D;  3HOU C;  5C3E K;  4BY1 K;  3HKZ L;  3I4M K;  3M4O K;  4BXX K;  5C44 C;  2BE5 A;  1I6H K;  2Y0S D;  4YG2 A;  1TWC C;  4BBS C;  1TWC K;  1R9T K;  4C3H C;  1I6V A;  4A3F C;  4LLG A;  4A3E K;  3HOY C;  4ZH4 A;  4KN4 A;  1ZYR A;  3RZO K;  3EQL A;  3S2D K;  5FLM K;  2E2I C;  2WB1 D;  4A3I K;  3HOU K;  2JA6 C;  4XSZ A;  3I4N K;  5D4D A;  4BXX C;  2NVQ K;  5C44 K;  1TWH K;  3HOX K;  2R92 C;  5M5X K;  2PMZ D;  5FJ8 K;  4BBR K;  2JA5 K;  2VUM K;  2E2H C;  4OIR A;  2JA5 C;  3S17 K;  3HOW K;  4A3C C;  1HQM A;  2R93 C;  4KMU A;  2PA8 L;  3HOW C;  3RZD C;  3S2D C;  2JA6 K;  4OIP A;  2WAQ L;  4X6A K;  2WAQ D;  2NVQ C;  3GTK K;  3HOX C;  5TMC A;  4Y52 C;  4BY7 K;  1BDF A;  4A3B C;  3S1N K;  3GTK C;  4A3G C;  4OIQ A;  3S1N C;  1XPP A;  3GTM C;  4A3B K;  5IYD K;  2JA7 C;  5M5W K;  1TWF C;  2NVX K;  3GTM K;  4QJV B;  2Y0S L;  4QJV A;  3GTG C;  2A6H A;  4LK1 A;  1I3Q C;  2YU9 C;  3S1M K;  4X6A C;  2E2J C;  2A68 A;  3S16 C;  3S15 C;  2O5J A;  4C3I K;  5C4J K;  4C3J K;  2E2J K;  3S14 C;  3M3Y K;  3S16 K;  5IYB C;  5M5Y K;  4C3J C;  4A3G K;  4Y7N C;  5M3M K;  5IYB K;  3S2H K;  3H0G C;  3GTL K;  3S2H C;  2NVY C;  4NOI A;  3GTP K;  3DXJ A;  4MEY A;  4KN7 A;  4A3K C;  5IP9 K;  3FKI K;  1Y1W K;  4MQ9 A;  3K7A C;  3HOZ C;  4BBS K;  1IW7 A;  1R9T C;  3M3Y C;  4C3H K;  1SFO C;  4A3E C;  4A3J K;  2O5I A;  1SFO K;  5C3E C;  4A3J C;  1SMY A;  1I50 K;  3S1Q C;  3I4M C;  4MEX A;  3M4O C;  1I6H C;  3PO3 K;  4BBR C;  3WOD A;  4Q4Z A;  4XLP A;  4A3D C;  5M3F K;  2VUM C;  4A3D K;  4A3M K;  3S1R K;  3S17 C;  1TWG K;  2R93 K;  2B63 C;  1Y1V K;  1TWA C;  2B63 K;  4A93 C;  2CW0 A;  3I4N C;  1TWH C;  4BY1 C;  2E2I K;  3S1Q K;  4GZY A; 
#chains in the Genus database with same CATH topology
 1HI9 A;  3ADA C;  3JST A;  1XXB A;  3V4G A;  2JA8 K;  2NVX C;  3HOY K;  3VA7 A;  1PJ7 A;  5CHP A;  5FLM C;  2NVX A;  4P5A A;  2PA8 D;  5HL7 S;  4C2M C;  2NVT C;  2R93 A;  3T00 A;  1F7U A;  4G7H A;  1EFW A;  3K7A K;  1XZP B;  2ZUF A;  1Y1W A;  4U67 S;  1K83 K;  1V5V A;  4A3L C;  4LQY A;  4Y7N K;  3SZY A;  3ORE A;  4A3K K;  2B63 A;  4LK0 A;  2NVY K;  3CQZ C;  2ZJQ S;  4QIW D;  3GTO C;  3PIP S;  4YFK A;  3AQO A;  3QX3 A;  3GTQ K;  4G7Z A;  2W7V A;  5IYC C;  3FKI A;  3HOU C;  3I4M K;  4BY1 K;  3HKZ L;  3N3Y A;  3AD7 C;  1G51 A;  1EH1 A;  1O2A A;  3GEI A;  1VRQ C;  4C3H C;  2V6S A;  1ZYR A;  4GTA A;  2E2I C;  2WB1 D;  3HOU K;  4KM8 A;  2JA6 C;  5D4D A;  3BP3 A;  2PMZ D;  4GTL A;  4IOC S;  2JA5 K;  2E2H C;  4OIR A;  1JOE A;  3S17 K;  5JFE A;  3HOW K;  1BJT A;  2WAQ L;  2JA5 A;  2WAQ D;  2NVQ C;  4Y52 C;  1BDF A;  4A3B C;  4OIQ A;  1XPP A;  4KAT A;  1DCH A;  1XXC A;  3GTO A;  2E2I A;  1XXA A;  4QJV A;  4LK1 A;  2A68 A;  2FQO A;  3Q3Q A;  3M3Y K;  5IYB C;  5JVO A;  1XZP A;  4Y7N C;  5M3M K;  3GTL K;  4KAS A;  3GTP K;  1ZBS A;  5IP9 K;  4MQ9 A;  1R9T C;  4GT9 A;  4M1X A;  1SFO C;  4KM9 A;  4KB2 A;  2KWA A;  3S0X A;  4A3J C;  1R9T A;  1SMY A;  3S1Q C;  5IOS A;  4KMH A;  3PO3 K;  4BBR C;  3LAP A;  4Q4Z A;  4XLP A;  1O25 A;  5M3F K;  1J6V A;  3S1R K;  1TWG K;  2R93 K;  4IO9 S;  1WOP A;  1O24 A;  4ILD A;  4LR2 A;  4A93 C;  2CW0 A;  3A8K A;  3TFH A;  2KXY A;  1TWF A;  3PO3 C;  3BUE A;  1DCP A;  1DCO A;  4WJ4 A;  1SFO A;  1B4B A;  4J3N A;  1TWF K;  1Y1V C;  1O27 A;  5IOR A;  2ZJR S;  4YFN A;  3RZD K;  1J6X A;  4OIO A;  4C3I C;  5IP7 C;  2GSO A;  2R92 K;  4BKW A;  1WCM K;  4G7O A;  1F9N A;  3H0G K;  5C4X C;  3CAG A;  3GTG K;  3HKZ D;  2R92 A;  1WOO A;  4JK1 A;  2VUM A;  2WB1 L;  1J98 A;  4GTC A;  1ZXO A;  3TFI A;  4XSX A;  3PIO S;  2GAG C;  2V6U A;  2A69 A;  3OEP A;  3GTP C;  1TWA A;  5IP9 C;  1L0W A;  2EBB A;  1I3Q K;  2YU9 K;  1IBA A;  3FKI C;  4A3M C;  1TWA K;  3RZO C;  2NVY A;  4A3I C;  2V6T A;  5C3E K;  3M4O K;  5C44 C;  2BE5 A;  1I6H K;  4BBS C;  1TWC K;  2CFA B;  4A3F C;  4KDD A;  4A3E K;  4ZH4 A;  3AH5 A;  3GTP A;  3RZO K;  4A3I K;  3A8I A;  1TWH K;  3GSI A;  1WQH A;  4WF9 S;  5FJ8 K;  2JA5 C;  1USO A;  4A3C C;  3BP8 C;  5L46 A;  2PA8 L;  3RZD C;  2JA6 K;  1FEU A;  3GTK K;  3CQZ A;  1TWG A;  1RU0 A;  1Y1V A;  4P9S A;  4A3B K;  5IYD K;  1JVI A;  3GTM K;  1ZVU A;  4QJV B;  3S1M K;  3GDZ A;  3S16 C;  5C4J K;  5E68 A;  4C3J K;  2E2J K;  1VH2 A;  3NUH A;  3S2H K;  2NVY C;  4KN7 A;  4WFA S;  3FKI K;  5IOT A;  3HOZ C;  1WCM A;  3M3Y C;  1BS2 A;  1SFO K;  1I50 K;  1I6H C;  4WCE S;  2XCR B;  2GAH C;  3TTG A;  4G0W A;  1K83 A;  2VUM C;  4WFB S;  2L3U A;  2B63 K;  1TWH C;  4BY1 C;  3AD8 C;  3S1Q K;  4AH6 A;  3L4K A;  1WQG A;  2JA8 C;  4P5B A;  3H3V D;  1C0A A;  2GSU A;  5EGE A;  3GTJ K;  2PMZ L;  2R7Z K;  4GTB A;  4BY7 C;  3G4A A;  4C2M K;  1WCM C;  3A8J A;  4FZB A;  2E2H K;  1O2F B;  3LAJ A;  4Q5S A;  5C4X K;  3GTJ C;  4AYB L;  2RGR A;  4LJZ A;  3PO2 C;  3HOV K;  3S15 K;  5JVH S;  1GE9 A;  1K83 C;  2JA7 K;  4GFQ A;  4BLB A;  4A3L K;  4C45 A;  3FOF A;  1BGW A;  3GTK A;  2KQ1 A;  1JQW A;  1YCL A;  4XCH A;  1TWG C;  3FOE A;  3GTO K;  4A93 K;  3GTQ C;  4RMF A;  3LYW A;  1IL2 A;  2KPU A;  4BXX K;  1INN A;  2ZJP S;  4YG2 A;  4LLG A;  3HOY C;  4KN4 A;  4GTE A;  3EQL A;  3S2D K;  5FLM K;  1IE0 A;  3I4N K;  4BXX C;  5C44 K;  3HOX K;  2R92 C;  5CJ9 A;  4BBR K;  2L5N A;  1USM A;  4IOA S;  1O29 A;  1WQF A;  4KMU A;  3HOW C;  1O26 A;  1EK8 A;  1VGX A;  1PJ6 A;  3GTL A;  4OIP A;  4X6A K;  2FQT A;  3HOX C;  3OPF A;  4LOW A;  3S1N K;  3GTK C;  4A3G C;  2XCO A;  5M5W K;  2NVX K;  1IQ0 A;  1I50 A;  2A6H A;  4X6A C;  2O5J A;  3S14 C;  1O2B A;  3GTJ A;  5IYB K;  5DM6 S;  3H0G C;  1IS1 A;  3S2H C;  1EQR A;  1XZQ B;  4NOI A;  3GTQ A;  2P8T A;  3T01 A;  3L4J A;  1Y1W K;  3K7A C;  4BBS K;  3T02 A;  4C3H K;  1XZQ A;  5TJ3 A;  4GTD A;  5C3E C;  4KMA A;  1J6W A;  4MEX A;  4A3D C;  1X31 C;  3G4C A;  1TWH A;  4A3M K;  3S17 C;  4KB4 A;  3I4N C;  3CF5 S;  1I3Q A;  2E2I K;  4O2D A;  2YU9 A;  1TWC A;  4Y52 K;  1WSR A;  2NVT K;  5TMF A;  5IYD C;  3H3V L;  4BLA A;  2RH6 A;  4A3F K;  3MML B;  2A6E A;  4WIL A;  5DM7 S;  4OIN A;  1EI6 A;  2JA7 A;  1VLO A;  5C4J C;  3AQP A;  1WSV A;  1WOR A;  5IP7 K;  3GTL C;  4A3C K;  2JA6 A;  4KMD A;  2GSN A;  3S1M C;  3CQZ K;  2R7Z C;  1YNN A;  1F7V A;  4YFX A;  3HOZ K;  3S14 K;  4XLN A;  3GTM A;  3HOV C;  2PHC B;  3PO2 K;  3GEE A;  4QIW L;  1YNJ A;  5IYC K;  1I50 C;  3N0C A;  1Y1W C;  4KAW X;  4GTF A;  3S1R C;  4PAB A;  2PPB A;  4AYB D;  3AD9 C;  2Y0S D;  5IOQ A;  1TWC C;  3TFJ A;  1R9T K;  5EGH A;  1I6V A;  3H0G A;  3GIR A;  4XSZ A;  4DDQ A;  2NVQ K;  1DD5 A;  3GTG A;  1B4A A;  1WIH A;  5M5X K;  1YX2 A;  2VUM K;  1HQM A;  2R93 C;  2XCQ A;  4KC6 A;  3S2D C;  3N0B A;  3DLL S;  2ZUE A;  3GEH A;  1KQ4 A;  3HXA A;  5TMC A;  4BY7 K;  3LPX A;  3S1N C;  3GTM C;  3ERE D;  2JA7 C;  1TWF C;  2Y0S L;  1UV7 A;  1PJ5 A;  3SZZ A;  4FM9 A;  3GTG C;  1I3Q C;  2YU9 C;  2E2J C;  3S15 C;  4C3I K;  3S16 K;  1F93 A;  5M5Y K;  4C3J C;  4A3G K;  2ZFZ A;  4G0V A;  4WFN S;  1ISE A;  4KAR A;  5JVG S;  2R7Z A;  3FHZ A;  3DXJ A;  4MEY A;  4A3K C;  1WOS A;  1IW7 A;  1VJE A;  4A3E C;  4A3J K;  2O5I A;  1ZQ1 C;  1O28 A;  4WJ3 M;  3I4M C;  5HQH A;  2JH3 A;  3M4O C;  3IPJ A;  5HL8 A;  3WOD A;  1AB4 A;  4A3D K;  2B63 C;  1Y1V K;  2Y3P A;  1TWA C;  2E2H A;  2CFA A;  2P5M A;  4PAA A;  4G0U A;  4GZY A;  2D6F C; 
#chains in the Genus database with same CATH homology
 4Y52 K;  3PO3 C;  2NVT K;  5TMF A;  2JA8 C;  5IYD C;  3H3V D;  2JA8 K;  3H3V L;  2NVX C;  1TWF K;  4A3F K;  1Y1V C;  3GTJ K;  2A6E A;  2PMZ L;  4OIN A;  3HOY K;  5FLM C;  4YFN A;  2R7Z K;  3RZD K;  4OIO A;  4C3I C;  5C4J C;  5IP7 C;  2PA8 D;  2R92 K;  4C2M C;  2NVT C;  5IP7 K;  1WCM K;  4BY7 C;  4G7O A;  4C2M K;  1WCM C;  2E2H K;  3GTL C;  3H0G K;  5C4X C;  4Q5S A;  4A3C K;  5C4X K;  3GTJ C;  4G7H A;  3S1M C;  3GTG K;  3HKZ D;  3CQZ K;  2R7Z C;  1YNN A;  4AYB L;  4YFX A;  3K7A K;  4LJZ A;  3HOZ K;  3S14 K;  4JK1 A;  2WB1 L;  4XLN A;  3PO2 C;  3HOV K;  3S15 K;  3HOV C;  3PO2 K;  4XSX A;  1K83 K;  4QIW L;  4A3L C;  1YNJ A;  1K83 C;  2A69 A;  5IYC K;  1I50 C;  3GTP C;  4Y7N K;  2JA7 K;  4A3L K;  1Y1W C;  5IP9 C;  4A3K K;  4LK0 A;  2NVY K;  3CQZ C;  1I3Q K;  2YU9 K;  3FKI C;  4QIW D;  4A3M C;  3S1R C;  1TWG C;  3GTO C;  4YFK A;  1TWA K;  3GTQ K;  2PPB A;  4G7Z A;  3GTO K;  3RZO C;  4A93 K;  3GTQ C;  5IYC C;  4A3I C;  4AYB D;  3HOU C;  5C3E K;  4BY1 K;  3HKZ L;  3I4M K;  3M4O K;  4BXX K;  5C44 C;  2BE5 A;  1I6H K;  2Y0S D;  4YG2 A;  1TWC C;  4BBS C;  1TWC K;  1R9T K;  4C3H C;  1I6V A;  4A3F C;  4LLG A;  4A3E K;  3HOY C;  4ZH4 A;  4KN4 A;  1ZYR A;  3RZO K;  3EQL A;  3S2D K;  5FLM K;  2E2I C;  2WB1 D;  4A3I K;  3HOU K;  2JA6 C;  4XSZ A;  3I4N K;  5D4D A;  4BXX C;  2NVQ K;  5C44 K;  1TWH K;  3HOX K;  2R92 C;  5M5X K;  2PMZ D;  5FJ8 K;  4BBR K;  2JA5 K;  2VUM K;  2E2H C;  4OIR A;  2JA5 C;  3S17 K;  3HOW K;  4A3C C;  1HQM A;  2R93 C;  4KMU A;  2PA8 L;  3HOW C;  3RZD C;  3S2D C;  2JA6 K;  4OIP A;  2WAQ L;  4X6A K;  2WAQ D;  2NVQ C;  3GTK K;  3HOX C;  5TMC A;  4Y52 C;  4BY7 K;  1BDF A;  4A3B C;  3S1N K;  3GTK C;  4A3G C;  4OIQ A;  3S1N C;  1XPP A;  3GTM C;  4A3B K;  5IYD K;  2JA7 C;  5M5W K;  1TWF C;  2NVX K;  3GTM K;  4QJV B;  2Y0S L;  4QJV A;  3GTG C;  2A6H A;  4LK1 A;  1I3Q C;  2YU9 C;  3S1M K;  4X6A C;  2E2J C;  2A68 A;  3S16 C;  3S15 C;  2O5J A;  4C3I K;  5C4J K;  4C3J K;  2E2J K;  3S14 C;  3M3Y K;  3S16 K;  5IYB C;  5M5Y K;  4C3J C;  4A3G K;  4Y7N C;  5M3M K;  5IYB K;  3S2H K;  3H0G C;  3GTL K;  3S2H C;  2NVY C;  4NOI A;  3GTP K;  3DXJ A;  4MEY A;  4KN7 A;  4A3K C;  5IP9 K;  3FKI K;  1Y1W K;  4MQ9 A;  3K7A C;  3HOZ C;  4BBS K;  1IW7 A;  1R9T C;  3M3Y C;  4C3H K;  1SFO C;  4A3E C;  4A3J K;  2O5I A;  1SFO K;  5C3E C;  4A3J C;  1SMY A;  1I50 K;  3S1Q C;  3I4M C;  4MEX A;  3M4O C;  1I6H C;  3PO3 K;  4BBR C;  3WOD A;  4Q4Z A;  4XLP A;  4A3D C;  5M3F K;  2VUM C;  4A3D K;  4A3M K;  3S1R K;  3S17 C;  1TWG K;  2R93 K;  2B63 C;  1Y1V K;  1TWA C;  2B63 K;  4A93 C;  2CW0 A;  3I4N C;  1TWH C;  4BY1 C;  2E2I K;  3S1Q K;  4GZY A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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