3S2DC

Rna polymerase ii initiation complex with a 5-nt rna containing a 5br-u
Total Genus 60
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
60
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transcription/rna/dna
molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Initiation complex structure and promoter proofreading.
pubmed doi rcsb
total genus 60
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-05-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3s2dC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3s2dC01
3I4MK 3S15C 4A3IC 2R93C 5IYCK 4A3EK 2JA5K 2PMZD 3RZDK 1SFOK 5IYDK 1I6HC 4BBSC 5M3MK 3GTQK 4BXXK 4YFKA 4C3IK 1TWCC 3S16K 4C3HC 2VUMC 1WCMC 4A3JK 3HOZC 4YFXA 1Y1WK 4MQ9A 1TWFK 4BBRK 1BDFA 3S1NK 2NVTK 3GTGK 5IYCC 1YNJA 3RZDC 1SFOC 5C44K 5TMCA 3HKZL 3S17K 1ZYRA 2WAQL 3PO3K 4X6AK 1HQMA 4MEXA 2BE5A 2A6EA 4XLNA 3GTMC 2JA7C 5IP9K 3S2DK 2A69A 4XSXA 4AYBL 3M3YK 5TMFA 1Y1WC 3S1NC 4Y52K 1Y1VK 3HOUK 5C4XC 3GTPK 4A3FK 3S2HC 3S1MC 5C44C 4QJVA 2R92C 3S17C 2NVXK 5IP7C 2PMZL 2R7ZK 1TWGK 4A3MK 3HOYK 3DXJA 3CQZK 5M5WK 5M5XK 4MEYA 2E2HK 3HOXC 3GTLK 4Y7NK 2O5IA 2NVQC 1IW7A 3GTJK 1Y1VC 4Q4ZA 4QIWD 2B63C 3GTOC 2JA6C 3K7AC 1YNNA 3I4NK 3I4MC 2JA8K 4LK1A 4A3EC 2JA5C 2R7ZC 3HOWK 4BY1K 5C3EK 3RZOK 4LJZA 5IYDC 3H3VD 1K83K 1TWAK 3HOYC 2E2HC 3GTQC 4BXXC 2WB1D 4C3IC 2PPBA 4A3DK 3S16C 2Y0SD 4Y7NC 4QJVB 3S1QK 2PA8D 5C4JK 4A3JC 4OINA 4G7OA 3FKIK 3S1RK 2YU9K 3PO2K 4A3LK 3I4NC 1SMYA 4BBRC 1TWFC 3M4OK 4A3BK 2JA8C 2NVTC 3GTGC 5M5YK 3S14K 3HOWC 1I50K 4BY7K 4BY1C 5IYBK 3RZOC 1I3QK 5FLMK 1TWAC 3PO3C 4X6AC 1TWHK 3EQLA 4A3DC 5IP9C 2E2IK 4XSZA 3S1QC 3S2DC 2YU9C 3PO2C 3FKIC 5FJ8K 1R9TK 2NVYK 4A3LC 4A3KK 3M3YC 4ZH4A 3HOVK 3GTKK 4A93K 4Y52C 4A3BC 4QIWL 3HOUC 3GTPC 4OIPA 4A3FC 3S14C 2CW0A 4BY7C 5M3FK 4A3IK 1I3QC 2R93K 3WODA 2NVXC 1TWHC 1I6HK 4BBSK 4OIRA 1TWGC 4A3MC 4C2MK 3H3VL 5D4DA 4G7HA 4Q5SA 3CQZC 2WB1L 4C3HK 4KMUA 4KN7A 3GTLC 1WCMK 1XPPA 2Y0SL 2PA8L 2VUMK 3GTJC 4A93C 3HOZK 4A3CK 4A3GK 4LLGA 4YFNA 4G7ZA 4OIOA 4OIQA 4C2MC 5C3EC 1I6VA 3H0GK 1K83C 4KN4A 3GTMK 4C3JK 2JA7K 4YG2A 5C4JC 2O5JA 3S1RC 4LK0A 4NOIA 4A3CC 2E2JK 4A3GC 5C4XK 3M4OC 3S1MK 3S2HK 1I50C 5IYBC 3S15K 2R92K 5FLMC 2A6HA 3H0GC 2WAQD 3HKZD 5IP7K 4C3JC 2E2IC 4JK1A 1TWCK 3HOXK 4AYBD 1R9TC 2NVYC 2E2JC 4GZYA 2NVQK 4XLPA 2A68A 4A3KC 3HOVC 2B63K 3GTKC 3GTOK 2JA6K 3K7AK
chains in the Genus database with same CATH superfamily
2GSOA 3A8KA 5HL8A 3PIPS 4G0UA 2JA5K 1USMA 2PMZD 5IYDK 1PJ6A 5M3MK 3T02A 1ZVUA 4C3IK 1EFWA 4KM8A 2VUMC 2PHCB 4A3JK 5HQHA 3HOZC 4MQ9A 3S1NK 1BDFA 2NVTK 5IYCC 1SFOC 3PO3K 2WAQL 2GAHC 4X6AK 1HQMA 4GTDA 4MEXA 5IP9K 5JVGS 1ZQ1C 5JFEA 3LAJA 3L4JA 1Y1VK 1EH1A 3LYWA 3HOUK 2B63A 5EGEA 5C44C 4WF9S 1ZXOA 4A3MK 1SFOA 2L3UA 1F7UA 2ZJPS 5M5WK 3CQZK 3GTQA 3HOXC 3GTLK 2O5IA 3GTJK 4QIWD 1JQWA 1YNNA 4KM9A 2JA5C 3HOWK 5IYDC 1K83K 3HOYC 1O27A 2WB1D 4C3IC 2PPBA 5L46A 3PIOS 2YU9K 4A3JC 4OINA 1J6WA 1WOPA 3I4NC 3AD8C 3GIRA 3OEPA 2JA8C 2NVTC 1I50K 5IYBK 5FLMK 1TWAC 3PO3C 4X6AC 2NVXA 3SZZA 5IP9C 4WJ4A 2V6UA 4G0WA 1YX2A 3FKIC 1JVIA 4GTFA 3HOVK 3GTKK 3HOUC 3S14C 5M3FK 4IO9S 3WODA 4GTBA 1I6HK 4BBSK 4A3MC 4C2MK 4BKWA 3CQZC 4LOWA 5EGHA 3GTLC 1WCMK 2PA8L 4GTEA 3GTJC 1DCOA 4KB4A 3FKIA 4A3GK 3CF5S 4OIOA 1K83C 4KN4A 5JVHS 2ZFZA 1J6XA 3G4CA 1O2AA 3ERED 1I50C 5IYBC 1XXCA 5FLMC 2WAQD 4KMAA 2NVQK 3HOVC 2B63K 3GTKC 1XXBA 3K7AK 4PABA 1BS2A 5IYCK 1SFOK 1I6HC 4BBSC 3VA7A 3GTQK 1XZQA 3S16K 3GTMA 1WCMC 3FOFA 1O29A 2ZJRS 1GE9A 1YNJA 4KMDA 3HXAA 1J98A 5C44K 2V6SA 1G51A 4BLBA 2BE5A 2A6EA 1VLOA 1VRQC 2A69A 4XSXA 3T01A 1USOA 3FOEA 5TMFA 1Y1WC 4Y52K 1XZQB 2JH3A 3GTOA 4KATA 1WSRA 2NVXK 4WJ3M 1F9NA 3HOYK 5M5XK 3A8IA 4MEYA 3CAGA 2D6FC 3N0CA 2NVQC 1IW7A 4P5BA 2B63C 1AB4A 4KB2A 3K7AC 4GTAA 3I4NK 5TJ3A 1Y1WA 2JA8K 4LK1A 3GTGA 2R7ZC 2KXYA 1HI9A 1TWAK 2E2HC 3GTQC 3S16C 1DD5A 4FM9A 2PA8D 5C4JK 3FKIK 1JOEA 1YCLA 3BP8C 5M5YK 3S14K 4KMHA 4BY1C 3RZOC 1DCHA 4LQYA 3EQLA 3LAPA 4A3DC 1ISEA 2R7ZA 1TWGA 1O25A 2E2HA 4A3LC 2ZJQS 4Y52C 2GSUA 4WILA 1I3QC 2EBBA 2NVXC 1TWHC 2RH6A 3H3VL 3ADAC 3T00A 1O28A 2KPUA 1WORA 4KN7A 1XPPA 3TFIA 4A93C 2GSNA 4LLGA 4YFNA 5HL7S 1I3QA 3L4KA 3GDZA 3GTMK 1TWHA 2E2IA 4WFAS 5C4JC 2O5JA 5E68A 4NOIA 4A3CC 2NVYA 1R9TA 5C4XK 1VH2A 3S1MK 5IOQA 1WQFA 2A6HA 2R93A 4C3JC 1BGWA 4JK1A 5DM7S 2E2JC 3AQPA 4XLPA 2ZUFA 3GTOK 3N0BA 3NUHA 3I4MK 1XZPA 4A3EK 4YFKA 2CFAA 2JA7A 4WCES 1DCPA 1PJ7A 1Y1WK 3GTGK 3RZDC 3HKZL 1ZYRA 2R92A 3GTMC 3S2DK 1XZPB 1O2BA 1WIHA 5JVOA 3M3YK 2FQOA 4GTCA 1IQ0A 5C4XC 2CFAB 3S1MC 2JA6A 4U67S 4QJVA 1INNA 3S17C 2XCOA 2R7ZK 5CHPA 1EI6A 1TWGK 4GT9A 1VJEA 2E2HK 3FHZA 4WFNS 3GTOC 1PJ5A 1IL2A 3I4MC 1TWFA 1B4BA 4A3EC 4BY1K 3RZOK 4LJZA 3H3VD 4XCHA 4A3DK 4QJVB 4Y7NC 4O2DA 4A3LK 3DLLS 1XXAA 3GTGC 1WOOA 3GTPA 1I3QK 1TWHK 1O2FB 2E2IK 4XSZA 3S1QC 3S2DC 3Q3QA 3PO2C 1WSVA 5FJ8K 1R9TK 2NVYK 1O26A 3M3YC 4ZH4A 2W7VA 4A93K 5IORA 4A3BC 3GEIA 4BY7C 4OIPA 4A3IK 4KASA 3A8JA 2L5NA 3BP3A 2R93K 4J3NA 5DM6S 4OIRA 1TWGC 3N3YA 4G7HA 3TFJA 2XCRB 4C3HK 4KMUA 1UV7A 2Y0SL 4G0VA 1VGXA 5CJ9A 4A3CK 2KQ1A 3SZYA 1FEUA 1WQGA 4IOCS 5IOSA 1I6VA 4KDDA 2KWAA 4C3JK 2JA7K 2GAGC 3TFHA 4PAAA 4LK0A 2E2JK 4BLAA 4KC6A 3AH5A 3S2HK 4IOAS 3OPFA 4WFBS 2R92K 3H0GC 3HKZD 3LPXA 4GFQA 5IP7K 3JSTA 4ILDA 3GEEA 2E2IC 1R9TC 2NVYC 4GZYA 2VUMA 2A68A 2JA6K 3S15C 4A3IC 2R93C 1B4AA 3MMLB 3TTGA 3RZDK 4M1XA 4KAWX 4BXXK 3H0GA 1TWCC 1O24A 4C3HC 3V4GA 4YFXA 2V6TA 1TWFK 4BBRK 1F7VA 5TMCA 3S17K 4KARA 1X31C 3G4AA 4XLNA 2JA7C 3IPJA 4AYBL 1TWCA 3GSIA 3S1NC 4RMFA 3GTPK 4FZBA 4A3FK 3S2HC 1F93A 2R92C 5IP7C 2PMZL 2ZUEA 2JA5A 3DXJA 4Y7NK 1Y1VC 4Q4ZA 2JA6C 2FQTA 3GEHA 1C0AA 1L0WA 5C3EK 1TWAA 1KQ4A 4BXXC 2Y0SD 3S1QK 4LR2A 3OREA 3PO2K 4G7OA 3S1RK 1SMYA 2Y3PA 4GTLA 4BBRC 1TWFC 3M4OK 4A3BK 1IE0A 1Y1VA 4BY7K 3HOWC 1V5VA 2YU9C 3AQOA 3CQZA 4A3KK 3GTLA 4AH6A 3GTJA 4QIWL 3GTPC 2P8TA 4A3FC 2CW0A 3AD7C 4P5AA 5D4DA 4P9SA 1K83A 4Q5SA 2WB1L 3S0XA 2VUMK 1IS1A 2P5MA 3HOZK 2YU9A 4DDQA 2RGRA 4G7ZA 4OIQA 1J6VA 1I50A 4C2MC 5C3EC 3H0GK 1RU0A 3QX3A 4YG2A 2XCQA 5IOTA 3AD9C 3S1RC 4A3GC 3GTKA 3M4OC 1IBAA 1WOSA 3S15K 1BJTA 3BUEA 1WQHA 1ZBSA 1EQRA 1TWCK 3HOXK 4AYBD 4A3KC 1WCMA 4C45A 1EK8A
chains in the Genus database with same CATH topology
3I4MK 3S15C 4A3IC 2R93C 5IYCK 4A3EK 2JA5K 2PMZD 3RZDK 1SFOK 5IYDK 1I6HC 4BBSC 5M3MK 3GTQK 4BXXK 4YFKA 4C3IK 1TWCC 3S16K 4C3HC 2VUMC 1WCMC 4A3JK 3HOZC 4YFXA 1Y1WK 4MQ9A 1TWFK 4BBRK 1BDFA 3S1NK 2NVTK 3GTGK 5IYCC 1YNJA 3RZDC 1SFOC 5C44K 5TMCA 3HKZL 3S17K 1ZYRA 2WAQL 3PO3K 4X6AK 1HQMA 4MEXA 2BE5A 2A6EA 4XLNA 3GTMC 2JA7C 5IP9K 3S2DK 2A69A 4XSXA 4AYBL 3M3YK 5TMFA 1Y1WC 3S1NC 4Y52K 1Y1VK 3HOUK 5C4XC 3GTPK 4A3FK 3S2HC 3S1MC 5C44C 4QJVA 2R92C 3S17C 2NVXK 5IP7C 2PMZL 2R7ZK 1TWGK 4A3MK 3HOYK 3DXJA 3CQZK 5M5WK 5M5XK 4MEYA 2E2HK 3HOXC 3GTLK 4Y7NK 2O5IA 2NVQC 1IW7A 3GTJK 1Y1VC 4Q4ZA 4QIWD 2B63C 3GTOC 2JA6C 3K7AC 1YNNA 3I4NK 3I4MC 2JA8K 4LK1A 4A3EC 2JA5C 2R7ZC 3HOWK 4BY1K 5C3EK 3RZOK 4LJZA 5IYDC 3H3VD 1K83K 1TWAK 3HOYC 2E2HC 3GTQC 4BXXC 2WB1D 4C3IC 2PPBA 4A3DK 3S16C 2Y0SD 4Y7NC 4QJVB 3S1QK 2PA8D 5C4JK 4A3JC 4OINA 4G7OA 3FKIK 3S1RK 2YU9K 3PO2K 4A3LK 3I4NC 1SMYA 4BBRC 1TWFC 3M4OK 4A3BK 2JA8C 2NVTC 3GTGC 5M5YK 3S14K 3HOWC 1I50K 4BY7K 4BY1C 5IYBK 3RZOC 1I3QK 5FLMK 1TWAC 3PO3C 4X6AC 1TWHK 3EQLA 4A3DC 5IP9C 2E2IK 4XSZA 3S1QC 3S2DC 2YU9C 3PO2C 3FKIC 5FJ8K 1R9TK 2NVYK 4A3LC 4A3KK 3M3YC 4ZH4A 3HOVK 3GTKK 4A93K 4Y52C 4A3BC 4QIWL 3HOUC 3GTPC 4OIPA 4A3FC 3S14C 2CW0A 4BY7C 5M3FK 4A3IK 1I3QC 2R93K 3WODA 2NVXC 1TWHC 1I6HK 4BBSK 4OIRA 1TWGC 4A3MC 4C2MK 3H3VL 5D4DA 4G7HA 4Q5SA 3CQZC 2WB1L 4C3HK 4KMUA 4KN7A 3GTLC 1WCMK 1XPPA 2Y0SL 2PA8L 2VUMK 3GTJC 4A93C 3HOZK 4A3CK 4A3GK 4LLGA 4YFNA 4G7ZA 4OIOA 4OIQA 4C2MC 5C3EC 1I6VA 3H0GK 1K83C 4KN4A 3GTMK 4C3JK 2JA7K 4YG2A 5C4JC 2O5JA 3S1RC 4LK0A 4NOIA 4A3CC 2E2JK 4A3GC 5C4XK 3M4OC 3S1MK 3S2HK 1I50C 5IYBC 3S15K 2R92K 5FLMC 2A6HA 3H0GC 2WAQD 3HKZD 5IP7K 4C3JC 2E2IC 4JK1A 1TWCK 3HOXK 4AYBD 1R9TC 2NVYC 2E2JC 4GZYA 2NVQK 4XLPA 2A68A 4A3KC 3HOVC 2B63K 3GTKC 3GTOK 2JA6K 3K7AK
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3I4M K;  3S15 C;  4A3I C;  2R93 C;  5IYC K;  4A3E K;  2JA5 K;  2PMZ D;  3RZD K;  1SFO K;  5IYD K;  1I6H C;  4BBS C;  5M3M K;  3GTQ K;  4BXX K;  4YFK A;  4C3I K;  1TWC C;  3S16 K;  4C3H C;  2VUM C;  1WCM C;  4A3J K;  3HOZ C;  4YFX A;  1Y1W K;  4MQ9 A;  1TWF K;  4BBR K;  1BDF A;  3S1N K;  2NVT K;  3GTG K;  5IYC C;  1YNJ A;  3RZD C;  1SFO C;  5C44 K;  5TMC A;  3HKZ L;  3S17 K;  1ZYR A;  2WAQ L;  3PO3 K;  4X6A K;  1HQM A;  4MEX A;  2BE5 A;  2A6E A;  4XLN A;  3GTM C;  2JA7 C;  5IP9 K;  3S2D K;  2A69 A;  4XSX A;  4AYB L;  3M3Y K;  5TMF A;  1Y1W C;  3S1N C;  4Y52 K;  1Y1V K;  3HOU K;  5C4X C;  3GTP K;  4A3F K;  3S2H C;  3S1M C;  5C44 C;  4QJV A;  2R92 C;  3S17 C;  2NVX K;  5IP7 C;  2PMZ L;  2R7Z K;  1TWG K;  4A3M K;  3HOY K;  3DXJ A;  3CQZ K;  5M5W K;  5M5X K;  4MEY A;  2E2H K;  3HOX C;  3GTL K;  4Y7N K;  2O5I A;  2NVQ C;  1IW7 A;  3GTJ K;  1Y1V C;  4Q4Z A;  4QIW D;  2B63 C;  3GTO C;  2JA6 C;  3K7A C;  1YNN A;  3I4N K;  3I4M C;  2JA8 K;  4LK1 A;  4A3E C;  2JA5 C;  2R7Z C;  3HOW K;  4BY1 K;  5C3E K;  3RZO K;  4LJZ A;  5IYD C;  3H3V D;  1K83 K;  1TWA K;  3HOY C;  2E2H C;  3GTQ C;  4BXX C;  2WB1 D;  4C3I C;  2PPB A;  4A3D K;  3S16 C;  2Y0S D;  4Y7N C;  4QJV B;  3S1Q K;  2PA8 D;  5C4J K;  4A3J C;  4OIN A;  4G7O A;  3FKI K;  3S1R K;  2YU9 K;  3PO2 K;  4A3L K;  3I4N C;  1SMY A;  4BBR C;  1TWF C;  3M4O K;  4A3B K;  2JA8 C;  2NVT C;  3GTG C;  5M5Y K;  3S14 K;  3HOW C;  1I50 K;  4BY7 K;  4BY1 C;  5IYB K;  3RZO C;  1I3Q K;  5FLM K;  1TWA C;  3PO3 C;  4X6A C;  1TWH K;  3EQL A;  4A3D C;  5IP9 C;  2E2I K;  4XSZ A;  3S1Q C;  3S2D C;  2YU9 C;  3PO2 C;  3FKI C;  5FJ8 K;  1R9T K;  2NVY K;  4A3L C;  4A3K K;  3M3Y C;  4ZH4 A;  3HOV K;  3GTK K;  4A93 K;  4Y52 C;  4A3B C;  4QIW L;  3HOU C;  3GTP C;  4OIP A;  4A3F C;  3S14 C;  2CW0 A;  4BY7 C;  5M3F K;  4A3I K;  1I3Q C;  2R93 K;  3WOD A;  2NVX C;  1TWH C;  1I6H K;  4BBS K;  4OIR A;  1TWG C;  4A3M C;  4C2M K;  3H3V L;  5D4D A;  4G7H A;  4Q5S A;  3CQZ C;  2WB1 L;  4C3H K;  4KMU A;  4KN7 A;  3GTL C;  1WCM K;  1XPP A;  2Y0S L;  2PA8 L;  2VUM K;  3GTJ C;  4A93 C;  3HOZ K;  4A3C K;  4A3G K;  4LLG A;  4YFN A;  4G7Z A;  4OIO A;  4OIQ A;  4C2M C;  5C3E C;  1I6V A;  3H0G K;  1K83 C;  4KN4 A;  3GTM K;  4C3J K;  2JA7 K;  4YG2 A;  5C4J C;  2O5J A;  3S1R C;  4LK0 A;  4NOI A;  4A3C C;  2E2J K;  4A3G C;  5C4X K;  3M4O C;  3S1M K;  3S2H K;  1I50 C;  5IYB C;  3S15 K;  2R92 K;  5FLM C;  2A6H A;  3H0G C;  2WAQ D;  3HKZ D;  5IP7 K;  4C3J C;  2E2I C;  4JK1 A;  1TWC K;  3HOX K;  4AYB D;  1R9T C;  2NVY C;  2E2J C;  4GZY A;  2NVQ K;  4XLP A;  2A68 A;  4A3K C;  3HOV C;  2B63 K;  3GTK C;  3GTO K;  2JA6 K;  3K7A K; 
#chains in the Genus database with same CATH topology
 2GSO A;  3A8K A;  5HL8 A;  3PIP S;  4G0U A;  2JA5 K;  1USM A;  2PMZ D;  5IYD K;  1PJ6 A;  5M3M K;  3T02 A;  1ZVU A;  4C3I K;  1EFW A;  4KM8 A;  2VUM C;  2PHC B;  4A3J K;  5HQH A;  3HOZ C;  4MQ9 A;  3S1N K;  1BDF A;  2NVT K;  5IYC C;  1SFO C;  3PO3 K;  2WAQ L;  2GAH C;  4X6A K;  1HQM A;  4GTD A;  4MEX A;  5IP9 K;  5JVG S;  1ZQ1 C;  5JFE A;  3LAJ A;  3L4J A;  1Y1V K;  1EH1 A;  3LYW A;  3HOU K;  2B63 A;  5EGE A;  5C44 C;  4WF9 S;  1ZXO A;  4A3M K;  1SFO A;  2L3U A;  1F7U A;  2ZJP S;  5M5W K;  3CQZ K;  3GTQ A;  3HOX C;  3GTL K;  2O5I A;  3GTJ K;  4QIW D;  1JQW A;  1YNN A;  4KM9 A;  2JA5 C;  3HOW K;  5IYD C;  1K83 K;  3HOY C;  1O27 A;  2WB1 D;  4C3I C;  2PPB A;  5L46 A;  3PIO S;  2YU9 K;  4A3J C;  4OIN A;  1J6W A;  1WOP A;  3I4N C;  3AD8 C;  3GIR A;  3OEP A;  2JA8 C;  2NVT C;  1I50 K;  5IYB K;  5FLM K;  1TWA C;  3PO3 C;  4X6A C;  2NVX A;  3SZZ A;  5IP9 C;  4WJ4 A;  2V6U A;  4G0W A;  1YX2 A;  3FKI C;  1JVI A;  4GTF A;  3HOV K;  3GTK K;  3HOU C;  3S14 C;  5M3F K;  4IO9 S;  3WOD A;  4GTB A;  1I6H K;  4BBS K;  4A3M C;  4C2M K;  4BKW A;  3CQZ C;  4LOW A;  5EGH A;  3GTL C;  1WCM K;  2PA8 L;  4GTE A;  3GTJ C;  1DCO A;  4KB4 A;  3FKI A;  4A3G K;  3CF5 S;  4OIO A;  1K83 C;  4KN4 A;  5JVH S;  2ZFZ A;  1J6X A;  3G4C A;  1O2A A;  3ERE D;  1I50 C;  5IYB C;  1XXC A;  5FLM C;  2WAQ D;  4KMA A;  2NVQ K;  3HOV C;  2B63 K;  3GTK C;  1XXB A;  3K7A K;  4PAB A;  1BS2 A;  5IYC K;  1SFO K;  1I6H C;  4BBS C;  3VA7 A;  3GTQ K;  1XZQ A;  3S16 K;  3GTM A;  1WCM C;  3FOF A;  1O29 A;  2ZJR S;  1GE9 A;  1YNJ A;  4KMD A;  3HXA A;  1J98 A;  5C44 K;  2V6S A;  1G51 A;  4BLB A;  2BE5 A;  2A6E A;  1VLO A;  1VRQ C;  2A69 A;  4XSX A;  3T01 A;  1USO A;  3FOE A;  5TMF A;  1Y1W C;  4Y52 K;  1XZQ B;  2JH3 A;  3GTO A;  4KAT A;  1WSR A;  2NVX K;  4WJ3 M;  1F9N A;  3HOY K;  5M5X K;  3A8I A;  4MEY A;  3CAG A;  2D6F C;  3N0C A;  2NVQ C;  1IW7 A;  4P5B A;  2B63 C;  1AB4 A;  4KB2 A;  3K7A C;  4GTA A;  3I4N K;  5TJ3 A;  1Y1W A;  2JA8 K;  4LK1 A;  3GTG A;  2R7Z C;  2KXY A;  1HI9 A;  1TWA K;  2E2H C;  3GTQ C;  3S16 C;  1DD5 A;  4FM9 A;  2PA8 D;  5C4J K;  3FKI K;  1JOE A;  1YCL A;  3BP8 C;  5M5Y K;  3S14 K;  4KMH A;  4BY1 C;  3RZO C;  1DCH A;  4LQY A;  3EQL A;  3LAP A;  4A3D C;  1ISE A;  2R7Z A;  1TWG A;  1O25 A;  2E2H A;  4A3L C;  2ZJQ S;  4Y52 C;  2GSU A;  4WIL A;  1I3Q C;  2EBB A;  2NVX C;  1TWH C;  2RH6 A;  3H3V L;  3ADA C;  3T00 A;  1O28 A;  2KPU A;  1WOR A;  4KN7 A;  1XPP A;  3TFI A;  4A93 C;  2GSN A;  4LLG A;  4YFN A;  5HL7 S;  1I3Q A;  3L4K A;  3GDZ A;  3GTM K;  1TWH A;  2E2I A;  4WFA S;  5C4J C;  2O5J A;  5E68 A;  4NOI A;  4A3C C;  2NVY A;  1R9T A;  5C4X K;  1VH2 A;  3S1M K;  5IOQ A;  1WQF A;  2A6H A;  2R93 A;  4C3J C;  1BGW A;  4JK1 A;  5DM7 S;  2E2J C;  3AQP A;  4XLP A;  2ZUF A;  3GTO K;  3N0B A;  3NUH A;  3I4M K;  1XZP A;  4A3E K;  4YFK A;  2CFA A;  2JA7 A;  4WCE S;  1DCP A;  1PJ7 A;  1Y1W K;  3GTG K;  3RZD C;  3HKZ L;  1ZYR A;  2R92 A;  3GTM C;  3S2D K;  1XZP B;  1O2B A;  1WIH A;  5JVO A;  3M3Y K;  2FQO A;  4GTC A;  1IQ0 A;  5C4X C;  2CFA B;  3S1M C;  2JA6 A;  4U67 S;  4QJV A;  1INN A;  3S17 C;  2XCO A;  2R7Z K;  5CHP A;  1EI6 A;  1TWG K;  4GT9 A;  1VJE A;  2E2H K;  3FHZ A;  4WFN S;  3GTO C;  1PJ5 A;  1IL2 A;  3I4M C;  1TWF A;  1B4B A;  4A3E C;  4BY1 K;  3RZO K;  4LJZ A;  3H3V D;  4XCH A;  4A3D K;  4QJV B;  4Y7N C;  4O2D A;  4A3L K;  3DLL S;  1XXA A;  3GTG C;  1WOO A;  3GTP A;  1I3Q K;  1TWH K;  1O2F B;  2E2I K;  4XSZ A;  3S1Q C;  3S2D C;  3Q3Q A;  3PO2 C;  1WSV A;  5FJ8 K;  1R9T K;  2NVY K;  1O26 A;  3M3Y C;  4ZH4 A;  2W7V A;  4A93 K;  5IOR A;  4A3B C;  3GEI A;  4BY7 C;  4OIP A;  4A3I K;  4KAS A;  3A8J A;  2L5N A;  3BP3 A;  2R93 K;  4J3N A;  5DM6 S;  4OIR A;  1TWG C;  3N3Y A;  4G7H A;  3TFJ A;  2XCR B;  4C3H K;  4KMU A;  1UV7 A;  2Y0S L;  4G0V A;  1VGX A;  5CJ9 A;  4A3C K;  2KQ1 A;  3SZY A;  1FEU A;  1WQG A;  4IOC S;  5IOS A;  1I6V A;  4KDD A;  2KWA A;  4C3J K;  2JA7 K;  2GAG C;  3TFH A;  4PAA A;  4LK0 A;  2E2J K;  4BLA A;  4KC6 A;  3AH5 A;  3S2H K;  4IOA S;  3OPF A;  4WFB S;  2R92 K;  3H0G C;  3HKZ D;  3LPX A;  4GFQ A;  5IP7 K;  3JST A;  4ILD A;  3GEE A;  2E2I C;  1R9T C;  2NVY C;  4GZY A;  2VUM A;  2A68 A;  2JA6 K;  3S15 C;  4A3I C;  2R93 C;  1B4A A;  3MML B;  3TTG A;  3RZD K;  4M1X A;  4KAW X;  4BXX K;  3H0G A;  1TWC C;  1O24 A;  4C3H C;  3V4G A;  4YFX A;  2V6T A;  1TWF K;  4BBR K;  1F7V A;  5TMC A;  3S17 K;  4KAR A;  1X31 C;  3G4A A;  4XLN A;  2JA7 C;  3IPJ A;  4AYB L;  1TWC A;  3GSI A;  3S1N C;  4RMF A;  3GTP K;  4FZB A;  4A3F K;  3S2H C;  1F93 A;  2R92 C;  5IP7 C;  2PMZ L;  2ZUE A;  2JA5 A;  3DXJ A;  4Y7N K;  1Y1V C;  4Q4Z A;  2JA6 C;  2FQT A;  3GEH A;  1C0A A;  1L0W A;  5C3E K;  1TWA A;  1KQ4 A;  4BXX C;  2Y0S D;  3S1Q K;  4LR2 A;  3ORE A;  3PO2 K;  4G7O A;  3S1R K;  1SMY A;  2Y3P A;  4GTL A;  4BBR C;  1TWF C;  3M4O K;  4A3B K;  1IE0 A;  1Y1V A;  4BY7 K;  3HOW C;  1V5V A;  2YU9 C;  3AQO A;  3CQZ A;  4A3K K;  3GTL A;  4AH6 A;  3GTJ A;  4QIW L;  3GTP C;  2P8T A;  4A3F C;  2CW0 A;  3AD7 C;  4P5A A;  5D4D A;  4P9S A;  1K83 A;  4Q5S A;  2WB1 L;  3S0X A;  2VUM K;  1IS1 A;  2P5M A;  3HOZ K;  2YU9 A;  4DDQ A;  2RGR A;  4G7Z A;  4OIQ A;  1J6V A;  1I50 A;  4C2M C;  5C3E C;  3H0G K;  1RU0 A;  3QX3 A;  4YG2 A;  2XCQ A;  5IOT A;  3AD9 C;  3S1R C;  4A3G C;  3GTK A;  3M4O C;  1IBA A;  1WOS A;  3S15 K;  1BJT A;  3BUE A;  1WQH A;  1ZBS A;  1EQR A;  1TWC K;  3HOX K;  4AYB D;  4A3K C;  1WCM A;  4C45 A;  1EK8 A; 
#chains in the Genus database with same CATH homology
 3I4M K;  3S15 C;  4A3I C;  2R93 C;  5IYC K;  4A3E K;  2JA5 K;  2PMZ D;  3RZD K;  1SFO K;  5IYD K;  1I6H C;  4BBS C;  5M3M K;  3GTQ K;  4BXX K;  4YFK A;  4C3I K;  1TWC C;  3S16 K;  4C3H C;  2VUM C;  1WCM C;  4A3J K;  3HOZ C;  4YFX A;  1Y1W K;  4MQ9 A;  1TWF K;  4BBR K;  1BDF A;  3S1N K;  2NVT K;  3GTG K;  5IYC C;  1YNJ A;  3RZD C;  1SFO C;  5C44 K;  5TMC A;  3HKZ L;  3S17 K;  1ZYR A;  2WAQ L;  3PO3 K;  4X6A K;  1HQM A;  4MEX A;  2BE5 A;  2A6E A;  4XLN A;  3GTM C;  2JA7 C;  5IP9 K;  3S2D K;  2A69 A;  4XSX A;  4AYB L;  3M3Y K;  5TMF A;  1Y1W C;  3S1N C;  4Y52 K;  1Y1V K;  3HOU K;  5C4X C;  3GTP K;  4A3F K;  3S2H C;  3S1M C;  5C44 C;  4QJV A;  2R92 C;  3S17 C;  2NVX K;  5IP7 C;  2PMZ L;  2R7Z K;  1TWG K;  4A3M K;  3HOY K;  3DXJ A;  3CQZ K;  5M5W K;  5M5X K;  4MEY A;  2E2H K;  3HOX C;  3GTL K;  4Y7N K;  2O5I A;  2NVQ C;  1IW7 A;  3GTJ K;  1Y1V C;  4Q4Z A;  4QIW D;  2B63 C;  3GTO C;  2JA6 C;  3K7A C;  1YNN A;  3I4N K;  3I4M C;  2JA8 K;  4LK1 A;  4A3E C;  2JA5 C;  2R7Z C;  3HOW K;  4BY1 K;  5C3E K;  3RZO K;  4LJZ A;  5IYD C;  3H3V D;  1K83 K;  1TWA K;  3HOY C;  2E2H C;  3GTQ C;  4BXX C;  2WB1 D;  4C3I C;  2PPB A;  4A3D K;  3S16 C;  2Y0S D;  4Y7N C;  4QJV B;  3S1Q K;  2PA8 D;  5C4J K;  4A3J C;  4OIN A;  4G7O A;  3FKI K;  3S1R K;  2YU9 K;  3PO2 K;  4A3L K;  3I4N C;  1SMY A;  4BBR C;  1TWF C;  3M4O K;  4A3B K;  2JA8 C;  2NVT C;  3GTG C;  5M5Y K;  3S14 K;  3HOW C;  1I50 K;  4BY7 K;  4BY1 C;  5IYB K;  3RZO C;  1I3Q K;  5FLM K;  1TWA C;  3PO3 C;  4X6A C;  1TWH K;  3EQL A;  4A3D C;  5IP9 C;  2E2I K;  4XSZ A;  3S1Q C;  3S2D C;  2YU9 C;  3PO2 C;  3FKI C;  5FJ8 K;  1R9T K;  2NVY K;  4A3L C;  4A3K K;  3M3Y C;  4ZH4 A;  3HOV K;  3GTK K;  4A93 K;  4Y52 C;  4A3B C;  4QIW L;  3HOU C;  3GTP C;  4OIP A;  4A3F C;  3S14 C;  2CW0 A;  4BY7 C;  5M3F K;  4A3I K;  1I3Q C;  2R93 K;  3WOD A;  2NVX C;  1TWH C;  1I6H K;  4BBS K;  4OIR A;  1TWG C;  4A3M C;  4C2M K;  3H3V L;  5D4D A;  4G7H A;  4Q5S A;  3CQZ C;  2WB1 L;  4C3H K;  4KMU A;  4KN7 A;  3GTL C;  1WCM K;  1XPP A;  2Y0S L;  2PA8 L;  2VUM K;  3GTJ C;  4A93 C;  3HOZ K;  4A3C K;  4A3G K;  4LLG A;  4YFN A;  4G7Z A;  4OIO A;  4OIQ A;  4C2M C;  5C3E C;  1I6V A;  3H0G K;  1K83 C;  4KN4 A;  3GTM K;  4C3J K;  2JA7 K;  4YG2 A;  5C4J C;  2O5J A;  3S1R C;  4LK0 A;  4NOI A;  4A3C C;  2E2J K;  4A3G C;  5C4X K;  3M4O C;  3S1M K;  3S2H K;  1I50 C;  5IYB C;  3S15 K;  2R92 K;  5FLM C;  2A6H A;  3H0G C;  2WAQ D;  3HKZ D;  5IP7 K;  4C3J C;  2E2I C;  4JK1 A;  1TWC K;  3HOX K;  4AYB D;  1R9T C;  2NVY C;  2E2J C;  4GZY A;  2NVQ K;  4XLP A;  2A68 A;  4A3K C;  3HOV C;  2B63 K;  3GTK C;  3GTO K;  2JA6 K;  3K7A K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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