4XLPA

Crystal structure of t.aquaticus transcription initiation complex containing upstream fork promoter
Total Genus 40
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
40
sequence length
227
structure length
227
Chain Sequence
KAPVFTATTQGDHYGEFVLEPLERGFGVTLGNPLRRILLSSIPGTAVTSVYIEDVLHEFSTIPGVKEDVVEIILNLKELVVRFLDPKMASTTLILRAEGPKEVRAGDFTPSADVEIMNPDLHIATLEEGGKLYMEVRVDRGVGYVPAERHGIKDRINAIPVDAIFSPVRRVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVAILKEHLNYFANPEASLL
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structure of a bacterial RNA polymerase holoenzyme open promoter complex.
pubmed doi rcsb
molecule keywords DNA-directed RNA polymerase subunit alpha
molecule tags Transcription/dna
source organism Thermus aquaticus
total genus 40
structure length 227
sequence length 227
chains with identical sequence B, G, H
ec nomenclature ec 2.7.7.6: DNA-directed RNA polymerase.
pdb deposition date 2015-01-13

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
A PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
A PF03118 RNA_pol_A_CTD Bacterial RNA polymerase, alpha chain C terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 4xlpA02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 4xlpA01
2E2JC 4C3JK 3RZOC 3S15K 1TWFK 4G7ZA 3HOYK 4KN4A 4BBSC 4C3HC 2JA8C 3GTLC 2Y0SD 2JA5C 1WCMK 4Y7NK 2E2HK 3I4NK 5IYDK 3GTOC 2R92K 3S14C 4AYBL 3H3VL 3HKZL 4MEYA 4Q4ZA 4BY1K 4LK0A 2YU9C 4C3JC 3S15C 3I4MK 4A3KC 3HOYC 4QIWL 5TMFA 4QJVA 1Y1VK 3PO2K 3FKIK 1WCMC 4Y7NC 2E2HC 2A69A 4A3BC 3I4NC 3DXJA 5IYDC 2BE5A 4AYBD 2R92C 3H3VD 5M5YK 4MQ9A 3HOXK 4C3IK 2NVQK 4BY1C 2B63K 4XSZA 2O5IA 2O5JA 3CQZK 3I4MC 4A3DK 4QIWD 1TWCK 1Y1VC 3PO2C 4QJVB 4LLGA 2PPBA 1TWHK 3HOXC 1XPPA 2NVQC 4KMUA 1SFOK 4YFNA 4C3IC 4A3IK 2B63C 4A3EK 5IYBK 3CQZC 3M4OC 4A3DC 1TWCC 1I6VA 2A68A 4OINA 1TWHC 2A6HA 3HOVK 3S2DK 4YFKA 3HOWK 5M3MK 4XLNA 3K7AK 1SFOC 2NVYK 4A3IC 5FJ8K 1Y1WK 4A3EC 5IYBC 3S1NK 1TWFC 4A3MK 4LJZA 5M5WK 1YNNA 4Y52K 1HQMA 3GTGK 5C44K 4MEXA 5M3FK 2VUMK 3HOWC 5C4JK 4A3GK 3HKZD 3K7AC 2YU9K 3S2HK 2R93K 2NVYC 5D4DA 1YNJA 3S1NC 2PA8L 4NOIA 4A3MC 4Y52C 5C3EK 3GTGC 2R7ZK 3FKIC 2CW0A 5C44C 4X6AK 3HOUK 3S1MK 1R9TK 2VUMC 1BDFA 4XSXA 5C4JC 4YG2A 4A3GC 2R93C 2PMZL 3S2HC 4C2MK 1TWAK 3GTPK 4A3LK 2PA8D 5TMCA 5IP7K 3S16K 5C3EC 2R7ZC 4X6AC 3H0GK 4A93K 5IP9K 1R9TC 3HOVC 3HOZC 2PMZD 4C2MC 3PO3K 4A3JK 3GTPC 1K83K 1TWAC 2E2IK 2WAQL 2JA6K 3GTJK 4G7HA 5IP7C 3S16C 3H0GC 3S2DC 2NVXK 3GTKK 4A93C 4BBRK 5IP9C 4OIRA 3PO3C 2A6EA 4A3JC 4A3FK 1K83C 1Y1WC 3S17K 2E2IC 3S1QK 1I3QK 4GZYA 5FLMK 1TWGK 4A3KK 1SMYA 4XLPA 2NVXC 4BBRC 3GTKC 1I6HK 3GTQK 4A3BK 4OIPA 4A3FC 3S17C 5IYCK 3HOZK 4BXXK 3S1QC 1I3QC 4Q5SA 5FLMC 1TWGC 3S1RK 3HOUC 5M5XK 3GTMK 3S1MC 1ZYRA 3M3YK 3EQLA 1I50K 1I6HC 4A3CK 3GTQC 5C4XK 4OIOA 3RZDK 2WB1L 2JA7K 4KN7A 5IYCC 4BXXC 4A3LC 2NVTK 4BY7K 2E2JK 3RZOK 4ZH4A 4YFXA 3S1RC 3M4OK 1IW7A 4BBSK 3GTMC 4C3HK 2JA8K 3GTLK 3M3YC 2Y0SL 1I50C 4JK1A 4A3CC 2JA5K 5C4XC 3RZDC 2WB1D 3WODA 2JA7C 4OIQA 3GTOK 3S14K 2WAQD 4BY7C 4LK1A 2JA6C 2NVTC 4G7OA 3GTJC
chains in the Genus database with same CATH superfamily
3PIOS 1EH1A 5IOSA 4KN4A 4C3HC 4Y7NK 4G0UA 3GTOC 4AYBL 3HKZL 4MEYA 1TWAA 4A3KC 4QIWL 5TMFA 4XCHA 3OPFA 2KXYA 4A3BC 3H3VD 2BE5A 2R92C 1PJ7A 1AB4A 2O5JA 1K83A 4WCES 5HL7S 1VH2A 4GTBA 1Y1VC 4WFAS 2PPBA 4DDQA 3HOXC 2KWAA 4A3IK 4C45A 4A3EK 1JVIA 4A3DC 1TWGA 4YFKA 1ZXOA 4PAAA 2GSNA 1HQMA 5IORA 3SZZA 3GTMA 3HKZD 2R93K 1XXAA 4IOCS 1YNJA 4LOWA 4A3MC 4G0VA 4Y52C 1XZQA 3SZYA 3GEEA 3HOZK 2VUMC 1BDFA 3HOVK 4YG2A 3GTLA 3GTPK 2JA5A 5C3EC 2YU9A 1XZQB 3H0GK 1O26A 3TFJA 2PMZD 4C2MC 1TWAC 3A8JA 4GTEA 1BGWA 1DCPA 4O2DA 4BBRK 4GTLA 1DCHA 3GDZA 2V6TA 4A3JC 4A3FK 3MMLB 1K83C 4FZBA 1IE0A 1USOA 2B63A 4WILA 2FQTA 3GTQK 1TWCA 4M1XA 5DM6S 1TWHA 2L5NA 4BY7C 1SFOA 1TWGC 5C4XK 4OIOA 2JA7K 1YX2A 3L4KA 1VRQC 5IOTA 4BY7K 4ZH4A 2NVYA 3M4OK 3GTMC 2W7VA 4C3HK 3M3YC 4JK1A 4A3CC 5EGEA 3RZDC 3FKIA 3GTOK 4BKWA 3VA7A 4LK1A 2NVTC 2ZJPS 3N0BA 1ZQ1C 3GTLC 2JA5C 2R7ZA 2R92K 3H3VL 1INNA 1R9TA 2YU9C 2GSUA 4C3JC 3AQPA 3HOYC 1Y1VK 3FKIK 3A8IA 4KDDA 3I4NC 3Q3QA 3HOXK 3DXJA 5IYDC 5M5YK 1O2AA 4MQ9A 4AH6A 2O5IA 3I4MC 1Y1WA 4A3DK 3PO2C 3FHZA 1J98A 1WQGA 3GTKA 4YFNA 2B63C 3M4OC 1TWCC 1F7VA 4OINA 1TWHC 2A6HA 3S2DK 1GE9A 4XLNA 1SFOC 1JQWA 5FJ8K 1Y1WK 1O24A 5IYBC 4A3MK 4LJZA 4Y52K 1EI6A 4P9SA 1WIHA 2VUMK 4GTCA 2NVYC 4WF9S 1ISEA 4P5BA 1RU0A 3S1NC 5C3EK 3FKIC 5C44C 5EGHA 4BLBA 3HOUK 3S1MK 4XSXA 5C4JC 2PMZL 4A3GC 4C2MK 3S2HC 1TWAK 2R7ZC 3DLLS 3LYWA 3QX3A 1R9TC 3OREA 2ZFZA 4A3JK 1WCMA 1K83K 2E2HA 2WAQL 3LAPA 3S16C 1WSVA 3S2DC 5IOQA 2PHCB 5E68A 5IP9C 1B4BA 3PO3C 1Y1WC 1C0AA 1TWGK 1SMYA 4XLPA 3GTKC 1XXCA 3CQZA 4OIPA 3S17C 4KATA 3S1QC 5FLMC 3TFIA 4FM9A 3HOUC 3N3YA 1TWFA 3S1MC 3T02A 5M5XK 1F7UA 3GTMK 1I6HC 3M3YK 4A3CK 3RZDK 4KN7A 3OEPA 1J6WA 5IYCC 2NVTK 4YFXA 3GTLK 2P5MA 2JA5K 4IOAS 3GTGA 2WB1D 3WODA 5JVHS 2WAQD 1ZBSA 3T00A 2YU9K 2E2JC 3CAGA 4C3JK 1TWFK 2Y3PA 1FEUA 3HOYK 2KPUA 2JA8C 3GEHA 2ZJRS 2Y0SD 5JFEA 3I4NK 5IYDK 3S14C 1XXBA 4KM9A 2GSOA 4LK0A 3G4AA 4KARA 3S15C 3I4MK 4QJVA 1WSRA 3PO2K 1WCMC 2E2HC 3GIRA 1WOSA 4BY1C 2B63K 4XSZA 4KMHA 1WORA 1TWCK 4QJVB 1PJ5A 1TWHK 2XCOA 4RMFA 2NVQC 4KMUA 1VGXA 1SFOK 2NVXA 4C3IC 3AD7C 5IYBK 3CQZC 3TTGA 1I3QA 4IO9S 5HL8A 4GFQA 1YCLA 1KQ4A 2NVYK 3S1NK 1TWFC 1YNNA 5C44K 3GEIA 5M3FK 3HOWC 5C4JK 3A8KA 3K7AC 5TJ3A 1BS2A 3S2HK 4A3GK 5D4DA 3GSIA 2JA6A 3GTGC 3GTJA 2R7ZK 2GAGC 1R9TK 3AD8C 1F93A 1ZVUA 4A3LK 4WJ3M 2PA8D 5TMCA 3S16K 3BP8C 1WQFA 4X6AC 2RGRA 3S0XA 5IP9K 4KB2A 3PO3K 3TFHA 3T01A 1G51A 1BJTA 2JA6K 1WOPA 3GTJK 3NUHA 5IP7C 3LPXA 2RH6A 4KASA 4A93C 1JOEA 3V4GA 3GTKK 4OIRA 3FOEA 3S17K 2E2IC 3S1QK 5FLMK 2ZJQS 1O28A 2NVXC 1I6HK 1O29A 3G4CA 4WJ4A 5IYCK 1I3QC 5JVOA 4WFNS 3FOFA 4ILDA 5JVGS 2WB1L 1EK8A 4BXXC 4A3LC 1O27A 2E2JK 3IPJA 3S1RC 1WQHA 1IW7A 2KQ1A 2JA8K 2JH3A 1VLOA 1I50C 2Y0SL 3HXAA 2EBBA 1PJ6A 3S14K 1DCOA 4GTFA 2JA6C 4G7OA 3GTJC 1J6VA 3S15K 3RZOC 1X31C 2R93A 2V6SA 4G7ZA 4BBSC 1WCMK 2E2HK 4GTAA 4BY1K 4Q4ZA 5DM7S 3GTPA 3JSTA 4Y7NC 2P8TA 2A69A 3H0GA 4AYBD 1O25A 2NVQK 4C3IK 1F9NA 3CQZK 4QIWD 5L46A 4LLGA 2XCRB 1IL2A 1XPPA 3CF5S 1I6VA 2A68A 1VJEA 1IS1A 1USMA 2L3UA 3HOWK 5M3MK 4U67S 3K7AK 4WFBS 1UV7A 5HQHA 4A3IC 3GTQA 3ERED 2V6UA 4A3EC 5M5WK 4GTDA 1L0WA 3GTGK 1O2BA 2FQOA 4MEXA 3N0CA 4G0WA 2JA7A 1EQRA 4KMAA 2PA8L 2E2IA 4NOIA 2XCQA 4KB4A 2CW0A 4X6AK 1O2FB 1XZPA 3AH5A 2ZUFA 2R93C 3GTOA 3LAJA 1B4AA 5IP7K 4KAWX 4J3NA 4GT9A 4A93K 1XZPB 3HOZC 3HOVC 1IQ0A 3GTPC 1DD5A 2E2IK 4LQYA 2R92A 4G7HA 1EFWA 3PIPS 3AQOA 3H0GC 2NVXK 1V5VA 3BP3A 2A6EA 1Y1VA 1I50A 3BUEA 1J6XA 2ZUEA 1I3QK 4P5AA 4GZYA 4LR2A 4A3KK 4BBRC 1HI9A 4A3BK 4A3FC 4BXXK 4Q5SA 3AD9C 3S1RK 5CJ9A 1ZYRA 4KMDA 3EQLA 1I50K 3L4JA 3GTQC 4PABA 2CFAA 3ADAC 4KM8A 3RZOK 4KC6A 4BBSK 4BLAA 2GAHC 1IBAA 5C4XC 2JA7C 4OIQA 5CHPA 1WOOA 2CFAB 2D6FC 2VUMA
chains in the Genus database with same CATH topology
2E2JC 4C3JK 3RZOC 3S15K 1TWFK 4G7ZA 3HOYK 4KN4A 4BBSC 4C3HC 2JA8C 3GTLC 2Y0SD 2JA5C 1WCMK 4Y7NK 2E2HK 3I4NK 5IYDK 3GTOC 2R92K 3S14C 4AYBL 3H3VL 3HKZL 4MEYA 4Q4ZA 4BY1K 4LK0A 2YU9C 4C3JC 3S15C 3I4MK 4A3KC 3HOYC 4QIWL 5TMFA 4QJVA 1Y1VK 3PO2K 3FKIK 1WCMC 4Y7NC 2E2HC 2A69A 4A3BC 3I4NC 3DXJA 5IYDC 2BE5A 4AYBD 2R92C 3H3VD 5M5YK 4MQ9A 3HOXK 4C3IK 2NVQK 4BY1C 2B63K 4XSZA 2O5IA 2O5JA 3CQZK 3I4MC 4A3DK 4QIWD 1TWCK 1Y1VC 3PO2C 4QJVB 4LLGA 2PPBA 1TWHK 3HOXC 1XPPA 2NVQC 4KMUA 1SFOK 4YFNA 4C3IC 4A3IK 2B63C 4A3EK 5IYBK 3CQZC 3M4OC 4A3DC 1TWCC 1I6VA 2A68A 4OINA 1TWHC 2A6HA 3HOVK 3S2DK 4YFKA 3HOWK 5M3MK 4XLNA 3K7AK 1SFOC 2NVYK 4A3IC 5FJ8K 1Y1WK 4A3EC 5IYBC 3S1NK 1TWFC 4A3MK 4LJZA 5M5WK 1YNNA 4Y52K 1HQMA 3GTGK 5C44K 4MEXA 5M3FK 2VUMK 3HOWC 5C4JK 4A3GK 3HKZD 3K7AC 2YU9K 3S2HK 2R93K 2NVYC 5D4DA 1YNJA 3S1NC 2PA8L 4NOIA 4A3MC 4Y52C 5C3EK 3GTGC 2R7ZK 3FKIC 2CW0A 5C44C 4X6AK 3HOUK 3S1MK 1R9TK 2VUMC 1BDFA 4XSXA 5C4JC 4YG2A 4A3GC 2R93C 2PMZL 3S2HC 4C2MK 1TWAK 3GTPK 4A3LK 2PA8D 5TMCA 5IP7K 3S16K 5C3EC 2R7ZC 4X6AC 3H0GK 4A93K 5IP9K 1R9TC 3HOVC 3HOZC 2PMZD 4C2MC 3PO3K 4A3JK 3GTPC 1K83K 1TWAC 2E2IK 2WAQL 2JA6K 3GTJK 4G7HA 5IP7C 3S16C 3H0GC 3S2DC 2NVXK 3GTKK 4A93C 4BBRK 5IP9C 4OIRA 3PO3C 2A6EA 4A3JC 4A3FK 1K83C 1Y1WC 3S17K 2E2IC 3S1QK 1I3QK 4GZYA 5FLMK 1TWGK 4A3KK 1SMYA 4XLPA 2NVXC 4BBRC 3GTKC 1I6HK 3GTQK 4A3BK 4OIPA 4A3FC 3S17C 5IYCK 3HOZK 4BXXK 3S1QC 1I3QC 4Q5SA 5FLMC 1TWGC 3S1RK 3HOUC 5M5XK 3GTMK 3S1MC 1ZYRA 3M3YK 3EQLA 1I50K 1I6HC 4A3CK 3GTQC 5C4XK 4OIOA 3RZDK 2WB1L 2JA7K 4KN7A 5IYCC 4BXXC 4A3LC 2NVTK 4BY7K 2E2JK 3RZOK 4ZH4A 4YFXA 3S1RC 3M4OK 1IW7A 4BBSK 3GTMC 4C3HK 2JA8K 3GTLK 3M3YC 2Y0SL 1I50C 4JK1A 4A3CC 2JA5K 5C4XC 3RZDC 2WB1D 3WODA 2JA7C 4OIQA 3GTOK 3S14K 2WAQD 4BY7C 4LK1A 2JA6C 2NVTC 4G7OA 3GTJC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2E2J C;  4C3J K;  3RZO C;  3S15 K;  1TWF K;  4G7Z A;  3HOY K;  4KN4 A;  4BBS C;  4C3H C;  2JA8 C;  3GTL C;  2Y0S D;  2JA5 C;  1WCM K;  4Y7N K;  2E2H K;  3I4N K;  5IYD K;  3GTO C;  2R92 K;  3S14 C;  4AYB L;  3H3V L;  3HKZ L;  4MEY A;  4Q4Z A;  4BY1 K;  4LK0 A;  2YU9 C;  4C3J C;  3S15 C;  3I4M K;  4A3K C;  3HOY C;  4QIW L;  5TMF A;  4QJV A;  1Y1V K;  3PO2 K;  3FKI K;  1WCM C;  4Y7N C;  2E2H C;  2A69 A;  4A3B C;  3I4N C;  3DXJ A;  5IYD C;  2BE5 A;  4AYB D;  2R92 C;  3H3V D;  5M5Y K;  4MQ9 A;  3HOX K;  4C3I K;  2NVQ K;  4BY1 C;  2B63 K;  4XSZ A;  2O5I A;  2O5J A;  3CQZ K;  3I4M C;  4A3D K;  4QIW D;  1TWC K;  1Y1V C;  3PO2 C;  4QJV B;  4LLG A;  2PPB A;  1TWH K;  3HOX C;  1XPP A;  2NVQ C;  4KMU A;  1SFO K;  4YFN A;  4C3I C;  4A3I K;  2B63 C;  4A3E K;  5IYB K;  3CQZ C;  3M4O C;  4A3D C;  1TWC C;  1I6V A;  2A68 A;  4OIN A;  1TWH C;  2A6H A;  3HOV K;  3S2D K;  4YFK A;  3HOW K;  5M3M K;  4XLN A;  3K7A K;  1SFO C;  2NVY K;  4A3I C;  5FJ8 K;  1Y1W K;  4A3E C;  5IYB C;  3S1N K;  1TWF C;  4A3M K;  4LJZ A;  5M5W K;  1YNN A;  4Y52 K;  1HQM A;  3GTG K;  5C44 K;  4MEX A;  5M3F K;  2VUM K;  3HOW C;  5C4J K;  4A3G K;  3HKZ D;  3K7A C;  2YU9 K;  3S2H K;  2R93 K;  2NVY C;  5D4D A;  1YNJ A;  3S1N C;  2PA8 L;  4NOI A;  4A3M C;  4Y52 C;  5C3E K;  3GTG C;  2R7Z K;  3FKI C;  2CW0 A;  5C44 C;  4X6A K;  3HOU K;  3S1M K;  1R9T K;  2VUM C;  1BDF A;  4XSX A;  5C4J C;  4YG2 A;  4A3G C;  2R93 C;  2PMZ L;  3S2H C;  4C2M K;  1TWA K;  3GTP K;  4A3L K;  2PA8 D;  5TMC A;  5IP7 K;  3S16 K;  5C3E C;  2R7Z C;  4X6A C;  3H0G K;  4A93 K;  5IP9 K;  1R9T C;  3HOV C;  3HOZ C;  2PMZ D;  4C2M C;  3PO3 K;  4A3J K;  3GTP C;  1K83 K;  1TWA C;  2E2I K;  2WAQ L;  2JA6 K;  3GTJ K;  4G7H A;  5IP7 C;  3S16 C;  3H0G C;  3S2D C;  2NVX K;  3GTK K;  4A93 C;  4BBR K;  5IP9 C;  4OIR A;  3PO3 C;  2A6E A;  4A3J C;  4A3F K;  1K83 C;  1Y1W C;  3S17 K;  2E2I C;  3S1Q K;  1I3Q K;  4GZY A;  5FLM K;  1TWG K;  4A3K K;  1SMY A;  4XLP A;  2NVX C;  4BBR C;  3GTK C;  1I6H K;  3GTQ K;  4A3B K;  4OIP A;  4A3F C;  3S17 C;  5IYC K;  3HOZ K;  4BXX K;  3S1Q C;  1I3Q C;  4Q5S A;  5FLM C;  1TWG C;  3S1R K;  3HOU C;  5M5X K;  3GTM K;  3S1M C;  1ZYR A;  3M3Y K;  3EQL A;  1I50 K;  1I6H C;  4A3C K;  3GTQ C;  5C4X K;  4OIO A;  3RZD K;  2WB1 L;  2JA7 K;  4KN7 A;  5IYC C;  4BXX C;  4A3L C;  2NVT K;  4BY7 K;  2E2J K;  3RZO K;  4ZH4 A;  4YFX A;  3S1R C;  3M4O K;  1IW7 A;  4BBS K;  3GTM C;  4C3H K;  2JA8 K;  3GTL K;  3M3Y C;  2Y0S L;  1I50 C;  4JK1 A;  4A3C C;  2JA5 K;  5C4X C;  3RZD C;  2WB1 D;  3WOD A;  2JA7 C;  4OIQ A;  3GTO K;  3S14 K;  2WAQ D;  4BY7 C;  4LK1 A;  2JA6 C;  2NVT C;  4G7O A;  3GTJ C; 
#chains in the Genus database with same CATH topology
 3PIO S;  1EH1 A;  5IOS A;  4KN4 A;  4C3H C;  4Y7N K;  4G0U A;  3GTO C;  4AYB L;  3HKZ L;  4MEY A;  1TWA A;  4A3K C;  4QIW L;  5TMF A;  4XCH A;  3OPF A;  2KXY A;  4A3B C;  3H3V D;  2BE5 A;  2R92 C;  1PJ7 A;  1AB4 A;  2O5J A;  1K83 A;  4WCE S;  5HL7 S;  1VH2 A;  4GTB A;  1Y1V C;  4WFA S;  2PPB A;  4DDQ A;  3HOX C;  2KWA A;  4A3I K;  4C45 A;  4A3E K;  1JVI A;  4A3D C;  1TWG A;  4YFK A;  1ZXO A;  4PAA A;  2GSN A;  1HQM A;  5IOR A;  3SZZ A;  3GTM A;  3HKZ D;  2R93 K;  1XXA A;  4IOC S;  1YNJ A;  4LOW A;  4A3M C;  4G0V A;  4Y52 C;  1XZQ A;  3SZY A;  3GEE A;  3HOZ K;  2VUM C;  1BDF A;  3HOV K;  4YG2 A;  3GTL A;  3GTP K;  2JA5 A;  5C3E C;  2YU9 A;  1XZQ B;  3H0G K;  1O26 A;  3TFJ A;  2PMZ D;  4C2M C;  1TWA C;  3A8J A;  4GTE A;  1BGW A;  1DCP A;  4O2D A;  4BBR K;  4GTL A;  1DCH A;  3GDZ A;  2V6T A;  4A3J C;  4A3F K;  3MML B;  1K83 C;  4FZB A;  1IE0 A;  1USO A;  2B63 A;  4WIL A;  2FQT A;  3GTQ K;  1TWC A;  4M1X A;  5DM6 S;  1TWH A;  2L5N A;  4BY7 C;  1SFO A;  1TWG C;  5C4X K;  4OIO A;  2JA7 K;  1YX2 A;  3L4K A;  1VRQ C;  5IOT A;  4BY7 K;  4ZH4 A;  2NVY A;  3M4O K;  3GTM C;  2W7V A;  4C3H K;  3M3Y C;  4JK1 A;  4A3C C;  5EGE A;  3RZD C;  3FKI A;  3GTO K;  4BKW A;  3VA7 A;  4LK1 A;  2NVT C;  2ZJP S;  3N0B A;  1ZQ1 C;  3GTL C;  2JA5 C;  2R7Z A;  2R92 K;  3H3V L;  1INN A;  1R9T A;  2YU9 C;  2GSU A;  4C3J C;  3AQP A;  3HOY C;  1Y1V K;  3FKI K;  3A8I A;  4KDD A;  3I4N C;  3Q3Q A;  3HOX K;  3DXJ A;  5IYD C;  5M5Y K;  1O2A A;  4MQ9 A;  4AH6 A;  2O5I A;  3I4M C;  1Y1W A;  4A3D K;  3PO2 C;  3FHZ A;  1J98 A;  1WQG A;  3GTK A;  4YFN A;  2B63 C;  3M4O C;  1TWC C;  1F7V A;  4OIN A;  1TWH C;  2A6H A;  3S2D K;  1GE9 A;  4XLN A;  1SFO C;  1JQW A;  5FJ8 K;  1Y1W K;  1O24 A;  5IYB C;  4A3M K;  4LJZ A;  4Y52 K;  1EI6 A;  4P9S A;  1WIH A;  2VUM K;  4GTC A;  2NVY C;  4WF9 S;  1ISE A;  4P5B A;  1RU0 A;  3S1N C;  5C3E K;  3FKI C;  5C44 C;  5EGH A;  4BLB A;  3HOU K;  3S1M K;  4XSX A;  5C4J C;  2PMZ L;  4A3G C;  4C2M K;  3S2H C;  1TWA K;  2R7Z C;  3DLL S;  3LYW A;  3QX3 A;  1R9T C;  3ORE A;  2ZFZ A;  4A3J K;  1WCM A;  1K83 K;  2E2H A;  2WAQ L;  3LAP A;  3S16 C;  1WSV A;  3S2D C;  5IOQ A;  2PHC B;  5E68 A;  5IP9 C;  1B4B A;  3PO3 C;  1Y1W C;  1C0A A;  1TWG K;  1SMY A;  4XLP A;  3GTK C;  1XXC A;  3CQZ A;  4OIP A;  3S17 C;  4KAT A;  3S1Q C;  5FLM C;  3TFI A;  4FM9 A;  3HOU C;  3N3Y A;  1TWF A;  3S1M C;  3T02 A;  5M5X K;  1F7U A;  3GTM K;  1I6H C;  3M3Y K;  4A3C K;  3RZD K;  4KN7 A;  3OEP A;  1J6W A;  5IYC C;  2NVT K;  4YFX A;  3GTL K;  2P5M A;  2JA5 K;  4IOA S;  3GTG A;  2WB1 D;  3WOD A;  5JVH S;  2WAQ D;  1ZBS A;  3T00 A;  2YU9 K;  2E2J C;  3CAG A;  4C3J K;  1TWF K;  2Y3P A;  1FEU A;  3HOY K;  2KPU A;  2JA8 C;  3GEH A;  2ZJR S;  2Y0S D;  5JFE A;  3I4N K;  5IYD K;  3S14 C;  1XXB A;  4KM9 A;  2GSO A;  4LK0 A;  3G4A A;  4KAR A;  3S15 C;  3I4M K;  4QJV A;  1WSR A;  3PO2 K;  1WCM C;  2E2H C;  3GIR A;  1WOS A;  4BY1 C;  2B63 K;  4XSZ A;  4KMH A;  1WOR A;  1TWC K;  4QJV B;  1PJ5 A;  1TWH K;  2XCO A;  4RMF A;  2NVQ C;  4KMU A;  1VGX A;  1SFO K;  2NVX A;  4C3I C;  3AD7 C;  5IYB K;  3CQZ C;  3TTG A;  1I3Q A;  4IO9 S;  5HL8 A;  4GFQ A;  1YCL A;  1KQ4 A;  2NVY K;  3S1N K;  1TWF C;  1YNN A;  5C44 K;  3GEI A;  5M3F K;  3HOW C;  5C4J K;  3A8K A;  3K7A C;  5TJ3 A;  1BS2 A;  3S2H K;  4A3G K;  5D4D A;  3GSI A;  2JA6 A;  3GTG C;  3GTJ A;  2R7Z K;  2GAG C;  1R9T K;  3AD8 C;  1F93 A;  1ZVU A;  4A3L K;  4WJ3 M;  2PA8 D;  5TMC A;  3S16 K;  3BP8 C;  1WQF A;  4X6A C;  2RGR A;  3S0X A;  5IP9 K;  4KB2 A;  3PO3 K;  3TFH A;  3T01 A;  1G51 A;  1BJT A;  2JA6 K;  1WOP A;  3GTJ K;  3NUH A;  5IP7 C;  3LPX A;  2RH6 A;  4KAS A;  4A93 C;  1JOE A;  3V4G A;  3GTK K;  4OIR A;  3FOE A;  3S17 K;  2E2I C;  3S1Q K;  5FLM K;  2ZJQ S;  1O28 A;  2NVX C;  1I6H K;  1O29 A;  3G4C A;  4WJ4 A;  5IYC K;  1I3Q C;  5JVO A;  4WFN S;  3FOF A;  4ILD A;  5JVG S;  2WB1 L;  1EK8 A;  4BXX C;  4A3L C;  1O27 A;  2E2J K;  3IPJ A;  3S1R C;  1WQH A;  1IW7 A;  2KQ1 A;  2JA8 K;  2JH3 A;  1VLO A;  1I50 C;  2Y0S L;  3HXA A;  2EBB A;  1PJ6 A;  3S14 K;  1DCO A;  4GTF A;  2JA6 C;  4G7O A;  3GTJ C;  1J6V A;  3S15 K;  3RZO C;  1X31 C;  2R93 A;  2V6S A;  4G7Z A;  4BBS C;  1WCM K;  2E2H K;  4GTA A;  4BY1 K;  4Q4Z A;  5DM7 S;  3GTP A;  3JST A;  4Y7N C;  2P8T A;  2A69 A;  3H0G A;  4AYB D;  1O25 A;  2NVQ K;  4C3I K;  1F9N A;  3CQZ K;  4QIW D;  5L46 A;  4LLG A;  2XCR B;  1IL2 A;  1XPP A;  3CF5 S;  1I6V A;  2A68 A;  1VJE A;  1IS1 A;  1USM A;  2L3U A;  3HOW K;  5M3M K;  4U67 S;  3K7A K;  4WFB S;  1UV7 A;  5HQH A;  4A3I C;  3GTQ A;  3ERE D;  2V6U A;  4A3E C;  5M5W K;  4GTD A;  1L0W A;  3GTG K;  1O2B A;  2FQO A;  4MEX A;  3N0C A;  4G0W A;  2JA7 A;  1EQR A;  4KMA A;  2PA8 L;  2E2I A;  4NOI A;  2XCQ A;  4KB4 A;  2CW0 A;  4X6A K;  1O2F B;  1XZP A;  3AH5 A;  2ZUF A;  2R93 C;  3GTO A;  3LAJ A;  1B4A A;  5IP7 K;  4KAW X;  4J3N A;  4GT9 A;  4A93 K;  1XZP B;  3HOZ C;  3HOV C;  1IQ0 A;  3GTP C;  1DD5 A;  2E2I K;  4LQY A;  2R92 A;  4G7H A;  1EFW A;  3PIP S;  3AQO A;  3H0G C;  2NVX K;  1V5V A;  3BP3 A;  2A6E A;  1Y1V A;  1I50 A;  3BUE A;  1J6X A;  2ZUE A;  1I3Q K;  4P5A A;  4GZY A;  4LR2 A;  4A3K K;  4BBR C;  1HI9 A;  4A3B K;  4A3F C;  4BXX K;  4Q5S A;  3AD9 C;  3S1R K;  5CJ9 A;  1ZYR A;  4KMD A;  3EQL A;  1I50 K;  3L4J A;  3GTQ C;  4PAB A;  2CFA A;  3ADA C;  4KM8 A;  3RZO K;  4KC6 A;  4BBS K;  4BLA A;  2GAH C;  1IBA A;  5C4X C;  2JA7 C;  4OIQ A;  5CHP A;  1WOO A;  2CFA B;  2D6F C;  2VUM A; 
#chains in the Genus database with same CATH homology
 2E2J C;  4C3J K;  3RZO C;  3S15 K;  1TWF K;  4G7Z A;  3HOY K;  4KN4 A;  4BBS C;  4C3H C;  2JA8 C;  3GTL C;  2Y0S D;  2JA5 C;  1WCM K;  4Y7N K;  2E2H K;  3I4N K;  5IYD K;  3GTO C;  2R92 K;  3S14 C;  4AYB L;  3H3V L;  3HKZ L;  4MEY A;  4Q4Z A;  4BY1 K;  4LK0 A;  2YU9 C;  4C3J C;  3S15 C;  3I4M K;  4A3K C;  3HOY C;  4QIW L;  5TMF A;  4QJV A;  1Y1V K;  3PO2 K;  3FKI K;  1WCM C;  4Y7N C;  2E2H C;  2A69 A;  4A3B C;  3I4N C;  3DXJ A;  5IYD C;  2BE5 A;  4AYB D;  2R92 C;  3H3V D;  5M5Y K;  4MQ9 A;  3HOX K;  4C3I K;  2NVQ K;  4BY1 C;  2B63 K;  4XSZ A;  2O5I A;  2O5J A;  3CQZ K;  3I4M C;  4A3D K;  4QIW D;  1TWC K;  1Y1V C;  3PO2 C;  4QJV B;  4LLG A;  2PPB A;  1TWH K;  3HOX C;  1XPP A;  2NVQ C;  4KMU A;  1SFO K;  4YFN A;  4C3I C;  4A3I K;  2B63 C;  4A3E K;  5IYB K;  3CQZ C;  3M4O C;  4A3D C;  1TWC C;  1I6V A;  2A68 A;  4OIN A;  1TWH C;  2A6H A;  3HOV K;  3S2D K;  4YFK A;  3HOW K;  5M3M K;  4XLN A;  3K7A K;  1SFO C;  2NVY K;  4A3I C;  5FJ8 K;  1Y1W K;  4A3E C;  5IYB C;  3S1N K;  1TWF C;  4A3M K;  4LJZ A;  5M5W K;  1YNN A;  4Y52 K;  1HQM A;  3GTG K;  5C44 K;  4MEX A;  5M3F K;  2VUM K;  3HOW C;  5C4J K;  4A3G K;  3HKZ D;  3K7A C;  2YU9 K;  3S2H K;  2R93 K;  2NVY C;  5D4D A;  1YNJ A;  3S1N C;  2PA8 L;  4NOI A;  4A3M C;  4Y52 C;  5C3E K;  3GTG C;  2R7Z K;  3FKI C;  2CW0 A;  5C44 C;  4X6A K;  3HOU K;  3S1M K;  1R9T K;  2VUM C;  1BDF A;  4XSX A;  5C4J C;  4YG2 A;  4A3G C;  2R93 C;  2PMZ L;  3S2H C;  4C2M K;  1TWA K;  3GTP K;  4A3L K;  2PA8 D;  5TMC A;  5IP7 K;  3S16 K;  5C3E C;  2R7Z C;  4X6A C;  3H0G K;  4A93 K;  5IP9 K;  1R9T C;  3HOV C;  3HOZ C;  2PMZ D;  4C2M C;  3PO3 K;  4A3J K;  3GTP C;  1K83 K;  1TWA C;  2E2I K;  2WAQ L;  2JA6 K;  3GTJ K;  4G7H A;  5IP7 C;  3S16 C;  3H0G C;  3S2D C;  2NVX K;  3GTK K;  4A93 C;  4BBR K;  5IP9 C;  4OIR A;  3PO3 C;  2A6E A;  4A3J C;  4A3F K;  1K83 C;  1Y1W C;  3S17 K;  2E2I C;  3S1Q K;  1I3Q K;  4GZY A;  5FLM K;  1TWG K;  4A3K K;  1SMY A;  4XLP A;  2NVX C;  4BBR C;  3GTK C;  1I6H K;  3GTQ K;  4A3B K;  4OIP A;  4A3F C;  3S17 C;  5IYC K;  3HOZ K;  4BXX K;  3S1Q C;  1I3Q C;  4Q5S A;  5FLM C;  1TWG C;  3S1R K;  3HOU C;  5M5X K;  3GTM K;  3S1M C;  1ZYR A;  3M3Y K;  3EQL A;  1I50 K;  1I6H C;  4A3C K;  3GTQ C;  5C4X K;  4OIO A;  3RZD K;  2WB1 L;  2JA7 K;  4KN7 A;  5IYC C;  4BXX C;  4A3L C;  2NVT K;  4BY7 K;  2E2J K;  3RZO K;  4ZH4 A;  4YFX A;  3S1R C;  3M4O K;  1IW7 A;  4BBS K;  3GTM C;  4C3H K;  2JA8 K;  3GTL K;  3M3Y C;  2Y0S L;  1I50 C;  4JK1 A;  4A3C C;  2JA5 K;  5C4X C;  3RZD C;  2WB1 D;  3WOD A;  2JA7 C;  4OIQ A;  3GTO K;  3S14 K;  2WAQ D;  4BY7 C;  4LK1 A;  2JA6 C;  2NVT C;  4G7O A;  3GTJ C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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