1Y1VC

Refined rna polymerase ii-tfiis complex
Total Genus 49
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
49
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Complete RNA polymerase II elongation complex structure and its interactions with NTP and TFIIS.
pubmed doi rcsb
source organism Saccharomyces cerevisiae
molecule tags Transferase/transcription
molecule keywords DNA-directed RNA polymerase II largest subunit
total genus 49
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2004-11-19

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 1y1vC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 1y1vC01
1HQMA 2R93C 1TWAC 3RZOK 2WB1L 5C4XK 2A6HA 1TWFK 5C4JK 2R92K 4A93K 4OINA 3GTGC 4A3BK 3S15C 3S1QC 4C2MK 2JA7K 3H3VD 3EQLA 1R9TK 3GTPK 3DXJA 4YFXA 4LK1A 4OIQA 4XLPA 3HOUC 3PO2K 3WODA 4A3BC 2WAQD 4A3FC 4A3IK 3HOVK 2R7ZC 4XLNA 4A3FK 3GTOK 4BBSC 2WB1D 3HOXK 1I50C 3GTLC 4Q5SA 3HOYK 5M5WK 5C3EK 2YU9K 3S2HK 1YNNA 3S15K 4A3MC 4Y7NC 1IW7A 5C4JC 5IYDC 3M3YC 4YG2A 5D4DA 3HOZK 5IYDK 2A69A 1SFOC 4A3LK 2E2HC 4BY7K 1Y1VC 2E2JC 4KN4A 3GTMC 5IYCC 2Y0SD 4Y52C 2PMZL 5IP7K 5M5YK 1XPPA 3GTOC 4QIWD 1WCMK 3S1NK 4ZH4A 2A6EA 3S1MC 1TWGC 4OIPA 4A3IC 4OIRA 1Y1WK 3HOUK 5IP7C 4Y52K 1I6HK 4MQ9A 4X6AK 2PA8L 4BY7C 2E2HK 4QJVA 3S1QK 1YNJA 3H3VL 1WCMC 3S1NC 4AYBD 4C3HK 4G7ZA 4A3DK 3HKZD 3RZOC 4A3MK 2E2JK 2R93K 2E2IC 3S2DC 3S17K 5C3EC 4A3KC 3S1RC 4BXXC 5C44K 3HOXC 3HOYC 4BBSK 2VUMK 4XSZA 4BBRC 3K7AK 5M3MK 2VUMC 2CW0A 1TWCK 4A3KK 3S1RK 4A3GK 4MEYA 5M3FK 4MEXA 2E2IK 3S2DK 1R9TC 4A3DC 1TWHC 3GTLK 5FLMC 4C2MC 4KN7A 2R92C 3S14C 1TWFC 4X6AC 5TMCA 1TWAK 3GTPC 2PMZD 4A3JK 4JK1A 3GTMK 2NVQC 3I4MC 3FKIC 3H0GK 4A93C 1SFOK 3GTJC 2NVTK 3HOWK 4A3EC 3M3YK 2NVTC 3GTJK 5C44C 3FKIK 4G7HA 4A3CK 4A3LC 3HOZC 3S14K 4Q4ZA 5IP9C 3GTKK 3HOVC 4Y7NK 2JA6C 3I4NC 2YU9C 1TWHK 4AYBL 4KMUA 4C3IC 2B63K 5TMFA 1I50K 2A68A 4LLGA 2B63C 3PO3C 4C3IK 2JA7C 4QIWL 4BY1K 4A3GC 2JA5K 4OIOA 1ZYRA 5FJ8K 3GTGK 2R7ZK 5IP9K 4LJZA 2BE5A 5C4XC 3PO2C 5IYCK 4BXXK 2O5IA 2NVXK 1TWCC 2PPBA 3CQZK 1K83C 2JA8C 5IYBK 3GTQK 3HOWC 3CQZC 4QJVB 4YFKA 2JA5C 4NOIA 3RZDK 1I3QK 2PA8D 3S2HC 3S17C 2NVQK 3I4MK 3PO3K 4A3JC 3HKZL 4XSXA 4C3JK 3S16K 1Y1WC 4C3HC 2WAQL 2JA6K 3I4NK 2NVYC 3M4OC 1SMYA 3S1MK 2O5JA 3GTKC 1I6VA 2NVYK 5M5XK 5FLMK 4BY1C 4C3JC 3S16C 4YFNA 2Y0SL 1I6HC 4GZYA 1Y1VK 1BDFA 3RZDC 4LK0A 1TWGK 3M4OK 4G7OA 3K7AC 4BBRK 4A3EK 5IYBC 3GTQC 1K83K 2JA8K 3H0GC 4A3CC 2NVXC 1I3QC
chains in the Genus database with same CATH superfamily
1HQMA 3JSTA 5HL8A 1TWFK 3AD9C 2KPUA 3LAPA 2R92K 1WQGA 3H3VD 3EQLA 2L3UA 3PO2K 3HOUC 1O2AA 1TWHA 2JA7A 3WODA 2W7VA 4A3IK 3HOVK 1DCOA 1WOSA 1WSVA 3HOXK 3ADAC 1YCLA 1BGWA 1TWGA 3GSIA 2YU9K 1YNNA 1INNA 5D4DA 3LAJA 5IYDK 2A69A 1GE9A 1XPPA 1ZBSA 4QIWD 1WCMK 4ZH4A 4OIPA 4WFAS 2JA5A 1I6HK 4MQ9A 2FQOA 3Q3QA 4WILA 1WSRA 1J6XA 3S1NC 1XXAA 2E2HA 3RZOC 2R93K 2E2IC 3S17K 4A3KC 4GTAA 3HOXC 4FZBA 1JQWA 1TWCK 3N0BA 4A3KK 4A3GK 1V5VA 4MEXA 2E2IK 1TWHC 1VH2A 1XZPB 4M1XA 2R92C 1TWFC 1EK8A 3N3YA 5TMCA 3GTPC 2PMZD 3GTOA 2NVQC 3I4MC 1J6WA 3H0GK 4A93C 3GEHA 2NVTK 4A3EC 3FKIA 2NVTC 3G4CA 5JFEA 1JVIA 4Q4ZA 3CF5S 2ZFZA 5CJ9A 2JA6C 3I4NC 3GDZA 2YU9C 1TWHK 4C3IC 3GEIA 4LLGA 2B63C 4BY1K 1WQFA 4QIWL 4A3GC 1ZYRA 1BS2A 3AH5A 1FEUA 3PO2C 5IYCK 2O5IA 1K83C 2JA8C 5IYBK 4QJVB 2V6UA 2JA5C 4NOIA 4A3JC 3HKZL 3GTKC 1I6VA 1Y1WA 5FLMK 1UV7A 4LK0A 1ZQ1C 3M4OK 4G7OA 3H0GA 3K7AC 5IYBC 1K83K 2JA8K 2A6EA 3LYWA 3AQPA 1TWAC 2WB1L 1TWCA 3FOEA 3AD7C 4KARA 5C4JK 3DLLS 4OINA 1YX2A 3GTPA 3S15C 3S1QC 1VLOA 2ZJRS 5TJ3A 2ZJPS 2WAQD 5IOTA 3GTMA 2R7ZA 4BBSC 2P8TA 5C3EK 2GSOA 3VA7A 1IW7A 1VJEA 3L4JA 1K83A 4YG2A 3HOZK 4RMFA 4A3LK 1USMA 4BY7K 3GEEA 1Y1VC 2E2JC 4KN4A 1ZXOA 4KMDA 1DD5A 4OIRA 5IP7C 4Y52K 2JH3A 4P5BA 1DCHA 2PA8L 3S1QK 1YNJA 4G0VA 4AYBD 4C3HK 1BJTA 3HKZD 4A3MK 1DCPA 4G0WA 4FM9A 5C44K 2CFAA 3HOYC 4XSZA 4XCHA 3K7AK 5M3MK 1ZVUA 2CW0A 2ZUEA 4KMAA 3T00A 1X31C 5EGEA 3S2DK 4GTEA 4A3DC 1WQHA 5FLMC 3N0CA 4A3JK 3QX3A 1J98A 4P9SA 3GTJK 2ZUFA 5C44C 1L0WA 4WJ4A 4G7HA 4A3CK 3AQOA 3HOVC 2D6FC 1USOA 2XCOA 1O29A 4GTBA 5IOSA 2B63K 1I50K 3GTLK 2EBBA 4C3IK 4OIOA 3NUHA 2R7ZK 1WOOA 1O24A 2CFAB 1PJ5A 4BXXK 4KC6A 4DDQA 2R93A 4YFKA 1IL2A 1O25A 4KAWX 2PA8D 2PHCB 1VGXA 2NVQK 3I4MK 1F7VA 3PO3K 3A8JA 4PAAA 3S16K 1Y1WC 2WAQL 3GTKA 2NVYC 1SMYA 3OEPA 2JA6A 2V6SA 4C3JC 2Y0SL 4KM8A 3HXAA 4GTFA 1TWGK 2YU9A 4G0UA 4WFNS 4A3CC 2NVXC 2GAGC 1F7UA 2KQ1A 1I3QC 1RU0A 2R93C 3RZOK 3V4GA 1XZQA 1WIHA 1PJ6A 3GTGC 3IPJA 4A3BK 4C2MK 3SZZA 2JA7K 4LR2A 1R9TK 4YFXA 4OIQA 4LK1A 4GTCA 4XLPA 1R9TA 4A3FC 2NVYA 1EFWA 4XLNA 4A3FK 2WB1D 3T02A 3FOFA 4Y7NC 5IYDC 3TTGA 3M3YC 2VUMA 5JVGS 3A8KA 2E2HC 1AB4A 5IYCC 1TWFA 2E2IA 3MMLB 2PMZL 3S1MC 1TWGC 4A3IC 3HOUK 4LOWA 4X6AK 1G51A 2E2HK 4QJVA 3H3VL 4G7ZA 1VRQC 2L5NA 2NVXA 2E2JK 3L4KA 3S1RC 2VUMK 4BBRC 2VUMC 3S1RK 3ERED 4MEYA 5M3FK 1R9TC 1IS1A 4C2MC 4BLBA 1B4AA 1IQ0A 4KN7A 4ILDA 3S14C 4X6AC 4BKWA 3GTMK 4JK1A 2P5MA 3FKIC 1SFOK 5CHPA 5IOQA 1SFOA 3FKIK 3SZYA 1I3QA 2GAHC 2RH6A 2R92A 2XCQA 4KATA 1XZPA 3S14K 4Y7NK 4GFQA 4AYBL 1O28A 3TFJA 3PO3C 4AH6A 3CAGA 5FJ8K 5IP9K 3PIOS 5C4XC 1WORA 3G4AA 1XXBA 4KMHA 3GTQK 3HOWC 2RGRA 4WCES 3RZDK 1I3QK 3S0XA 4WFBS 4XSXA 1O27A 4GTLA 4C3HC 3S1MK 2O5JA 1HI9A 3A8IA 4BY1C 4YFNA 4GZYA 1BDFA 4IO9S 3RZDC 1IE0A 1EI6A 3GTQC 3LPXA 5L46A 4GTDA 4KDDA 3FHZA 5C4XK 2A6HA 4KM9A 4A93K 5IORA 1F93A 3GTPK 3DXJA 4J3NA 4A3BC 3OREA 1C0AA 3BP8C 2R7ZC 1O2BA 3GTOK 2KXYA 2GSUA 3HOYK 1I50C 3GTLC 4Q5SA 3GIRA 5M5WK 3S2HK 3S15K 4A3MC 5E68A 5C4JC 3BUEA 3GTJA 1EH1A 3GTQA 1SFOC 4KB4A 2ZJQS 4WJ3M 3GTMC 2Y0SD 4Y52C 5JVHS 5IP7K 5M5YK 3GTOC 3S1NK 1O2FB 4WF9S 1Y1WK 1F9NA 1XZQB 3TFIA 2GSNA 4BY7C 3BP3A 1Y1VA 1WCMC 3T01A 3TFHA 4A3DK 3S2DC 5C3EC 1XXCA 4BXXC 4BBSK 4GT9A 1J6VA 5DM7S 5DM6S 2B63A 2XCRB 4IOCS 2Y3PA 4U67S 4BLAA 1TWAK 1B4BA 3GTJC 3HOWK 3M3YK 3CQZA 3PIPS 4IOAS 4A3LC 4KB2A 5HQHA 3HOZC 5IP9C 3GTKK 1I50A 3GTLA 4KMUA 5TMFA 2A68A 2JA7C 1EQRA 2JA5K 3GTGK 5JVOA 4LJZA 1TWAA 2BE5A 1IBAA 2NVXK 1TWCC 2PPBA 3CQZK 2FQTA 3CQZC 3AD8C 3OPFA 1ISEA 3S2HC 3S17C 5HL7S 1WOPA 1O26A 4C3JK 1WCMA 2JA6K 3I4NK 3M4OC 2V6TA 2NVYK 5EGHA 4LQYA 5M5XK 1PJ7A 3S16C 1I6HC 4O2DA 4P5AA 1Y1VK 3GTGA 4BBRK 4KASA 4A3EK 1KQ4A 4C45A 3H0GC 4PABA 2KWAA 1JOEA
chains in the Genus database with same CATH topology
1HQMA 2R93C 1TWAC 3RZOK 2WB1L 5C4XK 2A6HA 1TWFK 5C4JK 2R92K 4A93K 4OINA 3GTGC 4A3BK 3S15C 3S1QC 4C2MK 2JA7K 3H3VD 3EQLA 1R9TK 3GTPK 3DXJA 4YFXA 4LK1A 4OIQA 4XLPA 3HOUC 3PO2K 3WODA 4A3BC 2WAQD 4A3FC 4A3IK 3HOVK 2R7ZC 4XLNA 4A3FK 3GTOK 4BBSC 2WB1D 3HOXK 1I50C 3GTLC 4Q5SA 3HOYK 5M5WK 5C3EK 2YU9K 3S2HK 1YNNA 3S15K 4A3MC 4Y7NC 1IW7A 5C4JC 5IYDC 3M3YC 4YG2A 5D4DA 3HOZK 5IYDK 2A69A 1SFOC 4A3LK 2E2HC 4BY7K 1Y1VC 2E2JC 4KN4A 3GTMC 5IYCC 2Y0SD 4Y52C 2PMZL 5IP7K 5M5YK 1XPPA 3GTOC 4QIWD 1WCMK 3S1NK 4ZH4A 2A6EA 3S1MC 1TWGC 4OIPA 4A3IC 4OIRA 1Y1WK 3HOUK 5IP7C 4Y52K 1I6HK 4MQ9A 4X6AK 2PA8L 4BY7C 2E2HK 4QJVA 3S1QK 1YNJA 3H3VL 1WCMC 3S1NC 4AYBD 4C3HK 4G7ZA 4A3DK 3HKZD 3RZOC 4A3MK 2E2JK 2R93K 2E2IC 3S2DC 3S17K 5C3EC 4A3KC 3S1RC 4BXXC 5C44K 3HOXC 3HOYC 4BBSK 2VUMK 4XSZA 4BBRC 3K7AK 5M3MK 2VUMC 2CW0A 1TWCK 4A3KK 3S1RK 4A3GK 4MEYA 5M3FK 4MEXA 2E2IK 3S2DK 1R9TC 4A3DC 1TWHC 3GTLK 5FLMC 4C2MC 4KN7A 2R92C 3S14C 1TWFC 4X6AC 5TMCA 1TWAK 3GTPC 2PMZD 4A3JK 4JK1A 3GTMK 2NVQC 3I4MC 3FKIC 3H0GK 4A93C 1SFOK 3GTJC 2NVTK 3HOWK 4A3EC 3M3YK 2NVTC 3GTJK 5C44C 3FKIK 4G7HA 4A3CK 4A3LC 3HOZC 3S14K 4Q4ZA 5IP9C 3GTKK 3HOVC 4Y7NK 2JA6C 3I4NC 2YU9C 1TWHK 4AYBL 4KMUA 4C3IC 2B63K 5TMFA 1I50K 2A68A 4LLGA 2B63C 3PO3C 4C3IK 2JA7C 4QIWL 4BY1K 4A3GC 2JA5K 4OIOA 1ZYRA 5FJ8K 3GTGK 2R7ZK 5IP9K 4LJZA 2BE5A 5C4XC 3PO2C 5IYCK 4BXXK 2O5IA 2NVXK 1TWCC 2PPBA 3CQZK 1K83C 2JA8C 5IYBK 3GTQK 3HOWC 3CQZC 4QJVB 4YFKA 2JA5C 4NOIA 3RZDK 1I3QK 2PA8D 3S2HC 3S17C 2NVQK 3I4MK 3PO3K 4A3JC 3HKZL 4XSXA 4C3JK 3S16K 1Y1WC 4C3HC 2WAQL 2JA6K 3I4NK 2NVYC 3M4OC 1SMYA 3S1MK 2O5JA 3GTKC 1I6VA 2NVYK 5M5XK 5FLMK 4BY1C 4C3JC 3S16C 4YFNA 2Y0SL 1I6HC 4GZYA 1Y1VK 1BDFA 3RZDC 4LK0A 1TWGK 3M4OK 4G7OA 3K7AC 4BBRK 4A3EK 5IYBC 3GTQC 1K83K 2JA8K 3H0GC 4A3CC 2NVXC 1I3QC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1HQM A;  2R93 C;  1TWA C;  3RZO K;  2WB1 L;  5C4X K;  2A6H A;  1TWF K;  5C4J K;  2R92 K;  4A93 K;  4OIN A;  3GTG C;  4A3B K;  3S15 C;  3S1Q C;  4C2M K;  2JA7 K;  3H3V D;  3EQL A;  1R9T K;  3GTP K;  3DXJ A;  4YFX A;  4LK1 A;  4OIQ A;  4XLP A;  3HOU C;  3PO2 K;  3WOD A;  4A3B C;  2WAQ D;  4A3F C;  4A3I K;  3HOV K;  2R7Z C;  4XLN A;  4A3F K;  3GTO K;  4BBS C;  2WB1 D;  3HOX K;  1I50 C;  3GTL C;  4Q5S A;  3HOY K;  5M5W K;  5C3E K;  2YU9 K;  3S2H K;  1YNN A;  3S15 K;  4A3M C;  4Y7N C;  1IW7 A;  5C4J C;  5IYD C;  3M3Y C;  4YG2 A;  5D4D A;  3HOZ K;  5IYD K;  2A69 A;  1SFO C;  4A3L K;  2E2H C;  4BY7 K;  1Y1V C;  2E2J C;  4KN4 A;  3GTM C;  5IYC C;  2Y0S D;  4Y52 C;  2PMZ L;  5IP7 K;  5M5Y K;  1XPP A;  3GTO C;  4QIW D;  1WCM K;  3S1N K;  4ZH4 A;  2A6E A;  3S1M C;  1TWG C;  4OIP A;  4A3I C;  4OIR A;  1Y1W K;  3HOU K;  5IP7 C;  4Y52 K;  1I6H K;  4MQ9 A;  4X6A K;  2PA8 L;  4BY7 C;  2E2H K;  4QJV A;  3S1Q K;  1YNJ A;  3H3V L;  1WCM C;  3S1N C;  4AYB D;  4C3H K;  4G7Z A;  4A3D K;  3HKZ D;  3RZO C;  4A3M K;  2E2J K;  2R93 K;  2E2I C;  3S2D C;  3S17 K;  5C3E C;  4A3K C;  3S1R C;  4BXX C;  5C44 K;  3HOX C;  3HOY C;  4BBS K;  2VUM K;  4XSZ A;  4BBR C;  3K7A K;  5M3M K;  2VUM C;  2CW0 A;  1TWC K;  4A3K K;  3S1R K;  4A3G K;  4MEY A;  5M3F K;  4MEX A;  2E2I K;  3S2D K;  1R9T C;  4A3D C;  1TWH C;  3GTL K;  5FLM C;  4C2M C;  4KN7 A;  2R92 C;  3S14 C;  1TWF C;  4X6A C;  5TMC A;  1TWA K;  3GTP C;  2PMZ D;  4A3J K;  4JK1 A;  3GTM K;  2NVQ C;  3I4M C;  3FKI C;  3H0G K;  4A93 C;  1SFO K;  3GTJ C;  2NVT K;  3HOW K;  4A3E C;  3M3Y K;  2NVT C;  3GTJ K;  5C44 C;  3FKI K;  4G7H A;  4A3C K;  4A3L C;  3HOZ C;  3S14 K;  4Q4Z A;  5IP9 C;  3GTK K;  3HOV C;  4Y7N K;  2JA6 C;  3I4N C;  2YU9 C;  1TWH K;  4AYB L;  4KMU A;  4C3I C;  2B63 K;  5TMF A;  1I50 K;  2A68 A;  4LLG A;  2B63 C;  3PO3 C;  4C3I K;  2JA7 C;  4QIW L;  4BY1 K;  4A3G C;  2JA5 K;  4OIO A;  1ZYR A;  5FJ8 K;  3GTG K;  2R7Z K;  5IP9 K;  4LJZ A;  2BE5 A;  5C4X C;  3PO2 C;  5IYC K;  4BXX K;  2O5I A;  2NVX K;  1TWC C;  2PPB A;  3CQZ K;  1K83 C;  2JA8 C;  5IYB K;  3GTQ K;  3HOW C;  3CQZ C;  4QJV B;  4YFK A;  2JA5 C;  4NOI A;  3RZD K;  1I3Q K;  2PA8 D;  3S2H C;  3S17 C;  2NVQ K;  3I4M K;  3PO3 K;  4A3J C;  3HKZ L;  4XSX A;  4C3J K;  3S16 K;  1Y1W C;  4C3H C;  2WAQ L;  2JA6 K;  3I4N K;  2NVY C;  3M4O C;  1SMY A;  3S1M K;  2O5J A;  3GTK C;  1I6V A;  2NVY K;  5M5X K;  5FLM K;  4BY1 C;  4C3J C;  3S16 C;  4YFN A;  2Y0S L;  1I6H C;  4GZY A;  1Y1V K;  1BDF A;  3RZD C;  4LK0 A;  1TWG K;  3M4O K;  4G7O A;  3K7A C;  4BBR K;  4A3E K;  5IYB C;  3GTQ C;  1K83 K;  2JA8 K;  3H0G C;  4A3C C;  2NVX C;  1I3Q C; 
#chains in the Genus database with same CATH topology
 1HQM A;  3JST A;  5HL8 A;  1TWF K;  3AD9 C;  2KPU A;  3LAP A;  2R92 K;  1WQG A;  3H3V D;  3EQL A;  2L3U A;  3PO2 K;  3HOU C;  1O2A A;  1TWH A;  2JA7 A;  3WOD A;  2W7V A;  4A3I K;  3HOV K;  1DCO A;  1WOS A;  1WSV A;  3HOX K;  3ADA C;  1YCL A;  1BGW A;  1TWG A;  3GSI A;  2YU9 K;  1YNN A;  1INN A;  5D4D A;  3LAJ A;  5IYD K;  2A69 A;  1GE9 A;  1XPP A;  1ZBS A;  4QIW D;  1WCM K;  4ZH4 A;  4OIP A;  4WFA S;  2JA5 A;  1I6H K;  4MQ9 A;  2FQO A;  3Q3Q A;  4WIL A;  1WSR A;  1J6X A;  3S1N C;  1XXA A;  2E2H A;  3RZO C;  2R93 K;  2E2I C;  3S17 K;  4A3K C;  4GTA A;  3HOX C;  4FZB A;  1JQW A;  1TWC K;  3N0B A;  4A3K K;  4A3G K;  1V5V A;  4MEX A;  2E2I K;  1TWH C;  1VH2 A;  1XZP B;  4M1X A;  2R92 C;  1TWF C;  1EK8 A;  3N3Y A;  5TMC A;  3GTP C;  2PMZ D;  3GTO A;  2NVQ C;  3I4M C;  1J6W A;  3H0G K;  4A93 C;  3GEH A;  2NVT K;  4A3E C;  3FKI A;  2NVT C;  3G4C A;  5JFE A;  1JVI A;  4Q4Z A;  3CF5 S;  2ZFZ A;  5CJ9 A;  2JA6 C;  3I4N C;  3GDZ A;  2YU9 C;  1TWH K;  4C3I C;  3GEI A;  4LLG A;  2B63 C;  4BY1 K;  1WQF A;  4QIW L;  4A3G C;  1ZYR A;  1BS2 A;  3AH5 A;  1FEU A;  3PO2 C;  5IYC K;  2O5I A;  1K83 C;  2JA8 C;  5IYB K;  4QJV B;  2V6U A;  2JA5 C;  4NOI A;  4A3J C;  3HKZ L;  3GTK C;  1I6V A;  1Y1W A;  5FLM K;  1UV7 A;  4LK0 A;  1ZQ1 C;  3M4O K;  4G7O A;  3H0G A;  3K7A C;  5IYB C;  1K83 K;  2JA8 K;  2A6E A;  3LYW A;  3AQP A;  1TWA C;  2WB1 L;  1TWC A;  3FOE A;  3AD7 C;  4KAR A;  5C4J K;  3DLL S;  4OIN A;  1YX2 A;  3GTP A;  3S15 C;  3S1Q C;  1VLO A;  2ZJR S;  5TJ3 A;  2ZJP S;  2WAQ D;  5IOT A;  3GTM A;  2R7Z A;  4BBS C;  2P8T A;  5C3E K;  2GSO A;  3VA7 A;  1IW7 A;  1VJE A;  3L4J A;  1K83 A;  4YG2 A;  3HOZ K;  4RMF A;  4A3L K;  1USM A;  4BY7 K;  3GEE A;  1Y1V C;  2E2J C;  4KN4 A;  1ZXO A;  4KMD A;  1DD5 A;  4OIR A;  5IP7 C;  4Y52 K;  2JH3 A;  4P5B A;  1DCH A;  2PA8 L;  3S1Q K;  1YNJ A;  4G0V A;  4AYB D;  4C3H K;  1BJT A;  3HKZ D;  4A3M K;  1DCP A;  4G0W A;  4FM9 A;  5C44 K;  2CFA A;  3HOY C;  4XSZ A;  4XCH A;  3K7A K;  5M3M K;  1ZVU A;  2CW0 A;  2ZUE A;  4KMA A;  3T00 A;  1X31 C;  5EGE A;  3S2D K;  4GTE A;  4A3D C;  1WQH A;  5FLM C;  3N0C A;  4A3J K;  3QX3 A;  1J98 A;  4P9S A;  3GTJ K;  2ZUF A;  5C44 C;  1L0W A;  4WJ4 A;  4G7H A;  4A3C K;  3AQO A;  3HOV C;  2D6F C;  1USO A;  2XCO A;  1O29 A;  4GTB A;  5IOS A;  2B63 K;  1I50 K;  3GTL K;  2EBB A;  4C3I K;  4OIO A;  3NUH A;  2R7Z K;  1WOO A;  1O24 A;  2CFA B;  1PJ5 A;  4BXX K;  4KC6 A;  4DDQ A;  2R93 A;  4YFK A;  1IL2 A;  1O25 A;  4KAW X;  2PA8 D;  2PHC B;  1VGX A;  2NVQ K;  3I4M K;  1F7V A;  3PO3 K;  3A8J A;  4PAA A;  3S16 K;  1Y1W C;  2WAQ L;  3GTK A;  2NVY C;  1SMY A;  3OEP A;  2JA6 A;  2V6S A;  4C3J C;  2Y0S L;  4KM8 A;  3HXA A;  4GTF A;  1TWG K;  2YU9 A;  4G0U A;  4WFN S;  4A3C C;  2NVX C;  2GAG C;  1F7U A;  2KQ1 A;  1I3Q C;  1RU0 A;  2R93 C;  3RZO K;  3V4G A;  1XZQ A;  1WIH A;  1PJ6 A;  3GTG C;  3IPJ A;  4A3B K;  4C2M K;  3SZZ A;  2JA7 K;  4LR2 A;  1R9T K;  4YFX A;  4OIQ A;  4LK1 A;  4GTC A;  4XLP A;  1R9T A;  4A3F C;  2NVY A;  1EFW A;  4XLN A;  4A3F K;  2WB1 D;  3T02 A;  3FOF A;  4Y7N C;  5IYD C;  3TTG A;  3M3Y C;  2VUM A;  5JVG S;  3A8K A;  2E2H C;  1AB4 A;  5IYC C;  1TWF A;  2E2I A;  3MML B;  2PMZ L;  3S1M C;  1TWG C;  4A3I C;  3HOU K;  4LOW A;  4X6A K;  1G51 A;  2E2H K;  4QJV A;  3H3V L;  4G7Z A;  1VRQ C;  2L5N A;  2NVX A;  2E2J K;  3L4K A;  3S1R C;  2VUM K;  4BBR C;  2VUM C;  3S1R K;  3ERE D;  4MEY A;  5M3F K;  1R9T C;  1IS1 A;  4C2M C;  4BLB A;  1B4A A;  1IQ0 A;  4KN7 A;  4ILD A;  3S14 C;  4X6A C;  4BKW A;  3GTM K;  4JK1 A;  2P5M A;  3FKI C;  1SFO K;  5CHP A;  5IOQ A;  1SFO A;  3FKI K;  3SZY A;  1I3Q A;  2GAH C;  2RH6 A;  2R92 A;  2XCQ A;  4KAT A;  1XZP A;  3S14 K;  4Y7N K;  4GFQ A;  4AYB L;  1O28 A;  3TFJ A;  3PO3 C;  4AH6 A;  3CAG A;  5FJ8 K;  5IP9 K;  3PIO S;  5C4X C;  1WOR A;  3G4A A;  1XXB A;  4KMH A;  3GTQ K;  3HOW C;  2RGR A;  4WCE S;  3RZD K;  1I3Q K;  3S0X A;  4WFB S;  4XSX A;  1O27 A;  4GTL A;  4C3H C;  3S1M K;  2O5J A;  1HI9 A;  3A8I A;  4BY1 C;  4YFN A;  4GZY A;  1BDF A;  4IO9 S;  3RZD C;  1IE0 A;  1EI6 A;  3GTQ C;  3LPX A;  5L46 A;  4GTD A;  4KDD A;  3FHZ A;  5C4X K;  2A6H A;  4KM9 A;  4A93 K;  5IOR A;  1F93 A;  3GTP K;  3DXJ A;  4J3N A;  4A3B C;  3ORE A;  1C0A A;  3BP8 C;  2R7Z C;  1O2B A;  3GTO K;  2KXY A;  2GSU A;  3HOY K;  1I50 C;  3GTL C;  4Q5S A;  3GIR A;  5M5W K;  3S2H K;  3S15 K;  4A3M C;  5E68 A;  5C4J C;  3BUE A;  3GTJ A;  1EH1 A;  3GTQ A;  1SFO C;  4KB4 A;  2ZJQ S;  4WJ3 M;  3GTM C;  2Y0S D;  4Y52 C;  5JVH S;  5IP7 K;  5M5Y K;  3GTO C;  3S1N K;  1O2F B;  4WF9 S;  1Y1W K;  1F9N A;  1XZQ B;  3TFI A;  2GSN A;  4BY7 C;  3BP3 A;  1Y1V A;  1WCM C;  3T01 A;  3TFH A;  4A3D K;  3S2D C;  5C3E C;  1XXC A;  4BXX C;  4BBS K;  4GT9 A;  1J6V A;  5DM7 S;  5DM6 S;  2B63 A;  2XCR B;  4IOC S;  2Y3P A;  4U67 S;  4BLA A;  1TWA K;  1B4B A;  3GTJ C;  3HOW K;  3M3Y K;  3CQZ A;  3PIP S;  4IOA S;  4A3L C;  4KB2 A;  5HQH A;  3HOZ C;  5IP9 C;  3GTK K;  1I50 A;  3GTL A;  4KMU A;  5TMF A;  2A68 A;  2JA7 C;  1EQR A;  2JA5 K;  3GTG K;  5JVO A;  4LJZ A;  1TWA A;  2BE5 A;  1IBA A;  2NVX K;  1TWC C;  2PPB A;  3CQZ K;  2FQT A;  3CQZ C;  3AD8 C;  3OPF A;  1ISE A;  3S2H C;  3S17 C;  5HL7 S;  1WOP A;  1O26 A;  4C3J K;  1WCM A;  2JA6 K;  3I4N K;  3M4O C;  2V6T A;  2NVY K;  5EGH A;  4LQY A;  5M5X K;  1PJ7 A;  3S16 C;  1I6H C;  4O2D A;  4P5A A;  1Y1V K;  3GTG A;  4BBR K;  4KAS A;  4A3E K;  1KQ4 A;  4C45 A;  3H0G C;  4PAB A;  2KWA A;  1JOE A; 
#chains in the Genus database with same CATH homology
 1HQM A;  2R93 C;  1TWA C;  3RZO K;  2WB1 L;  5C4X K;  2A6H A;  1TWF K;  5C4J K;  2R92 K;  4A93 K;  4OIN A;  3GTG C;  4A3B K;  3S15 C;  3S1Q C;  4C2M K;  2JA7 K;  3H3V D;  3EQL A;  1R9T K;  3GTP K;  3DXJ A;  4YFX A;  4LK1 A;  4OIQ A;  4XLP A;  3HOU C;  3PO2 K;  3WOD A;  4A3B C;  2WAQ D;  4A3F C;  4A3I K;  3HOV K;  2R7Z C;  4XLN A;  4A3F K;  3GTO K;  4BBS C;  2WB1 D;  3HOX K;  1I50 C;  3GTL C;  4Q5S A;  3HOY K;  5M5W K;  5C3E K;  2YU9 K;  3S2H K;  1YNN A;  3S15 K;  4A3M C;  4Y7N C;  1IW7 A;  5C4J C;  5IYD C;  3M3Y C;  4YG2 A;  5D4D A;  3HOZ K;  5IYD K;  2A69 A;  1SFO C;  4A3L K;  2E2H C;  4BY7 K;  1Y1V C;  2E2J C;  4KN4 A;  3GTM C;  5IYC C;  2Y0S D;  4Y52 C;  2PMZ L;  5IP7 K;  5M5Y K;  1XPP A;  3GTO C;  4QIW D;  1WCM K;  3S1N K;  4ZH4 A;  2A6E A;  3S1M C;  1TWG C;  4OIP A;  4A3I C;  4OIR A;  1Y1W K;  3HOU K;  5IP7 C;  4Y52 K;  1I6H K;  4MQ9 A;  4X6A K;  2PA8 L;  4BY7 C;  2E2H K;  4QJV A;  3S1Q K;  1YNJ A;  3H3V L;  1WCM C;  3S1N C;  4AYB D;  4C3H K;  4G7Z A;  4A3D K;  3HKZ D;  3RZO C;  4A3M K;  2E2J K;  2R93 K;  2E2I C;  3S2D C;  3S17 K;  5C3E C;  4A3K C;  3S1R C;  4BXX C;  5C44 K;  3HOX C;  3HOY C;  4BBS K;  2VUM K;  4XSZ A;  4BBR C;  3K7A K;  5M3M K;  2VUM C;  2CW0 A;  1TWC K;  4A3K K;  3S1R K;  4A3G K;  4MEY A;  5M3F K;  4MEX A;  2E2I K;  3S2D K;  1R9T C;  4A3D C;  1TWH C;  3GTL K;  5FLM C;  4C2M C;  4KN7 A;  2R92 C;  3S14 C;  1TWF C;  4X6A C;  5TMC A;  1TWA K;  3GTP C;  2PMZ D;  4A3J K;  4JK1 A;  3GTM K;  2NVQ C;  3I4M C;  3FKI C;  3H0G K;  4A93 C;  1SFO K;  3GTJ C;  2NVT K;  3HOW K;  4A3E C;  3M3Y K;  2NVT C;  3GTJ K;  5C44 C;  3FKI K;  4G7H A;  4A3C K;  4A3L C;  3HOZ C;  3S14 K;  4Q4Z A;  5IP9 C;  3GTK K;  3HOV C;  4Y7N K;  2JA6 C;  3I4N C;  2YU9 C;  1TWH K;  4AYB L;  4KMU A;  4C3I C;  2B63 K;  5TMF A;  1I50 K;  2A68 A;  4LLG A;  2B63 C;  3PO3 C;  4C3I K;  2JA7 C;  4QIW L;  4BY1 K;  4A3G C;  2JA5 K;  4OIO A;  1ZYR A;  5FJ8 K;  3GTG K;  2R7Z K;  5IP9 K;  4LJZ A;  2BE5 A;  5C4X C;  3PO2 C;  5IYC K;  4BXX K;  2O5I A;  2NVX K;  1TWC C;  2PPB A;  3CQZ K;  1K83 C;  2JA8 C;  5IYB K;  3GTQ K;  3HOW C;  3CQZ C;  4QJV B;  4YFK A;  2JA5 C;  4NOI A;  3RZD K;  1I3Q K;  2PA8 D;  3S2H C;  3S17 C;  2NVQ K;  3I4M K;  3PO3 K;  4A3J C;  3HKZ L;  4XSX A;  4C3J K;  3S16 K;  1Y1W C;  4C3H C;  2WAQ L;  2JA6 K;  3I4N K;  2NVY C;  3M4O C;  1SMY A;  3S1M K;  2O5J A;  3GTK C;  1I6V A;  2NVY K;  5M5X K;  5FLM K;  4BY1 C;  4C3J C;  3S16 C;  4YFN A;  2Y0S L;  1I6H C;  4GZY A;  1Y1V K;  1BDF A;  3RZD C;  4LK0 A;  1TWG K;  3M4O K;  4G7O A;  3K7A C;  4BBR K;  4A3E K;  5IYB C;  3GTQ C;  1K83 K;  2JA8 K;  3H0G C;  4A3C C;  2NVX C;  1I3Q C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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