3HOXC

Complete rna polymerase ii elongation complex v
Total Genus 54
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
54
sequence length
266
structure length
266
Chain Sequence
b'EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD'
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural basis of transcription: mismatch-specific fidelity mechanisms and paused RNA polymerase II with frayed RNA.
pubmed doi rcsb
molecule keywords DNA-directed RNA polymerase II subunit RPB1
molecule tags Transcription,transferase/dna/rna hybrid
total genus 54
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2009-06-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3hoxC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3hoxC01
3HOWK 3I4NC 3FKIC 5IYBC 3S1MC 4BBSK 3HOZC 5FLMC 1WCMC 3S14C 3GTGK 4GZYA 2A6HA 4A3EK 3GTLK 4BBSC 3HOYK 5TMCA 3S2HC 3GTLC 1I3QC 4A3GK 4KN4A 5IP9C 4A3LK 5C4JK 4C3JK 2E2IK 4QIWL 2NVTC 2WB1L 5C4JC 4Q4ZA 3GTMK 2PMZD 1Y1VC 3RZOK 5IP7K 2E2IC 4BBRC 4Y7NK 3S1RC 2JA5K 5TMFA 3GTMC 5IYDK 3S15C 3GTQK 2NVQC 1R9TK 4Y7NC 4A3BK 4A3DK 4X6AK 1TWHK 4XSXA 4MEXA 5IYDC 3GTQC 4JK1A 1SFOK 4A3BC 3GTJC 2R92C 4A3DC 3DXJA 4X6AC 3HOYC 2Y0SL 3RZDK 2VUMK 3HOWC 4XLNA 3CQZK 5IYCK 4A3IK 4AYBL 4A3FK 4A3MK 1SFOC 4NOIA 4XSZA 3RZDC 3GTGC 2VUMC 1TWGK 3CQZC 4A3EC 4A3IC 3H3VL 4A3FC 3S16K 4QIWD 3PO2K 4Q5SA 1BDFA 2WB1D 4YG2A 1K83K 1TWGC 4A93K 5M3MK 4A3GC 1XPPA 1I50K 2E2HK 4A3LC 5M3FK 4MQ9A 3S1QK 3GTKK 1K83C 4C3JC 2PPBA 2R93K 4A93C 4YFKA 4OIQA 2PA8L 4C3IK 3EQLA 3S1NK 1I50C 2A6EA 5M5YK 4BY7K 3RZOC 5IP7C 2JA5C 2JA6K 3M4OK 4G7HA 3K7AK 2CW0A 1TWFK 2Y0SD 3S1NC 3HOVK 2JA8K 2NVXK 4A3CK 4XLPA 1R9TC 2JA6C 4AYBD 4OIPA 1IW7A 1ZYRA 3HOVC 1TWFC 3HOUK 1TWHC 4A3CC 2A69A 1I6HK 4LK1A 4OINA 3PO3K 1TWCK 1Y1WK 5IYCC 2YU9K 2NVYK 2E2JK 4C3HK 5D4DA 4A3MC 3PO3C 1TWCC 2WAQL 4QJVA 4A3KK 4OIRA 2YU9C 3GTOK 4Y52K 2E2JC 3S16C 3PO2C 2PA8D 3I4NK 4LJZA 3FKIK 3S1MK 4KN7A 5FLMK 4A3JK 3HOZK 3I4MK 3M3YK 3HKZL 2B63K 3GTPK 4BY1K 3S14K 5C44K 2E2HC 4YFNA 5M5XK 2R7ZK 3I4MC 3GTKC 4ZH4A 4MEYA 4A3JC 3M3YC 2B63C 4YFXA 2R93C 4C3IC 4BY1C 3GTPC 5M5WK 5C44C 3S2HK 3S2DK 4C2MK 2A68A 4BY7C 1I3QK 2R7ZC 5FJ8K 1TWAC 5IP9K 3M4OC 3K7AC 3H0GK 5C3EK 1SMYA 4KMUA 4LLGA 4C2MC 1HQMA 2NVXC 2JA8C 3S2DC 2NVTK 3H3VD 2O5JA 5C4XK 3HOUC 4G7OA 3H0GC 4OIOA 5C3EC 1Y1VK 2WAQD 4BBRK 3HOXK 3S1RK 2JA7K 4BXXK 1YNJA 4G7ZA 4LK0A 1I6HC 2BE5A 3WODA 5C4XC 3HOXC 2R92K 3S15K 3S1QC 2NVQK 4BXXC 3S17K 2JA7C 1Y1WC 1I6VA 2NVYC 4QJVB 3HKZD 4C3HC 2O5IA 2PMZL 1TWAK 4A3KC 5IYBK 3S17C 3GTJK 1YNNA 3GTOC 1WCMK 4Y52C
chains in the Genus database with same CATH superfamily
5IYBC 4BBSK 1R9TA 2V6TA 4AH6A 2A6HA 4A3EK 3GTLK 4BBSC 4GTLA 1WQGA 3AD9C 4ILDA 3GTLC 3CQZA 1O25A 1O28A 1O29A 2CFAA 3A8KA 4LQYA 3FHZA 2E2IK 4QIWL 3GEEA 2JH3A 4GTFA 2WB1L 4Q4ZA 1Y1VC 2V6SA 2E2IC 4BBRC 1RU0A 4O2DA 3GEHA 1B4BA 2E2HA 3S15C 3GTQK 2NVQC 3T00A 1USMA 3TFHA 1TWHK 4XSXA 4MEXA 3GTQC 3GIRA 5DM7S 5HL7S 3GTJC 4U67S 5IYCK 3GDZA 4A3IK 5DM6S 3GTGC 1TWGK 4A3IC 4Q5SA 4GTAA 2RGRA 3SZZA 1TWGC 4A93K 5M3MK 4IO9S 1XZQB 1F93A 2R93K 4A93C 2GAHC 4YFKA 3GTOA 1J6XA 5M5YK 1WOSA 1XXBA 3ADAC 2XCOA 5IP7C 2JA5C 3K7AK 1O24A 2JA8K 2ZFZA 4AYBD 4OIPA 1ZYRA 3AQOA 2A69A 1V5VA 4G0UA 4M1XA 4OINA 1Y1WK 5EGHA 1YCLA 1WQHA 4A3MC 4C3HK 4A3KK 3ERED 1Y1VA 2E2IA 2JA7A 3FOEA 4Y52K 3S16C 3PO2C 3FKIK 3S1MK 5FLMK 2B63K 3AH5A 1O2AA 4WF9S 3FOFA 3TFJA 3GTQA 3GTKC 1TWAK 3GTJA 2B63C 4KM8A 5M5WK 5FJ8K 2A68A 1TWAC 3GSIA 5IP9K 3M4OC 3GTGA 2ZJQS 2NVXC 2NVTK 1TWGA 1XZPB 3WODA 1I6VA 2NVYC 2JA5A 1YNNA 1WCMK 3LAJA 1FEUA 4P9SA 5IORA 3VA7A 3HOZC 2KPUA 3PIOS 1WCMC 3S14C 4WILA 1EH1A 1ZQ1C 5CJ9A 5TMCA 3S2HC 4WFAS 1I3QC 5C4JK 2W7VA 4BLBA 1DCHA 4KC6A 5JVOA 5C4JC 3GTMK 2EBBA 3PIPS 1O2BA 4GT9A 1VRQC 3GTMC 5IYDK 1VH2A 3GTKA 4A3DK 4X6AK 1ZVUA 5IYDC 3TFIA 1TWAA 1C0AA 4A3DC 2R92C 1USOA 4X6AC 3DXJA 4LOWA 3HOYC 3RZDK 2VUMK 2NVXA 3G4AA 3HXAA 4AYBL 1IS1A 3RZDC 2VUMC 4A3EC 1BJTA 4YG2A 1K83K 2FQOA 2NVYA 1I50K 4KASA 4MQ9A 1K83C 1F9NA 1F7UA 4G0VA 1I50C 4KATA 4WJ4A 5EGEA 3L4JA 3GEIA 2XCRB 3T01A 4G7HA 1O26A 1WCMA 1TWFK 1IL2A 2JA6K 3HOVK 3L4KA 4A3CK 4XLPA 2JA6C 1IW7A 3HOVC 1TWFC 1TWHC 4A3CC 2GAGC 4IOCS 2GSOA 1I3QA 1TWCK 4FM9A 2GSNA 1WIHA 1XZPA 5IYCC 2D6FC 5D4DA 1TWCC 3Q3QA 1WQFA 2PA8D 3I4NK 3QX3A 5IOTA 2R7ZK 4MEYA 2R93C 1J6VA 2R92A 3N3YA 4C2MK 2R7ZC 2ZJPS 3K7AC 4J3NA 3H0GK 5C3EK 2VUMA 2KXYA 4KMUA 2JA8C 4C2MC 3GTLA 1G51A 5C4XK 2ZUFA 3H0GC 5C3EC 2ZUEA 3S1QK 3S1RK 1YNJA 4LK0A 1J98A 4WFBS 5C4XC 3S1QC 1Y1WC 5L46A 4GTEA 4QJVB 4GTCA 3HKZD 4C3HC 4WJ3M 4A3KC 1DCOA 4Y52C 3HOWK 1JOEA 3FKIC 3S1MC 5FLMC 2JA6A 1TWHA 1JQWA 3AD7C 1PJ7A 5IOSA 1XXAA 1EK8A 4A3GK 5IP9C 4A3LK 1TWCA 1HI9A 1O2FB 4C3JK 4KAWX 2CFAB 1EI6A 2GSUA 2NVTC 2XCQA 3RZOK 3OEPA 2PMZD 1B4AA 4Y7NK 1EFWA 1JVIA 1R9TK 4Y7NC 2R93A 4GFQA 4GTDA 2R7ZA 1INNA 3CQZK 1X31C 4NOIA 1IQ0A 3H0GA 4DDQA 3CQZC 3A8JA 1BDFA 2KWAA 1Y1WA 1BGWA 1IBAA 1XZQA 2E2HK 2PPBA 3TTGA 3MMLB 4OIQA 2PA8L 4C3IK 4PABA 3EQLA 3S1NK 4BLAA 2A6EA 3FKIA 4BY7K 2B63A 2CW0A 2Y0SD 3S1NC 2RH6A 3HOUK 1DD5A 5JFEA 1WSVA 1I6HK 3PO3K 3CAGA 2Y3PA 1KQ4A 1YX2A 1AB4A 2YU9K 2E2JK 3PO3C 4QJVA 4OIRA 2YU9C 2L5NA 3GTOK 2E2JC 3DLLS 5JVGS 4LJZA 4KN7A 3I4MK 4A3JK 4C45A 3HKZL 3GTPK 4BY1K 5TJ3A 4YFNA 3I4MC 4A3JC 3GTPC 4BY1C 2L3UA 1EQRA 3S2DK 3NUHA 3IPJA 1UV7A 3S2DC 1WORA 2O5JA 4G7OA 1IE0A 1Y1VK 4KB2A 4KMDA 3HOXK 2WAQD 4BBRK 2JA7K 4G7ZA 2BE5A 3HOXC 3S15K 2NVQK 3S17K 2JA7C 5E68A 2PMZL 4KB4A 3GTMA 2KQ1A 3S17C 1ISEA 3GTJK 5HL8A 3I4NC 1ZXOA 1J6WA 3LPXA 3GTGK 3LYWA 4GZYA 3S0XA 4KDDA 4KARA 4KN4A 3BP8C 4G0WA 2P5MA 4XCHA 2YU9A 3BUEA 4LR2A 5CHPA 1K83A 5IP7K 2JA5K 3S1RC 5TMFA 1I50A 4BKWA 5JVHS 1BS2A 5IOQA 4A3BK 3GTPA 4KMHA 1DCPA 4JK1A 1SFOK 4A3BC 2Y0SL 1TWFA 3HOWC 3LAPA 4XLNA 4A3FK 4A3MK 1SFOC 4XSZA 2P8TA 1O27A 4GTBA 3H3VL 2PHCB 4A3FC 4PAAA 3S16K 4QIWD 2FQTA 3PO2K 1VLOA 2WB1D 1WSRA 4A3GC 1XPPA 4A3LC 5M3FK 1VGXA 3GTKK 4C3JC 4KM9A 1WOPA 3BP3A 3RZOC 4KMAA 4RMFA 3M4OK 4WCES 3V4GA 2NVXK 5HQHA 1R9TC 4LK1A 1XXCA 2V6UA 1VJEA 2NVYK 2WAQL 1WOOA 4IOAS 3A8IA 1ZBSA 1L0WA 3HOZK 3OREA 3M3YK 3S14K 5C44K 2E2HC 5M5XK 4ZH4A 1PJ6A 3M3YC 3AD8C 4YFXA 1GE9A 4C3IC 5C44C 3CF5S 3S2HK 4BY7C 4WFNS 1I3QK 1SFOA 1SMYA 3AQPA 4LLGA 1HQMA 3N0BA 3H3VD 3JSTA 2ZJRS 3HOUC 1F7VA 4OIOA 4BXXK 3SZYA 1I6HC 3OPFA 4BXXC 3T02A 4FZBA 2O5IA 3N0CA 5IYBK 1PJ5A 4P5BA 4P5AA 2R92K 3GTOC 3HOYK 3G4CA
chains in the Genus database with same CATH topology
3HOWK 3I4NC 3FKIC 5IYBC 3S1MC 4BBSK 3HOZC 5FLMC 1WCMC 3S14C 3GTGK 4GZYA 2A6HA 4A3EK 3GTLK 4BBSC 3HOYK 5TMCA 3S2HC 3GTLC 1I3QC 4A3GK 4KN4A 5IP9C 4A3LK 5C4JK 4C3JK 2E2IK 4QIWL 2NVTC 2WB1L 5C4JC 4Q4ZA 3GTMK 2PMZD 1Y1VC 3RZOK 5IP7K 2E2IC 4BBRC 4Y7NK 3S1RC 2JA5K 5TMFA 3GTMC 5IYDK 3S15C 3GTQK 2NVQC 1R9TK 4Y7NC 4A3BK 4A3DK 4X6AK 1TWHK 4XSXA 4MEXA 5IYDC 3GTQC 4JK1A 1SFOK 4A3BC 3GTJC 2R92C 4A3DC 3DXJA 4X6AC 3HOYC 2Y0SL 3RZDK 2VUMK 3HOWC 4XLNA 3CQZK 5IYCK 4A3IK 4AYBL 4A3FK 4A3MK 1SFOC 4NOIA 4XSZA 3RZDC 3GTGC 2VUMC 1TWGK 3CQZC 4A3EC 4A3IC 3H3VL 4A3FC 3S16K 4QIWD 3PO2K 4Q5SA 1BDFA 2WB1D 4YG2A 1K83K 1TWGC 4A93K 5M3MK 4A3GC 1XPPA 1I50K 2E2HK 4A3LC 5M3FK 4MQ9A 3S1QK 3GTKK 1K83C 4C3JC 2PPBA 2R93K 4A93C 4YFKA 4OIQA 2PA8L 4C3IK 3EQLA 3S1NK 1I50C 2A6EA 5M5YK 4BY7K 3RZOC 5IP7C 2JA5C 2JA6K 3M4OK 4G7HA 3K7AK 2CW0A 1TWFK 2Y0SD 3S1NC 3HOVK 2JA8K 2NVXK 4A3CK 4XLPA 1R9TC 2JA6C 4AYBD 4OIPA 1IW7A 1ZYRA 3HOVC 1TWFC 3HOUK 1TWHC 4A3CC 2A69A 1I6HK 4LK1A 4OINA 3PO3K 1TWCK 1Y1WK 5IYCC 2YU9K 2NVYK 2E2JK 4C3HK 5D4DA 4A3MC 3PO3C 1TWCC 2WAQL 4QJVA 4A3KK 4OIRA 2YU9C 3GTOK 4Y52K 2E2JC 3S16C 3PO2C 2PA8D 3I4NK 4LJZA 3FKIK 3S1MK 4KN7A 5FLMK 4A3JK 3HOZK 3I4MK 3M3YK 3HKZL 2B63K 3GTPK 4BY1K 3S14K 5C44K 2E2HC 4YFNA 5M5XK 2R7ZK 3I4MC 3GTKC 4ZH4A 4MEYA 4A3JC 3M3YC 2B63C 4YFXA 2R93C 4C3IC 4BY1C 3GTPC 5M5WK 5C44C 3S2HK 3S2DK 4C2MK 2A68A 4BY7C 1I3QK 2R7ZC 5FJ8K 1TWAC 5IP9K 3M4OC 3K7AC 3H0GK 5C3EK 1SMYA 4KMUA 4LLGA 4C2MC 1HQMA 2NVXC 2JA8C 3S2DC 2NVTK 3H3VD 2O5JA 5C4XK 3HOUC 4G7OA 3H0GC 4OIOA 5C3EC 1Y1VK 2WAQD 4BBRK 3HOXK 3S1RK 2JA7K 4BXXK 1YNJA 4G7ZA 4LK0A 1I6HC 2BE5A 3WODA 5C4XC 3HOXC 2R92K 3S15K 3S1QC 2NVQK 4BXXC 3S17K 2JA7C 1Y1WC 1I6VA 2NVYC 4QJVB 3HKZD 4C3HC 2O5IA 2PMZL 1TWAK 4A3KC 5IYBK 3S17C 3GTJK 1YNNA 3GTOC 1WCMK 4Y52C
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3HOW K;  3I4N C;  3FKI C;  5IYB C;  3S1M C;  4BBS K;  3HOZ C;  5FLM C;  1WCM C;  3S14 C;  3GTG K;  4GZY A;  2A6H A;  4A3E K;  3GTL K;  4BBS C;  3HOY K;  5TMC A;  3S2H C;  3GTL C;  1I3Q C;  4A3G K;  4KN4 A;  5IP9 C;  4A3L K;  5C4J K;  4C3J K;  2E2I K;  4QIW L;  2NVT C;  2WB1 L;  5C4J C;  4Q4Z A;  3GTM K;  2PMZ D;  1Y1V C;  3RZO K;  5IP7 K;  2E2I C;  4BBR C;  4Y7N K;  3S1R C;  2JA5 K;  5TMF A;  3GTM C;  5IYD K;  3S15 C;  3GTQ K;  2NVQ C;  1R9T K;  4Y7N C;  4A3B K;  4A3D K;  4X6A K;  1TWH K;  4XSX A;  4MEX A;  5IYD C;  3GTQ C;  4JK1 A;  1SFO K;  4A3B C;  3GTJ C;  2R92 C;  4A3D C;  3DXJ A;  4X6A C;  3HOY C;  2Y0S L;  3RZD K;  2VUM K;  3HOW C;  4XLN A;  3CQZ K;  5IYC K;  4A3I K;  4AYB L;  4A3F K;  4A3M K;  1SFO C;  4NOI A;  4XSZ A;  3RZD C;  3GTG C;  2VUM C;  1TWG K;  3CQZ C;  4A3E C;  4A3I C;  3H3V L;  4A3F C;  3S16 K;  4QIW D;  3PO2 K;  4Q5S A;  1BDF A;  2WB1 D;  4YG2 A;  1K83 K;  1TWG C;  4A93 K;  5M3M K;  4A3G C;  1XPP A;  1I50 K;  2E2H K;  4A3L C;  5M3F K;  4MQ9 A;  3S1Q K;  3GTK K;  1K83 C;  4C3J C;  2PPB A;  2R93 K;  4A93 C;  4YFK A;  4OIQ A;  2PA8 L;  4C3I K;  3EQL A;  3S1N K;  1I50 C;  2A6E A;  5M5Y K;  4BY7 K;  3RZO C;  5IP7 C;  2JA5 C;  2JA6 K;  3M4O K;  4G7H A;  3K7A K;  2CW0 A;  1TWF K;  2Y0S D;  3S1N C;  3HOV K;  2JA8 K;  2NVX K;  4A3C K;  4XLP A;  1R9T C;  2JA6 C;  4AYB D;  4OIP A;  1IW7 A;  1ZYR A;  3HOV C;  1TWF C;  3HOU K;  1TWH C;  4A3C C;  2A69 A;  1I6H K;  4LK1 A;  4OIN A;  3PO3 K;  1TWC K;  1Y1W K;  5IYC C;  2YU9 K;  2NVY K;  2E2J K;  4C3H K;  5D4D A;  4A3M C;  3PO3 C;  1TWC C;  2WAQ L;  4QJV A;  4A3K K;  4OIR A;  2YU9 C;  3GTO K;  4Y52 K;  2E2J C;  3S16 C;  3PO2 C;  2PA8 D;  3I4N K;  4LJZ A;  3FKI K;  3S1M K;  4KN7 A;  5FLM K;  4A3J K;  3HOZ K;  3I4M K;  3M3Y K;  3HKZ L;  2B63 K;  3GTP K;  4BY1 K;  3S14 K;  5C44 K;  2E2H C;  4YFN A;  5M5X K;  2R7Z K;  3I4M C;  3GTK C;  4ZH4 A;  4MEY A;  4A3J C;  3M3Y C;  2B63 C;  4YFX A;  2R93 C;  4C3I C;  4BY1 C;  3GTP C;  5M5W K;  5C44 C;  3S2H K;  3S2D K;  4C2M K;  2A68 A;  4BY7 C;  1I3Q K;  2R7Z C;  5FJ8 K;  1TWA C;  5IP9 K;  3M4O C;  3K7A C;  3H0G K;  5C3E K;  1SMY A;  4KMU A;  4LLG A;  4C2M C;  1HQM A;  2NVX C;  2JA8 C;  3S2D C;  2NVT K;  3H3V D;  2O5J A;  5C4X K;  3HOU C;  4G7O A;  3H0G C;  4OIO A;  5C3E C;  1Y1V K;  2WAQ D;  4BBR K;  3HOX K;  3S1R K;  2JA7 K;  4BXX K;  1YNJ A;  4G7Z A;  4LK0 A;  1I6H C;  2BE5 A;  3WOD A;  5C4X C;  3HOX C;  2R92 K;  3S15 K;  3S1Q C;  2NVQ K;  4BXX C;  3S17 K;  2JA7 C;  1Y1W C;  1I6V A;  2NVY C;  4QJV B;  3HKZ D;  4C3H C;  2O5I A;  2PMZ L;  1TWA K;  4A3K C;  5IYB K;  3S17 C;  3GTJ K;  1YNN A;  3GTO C;  1WCM K;  4Y52 C; 
#chains in the Genus database with same CATH topology
 5IYB C;  4BBS K;  1R9T A;  2V6T A;  4AH6 A;  2A6H A;  4A3E K;  3GTL K;  4BBS C;  4GTL A;  1WQG A;  3AD9 C;  4ILD A;  3GTL C;  3CQZ A;  1O25 A;  1O28 A;  1O29 A;  2CFA A;  3A8K A;  4LQY A;  3FHZ A;  2E2I K;  4QIW L;  3GEE A;  2JH3 A;  4GTF A;  2WB1 L;  4Q4Z A;  1Y1V C;  2V6S A;  2E2I C;  4BBR C;  1RU0 A;  4O2D A;  3GEH A;  1B4B A;  2E2H A;  3S15 C;  3GTQ K;  2NVQ C;  3T00 A;  1USM A;  3TFH A;  1TWH K;  4XSX A;  4MEX A;  3GTQ C;  3GIR A;  5DM7 S;  5HL7 S;  3GTJ C;  4U67 S;  5IYC K;  3GDZ A;  4A3I K;  5DM6 S;  3GTG C;  1TWG K;  4A3I C;  4Q5S A;  4GTA A;  2RGR A;  3SZZ A;  1TWG C;  4A93 K;  5M3M K;  4IO9 S;  1XZQ B;  1F93 A;  2R93 K;  4A93 C;  2GAH C;  4YFK A;  3GTO A;  1J6X A;  5M5Y K;  1WOS A;  1XXB A;  3ADA C;  2XCO A;  5IP7 C;  2JA5 C;  3K7A K;  1O24 A;  2JA8 K;  2ZFZ A;  4AYB D;  4OIP A;  1ZYR A;  3AQO A;  2A69 A;  1V5V A;  4G0U A;  4M1X A;  4OIN A;  1Y1W K;  5EGH A;  1YCL A;  1WQH A;  4A3M C;  4C3H K;  4A3K K;  3ERE D;  1Y1V A;  2E2I A;  2JA7 A;  3FOE A;  4Y52 K;  3S16 C;  3PO2 C;  3FKI K;  3S1M K;  5FLM K;  2B63 K;  3AH5 A;  1O2A A;  4WF9 S;  3FOF A;  3TFJ A;  3GTQ A;  3GTK C;  1TWA K;  3GTJ A;  2B63 C;  4KM8 A;  5M5W K;  5FJ8 K;  2A68 A;  1TWA C;  3GSI A;  5IP9 K;  3M4O C;  3GTG A;  2ZJQ S;  2NVX C;  2NVT K;  1TWG A;  1XZP B;  3WOD A;  1I6V A;  2NVY C;  2JA5 A;  1YNN A;  1WCM K;  3LAJ A;  1FEU A;  4P9S A;  5IOR A;  3VA7 A;  3HOZ C;  2KPU A;  3PIO S;  1WCM C;  3S14 C;  4WIL A;  1EH1 A;  1ZQ1 C;  5CJ9 A;  5TMC A;  3S2H C;  4WFA S;  1I3Q C;  5C4J K;  2W7V A;  4BLB A;  1DCH A;  4KC6 A;  5JVO A;  5C4J C;  3GTM K;  2EBB A;  3PIP S;  1O2B A;  4GT9 A;  1VRQ C;  3GTM C;  5IYD K;  1VH2 A;  3GTK A;  4A3D K;  4X6A K;  1ZVU A;  5IYD C;  3TFI A;  1TWA A;  1C0A A;  4A3D C;  2R92 C;  1USO A;  4X6A C;  3DXJ A;  4LOW A;  3HOY C;  3RZD K;  2VUM K;  2NVX A;  3G4A A;  3HXA A;  4AYB L;  1IS1 A;  3RZD C;  2VUM C;  4A3E C;  1BJT A;  4YG2 A;  1K83 K;  2FQO A;  2NVY A;  1I50 K;  4KAS A;  4MQ9 A;  1K83 C;  1F9N A;  1F7U A;  4G0V A;  1I50 C;  4KAT A;  4WJ4 A;  5EGE A;  3L4J A;  3GEI A;  2XCR B;  3T01 A;  4G7H A;  1O26 A;  1WCM A;  1TWF K;  1IL2 A;  2JA6 K;  3HOV K;  3L4K A;  4A3C K;  4XLP A;  2JA6 C;  1IW7 A;  3HOV C;  1TWF C;  1TWH C;  4A3C C;  2GAG C;  4IOC S;  2GSO A;  1I3Q A;  1TWC K;  4FM9 A;  2GSN A;  1WIH A;  1XZP A;  5IYC C;  2D6F C;  5D4D A;  1TWC C;  3Q3Q A;  1WQF A;  2PA8 D;  3I4N K;  3QX3 A;  5IOT A;  2R7Z K;  4MEY A;  2R93 C;  1J6V A;  2R92 A;  3N3Y A;  4C2M K;  2R7Z C;  2ZJP S;  3K7A C;  4J3N A;  3H0G K;  5C3E K;  2VUM A;  2KXY A;  4KMU A;  2JA8 C;  4C2M C;  3GTL A;  1G51 A;  5C4X K;  2ZUF A;  3H0G C;  5C3E C;  2ZUE A;  3S1Q K;  3S1R K;  1YNJ A;  4LK0 A;  1J98 A;  4WFB S;  5C4X C;  3S1Q C;  1Y1W C;  5L46 A;  4GTE A;  4QJV B;  4GTC A;  3HKZ D;  4C3H C;  4WJ3 M;  4A3K C;  1DCO A;  4Y52 C;  3HOW K;  1JOE A;  3FKI C;  3S1M C;  5FLM C;  2JA6 A;  1TWH A;  1JQW A;  3AD7 C;  1PJ7 A;  5IOS A;  1XXA A;  1EK8 A;  4A3G K;  5IP9 C;  4A3L K;  1TWC A;  1HI9 A;  1O2F B;  4C3J K;  4KAW X;  2CFA B;  1EI6 A;  2GSU A;  2NVT C;  2XCQ A;  3RZO K;  3OEP A;  2PMZ D;  1B4A A;  4Y7N K;  1EFW A;  1JVI A;  1R9T K;  4Y7N C;  2R93 A;  4GFQ A;  4GTD A;  2R7Z A;  1INN A;  3CQZ K;  1X31 C;  4NOI A;  1IQ0 A;  3H0G A;  4DDQ A;  3CQZ C;  3A8J A;  1BDF A;  2KWA A;  1Y1W A;  1BGW A;  1IBA A;  1XZQ A;  2E2H K;  2PPB A;  3TTG A;  3MML B;  4OIQ A;  2PA8 L;  4C3I K;  4PAB A;  3EQL A;  3S1N K;  4BLA A;  2A6E A;  3FKI A;  4BY7 K;  2B63 A;  2CW0 A;  2Y0S D;  3S1N C;  2RH6 A;  3HOU K;  1DD5 A;  5JFE A;  1WSV A;  1I6H K;  3PO3 K;  3CAG A;  2Y3P A;  1KQ4 A;  1YX2 A;  1AB4 A;  2YU9 K;  2E2J K;  3PO3 C;  4QJV A;  4OIR A;  2YU9 C;  2L5N A;  3GTO K;  2E2J C;  3DLL S;  5JVG S;  4LJZ A;  4KN7 A;  3I4M K;  4A3J K;  4C45 A;  3HKZ L;  3GTP K;  4BY1 K;  5TJ3 A;  4YFN A;  3I4M C;  4A3J C;  3GTP C;  4BY1 C;  2L3U A;  1EQR A;  3S2D K;  3NUH A;  3IPJ A;  1UV7 A;  3S2D C;  1WOR A;  2O5J A;  4G7O A;  1IE0 A;  1Y1V K;  4KB2 A;  4KMD A;  3HOX K;  2WAQ D;  4BBR K;  2JA7 K;  4G7Z A;  2BE5 A;  3HOX C;  3S15 K;  2NVQ K;  3S17 K;  2JA7 C;  5E68 A;  2PMZ L;  4KB4 A;  3GTM A;  2KQ1 A;  3S17 C;  1ISE A;  3GTJ K;  5HL8 A;  3I4N C;  1ZXO A;  1J6W A;  3LPX A;  3GTG K;  3LYW A;  4GZY A;  3S0X A;  4KDD A;  4KAR A;  4KN4 A;  3BP8 C;  4G0W A;  2P5M A;  4XCH A;  2YU9 A;  3BUE A;  4LR2 A;  5CHP A;  1K83 A;  5IP7 K;  2JA5 K;  3S1R C;  5TMF A;  1I50 A;  4BKW A;  5JVH S;  1BS2 A;  5IOQ A;  4A3B K;  3GTP A;  4KMH A;  1DCP A;  4JK1 A;  1SFO K;  4A3B C;  2Y0S L;  1TWF A;  3HOW C;  3LAP A;  4XLN A;  4A3F K;  4A3M K;  1SFO C;  4XSZ A;  2P8T A;  1O27 A;  4GTB A;  3H3V L;  2PHC B;  4A3F C;  4PAA A;  3S16 K;  4QIW D;  2FQT A;  3PO2 K;  1VLO A;  2WB1 D;  1WSR A;  4A3G C;  1XPP A;  4A3L C;  5M3F K;  1VGX A;  3GTK K;  4C3J C;  4KM9 A;  1WOP A;  3BP3 A;  3RZO C;  4KMA A;  4RMF A;  3M4O K;  4WCE S;  3V4G A;  2NVX K;  5HQH A;  1R9T C;  4LK1 A;  1XXC A;  2V6U A;  1VJE A;  2NVY K;  2WAQ L;  1WOO A;  4IOA S;  3A8I A;  1ZBS A;  1L0W A;  3HOZ K;  3ORE A;  3M3Y K;  3S14 K;  5C44 K;  2E2H C;  5M5X K;  4ZH4 A;  1PJ6 A;  3M3Y C;  3AD8 C;  4YFX A;  1GE9 A;  4C3I C;  5C44 C;  3CF5 S;  3S2H K;  4BY7 C;  4WFN S;  1I3Q K;  1SFO A;  1SMY A;  3AQP A;  4LLG A;  1HQM A;  3N0B A;  3H3V D;  3JST A;  2ZJR S;  3HOU C;  1F7V A;  4OIO A;  4BXX K;  3SZY A;  1I6H C;  3OPF A;  4BXX C;  3T02 A;  4FZB A;  2O5I A;  3N0C A;  5IYB K;  1PJ5 A;  4P5B A;  4P5A A;  2R92 K;  3GTO C;  3HOY K;  3G4C A; 
#chains in the Genus database with same CATH homology
 3HOW K;  3I4N C;  3FKI C;  5IYB C;  3S1M C;  4BBS K;  3HOZ C;  5FLM C;  1WCM C;  3S14 C;  3GTG K;  4GZY A;  2A6H A;  4A3E K;  3GTL K;  4BBS C;  3HOY K;  5TMC A;  3S2H C;  3GTL C;  1I3Q C;  4A3G K;  4KN4 A;  5IP9 C;  4A3L K;  5C4J K;  4C3J K;  2E2I K;  4QIW L;  2NVT C;  2WB1 L;  5C4J C;  4Q4Z A;  3GTM K;  2PMZ D;  1Y1V C;  3RZO K;  5IP7 K;  2E2I C;  4BBR C;  4Y7N K;  3S1R C;  2JA5 K;  5TMF A;  3GTM C;  5IYD K;  3S15 C;  3GTQ K;  2NVQ C;  1R9T K;  4Y7N C;  4A3B K;  4A3D K;  4X6A K;  1TWH K;  4XSX A;  4MEX A;  5IYD C;  3GTQ C;  4JK1 A;  1SFO K;  4A3B C;  3GTJ C;  2R92 C;  4A3D C;  3DXJ A;  4X6A C;  3HOY C;  2Y0S L;  3RZD K;  2VUM K;  3HOW C;  4XLN A;  3CQZ K;  5IYC K;  4A3I K;  4AYB L;  4A3F K;  4A3M K;  1SFO C;  4NOI A;  4XSZ A;  3RZD C;  3GTG C;  2VUM C;  1TWG K;  3CQZ C;  4A3E C;  4A3I C;  3H3V L;  4A3F C;  3S16 K;  4QIW D;  3PO2 K;  4Q5S A;  1BDF A;  2WB1 D;  4YG2 A;  1K83 K;  1TWG C;  4A93 K;  5M3M K;  4A3G C;  1XPP A;  1I50 K;  2E2H K;  4A3L C;  5M3F K;  4MQ9 A;  3S1Q K;  3GTK K;  1K83 C;  4C3J C;  2PPB A;  2R93 K;  4A93 C;  4YFK A;  4OIQ A;  2PA8 L;  4C3I K;  3EQL A;  3S1N K;  1I50 C;  2A6E A;  5M5Y K;  4BY7 K;  3RZO C;  5IP7 C;  2JA5 C;  2JA6 K;  3M4O K;  4G7H A;  3K7A K;  2CW0 A;  1TWF K;  2Y0S D;  3S1N C;  3HOV K;  2JA8 K;  2NVX K;  4A3C K;  4XLP A;  1R9T C;  2JA6 C;  4AYB D;  4OIP A;  1IW7 A;  1ZYR A;  3HOV C;  1TWF C;  3HOU K;  1TWH C;  4A3C C;  2A69 A;  1I6H K;  4LK1 A;  4OIN A;  3PO3 K;  1TWC K;  1Y1W K;  5IYC C;  2YU9 K;  2NVY K;  2E2J K;  4C3H K;  5D4D A;  4A3M C;  3PO3 C;  1TWC C;  2WAQ L;  4QJV A;  4A3K K;  4OIR A;  2YU9 C;  3GTO K;  4Y52 K;  2E2J C;  3S16 C;  3PO2 C;  2PA8 D;  3I4N K;  4LJZ A;  3FKI K;  3S1M K;  4KN7 A;  5FLM K;  4A3J K;  3HOZ K;  3I4M K;  3M3Y K;  3HKZ L;  2B63 K;  3GTP K;  4BY1 K;  3S14 K;  5C44 K;  2E2H C;  4YFN A;  5M5X K;  2R7Z K;  3I4M C;  3GTK C;  4ZH4 A;  4MEY A;  4A3J C;  3M3Y C;  2B63 C;  4YFX A;  2R93 C;  4C3I C;  4BY1 C;  3GTP C;  5M5W K;  5C44 C;  3S2H K;  3S2D K;  4C2M K;  2A68 A;  4BY7 C;  1I3Q K;  2R7Z C;  5FJ8 K;  1TWA C;  5IP9 K;  3M4O C;  3K7A C;  3H0G K;  5C3E K;  1SMY A;  4KMU A;  4LLG A;  4C2M C;  1HQM A;  2NVX C;  2JA8 C;  3S2D C;  2NVT K;  3H3V D;  2O5J A;  5C4X K;  3HOU C;  4G7O A;  3H0G C;  4OIO A;  5C3E C;  1Y1V K;  2WAQ D;  4BBR K;  3HOX K;  3S1R K;  2JA7 K;  4BXX K;  1YNJ A;  4G7Z A;  4LK0 A;  1I6H C;  2BE5 A;  3WOD A;  5C4X C;  3HOX C;  2R92 K;  3S15 K;  3S1Q C;  2NVQ K;  4BXX C;  3S17 K;  2JA7 C;  1Y1W C;  1I6V A;  2NVY C;  4QJV B;  3HKZ D;  4C3H C;  2O5I A;  2PMZ L;  1TWA K;  4A3K C;  5IYB K;  3S17 C;  3GTJ K;  1YNN A;  3GTO C;  1WCM K;  4Y52 C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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