3HOWC

Complete rna polymerase ii elongation complex iii with a t-u mismatch and a frayed rna 3'-uridine
Total Genus 49
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
49
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transcription,transferase/dna/rna hybrid
molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Structural basis of transcription: mismatch-specific fidelity mechanisms and paused RNA polymerase II with frayed RNA.
pubmed doi rcsb
total genus 49
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2009-06-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3howC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3howC01
2VUMC 3EQLA 4MEYA 4YFNA 4A93K 2PA8L 1I50C 3S1NK 1K83C 3PO3C 2R93C 2B63C 2JA5C 3GTLC 2JA8C 4Y7NC 4G7OA 5C4JK 4A3BK 4BY1K 2E2HK 4XSXA 1Y1WC 2NVYK 4Q5SA 4LLGA 4OIRA 1I3QK 3I4MK 4XLPA 5C3EK 4G7ZA 5D4DA 4JK1A 1Y1VK 4A3DK 1I6HK 2NVQC 1SMYA 4A3EC 4A3LC 5M5YK 3RZDK 4XSZA 3HOWK 4C2MK 4A3KK 5C4XC 4A3CC 3GTQK 4C3JK 4YFXA 3S14K 3HOUC 1TWHC 2WB1D 3FKIC 2A68A 4C3IC 1WCMK 5M3MK 4YG2A 3PO2K 1TWFK 5IP9C 4AYBL 3S1RK 3GTKC 5IYBC 3H0GK 4LK1A 3HOXC 4G7HA 3HOUK 3HKZL 3S16K 3S2DK 2WB1L 4BY7K 3CQZC 2JA7C 4BBRK 3K7AC 2VUMK 4YFKA 4MQ9A 2YU9C 4LJZA 1I50K 2BE5A 1K83K 3PO3K 2R93K 5TMFA 4A3MC 2B63K 3HOZC 2E2JC 1YNJA 2JA5K 5M5XK 3GTLK 4X6AC 2JA8K 4Y52C 4Y7NK 5M3FK 3S1QC 1TWAC 1Y1WK 5M5WK 1TWGC 4A3JC 4OINA 2E2JK 4KN4A 4LK0A 2R7ZC 3WODA 2R92C 2O5JA 3M3YC 1IW7A 3M4OC 2Y0SD 3RZOK 3S16C 3H3VD 3S15C 3I4NC 2NVQK 4A3EK 4A3LK 5IYCC 4NOIA 2A6EA 1R9TC 4GZYA 2E2IC 1SFOC 5C4XK 4C3HC 4A3CK 2PMZD 3GTGC 3S17C 1TWHK 3GTPC 1BDFA 3FKIK 2NVTC 4QJVB 1ZYRA 5C44C 4C3IK 3HOVC 4A3IC 1YNNA 4A3FC 3GTOC 4BXXC 3S2HC 5IP9K 2PMZL 3GTKK 5IYBK 5IP7C 3HOXK 4QIWD 5IYDC 1TWCC 4OIOA 4A3GC 3CQZK 2JA7K 3HOYC 3K7AK 5TMCA 2YU9K 4BBSC 2JA6C 5IYDK 1TWCK 2WAQD 4A3MK 3DXJA 3GTJC 2NVXC 3GTMC 3RZOC 3HOZK 4A93C 2PA8D 4X6AK 3S1NC 4KMUA 4Y52K 5FJ8K 1TWAK 3S1QK 1TWGK 4A3JK 2R92K 2R7ZK 2CW0A 3M3YK 5C4JC 4A3BC 3M4OK 4BY1C 2A69A 2E2HC 2NVYC 2Y0SL 3I4NK 1HQMA 3H3VL 3S15K 3I4MC 1I3QC 5IYCK 5C3EC 2O5IA 1Y1VC 1R9TK 4A3DC 1I6HC 2E2IK 1SFOK 3RZDC 5FLMC 4C3HK 3S1MK 4Q4ZA 3GTGK 2PPBA 3HOWC 3S17K 4C2MC 4A3KC 3GTPK 2NVTK 3GTQC 1I6VA 4ZH4A 5C44K 4C3JC 5FLMK 4A3IK 4A3FK 3S14C 3GTOK 3HOVK 3S2HK 4BXXK 5IP7K 4OIPA 1WCMC 3GTMK 4MEXA 4XLNA 4QIWL 3PO2C 4A3GK 4KN7A 4AYBD 3HOYK 1TWFC 3S1RC 3S1MC 3H0GC 3S2DC 3HKZD 4QJVA 2JA6K 2A6HA 1XPPA 4BBSK 4BY7C 4OIQA 2WAQL 4BBRC 3GTJK 2NVXK
chains in the Genus database with same CATH superfamily
1GE9A 4MEYA 1ZVUA 4A93K 2PA8L 1I50C 3S1NK 1K83C 3PO3C 2R93C 1R9TA 1WQHA 5EGHA 5HL8A 5DM7S 4J3NA 3GTGA 4WCES 3I4MK 1O29A 5C3EK 1PJ6A 3T00A 5JVOA 1O24A 3RZDK 1ZQ1C 1WOPA 3GSIA 3HOWK 4A3KK 1IL2A 4A3CC 3GTMA 4C3JK 4YFXA 3FKIC 1WCMK 2CFAA 5M3MK 4AYBL 3GTKC 5IYBC 3HOUK 4LK1A 3OREA 2ZJRS 3HKZL 4BY7K 2NVYA 3CQZC 3K7AC 4WJ3M 4GTAA 4LJZA 2BE5A 1Y1VA 3T02A 1F9NA 1C0AA 2KPUA 3VA7A 2JA5K 5M5XK 4X6AC 1VJEA 4P9SA 4Y52C 5IORA 4Y7NK 1G51A 1TWAC 1Y1WK 3NUHA 2E2JK 4LK0A 2R7ZC 1EI6A 3AQPA 3H3VD 3S15C 4KB4A 4A3EK 5IYCC 1USOA 1V5VA 2PHCB 2P8TA 2A6EA 2FQOA 2E2IC 4LOWA 1EQRA 3GTPC 1BDFA 3IPJA 3GTLA 3GTOC 5IP7C 4GTEA 4DDQA 1WOSA 4A3GC 2JA7K 3S0XA 5TMCA 2YU9K 4PABA 1J6WA 3GTJC 5JFEA 4A93C 3S1NC 1IQ0A 4KMUA 3G4CA 2FQTA 1O25A 1KQ4A 3PIPS 2A69A 1FEUA 1PJ7A 2W7VA 3H3VL 3I4MC 3A8JA 5C3EC 1EK8A 4KC6A 1YX2A 3RZDC 4C3HK 4Q4ZA 2PPBA 3HOWC 1B4BA 4A3KC 3GIRA 2XCRB 1XXAA 4C3JC 1XZQA 3S2HK 3BP3A 1WCMC 4MEXA 1J6VA 4KN7A 2R92A 5DM6S 3JSTA 1J6XA 2A6HA 1BJTA 4BY7C 4YFNA 1TWHA 2KWAA 1INNA 1SFOA 1PJ5A 4KDDA 2JA5C 4KASA 4Y7NC 1DCOA 2E2HK 4XSXA 1Y1WC 4LLGA 4P5AA 2V6UA 4A3EC 3LYWA 3BUEA 4WJ4A 2ZUFA 4WFBS 4GT9A 4AH6A 3GTQK 4KMHA 5TJ3A 4GTCA 4IO9S 4YG2A 2JH3A 3T01A 3S2DK 4G7HA 1WQGA 2JA7C 4G0WA 4BBRK 1I3QA 2VUMK 2YU9C 3ERED 2V6SA 1YNJA 1VGXA 4FM9A 1JQWA 4OINA 3WODA 1IW7A 2JA6A 2Y0SD 2NVQK 4A3LK 2NVXA 4NOIA 3H0GA 4KAWX 4C3HC 1XZPA 4PAAA 1I50A 1TWHK 1K83A 4QJVB 4C3IK 2ZJPS 1ZYRA 1IE0A 3S2HC 5IP9K 2PMZL 3HOXK 4KMAA 1TWCC 2ZUEA 1UV7A 1VLOA 1WOOA 2EBBA 5IYDK 4WFAS 4IOAS 1BGWA 1J98A 3V4GA 4A3JK 3CF5S 3FKIA 2Y0SL 2E2HC 3I4NK 3AD7C 4O2DA 3S16K 4FZBA 4IOCS 3GTKA 4GTFA 2O5IA 2CFAB 1R9TK 3SZYA 3CQZA 4G0VA 2B63A 3TFIA 3GTGK 3S17K 2NVTK 3GTQC 5FLMK 2V6TA 4A3IK 1XXCA 4BLBA 3OEPA 2R7ZA 3S2DC 1JVIA 2JA6K 1XPPA 4OIQA 1ISEA 3TFHA 4BBRC 3GTMK 2NVXK 2VUMC 2L5NA 2E2IA 1B4AA 3HXAA 4G7OA 3GTPA 4KM8A 2NVYK 4OIRA 3GEHA 1AB4A 3GTOA 4G7ZA 5D4DA 1WSVA 1VH2A 1Y1VK 2RH6A 4KARA 2NVQC 5M5YK 4A3LC 3N3YA 4C2MK 3GTJA 1TWGA 3S14K 3HOUC 1O26A 1WIHA 1TWHC 4C3IC 3LAPA 4GTBA 4P5BA 5IP9C 4GFQA 3S1RK 4KM9A 2KXYA 3HOXC 1DD5A 3ADAC 1HI9A 2WB1L 4WF9S 2ZFZA 3N0CA 4YFKA 4MQ9A 4LQYA 2B63K 2E2JC 2XCOA 3GTLK 2JA8K 5M3FK 3AH5A 5M5WK 4A3JC 2O5JA 2GSNA 4KATA 1WCMA 3FOFA 5HQHA 3TFJA 3S16C 3I4NC 1XXBA 1DCHA 3GEEA 1L0WA 1XZQB 1IS1A 1R9TC 5C4XK 2PMZD 3CAGA 1WQFA 3GTGC 3S17C 2NVTC 2D6FC 4A3IC 1BS2A 4OIOA 1Y1WA 3FOEA 3A8IA 2JA6C 3A8KA 4A3MK 3DXJA 3GTMC 2NVXC 2XCQA 3HOZK 3QX3A 3AQOA 4BKWA 4XCHA 5FJ8K 1EH1A 4KMDA 3S1QK 3L4JA 5L46A 1TWGK 1TWFA 2R92K 3AD9C 4G0UA 3M3YK 3M4OK 2NVYC 1HQMA 2GAGC 1Y1VC 2R93A 5EGEA 1SFOK 2JA7A 2P5MA 2GSOA 1DCPA 1O27A 2YU9A 3L4KA 4C2MC 4WILA 1ZXOA 3GEIA 5C44K 4LR2A 4ZH4A 3HOVK 4BXXK 4A3FK 3S14C 1VRQC 4OIPA 3TTGA 4WFNS 3HOYK 1USMA 3S1RC 3DLLS 3Q3QA 4BBSK 3GDZA 3RZOK 3EQLA 5CJ9A 4M1XA 2B63C 3GTLC 2JA8C 3OPFA 5C4JK 4A3BK 2KQ1A 4BY1K 5JVGS 4Q5SA 1I3QK 4XLPA 1XZPB 1TWCA 4JK1A 3LPXA 4A3DK 3N0BA 1I6HK 1SMYA 4XSZA 1O2BA 5C4XC 1TWAA 4GTDA 5HL7S 3LAJA 2Y3PA 2WB1D 2A68A 2RGRA 3PO2K 1JOEA 3SZZA 1TWFK 3S1MK 3H0GK 1F93A 2E2HA 1YCLA 1I50K 1K83K 3PO3K 2R93K 1WSRA 5TMFA 4A3MC 2ZJQS 3HOZC 4U67S 3S1QC 3FHZA 3GTQA 1TWGC 4ILDA 4KN4A 2R92C 1F7UA 3M3YC 3M4OC 1F7VA 3MMLB 4GZYA 1SFOC 4A3CK 4RMFA 2VUMA 4BLAA 5JVHS 3BP8C 1RU0A 3FKIK 5C44C 1O2AA 3HOVC 4BXXC 1YNNA 4A3FC 3GTKK 5IYBK 2GSUA 4QIWD 5IYDC 5IOSA 3CQZK 3PIOS 3HOYC 1IBAA 3K7AK 4BBSC 5CHPA 1TWCK 2WAQD 3RZOC 2PA8D 4X6AK 2L3UA 3G4AA 4Y52K 1TWAK 2R7ZK 2CW0A 5C4JC 4A3BC 5E68A 5IOQA 4BY1C 5IOTA 3S15K 1WORA 1I3QC 5IYCK 4KB2A 4A3DC 1I6HC 2E2IK 3AD8C 5FLMC 4C45A 2JA5A 1EFWA 2GAHC 3GTPK 1I6VA 3GTOK 1ZBSA 5IP7K 1O28A 4XLNA 4QIWL 3PO2C 4A3GK 4AYBD 1TWFC 3S1MC 3H0GC 3HKZD 4QJVA 4GTLA 1O2FB 2WAQL 1X31C 3GTJK
chains in the Genus database with same CATH topology
2VUMC 3EQLA 4MEYA 4YFNA 4A93K 2PA8L 1I50C 3S1NK 1K83C 3PO3C 2R93C 2B63C 2JA5C 3GTLC 2JA8C 4Y7NC 4G7OA 5C4JK 4A3BK 4BY1K 2E2HK 4XSXA 1Y1WC 2NVYK 4Q5SA 4LLGA 4OIRA 1I3QK 3I4MK 4XLPA 5C3EK 4G7ZA 5D4DA 4JK1A 1Y1VK 4A3DK 1I6HK 2NVQC 1SMYA 4A3EC 4A3LC 5M5YK 3RZDK 4XSZA 3HOWK 4C2MK 4A3KK 5C4XC 4A3CC 3GTQK 4C3JK 4YFXA 3S14K 3HOUC 1TWHC 2WB1D 3FKIC 2A68A 4C3IC 1WCMK 5M3MK 4YG2A 3PO2K 1TWFK 5IP9C 4AYBL 3S1RK 3GTKC 5IYBC 3H0GK 4LK1A 3HOXC 4G7HA 3HOUK 3HKZL 3S16K 3S2DK 2WB1L 4BY7K 3CQZC 2JA7C 4BBRK 3K7AC 2VUMK 4YFKA 4MQ9A 2YU9C 4LJZA 1I50K 2BE5A 1K83K 3PO3K 2R93K 5TMFA 4A3MC 2B63K 3HOZC 2E2JC 1YNJA 2JA5K 5M5XK 3GTLK 4X6AC 2JA8K 4Y52C 4Y7NK 5M3FK 3S1QC 1TWAC 1Y1WK 5M5WK 1TWGC 4A3JC 4OINA 2E2JK 4KN4A 4LK0A 2R7ZC 3WODA 2R92C 2O5JA 3M3YC 1IW7A 3M4OC 2Y0SD 3RZOK 3S16C 3H3VD 3S15C 3I4NC 2NVQK 4A3EK 4A3LK 5IYCC 4NOIA 2A6EA 1R9TC 4GZYA 2E2IC 1SFOC 5C4XK 4C3HC 4A3CK 2PMZD 3GTGC 3S17C 1TWHK 3GTPC 1BDFA 3FKIK 2NVTC 4QJVB 1ZYRA 5C44C 4C3IK 3HOVC 4A3IC 1YNNA 4A3FC 3GTOC 4BXXC 3S2HC 5IP9K 2PMZL 3GTKK 5IYBK 5IP7C 3HOXK 4QIWD 5IYDC 1TWCC 4OIOA 4A3GC 3CQZK 2JA7K 3HOYC 3K7AK 5TMCA 2YU9K 4BBSC 2JA6C 5IYDK 1TWCK 2WAQD 4A3MK 3DXJA 3GTJC 2NVXC 3GTMC 3RZOC 3HOZK 4A93C 2PA8D 4X6AK 3S1NC 4KMUA 4Y52K 5FJ8K 1TWAK 3S1QK 1TWGK 4A3JK 2R92K 2R7ZK 2CW0A 3M3YK 5C4JC 4A3BC 3M4OK 4BY1C 2A69A 2E2HC 2NVYC 2Y0SL 3I4NK 1HQMA 3H3VL 3S15K 3I4MC 1I3QC 5IYCK 5C3EC 2O5IA 1Y1VC 1R9TK 4A3DC 1I6HC 2E2IK 1SFOK 3RZDC 5FLMC 4C3HK 3S1MK 4Q4ZA 3GTGK 2PPBA 3HOWC 3S17K 4C2MC 4A3KC 3GTPK 2NVTK 3GTQC 1I6VA 4ZH4A 5C44K 4C3JC 5FLMK 4A3IK 4A3FK 3S14C 3GTOK 3HOVK 3S2HK 4BXXK 5IP7K 4OIPA 1WCMC 3GTMK 4MEXA 4XLNA 4QIWL 3PO2C 4A3GK 4KN7A 4AYBD 3HOYK 1TWFC 3S1RC 3S1MC 3H0GC 3S2DC 3HKZD 4QJVA 2JA6K 2A6HA 1XPPA 4BBSK 4BY7C 4OIQA 2WAQL 4BBRC 3GTJK 2NVXK
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2VUM C;  3EQL A;  4MEY A;  4YFN A;  4A93 K;  2PA8 L;  1I50 C;  3S1N K;  1K83 C;  3PO3 C;  2R93 C;  2B63 C;  2JA5 C;  3GTL C;  2JA8 C;  4Y7N C;  4G7O A;  5C4J K;  4A3B K;  4BY1 K;  2E2H K;  4XSX A;  1Y1W C;  2NVY K;  4Q5S A;  4LLG A;  4OIR A;  1I3Q K;  3I4M K;  4XLP A;  5C3E K;  4G7Z A;  5D4D A;  4JK1 A;  1Y1V K;  4A3D K;  1I6H K;  2NVQ C;  1SMY A;  4A3E C;  4A3L C;  5M5Y K;  3RZD K;  4XSZ A;  3HOW K;  4C2M K;  4A3K K;  5C4X C;  4A3C C;  3GTQ K;  4C3J K;  4YFX A;  3S14 K;  3HOU C;  1TWH C;  2WB1 D;  3FKI C;  2A68 A;  4C3I C;  1WCM K;  5M3M K;  4YG2 A;  3PO2 K;  1TWF K;  5IP9 C;  4AYB L;  3S1R K;  3GTK C;  5IYB C;  3H0G K;  4LK1 A;  3HOX C;  4G7H A;  3HOU K;  3HKZ L;  3S16 K;  3S2D K;  2WB1 L;  4BY7 K;  3CQZ C;  2JA7 C;  4BBR K;  3K7A C;  2VUM K;  4YFK A;  4MQ9 A;  2YU9 C;  4LJZ A;  1I50 K;  2BE5 A;  1K83 K;  3PO3 K;  2R93 K;  5TMF A;  4A3M C;  2B63 K;  3HOZ C;  2E2J C;  1YNJ A;  2JA5 K;  5M5X K;  3GTL K;  4X6A C;  2JA8 K;  4Y52 C;  4Y7N K;  5M3F K;  3S1Q C;  1TWA C;  1Y1W K;  5M5W K;  1TWG C;  4A3J C;  4OIN A;  2E2J K;  4KN4 A;  4LK0 A;  2R7Z C;  3WOD A;  2R92 C;  2O5J A;  3M3Y C;  1IW7 A;  3M4O C;  2Y0S D;  3RZO K;  3S16 C;  3H3V D;  3S15 C;  3I4N C;  2NVQ K;  4A3E K;  4A3L K;  5IYC C;  4NOI A;  2A6E A;  1R9T C;  4GZY A;  2E2I C;  1SFO C;  5C4X K;  4C3H C;  4A3C K;  2PMZ D;  3GTG C;  3S17 C;  1TWH K;  3GTP C;  1BDF A;  3FKI K;  2NVT C;  4QJV B;  1ZYR A;  5C44 C;  4C3I K;  3HOV C;  4A3I C;  1YNN A;  4A3F C;  3GTO C;  4BXX C;  3S2H C;  5IP9 K;  2PMZ L;  3GTK K;  5IYB K;  5IP7 C;  3HOX K;  4QIW D;  5IYD C;  1TWC C;  4OIO A;  4A3G C;  3CQZ K;  2JA7 K;  3HOY C;  3K7A K;  5TMC A;  2YU9 K;  4BBS C;  2JA6 C;  5IYD K;  1TWC K;  2WAQ D;  4A3M K;  3DXJ A;  3GTJ C;  2NVX C;  3GTM C;  3RZO C;  3HOZ K;  4A93 C;  2PA8 D;  4X6A K;  3S1N C;  4KMU A;  4Y52 K;  5FJ8 K;  1TWA K;  3S1Q K;  1TWG K;  4A3J K;  2R92 K;  2R7Z K;  2CW0 A;  3M3Y K;  5C4J C;  4A3B C;  3M4O K;  4BY1 C;  2A69 A;  2E2H C;  2NVY C;  2Y0S L;  3I4N K;  1HQM A;  3H3V L;  3S15 K;  3I4M C;  1I3Q C;  5IYC K;  5C3E C;  2O5I A;  1Y1V C;  1R9T K;  4A3D C;  1I6H C;  2E2I K;  1SFO K;  3RZD C;  5FLM C;  4C3H K;  3S1M K;  4Q4Z A;  3GTG K;  2PPB A;  3HOW C;  3S17 K;  4C2M C;  4A3K C;  3GTP K;  2NVT K;  3GTQ C;  1I6V A;  4ZH4 A;  5C44 K;  4C3J C;  5FLM K;  4A3I K;  4A3F K;  3S14 C;  3GTO K;  3HOV K;  3S2H K;  4BXX K;  5IP7 K;  4OIP A;  1WCM C;  3GTM K;  4MEX A;  4XLN A;  4QIW L;  3PO2 C;  4A3G K;  4KN7 A;  4AYB D;  3HOY K;  1TWF C;  3S1R C;  3S1M C;  3H0G C;  3S2D C;  3HKZ D;  4QJV A;  2JA6 K;  2A6H A;  1XPP A;  4BBS K;  4BY7 C;  4OIQ A;  2WAQ L;  4BBR C;  3GTJ K;  2NVX K; 
#chains in the Genus database with same CATH topology
 1GE9 A;  4MEY A;  1ZVU A;  4A93 K;  2PA8 L;  1I50 C;  3S1N K;  1K83 C;  3PO3 C;  2R93 C;  1R9T A;  1WQH A;  5EGH A;  5HL8 A;  5DM7 S;  4J3N A;  3GTG A;  4WCE S;  3I4M K;  1O29 A;  5C3E K;  1PJ6 A;  3T00 A;  5JVO A;  1O24 A;  3RZD K;  1ZQ1 C;  1WOP A;  3GSI A;  3HOW K;  4A3K K;  1IL2 A;  4A3C C;  3GTM A;  4C3J K;  4YFX A;  3FKI C;  1WCM K;  2CFA A;  5M3M K;  4AYB L;  3GTK C;  5IYB C;  3HOU K;  4LK1 A;  3ORE A;  2ZJR S;  3HKZ L;  4BY7 K;  2NVY A;  3CQZ C;  3K7A C;  4WJ3 M;  4GTA A;  4LJZ A;  2BE5 A;  1Y1V A;  3T02 A;  1F9N A;  1C0A A;  2KPU A;  3VA7 A;  2JA5 K;  5M5X K;  4X6A C;  1VJE A;  4P9S A;  4Y52 C;  5IOR A;  4Y7N K;  1G51 A;  1TWA C;  1Y1W K;  3NUH A;  2E2J K;  4LK0 A;  2R7Z C;  1EI6 A;  3AQP A;  3H3V D;  3S15 C;  4KB4 A;  4A3E K;  5IYC C;  1USO A;  1V5V A;  2PHC B;  2P8T A;  2A6E A;  2FQO A;  2E2I C;  4LOW A;  1EQR A;  3GTP C;  1BDF A;  3IPJ A;  3GTL A;  3GTO C;  5IP7 C;  4GTE A;  4DDQ A;  1WOS A;  4A3G C;  2JA7 K;  3S0X A;  5TMC A;  2YU9 K;  4PAB A;  1J6W A;  3GTJ C;  5JFE A;  4A93 C;  3S1N C;  1IQ0 A;  4KMU A;  3G4C A;  2FQT A;  1O25 A;  1KQ4 A;  3PIP S;  2A69 A;  1FEU A;  1PJ7 A;  2W7V A;  3H3V L;  3I4M C;  3A8J A;  5C3E C;  1EK8 A;  4KC6 A;  1YX2 A;  3RZD C;  4C3H K;  4Q4Z A;  2PPB A;  3HOW C;  1B4B A;  4A3K C;  3GIR A;  2XCR B;  1XXA A;  4C3J C;  1XZQ A;  3S2H K;  3BP3 A;  1WCM C;  4MEX A;  1J6V A;  4KN7 A;  2R92 A;  5DM6 S;  3JST A;  1J6X A;  2A6H A;  1BJT A;  4BY7 C;  4YFN A;  1TWH A;  2KWA A;  1INN A;  1SFO A;  1PJ5 A;  4KDD A;  2JA5 C;  4KAS A;  4Y7N C;  1DCO A;  2E2H K;  4XSX A;  1Y1W C;  4LLG A;  4P5A A;  2V6U A;  4A3E C;  3LYW A;  3BUE A;  4WJ4 A;  2ZUF A;  4WFB S;  4GT9 A;  4AH6 A;  3GTQ K;  4KMH A;  5TJ3 A;  4GTC A;  4IO9 S;  4YG2 A;  2JH3 A;  3T01 A;  3S2D K;  4G7H A;  1WQG A;  2JA7 C;  4G0W A;  4BBR K;  1I3Q A;  2VUM K;  2YU9 C;  3ERE D;  2V6S A;  1YNJ A;  1VGX A;  4FM9 A;  1JQW A;  4OIN A;  3WOD A;  1IW7 A;  2JA6 A;  2Y0S D;  2NVQ K;  4A3L K;  2NVX A;  4NOI A;  3H0G A;  4KAW X;  4C3H C;  1XZP A;  4PAA A;  1I50 A;  1TWH K;  1K83 A;  4QJV B;  4C3I K;  2ZJP S;  1ZYR A;  1IE0 A;  3S2H C;  5IP9 K;  2PMZ L;  3HOX K;  4KMA A;  1TWC C;  2ZUE A;  1UV7 A;  1VLO A;  1WOO A;  2EBB A;  5IYD K;  4WFA S;  4IOA S;  1BGW A;  1J98 A;  3V4G A;  4A3J K;  3CF5 S;  3FKI A;  2Y0S L;  2E2H C;  3I4N K;  3AD7 C;  4O2D A;  3S16 K;  4FZB A;  4IOC S;  3GTK A;  4GTF A;  2O5I A;  2CFA B;  1R9T K;  3SZY A;  3CQZ A;  4G0V A;  2B63 A;  3TFI A;  3GTG K;  3S17 K;  2NVT K;  3GTQ C;  5FLM K;  2V6T A;  4A3I K;  1XXC A;  4BLB A;  3OEP A;  2R7Z A;  3S2D C;  1JVI A;  2JA6 K;  1XPP A;  4OIQ A;  1ISE A;  3TFH A;  4BBR C;  3GTM K;  2NVX K;  2VUM C;  2L5N A;  2E2I A;  1B4A A;  3HXA A;  4G7O A;  3GTP A;  4KM8 A;  2NVY K;  4OIR A;  3GEH A;  1AB4 A;  3GTO A;  4G7Z A;  5D4D A;  1WSV A;  1VH2 A;  1Y1V K;  2RH6 A;  4KAR A;  2NVQ C;  5M5Y K;  4A3L C;  3N3Y A;  4C2M K;  3GTJ A;  1TWG A;  3S14 K;  3HOU C;  1O26 A;  1WIH A;  1TWH C;  4C3I C;  3LAP A;  4GTB A;  4P5B A;  5IP9 C;  4GFQ A;  3S1R K;  4KM9 A;  2KXY A;  3HOX C;  1DD5 A;  3ADA C;  1HI9 A;  2WB1 L;  4WF9 S;  2ZFZ A;  3N0C A;  4YFK A;  4MQ9 A;  4LQY A;  2B63 K;  2E2J C;  2XCO A;  3GTL K;  2JA8 K;  5M3F K;  3AH5 A;  5M5W K;  4A3J C;  2O5J A;  2GSN A;  4KAT A;  1WCM A;  3FOF A;  5HQH A;  3TFJ A;  3S16 C;  3I4N C;  1XXB A;  1DCH A;  3GEE A;  1L0W A;  1XZQ B;  1IS1 A;  1R9T C;  5C4X K;  2PMZ D;  3CAG A;  1WQF A;  3GTG C;  3S17 C;  2NVT C;  2D6F C;  4A3I C;  1BS2 A;  4OIO A;  1Y1W A;  3FOE A;  3A8I A;  2JA6 C;  3A8K A;  4A3M K;  3DXJ A;  3GTM C;  2NVX C;  2XCQ A;  3HOZ K;  3QX3 A;  3AQO A;  4BKW A;  4XCH A;  5FJ8 K;  1EH1 A;  4KMD A;  3S1Q K;  3L4J A;  5L46 A;  1TWG K;  1TWF A;  2R92 K;  3AD9 C;  4G0U A;  3M3Y K;  3M4O K;  2NVY C;  1HQM A;  2GAG C;  1Y1V C;  2R93 A;  5EGE A;  1SFO K;  2JA7 A;  2P5M A;  2GSO A;  1DCP A;  1O27 A;  2YU9 A;  3L4K A;  4C2M C;  4WIL A;  1ZXO A;  3GEI A;  5C44 K;  4LR2 A;  4ZH4 A;  3HOV K;  4BXX K;  4A3F K;  3S14 C;  1VRQ C;  4OIP A;  3TTG A;  4WFN S;  3HOY K;  1USM A;  3S1R C;  3DLL S;  3Q3Q A;  4BBS K;  3GDZ A;  3RZO K;  3EQL A;  5CJ9 A;  4M1X A;  2B63 C;  3GTL C;  2JA8 C;  3OPF A;  5C4J K;  4A3B K;  2KQ1 A;  4BY1 K;  5JVG S;  4Q5S A;  1I3Q K;  4XLP A;  1XZP B;  1TWC A;  4JK1 A;  3LPX A;  4A3D K;  3N0B A;  1I6H K;  1SMY A;  4XSZ A;  1O2B A;  5C4X C;  1TWA A;  4GTD A;  5HL7 S;  3LAJ A;  2Y3P A;  2WB1 D;  2A68 A;  2RGR A;  3PO2 K;  1JOE A;  3SZZ A;  1TWF K;  3S1M K;  3H0G K;  1F93 A;  2E2H A;  1YCL A;  1I50 K;  1K83 K;  3PO3 K;  2R93 K;  1WSR A;  5TMF A;  4A3M C;  2ZJQ S;  3HOZ C;  4U67 S;  3S1Q C;  3FHZ A;  3GTQ A;  1TWG C;  4ILD A;  4KN4 A;  2R92 C;  1F7U A;  3M3Y C;  3M4O C;  1F7V A;  3MML B;  4GZY A;  1SFO C;  4A3C K;  4RMF A;  2VUM A;  4BLA A;  5JVH S;  3BP8 C;  1RU0 A;  3FKI K;  5C44 C;  1O2A A;  3HOV C;  4BXX C;  1YNN A;  4A3F C;  3GTK K;  5IYB K;  2GSU A;  4QIW D;  5IYD C;  5IOS A;  3CQZ K;  3PIO S;  3HOY C;  1IBA A;  3K7A K;  4BBS C;  5CHP A;  1TWC K;  2WAQ D;  3RZO C;  2PA8 D;  4X6A K;  2L3U A;  3G4A A;  4Y52 K;  1TWA K;  2R7Z K;  2CW0 A;  5C4J C;  4A3B C;  5E68 A;  5IOQ A;  4BY1 C;  5IOT A;  3S15 K;  1WOR A;  1I3Q C;  5IYC K;  4KB2 A;  4A3D C;  1I6H C;  2E2I K;  3AD8 C;  5FLM C;  4C45 A;  2JA5 A;  1EFW A;  2GAH C;  3GTP K;  1I6V A;  3GTO K;  1ZBS A;  5IP7 K;  1O28 A;  4XLN A;  4QIW L;  3PO2 C;  4A3G K;  4AYB D;  1TWF C;  3S1M C;  3H0G C;  3HKZ D;  4QJV A;  4GTL A;  1O2F B;  2WAQ L;  1X31 C;  3GTJ K; 
#chains in the Genus database with same CATH homology
 2VUM C;  3EQL A;  4MEY A;  4YFN A;  4A93 K;  2PA8 L;  1I50 C;  3S1N K;  1K83 C;  3PO3 C;  2R93 C;  2B63 C;  2JA5 C;  3GTL C;  2JA8 C;  4Y7N C;  4G7O A;  5C4J K;  4A3B K;  4BY1 K;  2E2H K;  4XSX A;  1Y1W C;  2NVY K;  4Q5S A;  4LLG A;  4OIR A;  1I3Q K;  3I4M K;  4XLP A;  5C3E K;  4G7Z A;  5D4D A;  4JK1 A;  1Y1V K;  4A3D K;  1I6H K;  2NVQ C;  1SMY A;  4A3E C;  4A3L C;  5M5Y K;  3RZD K;  4XSZ A;  3HOW K;  4C2M K;  4A3K K;  5C4X C;  4A3C C;  3GTQ K;  4C3J K;  4YFX A;  3S14 K;  3HOU C;  1TWH C;  2WB1 D;  3FKI C;  2A68 A;  4C3I C;  1WCM K;  5M3M K;  4YG2 A;  3PO2 K;  1TWF K;  5IP9 C;  4AYB L;  3S1R K;  3GTK C;  5IYB C;  3H0G K;  4LK1 A;  3HOX C;  4G7H A;  3HOU K;  3HKZ L;  3S16 K;  3S2D K;  2WB1 L;  4BY7 K;  3CQZ C;  2JA7 C;  4BBR K;  3K7A C;  2VUM K;  4YFK A;  4MQ9 A;  2YU9 C;  4LJZ A;  1I50 K;  2BE5 A;  1K83 K;  3PO3 K;  2R93 K;  5TMF A;  4A3M C;  2B63 K;  3HOZ C;  2E2J C;  1YNJ A;  2JA5 K;  5M5X K;  3GTL K;  4X6A C;  2JA8 K;  4Y52 C;  4Y7N K;  5M3F K;  3S1Q C;  1TWA C;  1Y1W K;  5M5W K;  1TWG C;  4A3J C;  4OIN A;  2E2J K;  4KN4 A;  4LK0 A;  2R7Z C;  3WOD A;  2R92 C;  2O5J A;  3M3Y C;  1IW7 A;  3M4O C;  2Y0S D;  3RZO K;  3S16 C;  3H3V D;  3S15 C;  3I4N C;  2NVQ K;  4A3E K;  4A3L K;  5IYC C;  4NOI A;  2A6E A;  1R9T C;  4GZY A;  2E2I C;  1SFO C;  5C4X K;  4C3H C;  4A3C K;  2PMZ D;  3GTG C;  3S17 C;  1TWH K;  3GTP C;  1BDF A;  3FKI K;  2NVT C;  4QJV B;  1ZYR A;  5C44 C;  4C3I K;  3HOV C;  4A3I C;  1YNN A;  4A3F C;  3GTO C;  4BXX C;  3S2H C;  5IP9 K;  2PMZ L;  3GTK K;  5IYB K;  5IP7 C;  3HOX K;  4QIW D;  5IYD C;  1TWC C;  4OIO A;  4A3G C;  3CQZ K;  2JA7 K;  3HOY C;  3K7A K;  5TMC A;  2YU9 K;  4BBS C;  2JA6 C;  5IYD K;  1TWC K;  2WAQ D;  4A3M K;  3DXJ A;  3GTJ C;  2NVX C;  3GTM C;  3RZO C;  3HOZ K;  4A93 C;  2PA8 D;  4X6A K;  3S1N C;  4KMU A;  4Y52 K;  5FJ8 K;  1TWA K;  3S1Q K;  1TWG K;  4A3J K;  2R92 K;  2R7Z K;  2CW0 A;  3M3Y K;  5C4J C;  4A3B C;  3M4O K;  4BY1 C;  2A69 A;  2E2H C;  2NVY C;  2Y0S L;  3I4N K;  1HQM A;  3H3V L;  3S15 K;  3I4M C;  1I3Q C;  5IYC K;  5C3E C;  2O5I A;  1Y1V C;  1R9T K;  4A3D C;  1I6H C;  2E2I K;  1SFO K;  3RZD C;  5FLM C;  4C3H K;  3S1M K;  4Q4Z A;  3GTG K;  2PPB A;  3HOW C;  3S17 K;  4C2M C;  4A3K C;  3GTP K;  2NVT K;  3GTQ C;  1I6V A;  4ZH4 A;  5C44 K;  4C3J C;  5FLM K;  4A3I K;  4A3F K;  3S14 C;  3GTO K;  3HOV K;  3S2H K;  4BXX K;  5IP7 K;  4OIP A;  1WCM C;  3GTM K;  4MEX A;  4XLN A;  4QIW L;  3PO2 C;  4A3G K;  4KN7 A;  4AYB D;  3HOY K;  1TWF C;  3S1R C;  3S1M C;  3H0G C;  3S2D C;  3HKZ D;  4QJV A;  2JA6 K;  2A6H A;  1XPP A;  4BBS K;  4BY7 C;  4OIQ A;  2WAQ L;  4BBR C;  3GTJ K;  2NVX K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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