3S2DC

Rna polymerase ii initiation complex with a 5-nt rna containing a 5br-u
Total Genus 60
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
60
sequence length
266
structure length
266
Chain Sequence
b'EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD'
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Initiation complex structure and promoter proofreading.
pubmed doi rcsb
molecule tags Transcription/rna/dna
total genus 60
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-05-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3s2dC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3s2dC01
3M3YK 3HKZL 4C3JC 3H3VL 4LK0A 3GTQC 2JA7C 3S16K 3PO2C 4BBRC 4C3HK 4XLPA 3HOVK 1WCMC 2NVXC 2BE5A 3GTKC 5TMCA 2PPBA 1TWFK 4MEXA 3GTPK 1I3QK 4X6AC 4XSXA 4OINA 4A3FK 3S1NC 4YFNA 1I3QC 3RZDC 4MQ9A 1I50K 5TMFA 3S1RC 1TWCK 4A3LC 2JA5C 4Y7NK 2E2HK 2JA8K 4OIRA 4YFKA 2O5JA 1Y1WK 1TWCC 4ZH4A 2E2HC 2JA8C 3S14C 1XPPA 5IP9K 3GTOK 3I4MK 5IYBK 2R92C 3CQZK 1R9TK 3HOWC 5IP7K 2YU9K 3HOZC 2PA8L 4A3KK 3GTGK 4G7HA 4XLNA 2YU9C 2VUMC 3GTMK 3DXJA 3GTGC 5IYCK 4OIQA 3S2HC 4OIPA 4QJVB 5M5WK 2NVYK 4Q4ZA 4Y52K 3M3YC 5C4XK 4AYBD 4A93K 3S1MK 5FLMK 4BY7K 3H0GK 4KMUA 1TWHK 3S16C 5C4XC 4C3HC 3HOVC 3HOYK 5FLMC 4QIWD 3H0GC 1TWFC 5C3EK 5C44K 3GTPC 1YNJA 3HOUK 2Y0SD 2E2IK 4A3FC 4KN4A 2A69A 5M5XK 4A3CK 4BXXK 1I50C 2E2IC 3HOXK 3I4NK 4Y7NC 4AYBL 3RZOK 4GZYA 3S17K 4A3BK 4G7OA 1Y1WC 4A3JK 1K83K 3S15K 4BBSK 5IYDK 3EQLA 5IP9C 2O5IA 3GTOC 1YNNA 3I4MC 5M5YK 5IYBC 5IYDC 3CQZC 1TWAK 1R9TC 4A3EK 2WAQD 5M3FK 5IP7C 2B63K 2NVTK 4A3GK 1I6HK 4A3KC 1I6HC 1TWGK 3S2DK 3GTMC 3S1QK 2PMZD 3K7AK 3GTJK 2R7ZK 3PO3K 4YFXA 4A3DK 1TWGC 5IYCC 4C3IK 3M4OK 2R7ZC 3GTJC 3FKIK 2NVYC 4Y52C 3M4OC 1SMYA 1SFOK 2E2JK 4A93C 3S1MC 4BY7C 2WAQL 3GTLK 1TWHC 5C4JK 3H3VD 3HOYC 1BDFA 2R93K 5C3EC 5C44C 2PMZL 2NVQK 3HOUC 2A6HA 4A3CC 4BXXC 4KN7A 4C2MK 4A3MK 3HOXC 4C3JK 4G7ZA 3RZOC 3I4NC 3GTQK 3S17C 4A3BC 4QIWL 2JA7K 4A3JC 3S15C 1K83C 4BBRK 4BBSC 3PO2K 2Y0SL 4LJZA 1WCMK 2NVXK 3GTKK 2JA6K 1TWAC 4A3EC 4X6AK 2NVTC 2B63C 1HQMA 4A3GC 4XSZA 4QJVA 2JA6C 3S1NK 4JK1A 3RZDK 3S2DC 4A3IK 3WODA 2PA8D 3K7AC 3PO3C 3S1QC 2A6EA 4Q5SA 4A3DC 4LLGA 1Y1VK 2JA5K 4A3LK 4C3IC 4A3IC 1Y1VC 2WB1D 3FKIC 3S14K 4MEYA 4NOIA 2R92K 3HKZD 1SFOC 2E2JC 3HOWK 3GTLC 5D4DA 3HOZK 4LK1A 1I6VA 1IW7A 5C4JC 5M3MK 3S1RK 5FJ8K 2R93C 2A68A 2VUMK 4OIOA 4BY1K 2NVQC 2CW0A 4YG2A 1ZYRA 3S2HK 4BY1C 2WB1L 4C2MC 4A3MC
chains in the Genus database with same CATH superfamily
1KQ4A 2W7VA 4C3JC 4LK0A 4BBRC 4C3HK 3HOVK 1WSVA 1WCMC 2NVXC 2BE5A 3GTKC 1J6XA 4MEXA 1EFWA 1WQGA 3T00A 4XSXA 3S1NC 4YFNA 1DCOA 5TMFA 2R93A 2JA8K 4Y7NK 2E2HC 3I4MK 1XPPA 3QX3A 1V5VA 4WF9S 5IYBK 3OEPA 1R9TK 4J3NA 1ZXOA 3GEIA 4G7HA 4KASA 3HXAA 5IYCK 4OIQA 4QJVB 1YCLA 1WOSA 4LOWA 1WQFA 4A93K 5FLMK 1IS1A 1HI9A 4C3HC 3HOVC 3CAGA 5M5XK 3AD7C 4BXXK 1WIHA 2GAHC 4Y7NC 1O2FB 1K83K 3I4MC 2O5IA 2EBBA 1USOA 5IYBC 4O2DA 4IOAS 1TWAK 1R9TC 2B63K 3FOFA 5HL7S 2D6FC 3K7AK 3GTJK 4YFXA 1PJ5A 5IYCC 3AH5A 2R7ZC 1EH1A 3FKIK 3M4OC 4KM8A 1SFOK 3PIPS 4A93C 3GTLK 2L5NA 1JQWA 4GTLA 3GSIA 1WOPA 1K83A 2A6HA 1TWAA 2CFAB 4BXXC 4A3MK 2B63A 4WFAS 1O28A 3GIRA 5DM7S 3GTQK 3PO2K 1K83C 3GTJA 2Y0SL 1X31C 1TWAC 4X6AK 4KAWX 3FKIA 2B63C 5IORA 1TWHA 3RZDK 1SFOA 5HQHA 2ZUEA 3GTLA 4Q5SA 3K7AC 1C0AA 3TTGA 1JOEA 3LAPA 3FKIC 3S14K 4ILDA 3HKZD 3ERED 1SFOC 3HOWK 3GTLC 3HOZK 4LK1A 1I6VA 3GTQA 2V6UA 3L4JA 2WB1L 4A3MC 5JVGS 3M3YK 3H3VL 4FZBA 3GTQC 3S16K 3PO2C 3L4KA 1XZPA 3AD9C 2FQTA 5IOTA 1TWFK 5TMCA 2PPBA 4X6AC 1XXAA 4GTBA 4OINA 1O2AA 1L0WA 1DCHA 3RZDC 4MQ9A 3Q3QA 4G0UA 2E2HK 4YFKA 3S14C 3JSTA 5IP9K 3HOWC 3HOZC 4BLBA 3V4GA 4A3KK 1DCPA 2YU9C 3GTMK 3GTKA 1GE9A 3GTGC 4KB2A 2NVYK 5CJ9A 5M5WK 4WJ4A 3M3YC 3BP8C 1O25A 3S16C 2KWAA 2E2HA 1IE0A 3AQPA 4QIWD 1TWFC 1BGWA 5JVHS 3ADAC 1YNJA 3HOUK 1EK8A 1XXCA 2A69A 1J6WA 3HOXK 1VGXA 3I4NK 3GTMA 4BBSK 5IP9C 1WSRA 1EI6A 4WJ3M 2XCQA 5IYDC 1INNA 5M3FK 2NVYA 4A3KC 1I6HC 3S2DK 3GTMC 2P5MA 2PMZD 2R7ZK 3PO3K 1F93A 3M4OK 2NVYC 1JVIA 1O27A 1SMYA 1RU0A 5C4JK 4GFQA 4C45A 1J98A 1BDFA 3HOUC 1R9TA 4GTDA 4C2MK 3TFJA 3HOXC 3I4NC 2JA7K 2L3UA 4BBSC 2R7ZA 3G4CA 4WCES 1VJEA 1HQMA 4JK1A 3S2DC 3S1RK 1J6VA 3PO3C 4A3LK 3N3YA 2A6EA 2JA5K 4LLGA 1Y1VC 4MEYA 4NOIA 2R92K 4BLAA 5C4JC 1IW7A 5M3MK 5E68A 3SZYA 2VUMK 4OIOA 3GEHA 4GTCA 5IOQA 2JA7A 4YG2A 4C2MC 4GTEA 1USMA 3HKZL 2XCRB 2JA7C 2XCOA 1YX2A 4XLPA 2JA5A 3N0BA 3PIOS 5DM6S 3FHZA 3LPXA 3GTPK 2R92A 1I3QC 4BKWA 3S1RC 4A3LC 2JA5C 1B4BA 2O5JA 1TWCC 4ZH4A 3BP3A 4RMFA 2VUMA 1ZVUA 3GTOK 2R92C 3G4AA 3LAJA 5IP7K 2YU9K 2PA8L 3T02A 3GTGK 3LYWA 2VUMC 3DXJA 3A8KA 2JH3A 4OIPA 3MMLB 3GEEA 4Y52K 4XCHA 1ZQ1C 4AYBD 4BY7K 3S1MK 4KMUA 5C4XC 3FOEA 3HOYK 3H0GC 5C3EK 1IBAA 3GTPC 2Y0SD 3GTOA 4P5AA 2E2IC 1F7UA 2YU9A 3RZOK 4GZYA 4KM9A 3GTGA 5IYDK 4A3JK 3GTOC 1YNNA 1XXBA 1UV7A 4KMDA 1VLOA 1I6HK 2WAQD 3TFIA 5IP7C 2NVTK 1XZPB 4FM9A 4LQYA 1TWFA 1TWGC 1F9NA 4Y52C 2E2JK 4KB4A 4BY7C 3S1MC 4GTFA 3H3VD 2ZJRS 3HOYC 1O24A 2R93K 5C3EC 2PMZL 2NVQK 3DLLS 2GSOA 3RZOC 1XZQB 4GTAA 4A3JC 3A8JA 4M1XA 2FQOA 4KDDA 2NVTC 1VH2A 4QJVA 2JA6C 2V6SA 1IQ0A 3WODA 1Y1VK 2Y3PA 2KQ1A 1PJ7A 4A3IC 2KXYA 2RGRA 4KATA 2GSNA 2E2JC 4WILA 3SZZA 5FJ8K 2R93C 2A68A 3CF5S 2NVQC 4KMAA 3S2HK 4BY1C 4PAAA 1VRQC 4G0VA 1G51A 2GAGC 4P9SA 5L46A 1Y1VA 2RH6A 1I3QK 1ISEA 3GDZA 4A3FK 1I50K 1TWCK 3VA7A 2ZJQS 4OIRA 1Y1WK 2ZJPS 2JA8C 2KPUA 3NUHA 3CQZK 4KARA 4LR2A 3OPFA 2CFAA 3TFHA 4XLNA 1B4AA 4IOCS 3S2HC 4Q4ZA 1I3QA 5C4XK 3H0GK 1TWHK 1I50A 2ZFZA 1TWCA 5FLMC 3IPJA 5C44K 1DD5A 1Y1WA 4GT9A 2E2IK 4KMHA 4A3FC 4KN4A 2V6TA 4A3CK 3CQZA 4G0WA 1I50C 4DDQA 1WORA 3A8IA 4AYBL 1WOOA 3AD8C 3S17K 4A3BK 5EGHA 4G7OA 1Y1WC 3T01A 3S15K 4PABA 3EQLA 1EQRA 1BS2A 5EGEA 5JVOA 5CHPA 5M5YK 2ZUFA 3CQZC 4A3EK 1FEUA 4A3GK 3BUEA 5JFEA 1WQHA 2PHCB 4KC6A 1TWGK 3S1QK 3H0GA 1O26A 4A3DK 3GTPA 4U67S 4C3IK 4WFBS 3GTJC 2GSUA 2E2IA 1PJ6A 3AQOA 1O2BA 2WAQL 4AH6A 1TWHC 4WFNS 4IO9S 5C44C 4P5BA 4A3CC 1AB4A 1ZBSA 4KN7A 4C3JK 4G7ZA 5TJ3A 3N0CA 3OREA 3S17C 4A3BC 4QIWL 3S15C 1TWGA 4BBRK 5IOSA 4LJZA 2P8TA 1WCMK 5HL8A 2NVXK 2JA6K 3GTKK 1BJTA 4A3EC 4A3GC 4XSZA 3S1NK 3S0XA 1O29A 4A3IK 3S1QC 2PA8D 4A3DC 4C3IC 2WB1D 5D4DA 1F7VA 4BY1K 2CW0A 1ZYRA 1WCMA 2NVXA 2JA6A 1IL2A 1XZQA
chains in the Genus database with same CATH topology
3M3YK 3HKZL 4C3JC 3H3VL 4LK0A 3GTQC 2JA7C 3S16K 3PO2C 4BBRC 4C3HK 4XLPA 3HOVK 1WCMC 2NVXC 2BE5A 3GTKC 5TMCA 2PPBA 1TWFK 4MEXA 3GTPK 1I3QK 4X6AC 4XSXA 4OINA 4A3FK 3S1NC 4YFNA 1I3QC 3RZDC 4MQ9A 1I50K 5TMFA 3S1RC 1TWCK 4A3LC 2JA5C 4Y7NK 2E2HK 2JA8K 4OIRA 4YFKA 2O5JA 1Y1WK 1TWCC 4ZH4A 2E2HC 2JA8C 3S14C 1XPPA 5IP9K 3GTOK 3I4MK 5IYBK 2R92C 3CQZK 1R9TK 3HOWC 5IP7K 2YU9K 3HOZC 2PA8L 4A3KK 3GTGK 4G7HA 4XLNA 2YU9C 2VUMC 3GTMK 3DXJA 3GTGC 5IYCK 4OIQA 3S2HC 4OIPA 4QJVB 5M5WK 2NVYK 4Q4ZA 4Y52K 3M3YC 5C4XK 4AYBD 4A93K 3S1MK 5FLMK 4BY7K 3H0GK 4KMUA 1TWHK 3S16C 5C4XC 4C3HC 3HOVC 3HOYK 5FLMC 4QIWD 3H0GC 1TWFC 5C3EK 5C44K 3GTPC 1YNJA 3HOUK 2Y0SD 2E2IK 4A3FC 4KN4A 2A69A 5M5XK 4A3CK 4BXXK 1I50C 2E2IC 3HOXK 3I4NK 4Y7NC 4AYBL 3RZOK 4GZYA 3S17K 4A3BK 4G7OA 1Y1WC 4A3JK 1K83K 3S15K 4BBSK 5IYDK 3EQLA 5IP9C 2O5IA 3GTOC 1YNNA 3I4MC 5M5YK 5IYBC 5IYDC 3CQZC 1TWAK 1R9TC 4A3EK 2WAQD 5M3FK 5IP7C 2B63K 2NVTK 4A3GK 1I6HK 4A3KC 1I6HC 1TWGK 3S2DK 3GTMC 3S1QK 2PMZD 3K7AK 3GTJK 2R7ZK 3PO3K 4YFXA 4A3DK 1TWGC 5IYCC 4C3IK 3M4OK 2R7ZC 3GTJC 3FKIK 2NVYC 4Y52C 3M4OC 1SMYA 1SFOK 2E2JK 4A93C 3S1MC 4BY7C 2WAQL 3GTLK 1TWHC 5C4JK 3H3VD 3HOYC 1BDFA 2R93K 5C3EC 5C44C 2PMZL 2NVQK 3HOUC 2A6HA 4A3CC 4BXXC 4KN7A 4C2MK 4A3MK 3HOXC 4C3JK 4G7ZA 3RZOC 3I4NC 3GTQK 3S17C 4A3BC 4QIWL 2JA7K 4A3JC 3S15C 1K83C 4BBRK 4BBSC 3PO2K 2Y0SL 4LJZA 1WCMK 2NVXK 3GTKK 2JA6K 1TWAC 4A3EC 4X6AK 2NVTC 2B63C 1HQMA 4A3GC 4XSZA 4QJVA 2JA6C 3S1NK 4JK1A 3RZDK 3S2DC 4A3IK 3WODA 2PA8D 3K7AC 3PO3C 3S1QC 2A6EA 4Q5SA 4A3DC 4LLGA 1Y1VK 2JA5K 4A3LK 4C3IC 4A3IC 1Y1VC 2WB1D 3FKIC 3S14K 4MEYA 4NOIA 2R92K 3HKZD 1SFOC 2E2JC 3HOWK 3GTLC 5D4DA 3HOZK 4LK1A 1I6VA 1IW7A 5C4JC 5M3MK 3S1RK 5FJ8K 2R93C 2A68A 2VUMK 4OIOA 4BY1K 2NVQC 2CW0A 4YG2A 1ZYRA 3S2HK 4BY1C 2WB1L 4C2MC 4A3MC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3M3Y K;  3HKZ L;  4C3J C;  3H3V L;  4LK0 A;  3GTQ C;  2JA7 C;  3S16 K;  3PO2 C;  4BBR C;  4C3H K;  4XLP A;  3HOV K;  1WCM C;  2NVX C;  2BE5 A;  3GTK C;  5TMC A;  2PPB A;  1TWF K;  4MEX A;  3GTP K;  1I3Q K;  4X6A C;  4XSX A;  4OIN A;  4A3F K;  3S1N C;  4YFN A;  1I3Q C;  3RZD C;  4MQ9 A;  1I50 K;  5TMF A;  3S1R C;  1TWC K;  4A3L C;  2JA5 C;  4Y7N K;  2E2H K;  2JA8 K;  4OIR A;  4YFK A;  2O5J A;  1Y1W K;  1TWC C;  4ZH4 A;  2E2H C;  2JA8 C;  3S14 C;  1XPP A;  5IP9 K;  3GTO K;  3I4M K;  5IYB K;  2R92 C;  3CQZ K;  1R9T K;  3HOW C;  5IP7 K;  2YU9 K;  3HOZ C;  2PA8 L;  4A3K K;  3GTG K;  4G7H A;  4XLN A;  2YU9 C;  2VUM C;  3GTM K;  3DXJ A;  3GTG C;  5IYC K;  4OIQ A;  3S2H C;  4OIP A;  4QJV B;  5M5W K;  2NVY K;  4Q4Z A;  4Y52 K;  3M3Y C;  5C4X K;  4AYB D;  4A93 K;  3S1M K;  5FLM K;  4BY7 K;  3H0G K;  4KMU A;  1TWH K;  3S16 C;  5C4X C;  4C3H C;  3HOV C;  3HOY K;  5FLM C;  4QIW D;  3H0G C;  1TWF C;  5C3E K;  5C44 K;  3GTP C;  1YNJ A;  3HOU K;  2Y0S D;  2E2I K;  4A3F C;  4KN4 A;  2A69 A;  5M5X K;  4A3C K;  4BXX K;  1I50 C;  2E2I C;  3HOX K;  3I4N K;  4Y7N C;  4AYB L;  3RZO K;  4GZY A;  3S17 K;  4A3B K;  4G7O A;  1Y1W C;  4A3J K;  1K83 K;  3S15 K;  4BBS K;  5IYD K;  3EQL A;  5IP9 C;  2O5I A;  3GTO C;  1YNN A;  3I4M C;  5M5Y K;  5IYB C;  5IYD C;  3CQZ C;  1TWA K;  1R9T C;  4A3E K;  2WAQ D;  5M3F K;  5IP7 C;  2B63 K;  2NVT K;  4A3G K;  1I6H K;  4A3K C;  1I6H C;  1TWG K;  3S2D K;  3GTM C;  3S1Q K;  2PMZ D;  3K7A K;  3GTJ K;  2R7Z K;  3PO3 K;  4YFX A;  4A3D K;  1TWG C;  5IYC C;  4C3I K;  3M4O K;  2R7Z C;  3GTJ C;  3FKI K;  2NVY C;  4Y52 C;  3M4O C;  1SMY A;  1SFO K;  2E2J K;  4A93 C;  3S1M C;  4BY7 C;  2WAQ L;  3GTL K;  1TWH C;  5C4J K;  3H3V D;  3HOY C;  1BDF A;  2R93 K;  5C3E C;  5C44 C;  2PMZ L;  2NVQ K;  3HOU C;  2A6H A;  4A3C C;  4BXX C;  4KN7 A;  4C2M K;  4A3M K;  3HOX C;  4C3J K;  4G7Z A;  3RZO C;  3I4N C;  3GTQ K;  3S17 C;  4A3B C;  4QIW L;  2JA7 K;  4A3J C;  3S15 C;  1K83 C;  4BBR K;  4BBS C;  3PO2 K;  2Y0S L;  4LJZ A;  1WCM K;  2NVX K;  3GTK K;  2JA6 K;  1TWA C;  4A3E C;  4X6A K;  2NVT C;  2B63 C;  1HQM A;  4A3G C;  4XSZ A;  4QJV A;  2JA6 C;  3S1N K;  4JK1 A;  3RZD K;  3S2D C;  4A3I K;  3WOD A;  2PA8 D;  3K7A C;  3PO3 C;  3S1Q C;  2A6E A;  4Q5S A;  4A3D C;  4LLG A;  1Y1V K;  2JA5 K;  4A3L K;  4C3I C;  4A3I C;  1Y1V C;  2WB1 D;  3FKI C;  3S14 K;  4MEY A;  4NOI A;  2R92 K;  3HKZ D;  1SFO C;  2E2J C;  3HOW K;  3GTL C;  5D4D A;  3HOZ K;  4LK1 A;  1I6V A;  1IW7 A;  5C4J C;  5M3M K;  3S1R K;  5FJ8 K;  2R93 C;  2A68 A;  2VUM K;  4OIO A;  4BY1 K;  2NVQ C;  2CW0 A;  4YG2 A;  1ZYR A;  3S2H K;  4BY1 C;  2WB1 L;  4C2M C;  4A3M C; 
#chains in the Genus database with same CATH topology
 1KQ4 A;  2W7V A;  4C3J C;  4LK0 A;  4BBR C;  4C3H K;  3HOV K;  1WSV A;  1WCM C;  2NVX C;  2BE5 A;  3GTK C;  1J6X A;  4MEX A;  1EFW A;  1WQG A;  3T00 A;  4XSX A;  3S1N C;  4YFN A;  1DCO A;  5TMF A;  2R93 A;  2JA8 K;  4Y7N K;  2E2H C;  3I4M K;  1XPP A;  3QX3 A;  1V5V A;  4WF9 S;  5IYB K;  3OEP A;  1R9T K;  4J3N A;  1ZXO A;  3GEI A;  4G7H A;  4KAS A;  3HXA A;  5IYC K;  4OIQ A;  4QJV B;  1YCL A;  1WOS A;  4LOW A;  1WQF A;  4A93 K;  5FLM K;  1IS1 A;  1HI9 A;  4C3H C;  3HOV C;  3CAG A;  5M5X K;  3AD7 C;  4BXX K;  1WIH A;  2GAH C;  4Y7N C;  1O2F B;  1K83 K;  3I4M C;  2O5I A;  2EBB A;  1USO A;  5IYB C;  4O2D A;  4IOA S;  1TWA K;  1R9T C;  2B63 K;  3FOF A;  5HL7 S;  2D6F C;  3K7A K;  3GTJ K;  4YFX A;  1PJ5 A;  5IYC C;  3AH5 A;  2R7Z C;  1EH1 A;  3FKI K;  3M4O C;  4KM8 A;  1SFO K;  3PIP S;  4A93 C;  3GTL K;  2L5N A;  1JQW A;  4GTL A;  3GSI A;  1WOP A;  1K83 A;  2A6H A;  1TWA A;  2CFA B;  4BXX C;  4A3M K;  2B63 A;  4WFA S;  1O28 A;  3GIR A;  5DM7 S;  3GTQ K;  3PO2 K;  1K83 C;  3GTJ A;  2Y0S L;  1X31 C;  1TWA C;  4X6A K;  4KAW X;  3FKI A;  2B63 C;  5IOR A;  1TWH A;  3RZD K;  1SFO A;  5HQH A;  2ZUE A;  3GTL A;  4Q5S A;  3K7A C;  1C0A A;  3TTG A;  1JOE A;  3LAP A;  3FKI C;  3S14 K;  4ILD A;  3HKZ D;  3ERE D;  1SFO C;  3HOW K;  3GTL C;  3HOZ K;  4LK1 A;  1I6V A;  3GTQ A;  2V6U A;  3L4J A;  2WB1 L;  4A3M C;  5JVG S;  3M3Y K;  3H3V L;  4FZB A;  3GTQ C;  3S16 K;  3PO2 C;  3L4K A;  1XZP A;  3AD9 C;  2FQT A;  5IOT A;  1TWF K;  5TMC A;  2PPB A;  4X6A C;  1XXA A;  4GTB A;  4OIN A;  1O2A A;  1L0W A;  1DCH A;  3RZD C;  4MQ9 A;  3Q3Q A;  4G0U A;  2E2H K;  4YFK A;  3S14 C;  3JST A;  5IP9 K;  3HOW C;  3HOZ C;  4BLB A;  3V4G A;  4A3K K;  1DCP A;  2YU9 C;  3GTM K;  3GTK A;  1GE9 A;  3GTG C;  4KB2 A;  2NVY K;  5CJ9 A;  5M5W K;  4WJ4 A;  3M3Y C;  3BP8 C;  1O25 A;  3S16 C;  2KWA A;  2E2H A;  1IE0 A;  3AQP A;  4QIW D;  1TWF C;  1BGW A;  5JVH S;  3ADA C;  1YNJ A;  3HOU K;  1EK8 A;  1XXC A;  2A69 A;  1J6W A;  3HOX K;  1VGX A;  3I4N K;  3GTM A;  4BBS K;  5IP9 C;  1WSR A;  1EI6 A;  4WJ3 M;  2XCQ A;  5IYD C;  1INN A;  5M3F K;  2NVY A;  4A3K C;  1I6H C;  3S2D K;  3GTM C;  2P5M A;  2PMZ D;  2R7Z K;  3PO3 K;  1F93 A;  3M4O K;  2NVY C;  1JVI A;  1O27 A;  1SMY A;  1RU0 A;  5C4J K;  4GFQ A;  4C45 A;  1J98 A;  1BDF A;  3HOU C;  1R9T A;  4GTD A;  4C2M K;  3TFJ A;  3HOX C;  3I4N C;  2JA7 K;  2L3U A;  4BBS C;  2R7Z A;  3G4C A;  4WCE S;  1VJE A;  1HQM A;  4JK1 A;  3S2D C;  3S1R K;  1J6V A;  3PO3 C;  4A3L K;  3N3Y A;  2A6E A;  2JA5 K;  4LLG A;  1Y1V C;  4MEY A;  4NOI A;  2R92 K;  4BLA A;  5C4J C;  1IW7 A;  5M3M K;  5E68 A;  3SZY A;  2VUM K;  4OIO A;  3GEH A;  4GTC A;  5IOQ A;  2JA7 A;  4YG2 A;  4C2M C;  4GTE A;  1USM A;  3HKZ L;  2XCR B;  2JA7 C;  2XCO A;  1YX2 A;  4XLP A;  2JA5 A;  3N0B A;  3PIO S;  5DM6 S;  3FHZ A;  3LPX A;  3GTP K;  2R92 A;  1I3Q C;  4BKW A;  3S1R C;  4A3L C;  2JA5 C;  1B4B A;  2O5J A;  1TWC C;  4ZH4 A;  3BP3 A;  4RMF A;  2VUM A;  1ZVU A;  3GTO K;  2R92 C;  3G4A A;  3LAJ A;  5IP7 K;  2YU9 K;  2PA8 L;  3T02 A;  3GTG K;  3LYW A;  2VUM C;  3DXJ A;  3A8K A;  2JH3 A;  4OIP A;  3MML B;  3GEE A;  4Y52 K;  4XCH A;  1ZQ1 C;  4AYB D;  4BY7 K;  3S1M K;  4KMU A;  5C4X C;  3FOE A;  3HOY K;  3H0G C;  5C3E K;  1IBA A;  3GTP C;  2Y0S D;  3GTO A;  4P5A A;  2E2I C;  1F7U A;  2YU9 A;  3RZO K;  4GZY A;  4KM9 A;  3GTG A;  5IYD K;  4A3J K;  3GTO C;  1YNN A;  1XXB A;  1UV7 A;  4KMD A;  1VLO A;  1I6H K;  2WAQ D;  3TFI A;  5IP7 C;  2NVT K;  1XZP B;  4FM9 A;  4LQY A;  1TWF A;  1TWG C;  1F9N A;  4Y52 C;  2E2J K;  4KB4 A;  4BY7 C;  3S1M C;  4GTF A;  3H3V D;  2ZJR S;  3HOY C;  1O24 A;  2R93 K;  5C3E C;  2PMZ L;  2NVQ K;  3DLL S;  2GSO A;  3RZO C;  1XZQ B;  4GTA A;  4A3J C;  3A8J A;  4M1X A;  2FQO A;  4KDD A;  2NVT C;  1VH2 A;  4QJV A;  2JA6 C;  2V6S A;  1IQ0 A;  3WOD A;  1Y1V K;  2Y3P A;  2KQ1 A;  1PJ7 A;  4A3I C;  2KXY A;  2RGR A;  4KAT A;  2GSN A;  2E2J C;  4WIL A;  3SZZ A;  5FJ8 K;  2R93 C;  2A68 A;  3CF5 S;  2NVQ C;  4KMA A;  3S2H K;  4BY1 C;  4PAA A;  1VRQ C;  4G0V A;  1G51 A;  2GAG C;  4P9S A;  5L46 A;  1Y1V A;  2RH6 A;  1I3Q K;  1ISE A;  3GDZ A;  4A3F K;  1I50 K;  1TWC K;  3VA7 A;  2ZJQ S;  4OIR A;  1Y1W K;  2ZJP S;  2JA8 C;  2KPU A;  3NUH A;  3CQZ K;  4KAR A;  4LR2 A;  3OPF A;  2CFA A;  3TFH A;  4XLN A;  1B4A A;  4IOC S;  3S2H C;  4Q4Z A;  1I3Q A;  5C4X K;  3H0G K;  1TWH K;  1I50 A;  2ZFZ A;  1TWC A;  5FLM C;  3IPJ A;  5C44 K;  1DD5 A;  1Y1W A;  4GT9 A;  2E2I K;  4KMH A;  4A3F C;  4KN4 A;  2V6T A;  4A3C K;  3CQZ A;  4G0W A;  1I50 C;  4DDQ A;  1WOR A;  3A8I A;  4AYB L;  1WOO A;  3AD8 C;  3S17 K;  4A3B K;  5EGH A;  4G7O A;  1Y1W C;  3T01 A;  3S15 K;  4PAB A;  3EQL A;  1EQR A;  1BS2 A;  5EGE A;  5JVO A;  5CHP A;  5M5Y K;  2ZUF A;  3CQZ C;  4A3E K;  1FEU A;  4A3G K;  3BUE A;  5JFE A;  1WQH A;  2PHC B;  4KC6 A;  1TWG K;  3S1Q K;  3H0G A;  1O26 A;  4A3D K;  3GTP A;  4U67 S;  4C3I K;  4WFB S;  3GTJ C;  2GSU A;  2E2I A;  1PJ6 A;  3AQO A;  1O2B A;  2WAQ L;  4AH6 A;  1TWH C;  4WFN S;  4IO9 S;  5C44 C;  4P5B A;  4A3C C;  1AB4 A;  1ZBS A;  4KN7 A;  4C3J K;  4G7Z A;  5TJ3 A;  3N0C A;  3ORE A;  3S17 C;  4A3B C;  4QIW L;  3S15 C;  1TWG A;  4BBR K;  5IOS A;  4LJZ A;  2P8T A;  1WCM K;  5HL8 A;  2NVX K;  2JA6 K;  3GTK K;  1BJT A;  4A3E C;  4A3G C;  4XSZ A;  3S1N K;  3S0X A;  1O29 A;  4A3I K;  3S1Q C;  2PA8 D;  4A3D C;  4C3I C;  2WB1 D;  5D4D A;  1F7V A;  4BY1 K;  2CW0 A;  1ZYR A;  1WCM A;  2NVX A;  2JA6 A;  1IL2 A;  1XZQ A; 
#chains in the Genus database with same CATH homology
 3M3Y K;  3HKZ L;  4C3J C;  3H3V L;  4LK0 A;  3GTQ C;  2JA7 C;  3S16 K;  3PO2 C;  4BBR C;  4C3H K;  4XLP A;  3HOV K;  1WCM C;  2NVX C;  2BE5 A;  3GTK C;  5TMC A;  2PPB A;  1TWF K;  4MEX A;  3GTP K;  1I3Q K;  4X6A C;  4XSX A;  4OIN A;  4A3F K;  3S1N C;  4YFN A;  1I3Q C;  3RZD C;  4MQ9 A;  1I50 K;  5TMF A;  3S1R C;  1TWC K;  4A3L C;  2JA5 C;  4Y7N K;  2E2H K;  2JA8 K;  4OIR A;  4YFK A;  2O5J A;  1Y1W K;  1TWC C;  4ZH4 A;  2E2H C;  2JA8 C;  3S14 C;  1XPP A;  5IP9 K;  3GTO K;  3I4M K;  5IYB K;  2R92 C;  3CQZ K;  1R9T K;  3HOW C;  5IP7 K;  2YU9 K;  3HOZ C;  2PA8 L;  4A3K K;  3GTG K;  4G7H A;  4XLN A;  2YU9 C;  2VUM C;  3GTM K;  3DXJ A;  3GTG C;  5IYC K;  4OIQ A;  3S2H C;  4OIP A;  4QJV B;  5M5W K;  2NVY K;  4Q4Z A;  4Y52 K;  3M3Y C;  5C4X K;  4AYB D;  4A93 K;  3S1M K;  5FLM K;  4BY7 K;  3H0G K;  4KMU A;  1TWH K;  3S16 C;  5C4X C;  4C3H C;  3HOV C;  3HOY K;  5FLM C;  4QIW D;  3H0G C;  1TWF C;  5C3E K;  5C44 K;  3GTP C;  1YNJ A;  3HOU K;  2Y0S D;  2E2I K;  4A3F C;  4KN4 A;  2A69 A;  5M5X K;  4A3C K;  4BXX K;  1I50 C;  2E2I C;  3HOX K;  3I4N K;  4Y7N C;  4AYB L;  3RZO K;  4GZY A;  3S17 K;  4A3B K;  4G7O A;  1Y1W C;  4A3J K;  1K83 K;  3S15 K;  4BBS K;  5IYD K;  3EQL A;  5IP9 C;  2O5I A;  3GTO C;  1YNN A;  3I4M C;  5M5Y K;  5IYB C;  5IYD C;  3CQZ C;  1TWA K;  1R9T C;  4A3E K;  2WAQ D;  5M3F K;  5IP7 C;  2B63 K;  2NVT K;  4A3G K;  1I6H K;  4A3K C;  1I6H C;  1TWG K;  3S2D K;  3GTM C;  3S1Q K;  2PMZ D;  3K7A K;  3GTJ K;  2R7Z K;  3PO3 K;  4YFX A;  4A3D K;  1TWG C;  5IYC C;  4C3I K;  3M4O K;  2R7Z C;  3GTJ C;  3FKI K;  2NVY C;  4Y52 C;  3M4O C;  1SMY A;  1SFO K;  2E2J K;  4A93 C;  3S1M C;  4BY7 C;  2WAQ L;  3GTL K;  1TWH C;  5C4J K;  3H3V D;  3HOY C;  1BDF A;  2R93 K;  5C3E C;  5C44 C;  2PMZ L;  2NVQ K;  3HOU C;  2A6H A;  4A3C C;  4BXX C;  4KN7 A;  4C2M K;  4A3M K;  3HOX C;  4C3J K;  4G7Z A;  3RZO C;  3I4N C;  3GTQ K;  3S17 C;  4A3B C;  4QIW L;  2JA7 K;  4A3J C;  3S15 C;  1K83 C;  4BBR K;  4BBS C;  3PO2 K;  2Y0S L;  4LJZ A;  1WCM K;  2NVX K;  3GTK K;  2JA6 K;  1TWA C;  4A3E C;  4X6A K;  2NVT C;  2B63 C;  1HQM A;  4A3G C;  4XSZ A;  4QJV A;  2JA6 C;  3S1N K;  4JK1 A;  3RZD K;  3S2D C;  4A3I K;  3WOD A;  2PA8 D;  3K7A C;  3PO3 C;  3S1Q C;  2A6E A;  4Q5S A;  4A3D C;  4LLG A;  1Y1V K;  2JA5 K;  4A3L K;  4C3I C;  4A3I C;  1Y1V C;  2WB1 D;  3FKI C;  3S14 K;  4MEY A;  4NOI A;  2R92 K;  3HKZ D;  1SFO C;  2E2J C;  3HOW K;  3GTL C;  5D4D A;  3HOZ K;  4LK1 A;  1I6V A;  1IW7 A;  5C4J C;  5M3M K;  3S1R K;  5FJ8 K;  2R93 C;  2A68 A;  2VUM K;  4OIO A;  4BY1 K;  2NVQ C;  2CW0 A;  4YG2 A;  1ZYR A;  3S2H K;  4BY1 C;  2WB1 L;  4C2M C;  4A3M C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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