3S2DC

Rna polymerase ii initiation complex with a 5-nt rna containing a 5br-u
Total Genus 60
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
60
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Initiation complex structure and promoter proofreading.
pubmed doi rcsb
molecule tags Transcription/rna/dna
total genus 60
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-05-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3s2dC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3s2dC01
3HOWC 3S14K 1I6VA 2NVXC 3HOVC 4MEYA 4C2MC 3HOUK 3M3YK 2Y0SD 4XSZA 1WCMC 2JA6K 2CW0A 5IYCC 4QIWD 1SFOC 4A3CC 1R9TK 2A69A 2JA5C 5C4JC 4A3GK 4BBSK 5C44C 4A3MC 3H0GC 2E2JC 2NVQK 2R93K 4LJZA 3HOXC 4A3FK 2A6EA 3S1QC 1I50K 4LK1A 4KN4A 3HKZL 3K7AC 3S17K 3S1MK 4XLNA 4A3DK 2NVYC 3HOZK 3S15C 1Y1WK 1TWCC 3S1NK 5D4DA 5IYBC 4G7HA 2R92K 3M4OC 4Q5SA 4A3JK 4C3HC 2VUMC 4KMUA 2WAQL 4YG2A 4C3IC 4YFXA 4XSXA 3FKIK 3PO3K 3GTLK 4C3JK 5M5YK 4A93C 2E2HC 1SMYA 1R9TC 3CQZC 2NVTK 1TWHK 4BBSC 4X6AC 4A3KK 1TWGC 4LLGA 3GTKC 1K83C 1IW7A 5FLMC 2WB1D 2Y0SL 3GTPK 2O5JA 5C3EK 4JK1A 2PMZD 4XLPA 2PPBA 4A3DC 1Y1VC 4MQ9A 3I4MK 5IP9C 4OIRA 4BY7C 2B63K 3S1NC 4A3BK 2R92C 3HOYC 4BXXK 5IP7C 3GTJK 2JA8C 1HQMA 2R7ZK 5FJ8K 2A68A 5M5WK 4BY1K 1YNJA 1I6HK 3FKIC 1TWFK 3RZOC 5M3FK 3S16K 3RZDC 5M5XK 3I4NK 3S2DK 4GZYA 4AYBL 4Y7NC 3GTGK 3H3VD 3S14C 4QJVB 2PA8D 3HOUC 4YFKA 4A3KC 4A3EK 3M3YC 1YNNA 4A3LK 4Y52K 3S1RK 2JA6C 2BE5A 4LK0A 3GTPC 5IYDK 4MEXA 1TWAK 4A3GC 4NOIA 4QJVA 4BBRK 2NVQC 2R93C 5IYCK 1SFOK 5TMCA 4A3FC 2WB1L 1I50C 4QIWL 2JA5K 3S1MC 3S17C 5C4JK 3GTQK 2A6HA 5C44K 4A3MK 3H0GK 2E2JK 3HOZC 2PMZL 2JA7K 1Y1WC 3S1QK 3GTMK 3PO2K 2NVYK 2YU9K 3S2HK 4A3JC 3S2DC 1TWCK 5C4XK 2E2IK 3PO3C 3GTLC 4Y7NK 4C3JC 3GTOK 4AYBD 3DXJA 4C3HK 4YFNA 2O5IA 4C3IK 3H3VL 2NVTC 5IYDC 1TWAC 1TWHC 1XPPA 4KN7A 4ZH4A 4BBRC 1I3QK 2PA8L 4A3IK 4A93K 3HOWK 2E2HK 4OINA 2NVXK 3CQZK 3HOVK 3GTMC 4G7OA 5C3EC 4C2MK 3GTQC 4X6AK 1TWGK 3GTKK 1K83K 1WCMK 4OIOA 5FLMK 3I4MC 3HKZD 2JA7C 4A3CK 2B63C 4A3BC 3WODA 3PO2C 3EQLA 4BXXC 3S2HC 4Q4ZA 2YU9C 1Y1VK 3GTJC 1BDFA 5IP9K 2R7ZC 3HOXK 4A3LC 5C4XC 4BY7K 2E2IC 4BY1C 4OIQA 1I6HC 3K7AK 3HOYK 1TWFC 3GTOC 3S16C 5IP7K 3I4NC 2WAQD 2JA8K 4G7ZA 4OIPA 3S15K 3GTGC 5IYBK 3M4OK 5M3MK 1ZYRA 3RZOK 3RZDK 5TMFA 4A3EC 2VUMK 4A3IC 4Y52C 1I3QC 3S1RC
chains in the Genus database with same CATH superfamily
3HOVC 1WORA 4C2MC 4WFAS 3HOUK 1J6VA 2Y0SD 3GEEA 1WCMC 1SFOC 1WIHA 5C44C 2R93K 4LJZA 4BKWA 3ADAC 1XXAA 3S1QC 4KM9A 1I50K 3HKZL 4KN4A 1O24A 3K7AC 4A3FK 3S17K 4KAWX 4GTBA 1IS1A 1SFOA 5IYBC 4G7HA 1J98A 3GTQA 4C3HC 4KMUA 2WAQL 1IL2A 4YG2A 1O27A 1WSVA 3FKIK 3SZYA 5HQHA 3FOEA 3LAPA 2FQOA 1TWHK 4A3KK 4X6AC 2O5JA 4XLPA 1Y1VC 4DDQA 3I4MK 2P8TA 2XCOA 1O26A 3CF5S 4WFBS 5M5WK 3FKIC 1PJ6A 1WSRA 2V6UA 3S16K 3I4NK 1Y1VA 3GTGK 3N0CA 4QJVB 4PABA 1O2BA 4GTDA 4YFKA 4A3KC 2NVYA 3M3YC 2D6FC 4A3LK 1KQ4A 3S1RK 2JA6C 2BE5A 1IE0A 4G0WA 1WQGA 3MMLB 5CHPA 5IYDK 1TWAK 3IPJA 5DM6S 4QIWL 2JA5K 3GTMK 3G4CA 4A3MK 3H0GK 3HOZC 4XCHA 1V5VA 1Y1WC 2JA6A 1EH1A 5IOQA 2YU9K 1K83A 1TWCK 4KMHA 2E2IK 3NUHA 4Y7NK 2P5MA 4C3IK 1Y1WA 2NVTC 5IYDC 1TWAC 5DM7S 2CFAB 3N0BA 4P5AA 4WJ4A 1I3QK 1VH2A 2E2HK 4OINA 1X31C 3GTMC 2PHCB 3GTKK 1WOSA 5FLMK 2B63C 4A3BC 3WODA 2YU9C 3TFJA 2R7ZC 2E2IC 4BY1C 1I6HC 5IP7K 1O25A 4G7ZA 4GFQA 3S15K 3BP8C 2RH6A 1YCLA 4M1XA 3RZDK 4Y52C 1I3QC 2R7ZA 3AD8C 4QIWD 4KC6A 1JQWA 5C4JC 3T01A 4A3GK 3AH5A 1GE9A 4KB4A 2A6EA 4KDDA 5TJ3A 3S1MK 4XLNA 3CAGA 3AD9C 3S15C 3S1NK 4IO9S 1BJTA 1J6WA 2JA7A 1IBAA 1ZBSA 2KQ1A 4KATA 5M5YK 4A93C 3CQZC 3OPFA 2ZUFA 3GTOA 4LLGA 1IW7A 2WB1D 5C3EK 5IP9C 3S1NC 1XZQA 4BXXK 3GTJK 3L4KA 1HQMA 1WCMA 3T00A 2A68A 1RU0A 1TWFK 2RGRA 1DCPA 5M5XK 3S2DK 4GZYA 4AYBL 4Y7NC 3H3VD 4GTAA 3HOUC 4A3EK 5IORA 3N3YA 1O2AA 4QJVA 4BBRK 1XZQB 2R93C 5IYCK 3L4JA 4A3FC 4WF9S 1I50C 3S17C 2GAHC 2E2JK 3OREA 2PMZL 4G0VA 4O2DA 2NVYK 3S2DC 2R93A 1FEUA 4KASA 4C45A 5C4XK 5EGHA 1I50A 3SZZA 5HL8A 4AYBD 1EK8A 3LPXA 3QX3A 1TWHC 1XPPA 4ZH4A 2PA8L 4BBRC 2L5NA 1O29A 3GSIA 2NVXK 3FKIA 4G7OA 1TWGK 1K83K 3I4MC 3HKZD 2CFAA 1TWHA 4G0UA 4KM8A 2Y3PA 3HOXK 4BY7K 5C4XC 2JH3A 3TTGA 4OIQA 1O2FB 3HOYK 3S16C 1USMA 3I4NC 2WAQD 2JA8K 3GTGC 5M3MK 1ZYRA 3RZOK 1VJEA 5TMFA 2GSNA 2VUMK 4A3LC 3S1RC 5JVOA 1ISEA 3S14K 2NVXC 4WFNS 1EI6A 5CJ9A 4XSZA 4IOAS 1YX2A 3GDZA 3GIRA 3GTGA 1R9TK 3G4AA 4KB2A 4LQYA 1VRQC 2JA5C 3JSTA 4A3MC 3H0GC 2NVQK 3HOXC 2GSUA 3A8KA 4LK1A 1TWAA 2ZJRS 1TWCC 2R92K 2XCRB 3GTMA 4A3JK 2VUMC 2ZUEA 1VGXA 4C3IC 4YFXA 2B63A 1EQRA 3PO3K 1IQ0A 3GTLK 4C3JK 5HL7S 4WILA 2YU9A 2XCQA 3LAJA 1F7VA 4PAAA 2E2HC 1TWCA 1R9TC 2E2IA 3GTKC 1XXCA 1PJ5A 5FLMC 2Y0SL 2FQTA 1BS2A 3GTPK 3AQOA 2PPBA 4MQ9A 1I3QA 4OIRA 2E2HA 4GT9A 3Q3QA 2R92C 4J3NA 4GTLA 5JFEA 5IP7C 1ZVUA 3A8IA 1YNJA 5M3FK 3RZDC 2GAGC 1ZQ1C 3T02A 1PJ7A 4LK0A 1XXBA 3GTPC 4A3GC 1EFWA 3A8JA 1SFOK 2GSOA 3S1MC 3GTQK 5C44K 1B4AA 4ILDA 1BGWA 3BUEA 3S1QK 3CQZA 1WQHA 3S2HK 4WCES 5JVGS 3VA7A 4C3HK 2ZFZA 2O5IA 1VLOA 3AQPA 4A3IK 4KN7A 1AB4A 3BP3A 4AH6A 3HOWK 1JOEA 3ERED 5C3EC 3GTQC 4X6AK 3S0XA 4A3CK 4BXXC 3S2HC 1Y1VK 2W7VA 3GTJC 4GTCA 1BDFA 1DD5A 3HXAA 1TWFC 4IOCS 3M4OK 4KMAA 4A3EC 4A3IC 3GTJA 4GTEA 3HOWC 1I6VA 3GEIA 4MEYA 1TWFA 4FZBA 3M3YK 3FHZA 2CW0A 5IYCC 4A3CC 2JA6K 2A69A 2KPUA 2V6SA 4BBSK 2E2JC 1INNA 4LR2A 4KMDA 3TFIA 1UV7A 4A3DK 2NVYC 3HOZK 1DCOA 1Y1WK 5D4DA 4RMFA 3M4OC 5IOSA 4P5BA 1O28A 3TFHA 1J6XA 4Q5SA 3PIOS 4XSXA 4U67S 4LOWA 1F93A 3GEHA 1XZPA 2V6TA 1SMYA 2NVTK 4BBSC 1TWGC 1K83C 3OEPA 4JK1A 2PMZD 4A3DC 2EBBA 4BY7C 2B63K 4A3BK 2NVXA 3HOYC 2JA8C 1TWGA 2R7ZK 5FJ8K 4BY1K 2KXYA 1XZPB 1I6HK 4BLAA 4GTFA 3RZOC 2JA5A 5JVHS 3H0GA 3S14C 2PA8D 1YNNA 4Y52K 4MEXA 1JVIA 4NOIA 1ZXOA 2NVQC 2VUMA 2ZJQS 5TMCA 2WB1L 4KARA 5L46A 5C4JK 4FM9A 2A6HA 1F7UA 2JA7K 1L0WA 1R9TA 3PO2K 1C0AA 4A3JC 4BLBA 1DCHA 3GTKA 5IOTA 1HI9A 1WOPA 2ZJPS 3PO3C 3GTLC 1USOA 3LYWA 4C3JC 3FOFA 3GTOK 3DXJA 1F9NA 4YFNA 3H3VL 2R92A 4P9SA 3V4GA 4A93K 3AD7C 5EGEA 3CQZK 3HOVK 4C2MK 3GTLA 2KWAA 1WCMK 4OIOA 2JA7C 1G51A 3PO2C 1B4BA 5E68A 3EQLA 4Q4ZA 3PIPS 5IP9K 3K7AK 3GTPA 3GTOC 4OIPA 2L3UA 5IYBK 3DLLS 4WJ3M 1WQFA 1WOOA
chains in the Genus database with same CATH topology
3HOWC 3S14K 1I6VA 2NVXC 3HOVC 4MEYA 4C2MC 3HOUK 3M3YK 2Y0SD 4XSZA 1WCMC 2JA6K 2CW0A 5IYCC 4QIWD 1SFOC 4A3CC 1R9TK 2A69A 2JA5C 5C4JC 4A3GK 4BBSK 5C44C 4A3MC 3H0GC 2E2JC 2NVQK 2R93K 4LJZA 3HOXC 4A3FK 2A6EA 3S1QC 1I50K 4LK1A 4KN4A 3HKZL 3K7AC 3S17K 3S1MK 4XLNA 4A3DK 2NVYC 3HOZK 3S15C 1Y1WK 1TWCC 3S1NK 5D4DA 5IYBC 4G7HA 2R92K 3M4OC 4Q5SA 4A3JK 4C3HC 2VUMC 4KMUA 2WAQL 4YG2A 4C3IC 4YFXA 4XSXA 3FKIK 3PO3K 3GTLK 4C3JK 5M5YK 4A93C 2E2HC 1SMYA 1R9TC 3CQZC 2NVTK 1TWHK 4BBSC 4X6AC 4A3KK 1TWGC 4LLGA 3GTKC 1K83C 1IW7A 5FLMC 2WB1D 2Y0SL 3GTPK 2O5JA 5C3EK 4JK1A 2PMZD 4XLPA 2PPBA 4A3DC 1Y1VC 4MQ9A 3I4MK 5IP9C 4OIRA 4BY7C 2B63K 3S1NC 4A3BK 2R92C 3HOYC 4BXXK 5IP7C 3GTJK 2JA8C 1HQMA 2R7ZK 5FJ8K 2A68A 5M5WK 4BY1K 1YNJA 1I6HK 3FKIC 1TWFK 3RZOC 5M3FK 3S16K 3RZDC 5M5XK 3I4NK 3S2DK 4GZYA 4AYBL 4Y7NC 3GTGK 3H3VD 3S14C 4QJVB 2PA8D 3HOUC 4YFKA 4A3KC 4A3EK 3M3YC 1YNNA 4A3LK 4Y52K 3S1RK 2JA6C 2BE5A 4LK0A 3GTPC 5IYDK 4MEXA 1TWAK 4A3GC 4NOIA 4QJVA 4BBRK 2NVQC 2R93C 5IYCK 1SFOK 5TMCA 4A3FC 2WB1L 1I50C 4QIWL 2JA5K 3S1MC 3S17C 5C4JK 3GTQK 2A6HA 5C44K 4A3MK 3H0GK 2E2JK 3HOZC 2PMZL 2JA7K 1Y1WC 3S1QK 3GTMK 3PO2K 2NVYK 2YU9K 3S2HK 4A3JC 3S2DC 1TWCK 5C4XK 2E2IK 3PO3C 3GTLC 4Y7NK 4C3JC 3GTOK 4AYBD 3DXJA 4C3HK 4YFNA 2O5IA 4C3IK 3H3VL 2NVTC 5IYDC 1TWAC 1TWHC 1XPPA 4KN7A 4ZH4A 4BBRC 1I3QK 2PA8L 4A3IK 4A93K 3HOWK 2E2HK 4OINA 2NVXK 3CQZK 3HOVK 3GTMC 4G7OA 5C3EC 4C2MK 3GTQC 4X6AK 1TWGK 3GTKK 1K83K 1WCMK 4OIOA 5FLMK 3I4MC 3HKZD 2JA7C 4A3CK 2B63C 4A3BC 3WODA 3PO2C 3EQLA 4BXXC 3S2HC 4Q4ZA 2YU9C 1Y1VK 3GTJC 1BDFA 5IP9K 2R7ZC 3HOXK 4A3LC 5C4XC 4BY7K 2E2IC 4BY1C 4OIQA 1I6HC 3K7AK 3HOYK 1TWFC 3GTOC 3S16C 5IP7K 3I4NC 2WAQD 2JA8K 4G7ZA 4OIPA 3S15K 3GTGC 5IYBK 3M4OK 5M3MK 1ZYRA 3RZOK 3RZDK 5TMFA 4A3EC 2VUMK 4A3IC 4Y52C 1I3QC 3S1RC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3HOW C;  3S14 K;  1I6V A;  2NVX C;  3HOV C;  4MEY A;  4C2M C;  3HOU K;  3M3Y K;  2Y0S D;  4XSZ A;  1WCM C;  2JA6 K;  2CW0 A;  5IYC C;  4QIW D;  1SFO C;  4A3C C;  1R9T K;  2A69 A;  2JA5 C;  5C4J C;  4A3G K;  4BBS K;  5C44 C;  4A3M C;  3H0G C;  2E2J C;  2NVQ K;  2R93 K;  4LJZ A;  3HOX C;  4A3F K;  2A6E A;  3S1Q C;  1I50 K;  4LK1 A;  4KN4 A;  3HKZ L;  3K7A C;  3S17 K;  3S1M K;  4XLN A;  4A3D K;  2NVY C;  3HOZ K;  3S15 C;  1Y1W K;  1TWC C;  3S1N K;  5D4D A;  5IYB C;  4G7H A;  2R92 K;  3M4O C;  4Q5S A;  4A3J K;  4C3H C;  2VUM C;  4KMU A;  2WAQ L;  4YG2 A;  4C3I C;  4YFX A;  4XSX A;  3FKI K;  3PO3 K;  3GTL K;  4C3J K;  5M5Y K;  4A93 C;  2E2H C;  1SMY A;  1R9T C;  3CQZ C;  2NVT K;  1TWH K;  4BBS C;  4X6A C;  4A3K K;  1TWG C;  4LLG A;  3GTK C;  1K83 C;  1IW7 A;  5FLM C;  2WB1 D;  2Y0S L;  3GTP K;  2O5J A;  5C3E K;  4JK1 A;  2PMZ D;  4XLP A;  2PPB A;  4A3D C;  1Y1V C;  4MQ9 A;  3I4M K;  5IP9 C;  4OIR A;  4BY7 C;  2B63 K;  3S1N C;  4A3B K;  2R92 C;  3HOY C;  4BXX K;  5IP7 C;  3GTJ K;  2JA8 C;  1HQM A;  2R7Z K;  5FJ8 K;  2A68 A;  5M5W K;  4BY1 K;  1YNJ A;  1I6H K;  3FKI C;  1TWF K;  3RZO C;  5M3F K;  3S16 K;  3RZD C;  5M5X K;  3I4N K;  3S2D K;  4GZY A;  4AYB L;  4Y7N C;  3GTG K;  3H3V D;  3S14 C;  4QJV B;  2PA8 D;  3HOU C;  4YFK A;  4A3K C;  4A3E K;  3M3Y C;  1YNN A;  4A3L K;  4Y52 K;  3S1R K;  2JA6 C;  2BE5 A;  4LK0 A;  3GTP C;  5IYD K;  4MEX A;  1TWA K;  4A3G C;  4NOI A;  4QJV A;  4BBR K;  2NVQ C;  2R93 C;  5IYC K;  1SFO K;  5TMC A;  4A3F C;  2WB1 L;  1I50 C;  4QIW L;  2JA5 K;  3S1M C;  3S17 C;  5C4J K;  3GTQ K;  2A6H A;  5C44 K;  4A3M K;  3H0G K;  2E2J K;  3HOZ C;  2PMZ L;  2JA7 K;  1Y1W C;  3S1Q K;  3GTM K;  3PO2 K;  2NVY K;  2YU9 K;  3S2H K;  4A3J C;  3S2D C;  1TWC K;  5C4X K;  2E2I K;  3PO3 C;  3GTL C;  4Y7N K;  4C3J C;  3GTO K;  4AYB D;  3DXJ A;  4C3H K;  4YFN A;  2O5I A;  4C3I K;  3H3V L;  2NVT C;  5IYD C;  1TWA C;  1TWH C;  1XPP A;  4KN7 A;  4ZH4 A;  4BBR C;  1I3Q K;  2PA8 L;  4A3I K;  4A93 K;  3HOW K;  2E2H K;  4OIN A;  2NVX K;  3CQZ K;  3HOV K;  3GTM C;  4G7O A;  5C3E C;  4C2M K;  3GTQ C;  4X6A K;  1TWG K;  3GTK K;  1K83 K;  1WCM K;  4OIO A;  5FLM K;  3I4M C;  3HKZ D;  2JA7 C;  4A3C K;  2B63 C;  4A3B C;  3WOD A;  3PO2 C;  3EQL A;  4BXX C;  3S2H C;  4Q4Z A;  2YU9 C;  1Y1V K;  3GTJ C;  1BDF A;  5IP9 K;  2R7Z C;  3HOX K;  4A3L C;  5C4X C;  4BY7 K;  2E2I C;  4BY1 C;  4OIQ A;  1I6H C;  3K7A K;  3HOY K;  1TWF C;  3GTO C;  3S16 C;  5IP7 K;  3I4N C;  2WAQ D;  2JA8 K;  4G7Z A;  4OIP A;  3S15 K;  3GTG C;  5IYB K;  3M4O K;  5M3M K;  1ZYR A;  3RZO K;  3RZD K;  5TMF A;  4A3E C;  2VUM K;  4A3I C;  4Y52 C;  1I3Q C;  3S1R C; 
#chains in the Genus database with same CATH topology
 3HOV C;  1WOR A;  4C2M C;  4WFA S;  3HOU K;  1J6V A;  2Y0S D;  3GEE A;  1WCM C;  1SFO C;  1WIH A;  5C44 C;  2R93 K;  4LJZ A;  4BKW A;  3ADA C;  1XXA A;  3S1Q C;  4KM9 A;  1I50 K;  3HKZ L;  4KN4 A;  1O24 A;  3K7A C;  4A3F K;  3S17 K;  4KAW X;  4GTB A;  1IS1 A;  1SFO A;  5IYB C;  4G7H A;  1J98 A;  3GTQ A;  4C3H C;  4KMU A;  2WAQ L;  1IL2 A;  4YG2 A;  1O27 A;  1WSV A;  3FKI K;  3SZY A;  5HQH A;  3FOE A;  3LAP A;  2FQO A;  1TWH K;  4A3K K;  4X6A C;  2O5J A;  4XLP A;  1Y1V C;  4DDQ A;  3I4M K;  2P8T A;  2XCO A;  1O26 A;  3CF5 S;  4WFB S;  5M5W K;  3FKI C;  1PJ6 A;  1WSR A;  2V6U A;  3S16 K;  3I4N K;  1Y1V A;  3GTG K;  3N0C A;  4QJV B;  4PAB A;  1O2B A;  4GTD A;  4YFK A;  4A3K C;  2NVY A;  3M3Y C;  2D6F C;  4A3L K;  1KQ4 A;  3S1R K;  2JA6 C;  2BE5 A;  1IE0 A;  4G0W A;  1WQG A;  3MML B;  5CHP A;  5IYD K;  1TWA K;  3IPJ A;  5DM6 S;  4QIW L;  2JA5 K;  3GTM K;  3G4C A;  4A3M K;  3H0G K;  3HOZ C;  4XCH A;  1V5V A;  1Y1W C;  2JA6 A;  1EH1 A;  5IOQ A;  2YU9 K;  1K83 A;  1TWC K;  4KMH A;  2E2I K;  3NUH A;  4Y7N K;  2P5M A;  4C3I K;  1Y1W A;  2NVT C;  5IYD C;  1TWA C;  5DM7 S;  2CFA B;  3N0B A;  4P5A A;  4WJ4 A;  1I3Q K;  1VH2 A;  2E2H K;  4OIN A;  1X31 C;  3GTM C;  2PHC B;  3GTK K;  1WOS A;  5FLM K;  2B63 C;  4A3B C;  3WOD A;  2YU9 C;  3TFJ A;  2R7Z C;  2E2I C;  4BY1 C;  1I6H C;  5IP7 K;  1O25 A;  4G7Z A;  4GFQ A;  3S15 K;  3BP8 C;  2RH6 A;  1YCL A;  4M1X A;  3RZD K;  4Y52 C;  1I3Q C;  2R7Z A;  3AD8 C;  4QIW D;  4KC6 A;  1JQW A;  5C4J C;  3T01 A;  4A3G K;  3AH5 A;  1GE9 A;  4KB4 A;  2A6E A;  4KDD A;  5TJ3 A;  3S1M K;  4XLN A;  3CAG A;  3AD9 C;  3S15 C;  3S1N K;  4IO9 S;  1BJT A;  1J6W A;  2JA7 A;  1IBA A;  1ZBS A;  2KQ1 A;  4KAT A;  5M5Y K;  4A93 C;  3CQZ C;  3OPF A;  2ZUF A;  3GTO A;  4LLG A;  1IW7 A;  2WB1 D;  5C3E K;  5IP9 C;  3S1N C;  1XZQ A;  4BXX K;  3GTJ K;  3L4K A;  1HQM A;  1WCM A;  3T00 A;  2A68 A;  1RU0 A;  1TWF K;  2RGR A;  1DCP A;  5M5X K;  3S2D K;  4GZY A;  4AYB L;  4Y7N C;  3H3V D;  4GTA A;  3HOU C;  4A3E K;  5IOR A;  3N3Y A;  1O2A A;  4QJV A;  4BBR K;  1XZQ B;  2R93 C;  5IYC K;  3L4J A;  4A3F C;  4WF9 S;  1I50 C;  3S17 C;  2GAH C;  2E2J K;  3ORE A;  2PMZ L;  4G0V A;  4O2D A;  2NVY K;  3S2D C;  2R93 A;  1FEU A;  4KAS A;  4C45 A;  5C4X K;  5EGH A;  1I50 A;  3SZZ A;  5HL8 A;  4AYB D;  1EK8 A;  3LPX A;  3QX3 A;  1TWH C;  1XPP A;  4ZH4 A;  2PA8 L;  4BBR C;  2L5N A;  1O29 A;  3GSI A;  2NVX K;  3FKI A;  4G7O A;  1TWG K;  1K83 K;  3I4M C;  3HKZ D;  2CFA A;  1TWH A;  4G0U A;  4KM8 A;  2Y3P A;  3HOX K;  4BY7 K;  5C4X C;  2JH3 A;  3TTG A;  4OIQ A;  1O2F B;  3HOY K;  3S16 C;  1USM A;  3I4N C;  2WAQ D;  2JA8 K;  3GTG C;  5M3M K;  1ZYR A;  3RZO K;  1VJE A;  5TMF A;  2GSN A;  2VUM K;  4A3L C;  3S1R C;  5JVO A;  1ISE A;  3S14 K;  2NVX C;  4WFN S;  1EI6 A;  5CJ9 A;  4XSZ A;  4IOA S;  1YX2 A;  3GDZ A;  3GIR A;  3GTG A;  1R9T K;  3G4A A;  4KB2 A;  4LQY A;  1VRQ C;  2JA5 C;  3JST A;  4A3M C;  3H0G C;  2NVQ K;  3HOX C;  2GSU A;  3A8K A;  4LK1 A;  1TWA A;  2ZJR S;  1TWC C;  2R92 K;  2XCR B;  3GTM A;  4A3J K;  2VUM C;  2ZUE A;  1VGX A;  4C3I C;  4YFX A;  2B63 A;  1EQR A;  3PO3 K;  1IQ0 A;  3GTL K;  4C3J K;  5HL7 S;  4WIL A;  2YU9 A;  2XCQ A;  3LAJ A;  1F7V A;  4PAA A;  2E2H C;  1TWC A;  1R9T C;  2E2I A;  3GTK C;  1XXC A;  1PJ5 A;  5FLM C;  2Y0S L;  2FQT A;  1BS2 A;  3GTP K;  3AQO A;  2PPB A;  4MQ9 A;  1I3Q A;  4OIR A;  2E2H A;  4GT9 A;  3Q3Q A;  2R92 C;  4J3N A;  4GTL A;  5JFE A;  5IP7 C;  1ZVU A;  3A8I A;  1YNJ A;  5M3F K;  3RZD C;  2GAG C;  1ZQ1 C;  3T02 A;  1PJ7 A;  4LK0 A;  1XXB A;  3GTP C;  4A3G C;  1EFW A;  3A8J A;  1SFO K;  2GSO A;  3S1M C;  3GTQ K;  5C44 K;  1B4A A;  4ILD A;  1BGW A;  3BUE A;  3S1Q K;  3CQZ A;  1WQH A;  3S2H K;  4WCE S;  5JVG S;  3VA7 A;  4C3H K;  2ZFZ A;  2O5I A;  1VLO A;  3AQP A;  4A3I K;  4KN7 A;  1AB4 A;  3BP3 A;  4AH6 A;  3HOW K;  1JOE A;  3ERE D;  5C3E C;  3GTQ C;  4X6A K;  3S0X A;  4A3C K;  4BXX C;  3S2H C;  1Y1V K;  2W7V A;  3GTJ C;  4GTC A;  1BDF A;  1DD5 A;  3HXA A;  1TWF C;  4IOC S;  3M4O K;  4KMA A;  4A3E C;  4A3I C;  3GTJ A;  4GTE A;  3HOW C;  1I6V A;  3GEI A;  4MEY A;  1TWF A;  4FZB A;  3M3Y K;  3FHZ A;  2CW0 A;  5IYC C;  4A3C C;  2JA6 K;  2A69 A;  2KPU A;  2V6S A;  4BBS K;  2E2J C;  1INN A;  4LR2 A;  4KMD A;  3TFI A;  1UV7 A;  4A3D K;  2NVY C;  3HOZ K;  1DCO A;  1Y1W K;  5D4D A;  4RMF A;  3M4O C;  5IOS A;  4P5B A;  1O28 A;  3TFH A;  1J6X A;  4Q5S A;  3PIO S;  4XSX A;  4U67 S;  4LOW A;  1F93 A;  3GEH A;  1XZP A;  2V6T A;  1SMY A;  2NVT K;  4BBS C;  1TWG C;  1K83 C;  3OEP A;  4JK1 A;  2PMZ D;  4A3D C;  2EBB A;  4BY7 C;  2B63 K;  4A3B K;  2NVX A;  3HOY C;  2JA8 C;  1TWG A;  2R7Z K;  5FJ8 K;  4BY1 K;  2KXY A;  1XZP B;  1I6H K;  4BLA A;  4GTF A;  3RZO C;  2JA5 A;  5JVH S;  3H0G A;  3S14 C;  2PA8 D;  1YNN A;  4Y52 K;  4MEX A;  1JVI A;  4NOI A;  1ZXO A;  2NVQ C;  2VUM A;  2ZJQ S;  5TMC A;  2WB1 L;  4KAR A;  5L46 A;  5C4J K;  4FM9 A;  2A6H A;  1F7U A;  2JA7 K;  1L0W A;  1R9T A;  3PO2 K;  1C0A A;  4A3J C;  4BLB A;  1DCH A;  3GTK A;  5IOT A;  1HI9 A;  1WOP A;  2ZJP S;  3PO3 C;  3GTL C;  1USO A;  3LYW A;  4C3J C;  3FOF A;  3GTO K;  3DXJ A;  1F9N A;  4YFN A;  3H3V L;  2R92 A;  4P9S A;  3V4G A;  4A93 K;  3AD7 C;  5EGE A;  3CQZ K;  3HOV K;  4C2M K;  3GTL A;  2KWA A;  1WCM K;  4OIO A;  2JA7 C;  1G51 A;  3PO2 C;  1B4B A;  5E68 A;  3EQL A;  4Q4Z A;  3PIP S;  5IP9 K;  3K7A K;  3GTP A;  3GTO C;  4OIP A;  2L3U A;  5IYB K;  3DLL S;  4WJ3 M;  1WQF A;  1WOO A; 
#chains in the Genus database with same CATH homology
 3HOW C;  3S14 K;  1I6V A;  2NVX C;  3HOV C;  4MEY A;  4C2M C;  3HOU K;  3M3Y K;  2Y0S D;  4XSZ A;  1WCM C;  2JA6 K;  2CW0 A;  5IYC C;  4QIW D;  1SFO C;  4A3C C;  1R9T K;  2A69 A;  2JA5 C;  5C4J C;  4A3G K;  4BBS K;  5C44 C;  4A3M C;  3H0G C;  2E2J C;  2NVQ K;  2R93 K;  4LJZ A;  3HOX C;  4A3F K;  2A6E A;  3S1Q C;  1I50 K;  4LK1 A;  4KN4 A;  3HKZ L;  3K7A C;  3S17 K;  3S1M K;  4XLN A;  4A3D K;  2NVY C;  3HOZ K;  3S15 C;  1Y1W K;  1TWC C;  3S1N K;  5D4D A;  5IYB C;  4G7H A;  2R92 K;  3M4O C;  4Q5S A;  4A3J K;  4C3H C;  2VUM C;  4KMU A;  2WAQ L;  4YG2 A;  4C3I C;  4YFX A;  4XSX A;  3FKI K;  3PO3 K;  3GTL K;  4C3J K;  5M5Y K;  4A93 C;  2E2H C;  1SMY A;  1R9T C;  3CQZ C;  2NVT K;  1TWH K;  4BBS C;  4X6A C;  4A3K K;  1TWG C;  4LLG A;  3GTK C;  1K83 C;  1IW7 A;  5FLM C;  2WB1 D;  2Y0S L;  3GTP K;  2O5J A;  5C3E K;  4JK1 A;  2PMZ D;  4XLP A;  2PPB A;  4A3D C;  1Y1V C;  4MQ9 A;  3I4M K;  5IP9 C;  4OIR A;  4BY7 C;  2B63 K;  3S1N C;  4A3B K;  2R92 C;  3HOY C;  4BXX K;  5IP7 C;  3GTJ K;  2JA8 C;  1HQM A;  2R7Z K;  5FJ8 K;  2A68 A;  5M5W K;  4BY1 K;  1YNJ A;  1I6H K;  3FKI C;  1TWF K;  3RZO C;  5M3F K;  3S16 K;  3RZD C;  5M5X K;  3I4N K;  3S2D K;  4GZY A;  4AYB L;  4Y7N C;  3GTG K;  3H3V D;  3S14 C;  4QJV B;  2PA8 D;  3HOU C;  4YFK A;  4A3K C;  4A3E K;  3M3Y C;  1YNN A;  4A3L K;  4Y52 K;  3S1R K;  2JA6 C;  2BE5 A;  4LK0 A;  3GTP C;  5IYD K;  4MEX A;  1TWA K;  4A3G C;  4NOI A;  4QJV A;  4BBR K;  2NVQ C;  2R93 C;  5IYC K;  1SFO K;  5TMC A;  4A3F C;  2WB1 L;  1I50 C;  4QIW L;  2JA5 K;  3S1M C;  3S17 C;  5C4J K;  3GTQ K;  2A6H A;  5C44 K;  4A3M K;  3H0G K;  2E2J K;  3HOZ C;  2PMZ L;  2JA7 K;  1Y1W C;  3S1Q K;  3GTM K;  3PO2 K;  2NVY K;  2YU9 K;  3S2H K;  4A3J C;  3S2D C;  1TWC K;  5C4X K;  2E2I K;  3PO3 C;  3GTL C;  4Y7N K;  4C3J C;  3GTO K;  4AYB D;  3DXJ A;  4C3H K;  4YFN A;  2O5I A;  4C3I K;  3H3V L;  2NVT C;  5IYD C;  1TWA C;  1TWH C;  1XPP A;  4KN7 A;  4ZH4 A;  4BBR C;  1I3Q K;  2PA8 L;  4A3I K;  4A93 K;  3HOW K;  2E2H K;  4OIN A;  2NVX K;  3CQZ K;  3HOV K;  3GTM C;  4G7O A;  5C3E C;  4C2M K;  3GTQ C;  4X6A K;  1TWG K;  3GTK K;  1K83 K;  1WCM K;  4OIO A;  5FLM K;  3I4M C;  3HKZ D;  2JA7 C;  4A3C K;  2B63 C;  4A3B C;  3WOD A;  3PO2 C;  3EQL A;  4BXX C;  3S2H C;  4Q4Z A;  2YU9 C;  1Y1V K;  3GTJ C;  1BDF A;  5IP9 K;  2R7Z C;  3HOX K;  4A3L C;  5C4X C;  4BY7 K;  2E2I C;  4BY1 C;  4OIQ A;  1I6H C;  3K7A K;  3HOY K;  1TWF C;  3GTO C;  3S16 C;  5IP7 K;  3I4N C;  2WAQ D;  2JA8 K;  4G7Z A;  4OIP A;  3S15 K;  3GTG C;  5IYB K;  3M4O K;  5M3M K;  1ZYR A;  3RZO K;  3RZD K;  5TMF A;  4A3E C;  2VUM K;  4A3I C;  4Y52 C;  1I3Q C;  3S1R C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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