3BP8C

Crystal structure of mlc/eiib complex
Total Genus 16
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
16
sequence length
75
structure length
75
Chain Sequence
MAPALVAAFGGKENITNLDACITRLRVSVADVSKVDQAGLKKLGAAGVVVAGSGVQAIFGTKSDNLKTEMDEYIR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transcription
source organism Escherichia coli
publication title Analyses of Mlc-IIBGlc interaction and a plausible molecular mechanism of Mlc inactivation by membrane sequestration
pubmed doi rcsb
molecule keywords Putative NAGC-like transcriptional regulator
total genus 16
structure length 75
sequence length 75
chains with identical sequence D
ec nomenclature ec 2.7.1.199: Protein-N(pi)-phosphohistidine--D-glucose phosphotransferase.
pdb deposition date 2007-12-18

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF00367 PTS_EIIB phosphotransferase system, EIIB
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.1360.60 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 Glucose permease domain IIB 3bp8C00
3BP8C 3IPJA 1O2FB 1IBAA 3BP3A
chains in the Genus database with same CATH superfamily
4A3GC 2A6HA 2O5IA 2JH3A 3MMLB 1WOPA 4A3KK 4QIWD 1K83A 3GTGK 5D4DA 2JA6C 3A8KA 4Y52C 3S1NC 4A3DC 4GTEA 1Y1WA 3S15C 3GTQK 5FLMC 3I4NC 1I50K 4A93C 4AH6A 3S16C 4P5BA 3GTMC 3T00A 1WORA 4BBSC 1TWHA 3GTJC 4C2MK 1SFOC 3ADAC 4GTCA 5L46A 4GTAA 2VUMA 1JOEA 1EFWA 3AD9C 4GTDA 1TWGK 2A6EA 3S1QK 1HI9A 4A3JC 5HL8A 4FM9A 4OIQA 1XZQA 5IYBK 4J3NA 2JA8C 4GTFA 2R7ZA 1XZQB 4KC6A 4NOIA 5C4JK 5M5WK 1K83C 3T01A 4P9SA 2GAHC 5IORA 3LAJA 1Y1WC 2YU9C 5IYDK 2FQOA 4G0WA 5M5YK 1O24A 1RU0A 3S0XA 3S1RK 3GEIA 3HOVC 4AYBL 1WSVA 4LK0A 3CQZA 5M3MK 3S14K 3HXAA 4WJ3M 1TWHC 4A3EK 3FHZA 2VUMC 4PABA 1WCMK 2BE5A 3OPFA 2JA7A 3AH5A 1WOOA 4C3JC 2NVTC 1HQMA 5FJ8K 3OREA 2R92A 2R7ZC 3GEHA 1ZXOA 4BBRC 1C0AA 4XCHA 1BJTA 1GE9A 3GTJK 1UV7A 1SFOK 4YFXA 3GEEA 4G7ZA 1VJEA 1PJ5A 3ERED 1EH1A 4A3JK 3M4OC 5TMCA 4OIPA 2NVQC 1XXCA 4DDQA 3WODA 2JA8K 1WQGA 4KM9A 5C44K 3CQZC 3GIRA 3IPJA 3S2HC 3L4KA 4XSZA 4A3CC 3TFHA 2E2HA 4O2DA 1K83K 3GTKA 3TFIA 1Y1WK 5IP7K 3Q3QA 2JA7C 2WAQD 5C3EC 4A3LC 4XLPA 1EQRA 1DCOA 1J6WA 4C3HK 2R92C 1XXAA 2CFAB 3A8JA 4FZBA 3A8IA 4GTBA 5IP9C 5E68A 2VUMK 3HOZC 3GTLK 4BY7C 5IOTA 3FKIA 1J6XA 2RGRA 3AQPA 4G0UA 4C3JK 1VLOA 4YFNA 4JK1A 2E2IA 5IYCK 1R9TK 4BBRK 3HOWC 1DCPA 2W7VA 4G7OA 2E2HC 4KN7A 4M1XA 3GTKC 1USMA 4MEXA 2D6FC 3S17C 4A3MK 1PJ7A 4KAWX 3SZZA 3CQZK 3H3VL 3FOFA 4YFKA 4GFQA 2PA8L 2R93A 4A3CK 3K7AK 3HOYC 5CJ9A 4KMAA 1PJ6A 3FKIC 2ZUEA 1TWCA 2O5JA 4ILDA 5IOSA 4A3LK 4ZH4A 1TWAA 4BY1C 4A3IK 2E2IC 1BDFA 2R92K 1WOSA 4Y7NC 2NVXA 2E2JC 2EBBA 3GTOA 1INNA 1WQHA 5IP9K 3GTPA 2NVYA 4Q4ZA 4Q5SA 1IQ0A 3CAGA 3RZDK 2YU9K 4X6AC 4A3GK 1B4BA 1O27A 1O2BA 2R93C 3N0BA 4QJVA 2E2HK 2JA6K 3S1NK 4Y52K 4A3DK 2JA5A 1YX2A 3GTKK 3FOEA 4KB2A 3NUHA 4BLBA 3S15K 1TWCC 3N0CA 1BS2A 1DD5A 5FLMK 3OEPA 3I4NK 4A93K 1I50A 3S16K 1TWAC 3HOXC 3GTMK 2Y0SL 4BXXC 4P5AA 1AB4A 4BBSK 2NVXC 3BP8C 4AYBD 1IW7A 3HOUC 3GTOC 4KB4A 2XCOA 3GTPC 3GDZA 2NVYC 4WILA 4YG2A 4KMHA 1TWGA 1USOA 1F7UA 4LQYA 1JVIA 1XZPA 1ISEA 4BY1K 4MQ9A 4LR2A 2GSNA 1EI6A 1XZPB 4KATA 1SMYA 3H0GA 3JSTA 1VH2A 2JA5C 1I6HC 1VGXA 2WB1L 2CW0A 4MEYA 2PMZL 1WSRA 3TFJA 3HKZL 2P8TA 5CHPA 4KASA 4A3FC 1I50C 3LPXA 3HOVK 1YCLA 1O2AA 2FQTA 1O2FB 1IBAA 1TWHK 2R93K 4KARA 4BLAA 2B63A 1TWFA 4BKWA 4KMDA 1WCMA 1TWGC 5C4XC 1TWCK 2NVTK 1Y1VA 1F7VA 4KDDA 2PMZD 1IS1A 3HOXK 3N3YA 1J6VA 2R7ZK 4BXXK 4QIWL 4LOWA 3H0GC 1B4AA 2NVXK 1I6VA 3GTOK 4PAAA 1O28A 3AQOA 2NVYK 3T02A 3M4OK 2NVQK 5IOQA 3G4CA 3LAPA 5JVOA 3S2HK 3S14C 1IE0A 4A3BC 3M3YC 3S2DC 4A3EC 3PO2C 4WJ4A 2GAGC 1ZVUA 4LK1A 1I3QA 2B63C 4XSXA 2PHCB 1WQFA 2JA5K 1I6HK 1TWFC 1WCMC 2JA7K 3QX3A 1O26A 4XLNA 1Y1VC 5C3EK 1X31C 4A3FK 1XXBA 5M5XK 4G0VA 1G51A 4KMUA 3RZOC 1ZYRA 2PPBA 3AD8C 3TTGA 4G7HA 2V6TA 1WIHA 2P5MA 1O25A 3H3VD 3HOZK 2V6SA 2Y3PA 3GTLA 2PA8D 4BY7K 1VRQC 2RH6A 2V6UA 5C4XK 3S1MC 3I4MC 2ZFZA 3PO3C 1YNJA 1J98A 5C44C 3EQLA 1V5VA 1R9TA 1DCHA 3HOWK 1L0WA 3H0GK 3GTGA 1I3QC 5IP7C 4QJVB 3GTQA 1XPPA 4C3IC 3S17K 4C45A 2GSUA 4C3HC 2ZUFA 4KM8A 5EGEA 4A3BK 3M3YK 3HOYK 3S2DK 3PO2K 4RMFA 3BP3A 2B63K 3SZYA 3GTLC 1YNNA 3FKIK 1TWFK 2A68A 4GT9A 1IL2A 1Y1VK 2XCRB 5M3FK 3L4JA 2E2IK 4GZYA 5IYCC 3RZOK 1JQWA 1R9TC 4Y7NK 1ZBSA 2E2JK 2Y0SD 4A3KC 4OIRA 3GTGC 2WAQL 4LLGA 4OINA 3GTQC 3S1MK 3I4MK 5EGHA 4KN4A 3PO3K 2YU9A 4A3MC 4X6AK 1KQ4A 3GSIA 3VA7A 2A69A 4C2MC 3K7AC 3V4GA 2JA6A 1I3QK 3G4AA 5TMFA 3S1QC 5IYBC 5JFEA 4C3IK 2WB1D 5TJ3A 4OIOA 2CFAA 1TWAK 1EK8A 3DXJA 4A3IC 3GTMA 2KWAA 3HKZD 3AD7C 1F93A 3BUEA 1F9NA 1SFOA 5C4JC 3GTJA 1ZQ1C 3HOUK 1O29A 3GTPK 4LJZA 2GSOA 2XCQA 4GTLA 1BGWA 5IYDC 3RZDC 3S1RC
chains in the Genus database with same CATH topology
3BP8C 3IPJA 1O2FB 1IBAA 3BP3A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3BP8 C;  3IPJ A;  1O2F B;  1IBA A;  3BP3 A; 
#chains in the Genus database with same CATH topology
 4A3G C;  2A6H A;  2O5I A;  2JH3 A;  3MML B;  1WOP A;  4A3K K;  4QIW D;  1K83 A;  3GTG K;  5D4D A;  2JA6 C;  3A8K A;  4Y52 C;  3S1N C;  4A3D C;  4GTE A;  1Y1W A;  3S15 C;  3GTQ K;  5FLM C;  3I4N C;  1I50 K;  4A93 C;  4AH6 A;  3S16 C;  4P5B A;  3GTM C;  3T00 A;  1WOR A;  4BBS C;  1TWH A;  3GTJ C;  4C2M K;  1SFO C;  3ADA C;  4GTC A;  5L46 A;  4GTA A;  2VUM A;  1JOE A;  1EFW A;  3AD9 C;  4GTD A;  1TWG K;  2A6E A;  3S1Q K;  1HI9 A;  4A3J C;  5HL8 A;  4FM9 A;  4OIQ A;  1XZQ A;  5IYB K;  4J3N A;  2JA8 C;  4GTF A;  2R7Z A;  1XZQ B;  4KC6 A;  4NOI A;  5C4J K;  5M5W K;  1K83 C;  3T01 A;  4P9S A;  2GAH C;  5IOR A;  3LAJ A;  1Y1W C;  2YU9 C;  5IYD K;  2FQO A;  4G0W A;  5M5Y K;  1O24 A;  1RU0 A;  3S0X A;  3S1R K;  3GEI A;  3HOV C;  4AYB L;  1WSV A;  4LK0 A;  3CQZ A;  5M3M K;  3S14 K;  3HXA A;  4WJ3 M;  1TWH C;  4A3E K;  3FHZ A;  2VUM C;  4PAB A;  1WCM K;  2BE5 A;  3OPF A;  2JA7 A;  3AH5 A;  1WOO A;  4C3J C;  2NVT C;  1HQM A;  5FJ8 K;  3ORE A;  2R92 A;  2R7Z C;  3GEH A;  1ZXO A;  4BBR C;  1C0A A;  4XCH A;  1BJT A;  1GE9 A;  3GTJ K;  1UV7 A;  1SFO K;  4YFX A;  3GEE A;  4G7Z A;  1VJE A;  1PJ5 A;  3ERE D;  1EH1 A;  4A3J K;  3M4O C;  5TMC A;  4OIP A;  2NVQ C;  1XXC A;  4DDQ A;  3WOD A;  2JA8 K;  1WQG A;  4KM9 A;  5C44 K;  3CQZ C;  3GIR A;  3IPJ A;  3S2H C;  3L4K A;  4XSZ A;  4A3C C;  3TFH A;  2E2H A;  4O2D A;  1K83 K;  3GTK A;  3TFI A;  1Y1W K;  5IP7 K;  3Q3Q A;  2JA7 C;  2WAQ D;  5C3E C;  4A3L C;  4XLP A;  1EQR A;  1DCO A;  1J6W A;  4C3H K;  2R92 C;  1XXA A;  2CFA B;  3A8J A;  4FZB A;  3A8I A;  4GTB A;  5IP9 C;  5E68 A;  2VUM K;  3HOZ C;  3GTL K;  4BY7 C;  5IOT A;  3FKI A;  1J6X A;  2RGR A;  3AQP A;  4G0U A;  4C3J K;  1VLO A;  4YFN A;  4JK1 A;  2E2I A;  5IYC K;  1R9T K;  4BBR K;  3HOW C;  1DCP A;  2W7V A;  4G7O A;  2E2H C;  4KN7 A;  4M1X A;  3GTK C;  1USM A;  4MEX A;  2D6F C;  3S17 C;  4A3M K;  1PJ7 A;  4KAW X;  3SZZ A;  3CQZ K;  3H3V L;  3FOF A;  4YFK A;  4GFQ A;  2PA8 L;  2R93 A;  4A3C K;  3K7A K;  3HOY C;  5CJ9 A;  4KMA A;  1PJ6 A;  3FKI C;  2ZUE A;  1TWC A;  2O5J A;  4ILD A;  5IOS A;  4A3L K;  4ZH4 A;  1TWA A;  4BY1 C;  4A3I K;  2E2I C;  1BDF A;  2R92 K;  1WOS A;  4Y7N C;  2NVX A;  2E2J C;  2EBB A;  3GTO A;  1INN A;  1WQH A;  5IP9 K;  3GTP A;  2NVY A;  4Q4Z A;  4Q5S A;  1IQ0 A;  3CAG A;  3RZD K;  2YU9 K;  4X6A C;  4A3G K;  1B4B A;  1O27 A;  1O2B A;  2R93 C;  3N0B A;  4QJV A;  2E2H K;  2JA6 K;  3S1N K;  4Y52 K;  4A3D K;  2JA5 A;  1YX2 A;  3GTK K;  3FOE A;  4KB2 A;  3NUH A;  4BLB A;  3S15 K;  1TWC C;  3N0C A;  1BS2 A;  1DD5 A;  5FLM K;  3OEP A;  3I4N K;  4A93 K;  1I50 A;  3S16 K;  1TWA C;  3HOX C;  3GTM K;  2Y0S L;  4BXX C;  4P5A A;  1AB4 A;  4BBS K;  2NVX C;  3BP8 C;  4AYB D;  1IW7 A;  3HOU C;  3GTO C;  4KB4 A;  2XCO A;  3GTP C;  3GDZ A;  2NVY C;  4WIL A;  4YG2 A;  4KMH A;  1TWG A;  1USO A;  1F7U A;  4LQY A;  1JVI A;  1XZP A;  1ISE A;  4BY1 K;  4MQ9 A;  4LR2 A;  2GSN A;  1EI6 A;  1XZP B;  4KAT A;  1SMY A;  3H0G A;  3JST A;  1VH2 A;  2JA5 C;  1I6H C;  1VGX A;  2WB1 L;  2CW0 A;  4MEY A;  2PMZ L;  1WSR A;  3TFJ A;  3HKZ L;  2P8T A;  5CHP A;  4KAS A;  4A3F C;  1I50 C;  3LPX A;  3HOV K;  1YCL A;  1O2A A;  2FQT A;  1O2F B;  1IBA A;  1TWH K;  2R93 K;  4KAR A;  4BLA A;  2B63 A;  1TWF A;  4BKW A;  4KMD A;  1WCM A;  1TWG C;  5C4X C;  1TWC K;  2NVT K;  1Y1V A;  1F7V A;  4KDD A;  2PMZ D;  1IS1 A;  3HOX K;  3N3Y A;  1J6V A;  2R7Z K;  4BXX K;  4QIW L;  4LOW A;  3H0G C;  1B4A A;  2NVX K;  1I6V A;  3GTO K;  4PAA A;  1O28 A;  3AQO A;  2NVY K;  3T02 A;  3M4O K;  2NVQ K;  5IOQ A;  3G4C A;  3LAP A;  5JVO A;  3S2H K;  3S14 C;  1IE0 A;  4A3B C;  3M3Y C;  3S2D C;  4A3E C;  3PO2 C;  4WJ4 A;  2GAG C;  1ZVU A;  4LK1 A;  1I3Q A;  2B63 C;  4XSX A;  2PHC B;  1WQF A;  2JA5 K;  1I6H K;  1TWF C;  1WCM C;  2JA7 K;  3QX3 A;  1O26 A;  4XLN A;  1Y1V C;  5C3E K;  1X31 C;  4A3F K;  1XXB A;  5M5X K;  4G0V A;  1G51 A;  4KMU A;  3RZO C;  1ZYR A;  2PPB A;  3AD8 C;  3TTG A;  4G7H A;  2V6T A;  1WIH A;  2P5M A;  1O25 A;  3H3V D;  3HOZ K;  2V6S A;  2Y3P A;  3GTL A;  2PA8 D;  4BY7 K;  1VRQ C;  2RH6 A;  2V6U A;  5C4X K;  3S1M C;  3I4M C;  2ZFZ A;  3PO3 C;  1YNJ A;  1J98 A;  5C44 C;  3EQL A;  1V5V A;  1R9T A;  1DCH A;  3HOW K;  1L0W A;  3H0G K;  3GTG A;  1I3Q C;  5IP7 C;  4QJV B;  3GTQ A;  1XPP A;  4C3I C;  3S17 K;  4C45 A;  2GSU A;  4C3H C;  2ZUF A;  4KM8 A;  5EGE A;  4A3B K;  3M3Y K;  3HOY K;  3S2D K;  3PO2 K;  4RMF A;  3BP3 A;  2B63 K;  3SZY A;  3GTL C;  1YNN A;  3FKI K;  1TWF K;  2A68 A;  4GT9 A;  1IL2 A;  1Y1V K;  2XCR B;  5M3F K;  3L4J A;  2E2I K;  4GZY A;  5IYC C;  3RZO K;  1JQW A;  1R9T C;  4Y7N K;  1ZBS A;  2E2J K;  2Y0S D;  4A3K C;  4OIR A;  3GTG C;  2WAQ L;  4LLG A;  4OIN A;  3GTQ C;  3S1M K;  3I4M K;  5EGH A;  4KN4 A;  3PO3 K;  2YU9 A;  4A3M C;  4X6A K;  1KQ4 A;  3GSI A;  3VA7 A;  2A69 A;  4C2M C;  3K7A C;  3V4G A;  2JA6 A;  1I3Q K;  3G4A A;  5TMF A;  3S1Q C;  5IYB C;  5JFE A;  4C3I K;  2WB1 D;  5TJ3 A;  4OIO A;  2CFA A;  1TWA K;  1EK8 A;  3DXJ A;  4A3I C;  3GTM A;  2KWA A;  3HKZ D;  3AD7 C;  1F93 A;  3BUE A;  1F9N A;  1SFO A;  5C4J C;  3GTJ A;  1ZQ1 C;  3HOU K;  1O29 A;  3GTP K;  4LJZ A;  2GSO A;  2XCQ A;  4GTL A;  1BGW A;  5IYD C;  3RZD C;  3S1R C; 
#chains in the Genus database with same CATH homology
 3BP8 C;  3IPJ A;  1O2F B;  1IBA A;  3BP3 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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