1I3QC

Rna polymerase ii crystal form i at 3.1 a resolution
Total Genus 54
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
54
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords DNA-DIRECTED RNA POLYMERASE II LARGEST SUBUNIT
publication title Structural basis of transcription: RNA polymerase II at 2.8 angstrom resolution.
pubmed doi rcsb
molecule tags Transcription
total genus 54
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2001-02-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 1i3qC01
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 1i3qC02
4XLPA 4YFKA 2O5JA 3HOYK 4X6AK 3CQZK 3GTOK 4BBSK 4A3BC 1I3QK 4BY7K 4Y7NC 2NVQK 3DXJA 5IYDK 3GTMC 5FLMC 2NVXC 3M3YC 4BBSC 4A3IK 4A3LK 3HOUC 5IYBC 3I4MC 4OIOA 3S15C 1I6HC 4LK0A 4BBRC 5IP7C 4A3FC 4A3JC 3GTQK 4C3IC 2PMZL 3PO3C 3S1QC 3S2DK 2PA8L 1TWHK 2CW0A 5IP9K 1I6HK 4MEYA 2PPBA 5M3MK 4Y7NK 3GTMK 3CQZC 4KN4A 3GTOC 3GTGC 4QJVB 2E2HC 5FLMK 5IYBK 5C4JK 3RZDK 2E2IC 3HOUK 4A3KK 4NOIA 3S15K 4OIQA 4A3LC 4BXXC 2A69A 1XPPA 4C3IK 3PO3K 4A3MC 2BE5A 3FKIC 3S1QK 2WB1L 3GTQC 5C44C 4GZYA 1K83K 5M5YK 4OIPA 1SMYA 4A93K 4KN7A 3S2DC 4YFXA 1TWHC 3HOXK 5D4DA 3GTGK 5IP9C 5FJ8K 2E2HK 4LLGA 2E2IK 4QIWD 4OINA 4BXXK 4Q4ZA 5C3EC 5C4JC 3RZDC 4A3KC 1SFOC 4A3MK 2WAQL 3FKIK 5C44K 4YFNA 4A3DC 4AYBL 1K83C 5M5XK 3S1NK 4ZH4A 4BY1C 4A3CC 4A93C 3HOXC 3S16C 2PMZD 4MQ9A 3S1MK 5C3EK 3HOWC 2PA8D 1SFOK 2VUMC 2NVTK 2JA5K 3H3VL 3M4OK 4OIRA 4A3DK 4BY1K 4A3CK 5C4XC 1YNJA 1Y1WK 3S16K 5TMCA 5M3FK 3WODA 3GTLK 2WB1D 3HOWK 3H0GC 2VUMK 3S1MC 1I50K 4JK1A 1YNNA 3S17K 3PO2K 2NVTC 4MEXA 2JA5C 1TWCC 3S1NC 3M4OC 1TWFK 5C4XK 5IYCK 1I6VA 3RZOC 2NVXK 2R92K 1ZYRA 4XSZA 2JA7K 2R7ZK 3S14C 2WAQD 3I4NK 4LK1A 2JA6C 1Y1WC 2R93C 1Y1VC 3H0GK 2B63C 4YG2A 3GTLC 4C3HC 1R9TK 4AYBD 2YU9C 3S1RK 4A3GK 3K7AK 3S2HC 4C3JC 4G7ZA 1WCMC 2O5IA 1I50C 3GTPC 1TWCK 2E2JK 2JA8K 4C2MC 1TWAC 1TWGC 3M3YK 4QJVA 4Q5SA 3S17C 2NVYC 3PO2C 3RZOK 3HOVC 3HOZC 4KMUA 3GTJC 1TWFC 4LJZA 3GTKC 3S14K 2A6HA 2JA6K 2A68A 4Y52C 5IYCC 3H3VD 2R92C 1Y1VK 2Y0SL 2B63K 2JA7C 2R93K 5TMFA 4G7HA 4A3EC 2R7ZC 3I4NC 4C3HK 2YU9K 4G7OA 3S2HK 4C3JK 1WCMK 3GTPK 1R9TC 1BDFA 2Y0SD 3S1RC 1TWAK 2A6EA 3K7AC 1TWGK 4C2MK 2NVYK 4XLNA 3HKZL 4A3BK 3HOVK 2E2JC 2JA8C 3EQLA 4A3GC 3GTJK 3HOZK 3HOYC 4X6AC 3GTKK 1HQMA 4Y52K 1I3QC 4BY7C 3I4MK 5IYDC 2NVQC 4BBRK 5IP7K 1IW7A 4A3EK 4A3FK 3HKZD 4A3IC 4A3JK 4XSXA 4QIWL 5M5WK
chains in the Genus database with same CATH superfamily
1TWGA 4KM9A 5HL8A 3GTMC 5FLMC 2NVXC 4BBSC 4A3LK 3S15C 3I4MC 5IP7C 4A3FC 2KWAA 2PMZL 3DLLS 1YX2A 4IO9S 1J6VA 5IP9K 2PPBA 3GTMK 3CQZC 3GTOC 3GTGC 5FLMK 2NVXK 2E2HC 4BBSK 3S15K 2ZJPS 4A3KK 4OIQA 1XPPA 3BP3A 3QX3A 5JVGS 3OPFA 3AD7C 1ZBSA 4KN7A 1TWHC 5D4DA 3GTGK 4GTLA 3TFJA 4XCHA 5FJ8K 4P5AA 2E2HK 1V5VA 3NUHA 1WOOA 4OINA 3L4KA 3SZYA 5TJ3A 2GSNA 3T01A 4A3DC 1K83C 4BY1C 1HI9A 1B4BA 1XZPA 1EQRA 3HOXC 3S1MK 4KASA 2PA8D 2VUMC 4KB2A 3LAJA 1USMA 4OIRA 3OEPA 4A3DK 2ZUFA 4BY1K 5C4XC 1YNJA 1VJEA 2PHCB 2WB1D 4GTDA 2VUMK 1I50K 3A8IA 3PIPS 1IE0A 2XCQA 3AQPA 3S17K 3GIRA 2NVTC 3OREA 1O2AA 1O26A 4KMAA 3M4OC 4P5BA 5C4XK 5IYCK 4P9SA 2R92K 4XSZA 1JVIA 2W7VA 2WAQD 4LK1A 1PJ6A 3V4GA 4AYBD 2V6UA 4G7ZA 3GTPC 2E2JK 2JA8K 4GTCA 2NVYC 3PO2C 1TWFC 4LJZA 4G0VA 3H3VD 1L0WA 4G7HA 4A3EC 4KATA 1F7UA 1UV7A 3GTPK 1R9TC 1SFOA 3S1RC 4LQYA 2NVYK 4GFQA 5DM7S 3HOYC 2KXYA 5IYDC 2NVQC 4BBRK 4A3EK 1EFWA 2FQTA 1BGWA 5HQHA 4YFKA 1O29A 3HOYK 1YCLA 2XCRB 4A3BC 2NVQK 5IYDK 1PJ5A 2JA7A 2R7ZA 2ZUEA 4A3JC 3H0GA 3GTQK 3GEHA 4C3IC 3ERED 3S1QC 4LOWA 4KDDA 3GDZA 4KN4A 3LYWA 5C4JK 3RZDK 2CFAB 2E2IC 2JA6A 4NOIA 4A3LC 4C3IK 4A3MC 4DDQA 2BE5A 3FKIC 3S1QK 4GZYA 4OIPA 5CJ9A 1SMYA 2V6TA 3HXAA 4BKWA 3Q3QA 3G4AA 5IP9C 4RMFA 5JFEA 3GTJA 3GTMA 2P8TA 2E2IK 4Q4ZA 1O2FB 1WQHA 2D6FC 4A3KC 4A3MK 3FKIK 3A8KA 4YFNA 2KPUA 1XZQA 4A3CC 3CQZA 3GTOA 4U67S 1I3QA 3S0XA 4MQ9A 1EI6A 1F7VA 3HOWC 5IOTA 2JA5K 2L3UA 1F93A 5JVHS 1WQFA 2FQOA 1O2BA 4A3CK 1TWHA 1Y1WK 4KC6A 1KQ4A 3GTLK 3HOWK 2GAHC 1WOPA 3S1MC 3S1NC 1ZVUA 1K83A 1XXBA 2KQ1A 2R93C 1FEUA 4YG2A 2VUMA 1JQWA 2O5IA 3S1NK 1I50C 3S17C 3CF5S 1INNA 2CFAA 3N0CA 4KMUA 3T02A 5IYCC 2Y0SL 2R93K 2R92C 4BLAA 3GEEA 1J6WA 3HKZL 2E2JC 2JA8C 2JH3A 4X6AC 1O24A 2V6SA 1IL2A 1IW7A 4A3IC 1ZXOA 1DCPA 1WOSA 1EK8A 5L46A 2EBBA 4X6AK 1TWFA 4Y7NC 3DXJA 5EGHA 1C0AA 4A3IK 3FHZA 1XZQB 3HOUC 5IYBC 1I6HC 4BBRC 4G0UA 1WQGA 1R9TA 4GT9A 3S2DK 2PA8L 2XCOA 1TWCA 1G51A 1DD5A 1IQ0A 4Y7NK 4KAWX 4QJVB 3HOUK 5IYBK 2ZJQS 1I6HK 1PJ7A 1Y1VA 2B63A 1J98A 4KM8A 2YU9A 4KARA 2WB1L 3GTQC 4FM9A 1TWAA 4WCES 1X31C 4A93K 4YFXA 5IOSA 4IOCS 4WFAS 3GTKA 4QIWD 3T00A 1F9NA 5C3EC 5C4JC 3RZDC 1VLOA 1SFOC 2GSOA 2WAQL 4WF9S 1B4AA 5JVOA 3G4CA 4AYBL 5M5XK 5DM6S 4ZH4A 4AH6A 4BLBA 2PMZD 5C3EK 1SFOK 3N0BA 3H3VL 4IOAS 2RGRA 2L5NA 5TMCA 1WSVA 2Y3PA 3WODA 3TTGA 2NVXA 3AD8C 3FOEA 3H0GC 4WJ4A 1WIHA 2JA5C 3AQOA 4WFNS 1I6VA 1ZQ1C 3RZOC 2GAGC 1ZYRA 2JA7K 3IPJA 2R7ZK 3I4NK 2JA6C 1Y1WC 3GTGA 3CAGA 3H0GK 1USOA 2E2HA 1O25A 3GTLC 4C3HC 3K7AK 3S2HC 1WCMC 4A3GK 4C2MC 1TWGC 3MMLB 4QJVA 4Q5SA 2P5MA 1WSRA 5EGEA 3HOVC 3RZOK 3HOZC 3GTJC 4PAAA 2A6HA 2JA6K 4Y52C 2GSUA 5TMFA 3AH5A 4C3HK 4WJ3M 3S2HK 1WCMK 2Y0SD 3TFIA 1TWGK 2A6EA 4C2MK 3PIOS 3HOVK 3HOZK 3EQLA 3GTJK 1HQMA 4Y52K 1I3QC 3GSIA 4BY7C 1DCOA 3L4JA 3I4MK 2R93A 5IP7K 4A3FK 3HKZD 3N3YA 5E68A 1WORA 5M5WK 1I50A 4XLPA 2O5JA 5HL7S 4O2DA 3CQZK 3GTOK 1I3QK 4BY7K 4WFBS 1BS2A 1EH1A 1O27A 3ADAC 2R92A 3M3YC 3VA7A 5CHPA 4OIOA 4LK0A 5IOQA 3PO3C 3BUEA 4GTAA 1TWHK 2CW0A 4KMDA 5IORA 4MEYA 5M3MK 3M3YK 1BJTA 3BP8C 4BXXC 4J3NA 2A69A 4PABA 3PO3K 4KB4A 3A8JA 3SZZA 5C44C 1K83K 5M5YK 1GE9A 3GTPA 3S2DC 2NVYA 3HOXK 3LAPA 4LLGA 4BXXK 4ILDA 5C44K 1VH2A 4LR2A 2ZFZA 4FZBA 4A93C 3S16C 1RU0A 1O28A 4GTFA 3TFHA 1J6XA 1JOEA 2NVTK 1ISEA 4GTBA 3M4OK 3GTQA 4G0WA 4GTEA 3S16K 5M3FK 1XXAA 3AD9C 4JK1A 1YNNA 3PO2K 4MEXA 1TWCC 1TWFK 4KMHA 3S14C 3JSTA 1Y1VC 2B63C 2E2IA 1R9TK 3LPXA 3FOFA 2YU9C 3S1RK 4C3JC 1TWCK 3FKIA 1TWAC 1IS1A 1VGXA 1IBAA 1AB4A 3GTKC 3S14K 2A68A 1Y1VK 2B63K 2JA7C 2ZJRS 2R7ZC 3I4NC 3GEIA 1XZPB 4M1XA 4G7OA 2YU9K 4C3JK 1BDFA 1XXCA 1TWAK 3K7AC 2JA5A 4WILA 4XLNA 4A3BK 4A3GC 3GTKK 2RH6A 1DCHA 1Y1WA 1VRQC 4A3JK 3GTLA 4C45A 4XSXA 4QIWL 1WCMA
chains in the Genus database with same CATH topology
4XLPA 4YFKA 2O5JA 3HOYK 4X6AK 3CQZK 3GTOK 4BBSK 4A3BC 1I3QK 4BY7K 4Y7NC 2NVQK 3DXJA 5IYDK 3GTMC 5FLMC 2NVXC 3M3YC 4BBSC 4A3IK 4A3LK 3HOUC 5IYBC 3I4MC 4OIOA 3S15C 1I6HC 4LK0A 4BBRC 5IP7C 4A3FC 4A3JC 3GTQK 4C3IC 2PMZL 3PO3C 3S1QC 3S2DK 2PA8L 1TWHK 2CW0A 5IP9K 1I6HK 4MEYA 2PPBA 5M3MK 4Y7NK 3GTMK 3CQZC 4KN4A 3GTOC 3GTGC 4QJVB 2E2HC 5FLMK 5IYBK 5C4JK 3RZDK 2E2IC 3HOUK 4A3KK 4NOIA 3S15K 4OIQA 4A3LC 4BXXC 2A69A 1XPPA 4C3IK 3PO3K 4A3MC 2BE5A 3FKIC 3S1QK 2WB1L 3GTQC 5C44C 4GZYA 1K83K 5M5YK 4OIPA 1SMYA 4A93K 4KN7A 3S2DC 4YFXA 1TWHC 3HOXK 5D4DA 3GTGK 5IP9C 5FJ8K 2E2HK 4LLGA 2E2IK 4QIWD 4OINA 4BXXK 4Q4ZA 5C3EC 5C4JC 3RZDC 4A3KC 1SFOC 4A3MK 2WAQL 3FKIK 5C44K 4YFNA 4A3DC 4AYBL 1K83C 5M5XK 3S1NK 4ZH4A 4BY1C 4A3CC 4A93C 3HOXC 3S16C 2PMZD 4MQ9A 3S1MK 5C3EK 3HOWC 2PA8D 1SFOK 2VUMC 2NVTK 2JA5K 3H3VL 3M4OK 4OIRA 4A3DK 4BY1K 4A3CK 5C4XC 1YNJA 1Y1WK 3S16K 5TMCA 5M3FK 3WODA 3GTLK 2WB1D 3HOWK 3H0GC 2VUMK 3S1MC 1I50K 4JK1A 1YNNA 3S17K 3PO2K 2NVTC 4MEXA 2JA5C 1TWCC 3S1NC 3M4OC 1TWFK 5C4XK 5IYCK 1I6VA 3RZOC 2NVXK 2R92K 1ZYRA 4XSZA 2JA7K 2R7ZK 3S14C 2WAQD 3I4NK 4LK1A 2JA6C 1Y1WC 2R93C 1Y1VC 3H0GK 2B63C 4YG2A 3GTLC 4C3HC 1R9TK 4AYBD 2YU9C 3S1RK 4A3GK 3K7AK 3S2HC 4C3JC 4G7ZA 1WCMC 2O5IA 1I50C 3GTPC 1TWCK 2E2JK 2JA8K 4C2MC 1TWAC 1TWGC 3M3YK 4QJVA 4Q5SA 3S17C 2NVYC 3PO2C 3RZOK 3HOVC 3HOZC 4KMUA 3GTJC 1TWFC 4LJZA 3GTKC 3S14K 2A6HA 2JA6K 2A68A 4Y52C 5IYCC 3H3VD 2R92C 1Y1VK 2Y0SL 2B63K 2JA7C 2R93K 5TMFA 4G7HA 4A3EC 2R7ZC 3I4NC 4C3HK 2YU9K 4G7OA 3S2HK 4C3JK 1WCMK 3GTPK 1R9TC 1BDFA 2Y0SD 3S1RC 1TWAK 2A6EA 3K7AC 1TWGK 4C2MK 2NVYK 4XLNA 3HKZL 4A3BK 3HOVK 2E2JC 2JA8C 3EQLA 4A3GC 3GTJK 3HOZK 3HOYC 4X6AC 3GTKK 1HQMA 4Y52K 1I3QC 4BY7C 3I4MK 5IYDC 2NVQC 4BBRK 5IP7K 1IW7A 4A3EK 4A3FK 3HKZD 4A3IC 4A3JK 4XSXA 4QIWL 5M5WK
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4XLP A;  4YFK A;  2O5J A;  3HOY K;  4X6A K;  3CQZ K;  3GTO K;  4BBS K;  4A3B C;  1I3Q K;  4BY7 K;  4Y7N C;  2NVQ K;  3DXJ A;  5IYD K;  3GTM C;  5FLM C;  2NVX C;  3M3Y C;  4BBS C;  4A3I K;  4A3L K;  3HOU C;  5IYB C;  3I4M C;  4OIO A;  3S15 C;  1I6H C;  4LK0 A;  4BBR C;  5IP7 C;  4A3F C;  4A3J C;  3GTQ K;  4C3I C;  2PMZ L;  3PO3 C;  3S1Q C;  3S2D K;  2PA8 L;  1TWH K;  2CW0 A;  5IP9 K;  1I6H K;  4MEY A;  2PPB A;  5M3M K;  4Y7N K;  3GTM K;  3CQZ C;  4KN4 A;  3GTO C;  3GTG C;  4QJV B;  2E2H C;  5FLM K;  5IYB K;  5C4J K;  3RZD K;  2E2I C;  3HOU K;  4A3K K;  4NOI A;  3S15 K;  4OIQ A;  4A3L C;  4BXX C;  2A69 A;  1XPP A;  4C3I K;  3PO3 K;  4A3M C;  2BE5 A;  3FKI C;  3S1Q K;  2WB1 L;  3GTQ C;  5C44 C;  4GZY A;  1K83 K;  5M5Y K;  4OIP A;  1SMY A;  4A93 K;  4KN7 A;  3S2D C;  4YFX A;  1TWH C;  3HOX K;  5D4D A;  3GTG K;  5IP9 C;  5FJ8 K;  2E2H K;  4LLG A;  2E2I K;  4QIW D;  4OIN A;  4BXX K;  4Q4Z A;  5C3E C;  5C4J C;  3RZD C;  4A3K C;  1SFO C;  4A3M K;  2WAQ L;  3FKI K;  5C44 K;  4YFN A;  4A3D C;  4AYB L;  1K83 C;  5M5X K;  3S1N K;  4ZH4 A;  4BY1 C;  4A3C C;  4A93 C;  3HOX C;  3S16 C;  2PMZ D;  4MQ9 A;  3S1M K;  5C3E K;  3HOW C;  2PA8 D;  1SFO K;  2VUM C;  2NVT K;  2JA5 K;  3H3V L;  3M4O K;  4OIR A;  4A3D K;  4BY1 K;  4A3C K;  5C4X C;  1YNJ A;  1Y1W K;  3S16 K;  5TMC A;  5M3F K;  3WOD A;  3GTL K;  2WB1 D;  3HOW K;  3H0G C;  2VUM K;  3S1M C;  1I50 K;  4JK1 A;  1YNN A;  3S17 K;  3PO2 K;  2NVT C;  4MEX A;  2JA5 C;  1TWC C;  3S1N C;  3M4O C;  1TWF K;  5C4X K;  5IYC K;  1I6V A;  3RZO C;  2NVX K;  2R92 K;  1ZYR A;  4XSZ A;  2JA7 K;  2R7Z K;  3S14 C;  2WAQ D;  3I4N K;  4LK1 A;  2JA6 C;  1Y1W C;  2R93 C;  1Y1V C;  3H0G K;  2B63 C;  4YG2 A;  3GTL C;  4C3H C;  1R9T K;  4AYB D;  2YU9 C;  3S1R K;  4A3G K;  3K7A K;  3S2H C;  4C3J C;  4G7Z A;  1WCM C;  2O5I A;  1I50 C;  3GTP C;  1TWC K;  2E2J K;  2JA8 K;  4C2M C;  1TWA C;  1TWG C;  3M3Y K;  4QJV A;  4Q5S A;  3S17 C;  2NVY C;  3PO2 C;  3RZO K;  3HOV C;  3HOZ C;  4KMU A;  3GTJ C;  1TWF C;  4LJZ A;  3GTK C;  3S14 K;  2A6H A;  2JA6 K;  2A68 A;  4Y52 C;  5IYC C;  3H3V D;  2R92 C;  1Y1V K;  2Y0S L;  2B63 K;  2JA7 C;  2R93 K;  5TMF A;  4G7H A;  4A3E C;  2R7Z C;  3I4N C;  4C3H K;  2YU9 K;  4G7O A;  3S2H K;  4C3J K;  1WCM K;  3GTP K;  1R9T C;  1BDF A;  2Y0S D;  3S1R C;  1TWA K;  2A6E A;  3K7A C;  1TWG K;  4C2M K;  2NVY K;  4XLN A;  3HKZ L;  4A3B K;  3HOV K;  2E2J C;  2JA8 C;  3EQL A;  4A3G C;  3GTJ K;  3HOZ K;  3HOY C;  4X6A C;  3GTK K;  1HQM A;  4Y52 K;  1I3Q C;  4BY7 C;  3I4M K;  5IYD C;  2NVQ C;  4BBR K;  5IP7 K;  1IW7 A;  4A3E K;  4A3F K;  3HKZ D;  4A3I C;  4A3J K;  4XSX A;  4QIW L;  5M5W K; 
#chains in the Genus database with same CATH topology
 1TWG A;  4KM9 A;  5HL8 A;  3GTM C;  5FLM C;  2NVX C;  4BBS C;  4A3L K;  3S15 C;  3I4M C;  5IP7 C;  4A3F C;  2KWA A;  2PMZ L;  3DLL S;  1YX2 A;  4IO9 S;  1J6V A;  5IP9 K;  2PPB A;  3GTM K;  3CQZ C;  3GTO C;  3GTG C;  5FLM K;  2NVX K;  2E2H C;  4BBS K;  3S15 K;  2ZJP S;  4A3K K;  4OIQ A;  1XPP A;  3BP3 A;  3QX3 A;  5JVG S;  3OPF A;  3AD7 C;  1ZBS A;  4KN7 A;  1TWH C;  5D4D A;  3GTG K;  4GTL A;  3TFJ A;  4XCH A;  5FJ8 K;  4P5A A;  2E2H K;  1V5V A;  3NUH A;  1WOO A;  4OIN A;  3L4K A;  3SZY A;  5TJ3 A;  2GSN A;  3T01 A;  4A3D C;  1K83 C;  4BY1 C;  1HI9 A;  1B4B A;  1XZP A;  1EQR A;  3HOX C;  3S1M K;  4KAS A;  2PA8 D;  2VUM C;  4KB2 A;  3LAJ A;  1USM A;  4OIR A;  3OEP A;  4A3D K;  2ZUF A;  4BY1 K;  5C4X C;  1YNJ A;  1VJE A;  2PHC B;  2WB1 D;  4GTD A;  2VUM K;  1I50 K;  3A8I A;  3PIP S;  1IE0 A;  2XCQ A;  3AQP A;  3S17 K;  3GIR A;  2NVT C;  3ORE A;  1O2A A;  1O26 A;  4KMA A;  3M4O C;  4P5B A;  5C4X K;  5IYC K;  4P9S A;  2R92 K;  4XSZ A;  1JVI A;  2W7V A;  2WAQ D;  4LK1 A;  1PJ6 A;  3V4G A;  4AYB D;  2V6U A;  4G7Z A;  3GTP C;  2E2J K;  2JA8 K;  4GTC A;  2NVY C;  3PO2 C;  1TWF C;  4LJZ A;  4G0V A;  3H3V D;  1L0W A;  4G7H A;  4A3E C;  4KAT A;  1F7U A;  1UV7 A;  3GTP K;  1R9T C;  1SFO A;  3S1R C;  4LQY A;  2NVY K;  4GFQ A;  5DM7 S;  3HOY C;  2KXY A;  5IYD C;  2NVQ C;  4BBR K;  4A3E K;  1EFW A;  2FQT A;  1BGW A;  5HQH A;  4YFK A;  1O29 A;  3HOY K;  1YCL A;  2XCR B;  4A3B C;  2NVQ K;  5IYD K;  1PJ5 A;  2JA7 A;  2R7Z A;  2ZUE A;  4A3J C;  3H0G A;  3GTQ K;  3GEH A;  4C3I C;  3ERE D;  3S1Q C;  4LOW A;  4KDD A;  3GDZ A;  4KN4 A;  3LYW A;  5C4J K;  3RZD K;  2CFA B;  2E2I C;  2JA6 A;  4NOI A;  4A3L C;  4C3I K;  4A3M C;  4DDQ A;  2BE5 A;  3FKI C;  3S1Q K;  4GZY A;  4OIP A;  5CJ9 A;  1SMY A;  2V6T A;  3HXA A;  4BKW A;  3Q3Q A;  3G4A A;  5IP9 C;  4RMF A;  5JFE A;  3GTJ A;  3GTM A;  2P8T A;  2E2I K;  4Q4Z A;  1O2F B;  1WQH A;  2D6F C;  4A3K C;  4A3M K;  3FKI K;  3A8K A;  4YFN A;  2KPU A;  1XZQ A;  4A3C C;  3CQZ A;  3GTO A;  4U67 S;  1I3Q A;  3S0X A;  4MQ9 A;  1EI6 A;  1F7V A;  3HOW C;  5IOT A;  2JA5 K;  2L3U A;  1F93 A;  5JVH S;  1WQF A;  2FQO A;  1O2B A;  4A3C K;  1TWH A;  1Y1W K;  4KC6 A;  1KQ4 A;  3GTL K;  3HOW K;  2GAH C;  1WOP A;  3S1M C;  3S1N C;  1ZVU A;  1K83 A;  1XXB A;  2KQ1 A;  2R93 C;  1FEU A;  4YG2 A;  2VUM A;  1JQW A;  2O5I A;  3S1N K;  1I50 C;  3S17 C;  3CF5 S;  1INN A;  2CFA A;  3N0C A;  4KMU A;  3T02 A;  5IYC C;  2Y0S L;  2R93 K;  2R92 C;  4BLA A;  3GEE A;  1J6W A;  3HKZ L;  2E2J C;  2JA8 C;  2JH3 A;  4X6A C;  1O24 A;  2V6S A;  1IL2 A;  1IW7 A;  4A3I C;  1ZXO A;  1DCP A;  1WOS A;  1EK8 A;  5L46 A;  2EBB A;  4X6A K;  1TWF A;  4Y7N C;  3DXJ A;  5EGH A;  1C0A A;  4A3I K;  3FHZ A;  1XZQ B;  3HOU C;  5IYB C;  1I6H C;  4BBR C;  4G0U A;  1WQG A;  1R9T A;  4GT9 A;  3S2D K;  2PA8 L;  2XCO A;  1TWC A;  1G51 A;  1DD5 A;  1IQ0 A;  4Y7N K;  4KAW X;  4QJV B;  3HOU K;  5IYB K;  2ZJQ S;  1I6H K;  1PJ7 A;  1Y1V A;  2B63 A;  1J98 A;  4KM8 A;  2YU9 A;  4KAR A;  2WB1 L;  3GTQ C;  4FM9 A;  1TWA A;  4WCE S;  1X31 C;  4A93 K;  4YFX A;  5IOS A;  4IOC S;  4WFA S;  3GTK A;  4QIW D;  3T00 A;  1F9N A;  5C3E C;  5C4J C;  3RZD C;  1VLO A;  1SFO C;  2GSO A;  2WAQ L;  4WF9 S;  1B4A A;  5JVO A;  3G4C A;  4AYB L;  5M5X K;  5DM6 S;  4ZH4 A;  4AH6 A;  4BLB A;  2PMZ D;  5C3E K;  1SFO K;  3N0B A;  3H3V L;  4IOA S;  2RGR A;  2L5N A;  5TMC A;  1WSV A;  2Y3P A;  3WOD A;  3TTG A;  2NVX A;  3AD8 C;  3FOE A;  3H0G C;  4WJ4 A;  1WIH A;  2JA5 C;  3AQO A;  4WFN S;  1I6V A;  1ZQ1 C;  3RZO C;  2GAG C;  1ZYR A;  2JA7 K;  3IPJ A;  2R7Z K;  3I4N K;  2JA6 C;  1Y1W C;  3GTG A;  3CAG A;  3H0G K;  1USO A;  2E2H A;  1O25 A;  3GTL C;  4C3H C;  3K7A K;  3S2H C;  1WCM C;  4A3G K;  4C2M C;  1TWG C;  3MML B;  4QJV A;  4Q5S A;  2P5M A;  1WSR A;  5EGE A;  3HOV C;  3RZO K;  3HOZ C;  3GTJ C;  4PAA A;  2A6H A;  2JA6 K;  4Y52 C;  2GSU A;  5TMF A;  3AH5 A;  4C3H K;  4WJ3 M;  3S2H K;  1WCM K;  2Y0S D;  3TFI A;  1TWG K;  2A6E A;  4C2M K;  3PIO S;  3HOV K;  3HOZ K;  3EQL A;  3GTJ K;  1HQM A;  4Y52 K;  1I3Q C;  3GSI A;  4BY7 C;  1DCO A;  3L4J A;  3I4M K;  2R93 A;  5IP7 K;  4A3F K;  3HKZ D;  3N3Y A;  5E68 A;  1WOR A;  5M5W K;  1I50 A;  4XLP A;  2O5J A;  5HL7 S;  4O2D A;  3CQZ K;  3GTO K;  1I3Q K;  4BY7 K;  4WFB S;  1BS2 A;  1EH1 A;  1O27 A;  3ADA C;  2R92 A;  3M3Y C;  3VA7 A;  5CHP A;  4OIO A;  4LK0 A;  5IOQ A;  3PO3 C;  3BUE A;  4GTA A;  1TWH K;  2CW0 A;  4KMD A;  5IOR A;  4MEY A;  5M3M K;  3M3Y K;  1BJT A;  3BP8 C;  4BXX C;  4J3N A;  2A69 A;  4PAB A;  3PO3 K;  4KB4 A;  3A8J A;  3SZZ A;  5C44 C;  1K83 K;  5M5Y K;  1GE9 A;  3GTP A;  3S2D C;  2NVY A;  3HOX K;  3LAP A;  4LLG A;  4BXX K;  4ILD A;  5C44 K;  1VH2 A;  4LR2 A;  2ZFZ A;  4FZB A;  4A93 C;  3S16 C;  1RU0 A;  1O28 A;  4GTF A;  3TFH A;  1J6X A;  1JOE A;  2NVT K;  1ISE A;  4GTB A;  3M4O K;  3GTQ A;  4G0W A;  4GTE A;  3S16 K;  5M3F K;  1XXA A;  3AD9 C;  4JK1 A;  1YNN A;  3PO2 K;  4MEX A;  1TWC C;  1TWF K;  4KMH A;  3S14 C;  3JST A;  1Y1V C;  2B63 C;  2E2I A;  1R9T K;  3LPX A;  3FOF A;  2YU9 C;  3S1R K;  4C3J C;  1TWC K;  3FKI A;  1TWA C;  1IS1 A;  1VGX A;  1IBA A;  1AB4 A;  3GTK C;  3S14 K;  2A68 A;  1Y1V K;  2B63 K;  2JA7 C;  2ZJR S;  2R7Z C;  3I4N C;  3GEI A;  1XZP B;  4M1X A;  4G7O A;  2YU9 K;  4C3J K;  1BDF A;  1XXC A;  1TWA K;  3K7A C;  2JA5 A;  4WIL A;  4XLN A;  4A3B K;  4A3G C;  3GTK K;  2RH6 A;  1DCH A;  1Y1W A;  1VRQ C;  4A3J K;  3GTL A;  4C45 A;  4XSX A;  4QIW L;  1WCM A; 
#chains in the Genus database with same CATH homology
 4XLP A;  4YFK A;  2O5J A;  3HOY K;  4X6A K;  3CQZ K;  3GTO K;  4BBS K;  4A3B C;  1I3Q K;  4BY7 K;  4Y7N C;  2NVQ K;  3DXJ A;  5IYD K;  3GTM C;  5FLM C;  2NVX C;  3M3Y C;  4BBS C;  4A3I K;  4A3L K;  3HOU C;  5IYB C;  3I4M C;  4OIO A;  3S15 C;  1I6H C;  4LK0 A;  4BBR C;  5IP7 C;  4A3F C;  4A3J C;  3GTQ K;  4C3I C;  2PMZ L;  3PO3 C;  3S1Q C;  3S2D K;  2PA8 L;  1TWH K;  2CW0 A;  5IP9 K;  1I6H K;  4MEY A;  2PPB A;  5M3M K;  4Y7N K;  3GTM K;  3CQZ C;  4KN4 A;  3GTO C;  3GTG C;  4QJV B;  2E2H C;  5FLM K;  5IYB K;  5C4J K;  3RZD K;  2E2I C;  3HOU K;  4A3K K;  4NOI A;  3S15 K;  4OIQ A;  4A3L C;  4BXX C;  2A69 A;  1XPP A;  4C3I K;  3PO3 K;  4A3M C;  2BE5 A;  3FKI C;  3S1Q K;  2WB1 L;  3GTQ C;  5C44 C;  4GZY A;  1K83 K;  5M5Y K;  4OIP A;  1SMY A;  4A93 K;  4KN7 A;  3S2D C;  4YFX A;  1TWH C;  3HOX K;  5D4D A;  3GTG K;  5IP9 C;  5FJ8 K;  2E2H K;  4LLG A;  2E2I K;  4QIW D;  4OIN A;  4BXX K;  4Q4Z A;  5C3E C;  5C4J C;  3RZD C;  4A3K C;  1SFO C;  4A3M K;  2WAQ L;  3FKI K;  5C44 K;  4YFN A;  4A3D C;  4AYB L;  1K83 C;  5M5X K;  3S1N K;  4ZH4 A;  4BY1 C;  4A3C C;  4A93 C;  3HOX C;  3S16 C;  2PMZ D;  4MQ9 A;  3S1M K;  5C3E K;  3HOW C;  2PA8 D;  1SFO K;  2VUM C;  2NVT K;  2JA5 K;  3H3V L;  3M4O K;  4OIR A;  4A3D K;  4BY1 K;  4A3C K;  5C4X C;  1YNJ A;  1Y1W K;  3S16 K;  5TMC A;  5M3F K;  3WOD A;  3GTL K;  2WB1 D;  3HOW K;  3H0G C;  2VUM K;  3S1M C;  1I50 K;  4JK1 A;  1YNN A;  3S17 K;  3PO2 K;  2NVT C;  4MEX A;  2JA5 C;  1TWC C;  3S1N C;  3M4O C;  1TWF K;  5C4X K;  5IYC K;  1I6V A;  3RZO C;  2NVX K;  2R92 K;  1ZYR A;  4XSZ A;  2JA7 K;  2R7Z K;  3S14 C;  2WAQ D;  3I4N K;  4LK1 A;  2JA6 C;  1Y1W C;  2R93 C;  1Y1V C;  3H0G K;  2B63 C;  4YG2 A;  3GTL C;  4C3H C;  1R9T K;  4AYB D;  2YU9 C;  3S1R K;  4A3G K;  3K7A K;  3S2H C;  4C3J C;  4G7Z A;  1WCM C;  2O5I A;  1I50 C;  3GTP C;  1TWC K;  2E2J K;  2JA8 K;  4C2M C;  1TWA C;  1TWG C;  3M3Y K;  4QJV A;  4Q5S A;  3S17 C;  2NVY C;  3PO2 C;  3RZO K;  3HOV C;  3HOZ C;  4KMU A;  3GTJ C;  1TWF C;  4LJZ A;  3GTK C;  3S14 K;  2A6H A;  2JA6 K;  2A68 A;  4Y52 C;  5IYC C;  3H3V D;  2R92 C;  1Y1V K;  2Y0S L;  2B63 K;  2JA7 C;  2R93 K;  5TMF A;  4G7H A;  4A3E C;  2R7Z C;  3I4N C;  4C3H K;  2YU9 K;  4G7O A;  3S2H K;  4C3J K;  1WCM K;  3GTP K;  1R9T C;  1BDF A;  2Y0S D;  3S1R C;  1TWA K;  2A6E A;  3K7A C;  1TWG K;  4C2M K;  2NVY K;  4XLN A;  3HKZ L;  4A3B K;  3HOV K;  2E2J C;  2JA8 C;  3EQL A;  4A3G C;  3GTJ K;  3HOZ K;  3HOY C;  4X6A C;  3GTK K;  1HQM A;  4Y52 K;  1I3Q C;  4BY7 C;  3I4M K;  5IYD C;  2NVQ C;  4BBR K;  5IP7 K;  1IW7 A;  4A3E K;  4A3F K;  3HKZ D;  4A3I C;  4A3J K;  4XSX A;  4QIW L;  5M5W K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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