3HOWC

Complete rna polymerase ii elongation complex iii with a t-u mismatch and a frayed rna 3'-uridine
Total Genus 49
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
49
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural basis of transcription: mismatch-specific fidelity mechanisms and paused RNA polymerase II with frayed RNA.
pubmed doi rcsb
molecule tags Transcription,transferase/dna/rna hybrid
molecule keywords DNA-directed RNA polymerase II subunit RPB1
total genus 49
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2009-06-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3howC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3howC01
2JA8K 3CQZK 4A3LC 4A93K 2Y0SD 2NVXK 5IP9C 3RZDK 4A3LK 2JA5C 5C4JK 1TWFC 2E2HC 3RZDC 2WAQL 5IP9K 2PA8D 4YFNA 4QIWD 2E2HK 4LK1A 4C3JK 3HOVK 3HOWK 3GTQC 1I50C 1R9TC 2WB1L 4KMUA 5C4XC 4BY7K 2NVXC 3HOWC 3HOUK 5C44C 4BY7C 3GTQK 3S16K 4OIPA 2JA6C 1TWGK 5IYBC 3HOUC 4A3BC 2A6EA 1TWGC 2JA6K 4A3BK 4MEXA 5IYBK 2E2JC 3HOVC 2R92K 1I50K 4BBRK 5IP7K 1R9TK 3HKZL 4C3HC 5IYCC 4MQ9A 3S1NK 3GTLK 5FLMC 3S16C 5M5XK 2CW0A 3S15K 4BBSC 3EQLA 4A3EK 3K7AC 4C3IC 1I6VA 3H3VL 3S2HK 1TWAC 3I4NK 3S2HC 4NOIA 1TWHK 1XPPA 3HOZK 3M3YC 4A3IC 2PPBA 3M4OK 4A3CK 5FLMK 4C2MC 2R93K 4ZH4A 5M5YK 3S1QC 2R7ZK 4QJVA 4A3MC 1I3QC 3HOYK 4JK1A 4A3JC 3FKIC 2O5IA 3RZOC 3S2DC 3S14C 3H0GK 4AYBL 2B63K 4YFKA 3GTOK 3I4MC 2YU9C 1Y1WK 3PO3C 4A3DK 4LLGA 4GZYA 5C3EK 4A3FK 3S1MK 5IYDC 1WCMK 3GTJK 2NVQK 4QIWL 4LJZA 4OIQA 1SFOC 3GTJC 5TMFA 2PMZL 1YNNA 2A68A 4C2MK 4Y52C 4BXXK 4Q5SA 3HOXK 4KN4A 4X6AC 4Q4ZA 3GTKC 4KN7A 2VUMC 1TWFK 2NVTK 2JA5K 1SMYA 4A3KK 4Y7NK 5TMCA 3GTKK 3CQZC 4XLPA 3S17C 4Y7NC 4G7OA 3GTGK 3GTPK 2E2IC 3S1MC 3GTGC 3S17K 2O5JA 2E2IK 2NVYC 5M3MK 2A6HA 4G7HA 2NVTC 4YFXA 4BY1K 2VUMK 1HQMA 1YNJA 4A3KC 4A3GC 4BY1C 1Y1VK 4AYBD 4BXXC 2NVYK 1Y1VC 3S15C 1K83C 5M5WK 4A3GK 1I6HC 1BDFA 1TWCK 3M3YK 1K83K 5IYCK 4C3HK 5IP7C 4LK0A 1TWCC 3H3VD 2R92C 3PO2K 2E2JK 3HOYC 4C3JC 1I3QK 4A3EC 4OINA 3S1RK 2JA7K 4BBSK 2WB1D 3GTOC 1Y1WC 3I4MK 3I4NC 5C44K 4Y52K 4A3JK 3S2DK 4OIOA 1WCMC 2NVQC 3K7AK 5IYDK 4XLNA 4A3CC 3M4OC 4A3IK 3HKZD 1I6HK 3PO3K 2BE5A 1TWHC 4XSZA 4YG2A 5D4DA 3S1RC 2JA7C 3GTLC 3HOZC 1SFOK 2WAQD 3H0GC 4MEYA 4BBRC 4XSXA 3PO2C 3FKIK 5FJ8K 3RZOK 4C3IK 3S1NC 2A69A 3WODA 2R7ZC 1TWAK 4X6AK 2PMZD 4A93C 4A3MK 3DXJA 3S14K 1IW7A 2PA8L 4QJVB 3GTPC 2YU9K 1ZYRA 4A3DC 3GTMK 5C4JC 2Y0SL 5C3EC 4A3FC 5M3FK 3GTMC 2B63C 3HOXC 5C4XK 2R93C 2JA8C 3S1QK 4OIRA 4G7ZA
chains in the Genus database with same CATH superfamily
2JA8K 4A3LC 2ZJQS 1PJ6A 3CQZA 3Q3QA 1XXBA 1TWFC 2E2HC 1EQRA 3N3YA 5IP9K 2ZJPS 2L3UA 3TFJA 1WQGA 4WJ3M 2RH6A 3AQPA 1I50C 3IPJA 5C4XC 4BLBA 2NVXC 3HOWC 4KMDA 3CAGA 1ZQ1C 3TFIA 2E2JC 2KWAA 4BBRK 3FKIA 3L4JA 1JVIA 3S15K 3EQLA 1DCPA 1WSRA 3H3VL 3GTKA 1RU0A 1TWAC 1BGWA 3FHZA 3G4AA 3NUHA 3M3YC 3M4OK 4O2DA 1BJTA 5M5YK 2XCOA 1VJEA 1V5VA 3ADAC 4KM9A 4GTLA 4JK1A 2GAHC 3I4MC 3N0CA 3LPXA 4LLGA 4P5AA 4QIWL 4OIQA 1F93A 4FZBA 1ISEA 4Q5SA 1TWFK 4G0VA 2FQTA 1F9NA 3GTKK 1SFOA 1O28A 4XLPA 3S17C 4G7OA 3GTGK 4KMAA 2E2IK 5JVGS 1O2AA 2NVYA 2E2IA 3G4CA 1X31C 1G51A 4WFNS 4AYBD 1Y1VK 2CFAB 4DDQA 3LAJA 5IOQA 4C3HK 2R92C 2JA7K 3OREA 4KATA 5IOTA 2V6TA 4ILDA 1F7VA 5CJ9A 4OIOA 3CF5S 4WCES 2NVQC 4XLNA 5EGEA 3M4OC 3PO3K 5D4DA 1IE0A 2WAQD 4MEYA 4BKWA 4WFAS 3S1NC 4BLAA 1IQ0A 2P8TA 4QJVB 3GTMK 5C3EC 2JH3A 2E2HA 1YX2A 1F7UA 3S1QK 4OIRA 2GSUA 1L0WA 4GTFA 4KAWX 1TWGA 5TJ3A 2RGRA 3RZDC 4YFNA 4QIWD 2E2HK 4C3JK 1WIHA 4M1XA 3V4GA 4RMFA 4KMUA 5C44C 4BY7C 1JQWA 4G0UA 3GTQK 4OIPA 5IYBC 2A6EA 4LQYA 2R92K 1I50K 5IYCC 2R93A 2XCRB 5M5XK 2CW0A 1WQFA 3GEHA 4BBSC 5EGHA 4C3IC 3S2HK 2L5NA 4NOIA 1TWHK 3HOZK 1K83A 4A3CK 4IO9S 4ZH4A 4IOCS 1Y1VA 2JA7A 2B63K 1PJ7A 3FKIC 1WOPA 5IORA 2D6FC 1Y1WK 4A3DK 1ZVUA 4GZYA 5C3EK 5IYDC 1WCMK 4GTCA 3GTGA 1IBAA 4XCHA 5TMFA 3GDZA 2PMZL 2A68A 1I50A 4Y52C 4Q4ZA 3T02A 4KN7A 2VUMC 1SMYA 4A3KK 4Y7NK 2ZUFA 3CQZC 3GTPK 1DCHA 1WORA 3S0XA 4G7HA 2VUMK 1HQMA 1YNJA 4A3KC 4A3GC 1JOEA 5M5WK 3S15C 3A8JA 4KM8A 1K83K 4PAAA 4LK0A 3AH5A 3AD9C 4OINA 3S1RK 4BBSK 3GTOC 1O26A 4A3JK 3S2DK 3K7AK 5DM7S 4A3CC 3HKZD 1SFOK 1TWHC 3HOZC 2GSOA 2JA7C 1O27A 3SZZA 4BBRC 4XSXA 1EI6A 3GTQA 4A3MK 1TWAA 3TFHA 4KB2A 4A3DC 3BP8C 5C4JC 3DLLS 1BS2A 2R93C 2V6SA 2EBBA 4G7ZA 2B63A 3AQOA 5JVOA 2Y0SD 1ZXOA 5IP9C 4A3LK 4KASA 4PABA 2PA8D 5HL7S 3FOFA 2R92A 4LK1A 3HOVK 3HOWK 2WB1L 1R9TC 3HOUK 1VLOA 3S16K 1TWGC 2JA6K 1GE9A 4A3BK 5IYBK 4LOWA 4AH6A 3GTLK 3BP3A 3S16C 1J6WA 3T00A 2GAGC 3K7AC 1I6VA 4G0WA 3LAPA 1XPPA 4A3IC 3S1QC 4WF9S 3L4KA 4GTDA 4A3MC 1I3QC 2P5MA 3HOYK 3RZOC 3H0GK 4AYBL 4YFKA 2YU9C 2V6UA 3S1MK 3GTJK 2KQ1A 2JA6A 4WFBS 1YNNA 4KB4A 2CFAA 4X6AC 2NVTK 1TWFA 5TMCA 2Y3PA 1J98A 3GEEA 4Y7NC 2E2IC 3S1MC 3GTGC 1UV7A 3S17K 2O5JA 2NVYC 5M3MK 2A6HA 2NVTC 3VA7A 4FM9A 4BY1C 5CHPA 2W7VA 1O29A 1Y1VC 3A8KA 3GTOA 5E68A 3GTPA 1TWCK 3M3YK 1B4AA 5IYCK 3QX3A 5IP7C 1DCOA 1EH1A 1XZQB 2GSNA 3HXAA 3GTJA 4WILA 4U67S 3AD7C 3I4MK 1USOA 1WOSA 3I4NC 5C44K 3LYWA 4C45A 1WCMC 1INNA 5L46A 5IYDK 1WCMA 1EFWA 3GIRA 1KQ4A 4A3IK 4XSZA 3S1RC 3FKIK 1O2FB 3PO2C 5FJ8K 2A69A 2R7ZC 1TWAK 2PMZD 4A93C 3PIOS 2VUMA 1IW7A 4KARA 2YU9K 1ZYRA 2KPUA 5M3FK 4A3FC 3GTMC 3GTLA 1WQHA 4GTBA 2JA8C 5DM6S 1VH2A 3CQZK 4A93K 2NVXK 3RZDK 2JA5C 1HI9A 5C4JK 1WSVA 1XXAA 2WAQL 3AD8C 2XCQA 3TTGA 4IOAS 4GTAA 3GEIA 1PJ5A 3GTQC 4BY7K 3PIPS 5JVHS 4P9SA 1AB4A 2FQOA 2JA6C 1TWGK 3BUEA 3HOUC 2JA5A 4A3BC 1XXCA 4MEXA 1ZBSA 2YU9A 3HOVC 1TWHA 1R9TK 5IP7K 3HKZL 4C3HC 4MQ9A 1J6XA 3S1NK 5FLMC 1WOOA 4A3EK 1IL2A 3I4NK 3S2HC 4P5BA 2PPBA 1B4BA 5FLMK 4C2MC 3GSIA 2R93K 2R7ZA 4J3NA 1YCLA 2R7ZK 4QJVA 3H0GA 4A3JC 3S2DC 2O5IA 3S14C 3GTOK 1XZPB 3JSTA 3PO3C 2KXYA 1Y1WA 4A3FK 2NVQK 2ZUEA 1FEUA 3FOEA 4LJZA 1USMA 1IS1A 1SFOC 3GTJC 1VRQC 4KC6A 4GT9A 4C2MK 1R9TA 1O2BA 4BXXK 4KDDA 3HOXK 4KN4A 4Y52K 3GTKC 1VGXA 2JA5K 3A8IA 2ZJRS 5HL8A 3OEPA 4LR2A 5IOSA 1XZQA 4KMHA 1I3QA 4YFXA 4BY1K 3ERED 2PHCB 2NVYK 4BXXC 1O25A 1C0AA 1K83C 4A3GK 3N0BA 2NVXA 1I6HC 1BDFA 1TWCA 2ZFZA 1TWCC 3H3VD 1DD5A 1O24A 3PO2K 2E2JK 3HOYC 4C3JC 1I3QK 4A3EC 2WB1D 1Y1WC 1J6VA 4GFQA 5HQHA 4WJ4A 1I6HK 3OPFA 5JFEA 2BE5A 4YG2A 3GTLC 3GTMA 3H0GC 3RZOK 4C3IK 3MMLB 4X6AK 3WODA 3T01A 3DXJA 3S14K 1EK8A 2PA8L 3GTPC 4GTEA 2Y0SL 2B63C 3HOXC 5C4XK 3SZYA 1XZPA
chains in the Genus database with same CATH topology
2JA8K 3CQZK 4A3LC 4A93K 2Y0SD 2NVXK 5IP9C 3RZDK 4A3LK 2JA5C 5C4JK 1TWFC 2E2HC 3RZDC 2WAQL 5IP9K 2PA8D 4YFNA 4QIWD 2E2HK 4LK1A 4C3JK 3HOVK 3HOWK 3GTQC 1I50C 1R9TC 2WB1L 4KMUA 5C4XC 4BY7K 2NVXC 3HOWC 3HOUK 5C44C 4BY7C 3GTQK 3S16K 4OIPA 2JA6C 1TWGK 5IYBC 3HOUC 4A3BC 2A6EA 1TWGC 2JA6K 4A3BK 4MEXA 5IYBK 2E2JC 3HOVC 2R92K 1I50K 4BBRK 5IP7K 1R9TK 3HKZL 4C3HC 5IYCC 4MQ9A 3S1NK 3GTLK 5FLMC 3S16C 5M5XK 2CW0A 3S15K 4BBSC 3EQLA 4A3EK 3K7AC 4C3IC 1I6VA 3H3VL 3S2HK 1TWAC 3I4NK 3S2HC 4NOIA 1TWHK 1XPPA 3HOZK 3M3YC 4A3IC 2PPBA 3M4OK 4A3CK 5FLMK 4C2MC 2R93K 4ZH4A 5M5YK 3S1QC 2R7ZK 4QJVA 4A3MC 1I3QC 3HOYK 4JK1A 4A3JC 3FKIC 2O5IA 3RZOC 3S2DC 3S14C 3H0GK 4AYBL 2B63K 4YFKA 3GTOK 3I4MC 2YU9C 1Y1WK 3PO3C 4A3DK 4LLGA 4GZYA 5C3EK 4A3FK 3S1MK 5IYDC 1WCMK 3GTJK 2NVQK 4QIWL 4LJZA 4OIQA 1SFOC 3GTJC 5TMFA 2PMZL 1YNNA 2A68A 4C2MK 4Y52C 4BXXK 4Q5SA 3HOXK 4KN4A 4X6AC 4Q4ZA 3GTKC 4KN7A 2VUMC 1TWFK 2NVTK 2JA5K 1SMYA 4A3KK 4Y7NK 5TMCA 3GTKK 3CQZC 4XLPA 3S17C 4Y7NC 4G7OA 3GTGK 3GTPK 2E2IC 3S1MC 3GTGC 3S17K 2O5JA 2E2IK 2NVYC 5M3MK 2A6HA 4G7HA 2NVTC 4YFXA 4BY1K 2VUMK 1HQMA 1YNJA 4A3KC 4A3GC 4BY1C 1Y1VK 4AYBD 4BXXC 2NVYK 1Y1VC 3S15C 1K83C 5M5WK 4A3GK 1I6HC 1BDFA 1TWCK 3M3YK 1K83K 5IYCK 4C3HK 5IP7C 4LK0A 1TWCC 3H3VD 2R92C 3PO2K 2E2JK 3HOYC 4C3JC 1I3QK 4A3EC 4OINA 3S1RK 2JA7K 4BBSK 2WB1D 3GTOC 1Y1WC 3I4MK 3I4NC 5C44K 4Y52K 4A3JK 3S2DK 4OIOA 1WCMC 2NVQC 3K7AK 5IYDK 4XLNA 4A3CC 3M4OC 4A3IK 3HKZD 1I6HK 3PO3K 2BE5A 1TWHC 4XSZA 4YG2A 5D4DA 3S1RC 2JA7C 3GTLC 3HOZC 1SFOK 2WAQD 3H0GC 4MEYA 4BBRC 4XSXA 3PO2C 3FKIK 5FJ8K 3RZOK 4C3IK 3S1NC 2A69A 3WODA 2R7ZC 1TWAK 4X6AK 2PMZD 4A93C 4A3MK 3DXJA 3S14K 1IW7A 2PA8L 4QJVB 3GTPC 2YU9K 1ZYRA 4A3DC 3GTMK 5C4JC 2Y0SL 5C3EC 4A3FC 5M3FK 3GTMC 2B63C 3HOXC 5C4XK 2R93C 2JA8C 3S1QK 4OIRA 4G7ZA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2JA8 K;  3CQZ K;  4A3L C;  4A93 K;  2Y0S D;  2NVX K;  5IP9 C;  3RZD K;  4A3L K;  2JA5 C;  5C4J K;  1TWF C;  2E2H C;  3RZD C;  2WAQ L;  5IP9 K;  2PA8 D;  4YFN A;  4QIW D;  2E2H K;  4LK1 A;  4C3J K;  3HOV K;  3HOW K;  3GTQ C;  1I50 C;  1R9T C;  2WB1 L;  4KMU A;  5C4X C;  4BY7 K;  2NVX C;  3HOW C;  3HOU K;  5C44 C;  4BY7 C;  3GTQ K;  3S16 K;  4OIP A;  2JA6 C;  1TWG K;  5IYB C;  3HOU C;  4A3B C;  2A6E A;  1TWG C;  2JA6 K;  4A3B K;  4MEX A;  5IYB K;  2E2J C;  3HOV C;  2R92 K;  1I50 K;  4BBR K;  5IP7 K;  1R9T K;  3HKZ L;  4C3H C;  5IYC C;  4MQ9 A;  3S1N K;  3GTL K;  5FLM C;  3S16 C;  5M5X K;  2CW0 A;  3S15 K;  4BBS C;  3EQL A;  4A3E K;  3K7A C;  4C3I C;  1I6V A;  3H3V L;  3S2H K;  1TWA C;  3I4N K;  3S2H C;  4NOI A;  1TWH K;  1XPP A;  3HOZ K;  3M3Y C;  4A3I C;  2PPB A;  3M4O K;  4A3C K;  5FLM K;  4C2M C;  2R93 K;  4ZH4 A;  5M5Y K;  3S1Q C;  2R7Z K;  4QJV A;  4A3M C;  1I3Q C;  3HOY K;  4JK1 A;  4A3J C;  3FKI C;  2O5I A;  3RZO C;  3S2D C;  3S14 C;  3H0G K;  4AYB L;  2B63 K;  4YFK A;  3GTO K;  3I4M C;  2YU9 C;  1Y1W K;  3PO3 C;  4A3D K;  4LLG A;  4GZY A;  5C3E K;  4A3F K;  3S1M K;  5IYD C;  1WCM K;  3GTJ K;  2NVQ K;  4QIW L;  4LJZ A;  4OIQ A;  1SFO C;  3GTJ C;  5TMF A;  2PMZ L;  1YNN A;  2A68 A;  4C2M K;  4Y52 C;  4BXX K;  4Q5S A;  3HOX K;  4KN4 A;  4X6A C;  4Q4Z A;  3GTK C;  4KN7 A;  2VUM C;  1TWF K;  2NVT K;  2JA5 K;  1SMY A;  4A3K K;  4Y7N K;  5TMC A;  3GTK K;  3CQZ C;  4XLP A;  3S17 C;  4Y7N C;  4G7O A;  3GTG K;  3GTP K;  2E2I C;  3S1M C;  3GTG C;  3S17 K;  2O5J A;  2E2I K;  2NVY C;  5M3M K;  2A6H A;  4G7H A;  2NVT C;  4YFX A;  4BY1 K;  2VUM K;  1HQM A;  1YNJ A;  4A3K C;  4A3G C;  4BY1 C;  1Y1V K;  4AYB D;  4BXX C;  2NVY K;  1Y1V C;  3S15 C;  1K83 C;  5M5W K;  4A3G K;  1I6H C;  1BDF A;  1TWC K;  3M3Y K;  1K83 K;  5IYC K;  4C3H K;  5IP7 C;  4LK0 A;  1TWC C;  3H3V D;  2R92 C;  3PO2 K;  2E2J K;  3HOY C;  4C3J C;  1I3Q K;  4A3E C;  4OIN A;  3S1R K;  2JA7 K;  4BBS K;  2WB1 D;  3GTO C;  1Y1W C;  3I4M K;  3I4N C;  5C44 K;  4Y52 K;  4A3J K;  3S2D K;  4OIO A;  1WCM C;  2NVQ C;  3K7A K;  5IYD K;  4XLN A;  4A3C C;  3M4O C;  4A3I K;  3HKZ D;  1I6H K;  3PO3 K;  2BE5 A;  1TWH C;  4XSZ A;  4YG2 A;  5D4D A;  3S1R C;  2JA7 C;  3GTL C;  3HOZ C;  1SFO K;  2WAQ D;  3H0G C;  4MEY A;  4BBR C;  4XSX A;  3PO2 C;  3FKI K;  5FJ8 K;  3RZO K;  4C3I K;  3S1N C;  2A69 A;  3WOD A;  2R7Z C;  1TWA K;  4X6A K;  2PMZ D;  4A93 C;  4A3M K;  3DXJ A;  3S14 K;  1IW7 A;  2PA8 L;  4QJV B;  3GTP C;  2YU9 K;  1ZYR A;  4A3D C;  3GTM K;  5C4J C;  2Y0S L;  5C3E C;  4A3F C;  5M3F K;  3GTM C;  2B63 C;  3HOX C;  5C4X K;  2R93 C;  2JA8 C;  3S1Q K;  4OIR A;  4G7Z A; 
#chains in the Genus database with same CATH topology
 2JA8 K;  4A3L C;  2ZJQ S;  1PJ6 A;  3CQZ A;  3Q3Q A;  1XXB A;  1TWF C;  2E2H C;  1EQR A;  3N3Y A;  5IP9 K;  2ZJP S;  2L3U A;  3TFJ A;  1WQG A;  4WJ3 M;  2RH6 A;  3AQP A;  1I50 C;  3IPJ A;  5C4X C;  4BLB A;  2NVX C;  3HOW C;  4KMD A;  3CAG A;  1ZQ1 C;  3TFI A;  2E2J C;  2KWA A;  4BBR K;  3FKI A;  3L4J A;  1JVI A;  3S15 K;  3EQL A;  1DCP A;  1WSR A;  3H3V L;  3GTK A;  1RU0 A;  1TWA C;  1BGW A;  3FHZ A;  3G4A A;  3NUH A;  3M3Y C;  3M4O K;  4O2D A;  1BJT A;  5M5Y K;  2XCO A;  1VJE A;  1V5V A;  3ADA C;  4KM9 A;  4GTL A;  4JK1 A;  2GAH C;  3I4M C;  3N0C A;  3LPX A;  4LLG A;  4P5A A;  4QIW L;  4OIQ A;  1F93 A;  4FZB A;  1ISE A;  4Q5S A;  1TWF K;  4G0V A;  2FQT A;  1F9N A;  3GTK K;  1SFO A;  1O28 A;  4XLP A;  3S17 C;  4G7O A;  3GTG K;  4KMA A;  2E2I K;  5JVG S;  1O2A A;  2NVY A;  2E2I A;  3G4C A;  1X31 C;  1G51 A;  4WFN S;  4AYB D;  1Y1V K;  2CFA B;  4DDQ A;  3LAJ A;  5IOQ A;  4C3H K;  2R92 C;  2JA7 K;  3ORE A;  4KAT A;  5IOT A;  2V6T A;  4ILD A;  1F7V A;  5CJ9 A;  4OIO A;  3CF5 S;  4WCE S;  2NVQ C;  4XLN A;  5EGE A;  3M4O C;  3PO3 K;  5D4D A;  1IE0 A;  2WAQ D;  4MEY A;  4BKW A;  4WFA S;  3S1N C;  4BLA A;  1IQ0 A;  2P8T A;  4QJV B;  3GTM K;  5C3E C;  2JH3 A;  2E2H A;  1YX2 A;  1F7U A;  3S1Q K;  4OIR A;  2GSU A;  1L0W A;  4GTF A;  4KAW X;  1TWG A;  5TJ3 A;  2RGR A;  3RZD C;  4YFN A;  4QIW D;  2E2H K;  4C3J K;  1WIH A;  4M1X A;  3V4G A;  4RMF A;  4KMU A;  5C44 C;  4BY7 C;  1JQW A;  4G0U A;  3GTQ K;  4OIP A;  5IYB C;  2A6E A;  4LQY A;  2R92 K;  1I50 K;  5IYC C;  2R93 A;  2XCR B;  5M5X K;  2CW0 A;  1WQF A;  3GEH A;  4BBS C;  5EGH A;  4C3I C;  3S2H K;  2L5N A;  4NOI A;  1TWH K;  3HOZ K;  1K83 A;  4A3C K;  4IO9 S;  4ZH4 A;  4IOC S;  1Y1V A;  2JA7 A;  2B63 K;  1PJ7 A;  3FKI C;  1WOP A;  5IOR A;  2D6F C;  1Y1W K;  4A3D K;  1ZVU A;  4GZY A;  5C3E K;  5IYD C;  1WCM K;  4GTC A;  3GTG A;  1IBA A;  4XCH A;  5TMF A;  3GDZ A;  2PMZ L;  2A68 A;  1I50 A;  4Y52 C;  4Q4Z A;  3T02 A;  4KN7 A;  2VUM C;  1SMY A;  4A3K K;  4Y7N K;  2ZUF A;  3CQZ C;  3GTP K;  1DCH A;  1WOR A;  3S0X A;  4G7H A;  2VUM K;  1HQM A;  1YNJ A;  4A3K C;  4A3G C;  1JOE A;  5M5W K;  3S15 C;  3A8J A;  4KM8 A;  1K83 K;  4PAA A;  4LK0 A;  3AH5 A;  3AD9 C;  4OIN A;  3S1R K;  4BBS K;  3GTO C;  1O26 A;  4A3J K;  3S2D K;  3K7A K;  5DM7 S;  4A3C C;  3HKZ D;  1SFO K;  1TWH C;  3HOZ C;  2GSO A;  2JA7 C;  1O27 A;  3SZZ A;  4BBR C;  4XSX A;  1EI6 A;  3GTQ A;  4A3M K;  1TWA A;  3TFH A;  4KB2 A;  4A3D C;  3BP8 C;  5C4J C;  3DLL S;  1BS2 A;  2R93 C;  2V6S A;  2EBB A;  4G7Z A;  2B63 A;  3AQO A;  5JVO A;  2Y0S D;  1ZXO A;  5IP9 C;  4A3L K;  4KAS A;  4PAB A;  2PA8 D;  5HL7 S;  3FOF A;  2R92 A;  4LK1 A;  3HOV K;  3HOW K;  2WB1 L;  1R9T C;  3HOU K;  1VLO A;  3S16 K;  1TWG C;  2JA6 K;  1GE9 A;  4A3B K;  5IYB K;  4LOW A;  4AH6 A;  3GTL K;  3BP3 A;  3S16 C;  1J6W A;  3T00 A;  2GAG C;  3K7A C;  1I6V A;  4G0W A;  3LAP A;  1XPP A;  4A3I C;  3S1Q C;  4WF9 S;  3L4K A;  4GTD A;  4A3M C;  1I3Q C;  2P5M A;  3HOY K;  3RZO C;  3H0G K;  4AYB L;  4YFK A;  2YU9 C;  2V6U A;  3S1M K;  3GTJ K;  2KQ1 A;  2JA6 A;  4WFB S;  1YNN A;  4KB4 A;  2CFA A;  4X6A C;  2NVT K;  1TWF A;  5TMC A;  2Y3P A;  1J98 A;  3GEE A;  4Y7N C;  2E2I C;  3S1M C;  3GTG C;  1UV7 A;  3S17 K;  2O5J A;  2NVY C;  5M3M K;  2A6H A;  2NVT C;  3VA7 A;  4FM9 A;  4BY1 C;  5CHP A;  2W7V A;  1O29 A;  1Y1V C;  3A8K A;  3GTO A;  5E68 A;  3GTP A;  1TWC K;  3M3Y K;  1B4A A;  5IYC K;  3QX3 A;  5IP7 C;  1DCO A;  1EH1 A;  1XZQ B;  2GSN A;  3HXA A;  3GTJ A;  4WIL A;  4U67 S;  3AD7 C;  3I4M K;  1USO A;  1WOS A;  3I4N C;  5C44 K;  3LYW A;  4C45 A;  1WCM C;  1INN A;  5L46 A;  5IYD K;  1WCM A;  1EFW A;  3GIR A;  1KQ4 A;  4A3I K;  4XSZ A;  3S1R C;  3FKI K;  1O2F B;  3PO2 C;  5FJ8 K;  2A69 A;  2R7Z C;  1TWA K;  2PMZ D;  4A93 C;  3PIO S;  2VUM A;  1IW7 A;  4KAR A;  2YU9 K;  1ZYR A;  2KPU A;  5M3F K;  4A3F C;  3GTM C;  3GTL A;  1WQH A;  4GTB A;  2JA8 C;  5DM6 S;  1VH2 A;  3CQZ K;  4A93 K;  2NVX K;  3RZD K;  2JA5 C;  1HI9 A;  5C4J K;  1WSV A;  1XXA A;  2WAQ L;  3AD8 C;  2XCQ A;  3TTG A;  4IOA S;  4GTA A;  3GEI A;  1PJ5 A;  3GTQ C;  4BY7 K;  3PIP S;  5JVH S;  4P9S A;  1AB4 A;  2FQO A;  2JA6 C;  1TWG K;  3BUE A;  3HOU C;  2JA5 A;  4A3B C;  1XXC A;  4MEX A;  1ZBS A;  2YU9 A;  3HOV C;  1TWH A;  1R9T K;  5IP7 K;  3HKZ L;  4C3H C;  4MQ9 A;  1J6X A;  3S1N K;  5FLM C;  1WOO A;  4A3E K;  1IL2 A;  3I4N K;  3S2H C;  4P5B A;  2PPB A;  1B4B A;  5FLM K;  4C2M C;  3GSI A;  2R93 K;  2R7Z A;  4J3N A;  1YCL A;  2R7Z K;  4QJV A;  3H0G A;  4A3J C;  3S2D C;  2O5I A;  3S14 C;  3GTO K;  1XZP B;  3JST A;  3PO3 C;  2KXY A;  1Y1W A;  4A3F K;  2NVQ K;  2ZUE A;  1FEU A;  3FOE A;  4LJZ A;  1USM A;  1IS1 A;  1SFO C;  3GTJ C;  1VRQ C;  4KC6 A;  4GT9 A;  4C2M K;  1R9T A;  1O2B A;  4BXX K;  4KDD A;  3HOX K;  4KN4 A;  4Y52 K;  3GTK C;  1VGX A;  2JA5 K;  3A8I A;  2ZJR S;  5HL8 A;  3OEP A;  4LR2 A;  5IOS A;  1XZQ A;  4KMH A;  1I3Q A;  4YFX A;  4BY1 K;  3ERE D;  2PHC B;  2NVY K;  4BXX C;  1O25 A;  1C0A A;  1K83 C;  4A3G K;  3N0B A;  2NVX A;  1I6H C;  1BDF A;  1TWC A;  2ZFZ A;  1TWC C;  3H3V D;  1DD5 A;  1O24 A;  3PO2 K;  2E2J K;  3HOY C;  4C3J C;  1I3Q K;  4A3E C;  2WB1 D;  1Y1W C;  1J6V A;  4GFQ A;  5HQH A;  4WJ4 A;  1I6H K;  3OPF A;  5JFE A;  2BE5 A;  4YG2 A;  3GTL C;  3GTM A;  3H0G C;  3RZO K;  4C3I K;  3MML B;  4X6A K;  3WOD A;  3T01 A;  3DXJ A;  3S14 K;  1EK8 A;  2PA8 L;  3GTP C;  4GTE A;  2Y0S L;  2B63 C;  3HOX C;  5C4X K;  3SZY A;  1XZP A; 
#chains in the Genus database with same CATH homology
 2JA8 K;  3CQZ K;  4A3L C;  4A93 K;  2Y0S D;  2NVX K;  5IP9 C;  3RZD K;  4A3L K;  2JA5 C;  5C4J K;  1TWF C;  2E2H C;  3RZD C;  2WAQ L;  5IP9 K;  2PA8 D;  4YFN A;  4QIW D;  2E2H K;  4LK1 A;  4C3J K;  3HOV K;  3HOW K;  3GTQ C;  1I50 C;  1R9T C;  2WB1 L;  4KMU A;  5C4X C;  4BY7 K;  2NVX C;  3HOW C;  3HOU K;  5C44 C;  4BY7 C;  3GTQ K;  3S16 K;  4OIP A;  2JA6 C;  1TWG K;  5IYB C;  3HOU C;  4A3B C;  2A6E A;  1TWG C;  2JA6 K;  4A3B K;  4MEX A;  5IYB K;  2E2J C;  3HOV C;  2R92 K;  1I50 K;  4BBR K;  5IP7 K;  1R9T K;  3HKZ L;  4C3H C;  5IYC C;  4MQ9 A;  3S1N K;  3GTL K;  5FLM C;  3S16 C;  5M5X K;  2CW0 A;  3S15 K;  4BBS C;  3EQL A;  4A3E K;  3K7A C;  4C3I C;  1I6V A;  3H3V L;  3S2H K;  1TWA C;  3I4N K;  3S2H C;  4NOI A;  1TWH K;  1XPP A;  3HOZ K;  3M3Y C;  4A3I C;  2PPB A;  3M4O K;  4A3C K;  5FLM K;  4C2M C;  2R93 K;  4ZH4 A;  5M5Y K;  3S1Q C;  2R7Z K;  4QJV A;  4A3M C;  1I3Q C;  3HOY K;  4JK1 A;  4A3J C;  3FKI C;  2O5I A;  3RZO C;  3S2D C;  3S14 C;  3H0G K;  4AYB L;  2B63 K;  4YFK A;  3GTO K;  3I4M C;  2YU9 C;  1Y1W K;  3PO3 C;  4A3D K;  4LLG A;  4GZY A;  5C3E K;  4A3F K;  3S1M K;  5IYD C;  1WCM K;  3GTJ K;  2NVQ K;  4QIW L;  4LJZ A;  4OIQ A;  1SFO C;  3GTJ C;  5TMF A;  2PMZ L;  1YNN A;  2A68 A;  4C2M K;  4Y52 C;  4BXX K;  4Q5S A;  3HOX K;  4KN4 A;  4X6A C;  4Q4Z A;  3GTK C;  4KN7 A;  2VUM C;  1TWF K;  2NVT K;  2JA5 K;  1SMY A;  4A3K K;  4Y7N K;  5TMC A;  3GTK K;  3CQZ C;  4XLP A;  3S17 C;  4Y7N C;  4G7O A;  3GTG K;  3GTP K;  2E2I C;  3S1M C;  3GTG C;  3S17 K;  2O5J A;  2E2I K;  2NVY C;  5M3M K;  2A6H A;  4G7H A;  2NVT C;  4YFX A;  4BY1 K;  2VUM K;  1HQM A;  1YNJ A;  4A3K C;  4A3G C;  4BY1 C;  1Y1V K;  4AYB D;  4BXX C;  2NVY K;  1Y1V C;  3S15 C;  1K83 C;  5M5W K;  4A3G K;  1I6H C;  1BDF A;  1TWC K;  3M3Y K;  1K83 K;  5IYC K;  4C3H K;  5IP7 C;  4LK0 A;  1TWC C;  3H3V D;  2R92 C;  3PO2 K;  2E2J K;  3HOY C;  4C3J C;  1I3Q K;  4A3E C;  4OIN A;  3S1R K;  2JA7 K;  4BBS K;  2WB1 D;  3GTO C;  1Y1W C;  3I4M K;  3I4N C;  5C44 K;  4Y52 K;  4A3J K;  3S2D K;  4OIO A;  1WCM C;  2NVQ C;  3K7A K;  5IYD K;  4XLN A;  4A3C C;  3M4O C;  4A3I K;  3HKZ D;  1I6H K;  3PO3 K;  2BE5 A;  1TWH C;  4XSZ A;  4YG2 A;  5D4D A;  3S1R C;  2JA7 C;  3GTL C;  3HOZ C;  1SFO K;  2WAQ D;  3H0G C;  4MEY A;  4BBR C;  4XSX A;  3PO2 C;  3FKI K;  5FJ8 K;  3RZO K;  4C3I K;  3S1N C;  2A69 A;  3WOD A;  2R7Z C;  1TWA K;  4X6A K;  2PMZ D;  4A93 C;  4A3M K;  3DXJ A;  3S14 K;  1IW7 A;  2PA8 L;  4QJV B;  3GTP C;  2YU9 K;  1ZYR A;  4A3D C;  3GTM K;  5C4J C;  2Y0S L;  5C3E C;  4A3F C;  5M3F K;  3GTM C;  2B63 C;  3HOX C;  5C4X K;  2R93 C;  2JA8 C;  3S1Q K;  4OIR A;  4G7Z A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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