4A3LC

Rna polymerase ii initial transcribing complex with a 7nt dna-rna hybrid and soaked with ampcpp
Total Genus 61
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
61
sequence length
266
structure length
266
Chain Sequence
b'EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD'
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1
publication title Structural basis of initial RNA polymerase II transcription.
pubmed doi rcsb
molecule tags Transcription
total genus 61
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-09-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 4a3lC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 4a3lC01
4Y52C 1BDFA 5C4XK 4C3JC 2NVQC 1TWGC 4A3LK 4BBSK 4C3IC 2JA7C 2R7ZC 5IYCC 5IYBC 3HKZD 4XSZA 3GTGC 3RZOC 3HKZL 2JA6C 1I50K 3CQZK 2A68A 4QJVA 1R9TK 3HOZK 1I6VA 4JK1A 4G7HA 3GTKK 5M5WK 5TMFA 5C44C 2R92C 4C2MC 3GTOK 3EQLA 4A3IC 3DXJA 4LLGA 1K83C 3M3YC 1TWAK 2E2IK 3GTQC 4A93C 1HQMA 3I4MK 2PPBA 3HOVK 3HOYC 4XSXA 2VUMC 4ZH4A 2NVYK 3GTJK 2E2JK 2B63K 2JA8K 3S1RC 3HOXC 3S15K 5C3EC 2R93C 1YNJA 4MQ9A 4AYBD 3GTMK 2JA5C 2NVXC 4A3CC 4A3DC 4AYBL 3S2DK 5D4DA 3FKIK 4Y52K 4YFKA 3PO3C 2NVTC 5FJ8K 1WCMC 4BBRC 5M5YK 1TWHC 4C3JK 5IP7C 1TWGK 2NVQK 1SFOC 3PO3K 4C3IK 4KN4A 2JA7K 3S17C 4X6AC 5IYCK 2R7ZK 3RZDC 5IYBK 4LK1A 4XLNA 3RZOK 4QIWD 4OINA 3S1NC 2JA6K 4QIWL 3GTGK 5FLMC 4BY7C 3WODA 4Y7NC 1TWFC 4YFNA 4A3KC 1TWCC 4BXXC 3I4NC 2WAQD 1Y1VC 5C4JC 4C3HC 2WAQL 5M3MK 5TMCA 5M3FK 5C44K 5IP9C 4C2MK 4A3IK 3M3YK 1K83K 4OIRA 2PMZD 4XLPA 3S1MC 3S16C 4A3BC 2PMZL 5M5XK 3GTQK 4A93K 1XPPA 3S2HK 3H0GC 2A69A 3PO2C 4A3GC 4A3MK 2VUMK 3HOYK 3S1RK 5IYDC 4A3JC 2Y0SD 3HOXK 5C3EK 2YU9C 2Y0SL 3M4OC 1I6HC 2R93K 2JA5K 2NVXK 4A3CK 4BY1C 4LK0A 1I3QC 4A3DK 3S2HC 4A3FC 3GTPC 2NVTK 3HOUC 3HOWC 1WCMK 4YFXA 2PA8L 4A3EC 3S1QC 4BBRK 1Y1WC 5IP7K 1SFOK 3S14C 4GZYA 3S17K 4X6AK 3RZDK 3S1NK 4LJZA 4MEXA 3GTLC 5FLMK 4BY7K 2A6HA 3K7AC 1TWFK 4Y7NK 2E2HC 1TWCK 4KN7A 4BXXK 3I4NK 2R92K 1Y1VK 5C4JK 4C3HK 5C4XC 5IP9K 4A3LC 4QJVB 3S1MK 4G7ZA 3S16K 4A3BK 4G7OA 3H3VD 4KMUA 3H0GK 3H3VL 3PO2K 4A3GK 1I50C 4MEYA 4YG2A 3CQZC 4OIQA 5IYDK 4A3JK 1R9TC 3HOZC 4NOIA 2YU9K 2CW0A 3M4OK 1I6HK 2PA8D 4BY1K 2A6EA 1IW7A 3GTKC 2O5JA 1I3QK 1ZYRA 2O5IA 2WB1D 1TWHK 3GTOC 1SMYA 2WB1L 4A3FK 3GTPK 1TWAC 4Q4ZA 2E2IC 4A3EK 3HOUK 1Y1WK 3HOWK 3S1QK 3S14K 4OIOA 3I4MC 3HOVC 2JA8C 2E2JC 2NVYC 4BBSC 3GTJC 2B63C 4A3KK 3GTLK 4A3MC 4Q5SA 2BE5A 3K7AK 1YNNA 3S15C 2E2HK 3GTMC 3S2DC 4OIPA 3FKIC
chains in the Genus database with same CATH superfamily
1BDFA 2XCQA 2RH6A 1HI9A 4A3LK 1IBAA 4KARA 1DCPA 4C3IC 1F93A 1VH2A 1WOPA 2JA7C 1ZQ1C 5IYBC 2CFAA 3HKZD 4XSZA 2ZUEA 1R9TK 1XZPA 1I6VA 1J6VA 2GAGC 4WF9S 3VA7A 5C44C 2R92C 3T02A 4A3IC 4LLGA 1K83C 1USOA 1B4BA 4A93C 1WQGA 5HL8A 3FOFA 1F9NA 2B63K 1TWAA 2E2IA 4G0UA 4AYBD 4P9SA 1C0AA 5D4DA 3FKIK 4YFKA 3PO3C 4C3IK 2KWAA 2JA7K 4GTFA 5IYBK 4LK1A 2JA5A 1TWGA 4BY7C 5IOQA 4A3KC 1EH1A 5TJ3A 3GEHA 4C3HC 2WAQL 5M3MK 5C44K 4A3IK 2GSUA 1K83K 4XLPA 4A3BC 4A93K 3H0GC 2A69A 4IO9S 3MMLB 4KMDA 3AD8C 4GTDA 2Y0SL 1I6HC 1J6WA 3T01A 3PO3K 3HOUC 1O29A 2PA8L 3S1QC 1Y1WC 3S14C 2NVXA 3BP8C 2YU9A 1V5VA 1XZQA 4MEXA 1EQRA 4BY7K 2A6HA 4C3HK 2KQ1A 2L3UA 4PAAA 1WSVA 5JVGS 4A3BK 3GSIA 4G7OA 4KASA 4WCES 1XXCA 3H0GK 3AQPA 4G0WA 1F7VA 4GTLA 4LR2A 1I6HK 2PA8D 1IW7A 1TWHK 2O5IA 3HOUK 1TWAC 2E2IC 3S1QK 1Y1WK 3S14K 1XXBA 1I3QA 1ZVUA 2JA8C 3S15C 3GTMC 1WOOA 3G4CA 3N0CA 2V6SA 2ZJQS 4XCHA 1XXAA 2NVQC 1TWGC 4FZBA 4P5BA 1EK8A 3RZOC 3FHZA 3HKZL 2RGRA 2A68A 4QJVA 1USMA 1WORA 4GTEA 2L5NA 1WOSA 5JVOA 3GTGA 3L4KA 1TWAK 2E2IK 3GTQC 4KMHA 2ZUFA 3PIPS 2KXYA 1VLOA 2GAHC 3GTKA 4DDQA 2JA8K 2VUMC 4KMAA 3CF5S 1ISEA 3AQOA 3S15K 1O27A 3GTMK 2NVXC 4AYBL 3S0XA 4KATA 4AH6A 4KAWX 5FJ8K 1F7UA 2NVQK 5IP7C 1TWGK 3OREA 1O25A 1EI6A 4KN4A 4X6AC 3RZDC 4WILA 3RZOK 4QIWD 3S1NC 4IOAS 1FEUA 3Q3QA 4YFNA 4BXXC 3I4NC 4KM8A 5C4JC 3GDZA 2JA6A 1PJ6A 5M3FK 3TFIA 1AB4A 3GTQK 3S16C 4A3MK 2VUMK 5IYDC 3QX3A 3OPFA 1PJ7A 2NVXK 1I3QC 3S2HC 3LPXA 5IP7K 2R93A 3A8KA 2D6FC 4GZYA 1WQHA 4X6AK 3RZDK 1YX2A 3S1NK 1SFOA 3PIOS 4GFQA 4P5AA 4BXXK 3I4NK 1WSRA 2R92K 5C4JK 3LAJA 2CFAB 4GTAA 1IL2A 3S16K 1XZPB 4KMUA 1I50C 4MEYA 5IYDK 3HOZC 3V4GA 2A6EA 3GTKC 1I3QK 3S2HK 2WB1D 3GTOC 1JQWA 4U67S 2ZFZA 1KQ4A 1ZBSA 4BLAA 1IQ0A 5EGHA 3I4MC 3HOVC 2E2JC 4A3KK 2W7VA 1O24A 2BE5A 5E68A 3IPJA 3OEPA 1DD5A 4Y52C 3GTLA 1WIHA 4C3JC 4M1XA 3N3YA 2JA6C 1I50K 5CHPA 3HOZK 2JH3A 1RU0A 4KC6A 3GTKK 3LYWA 3BP3A 3BUEA 3CQZA 4C2MC 3GTOK 3DXJA 3M3YC 1VJEA 3AH5A 4G0VA 1HQMA 3I4MK 3HOVK 4XSXA 2E2JK 3CAGA 5HL7S 2V6TA 3S1RC 3GEIA 3DLLS 1K83A 2R93C 1YNJA 2JA5C 1BS2A 4A3DC 2NVYA 3GTJA 3TFHA 4Y52K 2NVTC 1XZQB 4C3JK 1SFOC 1VRQC 2JA6K 4QIWL 4WJ4A 5FLMC 3WODA 5IOSA 2R7ZA 2ZJRS 5IP9C 4C2MK 3M3YK 4OIRA 2PMZD 3S1MC 2V6UA 1XPPA 4WJ3M 3S1RK 4BKWA 2R93K 2YU9C 2JA5K 4A3DK 4LK0A 4A3FC 1J98A 1G51A 2NVTK 1X31C 4YFXA 4GTBA 1SFOK 3ADAC 1WCMA 1IS1A 1TWHA 4LJZA 3GTLC 5FLMK 4WFNS 4KN7A 3T00A 1B4AA 3L4JA 1O2FB 4KB2A 5C4XC 2ZJPS 5IP9K 1TWFA 1TWCA 4QJVB 3S1MK 1Y1VA 3GIRA 3H3VD 1VGXA 4LQYA 5DM6S 3FOEA 1UV7A 4YG2A 3CQZC 4NOIA 2YU9K 2CW0A 2Y3PA 5DM7S 2O5JA 3ERED 1EFWA 4A3FK 1O26A 1SMYA 2P5MA 2WB1L 4IOCS 2XCOA 2PHCB 3SZZA 4BBSC 2NVYC 3GTPA 3GTJC 5JVHS 3GTLK 3AD9C 2P8TA 4Q5SA 1INNA 3G4AA 3S2DC 4KDDA 5C4XK 2E2HA 2R7ZC 3GTMA 5IYCC 4LOWA 3GTGC 3AD7C 3CQZK 5HQHA 4J3NA 4FM9A 4JK1A 4G7HA 5M5WK 5TMFA 1O2BA 4RMFA 3EQLA 1R9TA 2PPBA 3HOYC 4BBSK 2NVYK 4ZH4A 3LAPA 3GTJK 1IE0A 4KM9A 3HOXC 1BGWA 3NUHA 5C3EC 3SZYA 4MQ9A 3GTQA 2GSOA 4KB4A 4A3CC 3S2DK 2B63A 1BJTA 4GTCA 2VUMA 3JSTA 5IORA 1WCMC 4BBRC 3N0BA 1TWHC 5M5YK 3A8JA 4C45A 3S17C 2R7ZK 5IYCK 3FKIA 4XLNA 3GTGK 4OINA 4Y7NC 1TWFC 4O2DA 2JA7A 1TWCC 2WAQD 1Y1VC 4ILDA 5TMCA 5JFEA 2KPUA 5M5XK 2PMZL 2R92A 4A3GC 3PO2C 3HOYK 5CJ9A 1YCLA 3HXAA 4A3JC 2Y0SD 3HOXK 5C3EK 3M4OC 4GT9A 3TFJA 4A3CK 4BY1C 1PJ5A 1J6XA 3GTPC 3HOWC 1WCMK 1O28A 4BBRK 4A3EC 1L0WA 1DCHA 4PABA 3S17K 2FQTA 3K7AC 5L46A 1TWFK 4Y7NK 2E2HC 1TWCK 1Y1VK 2EBBA 3A8IA 4A3LC 3TTGA 4G7ZA 4BLBA 3H3VL 3PO2K 4A3GK 4OIQA 1ZXOA 4A3JK 1R9TC 5IOTA 1DCOA 3GEEA 3M4OK 3H0GA 4BY1K 1JVIA 1O2AA 1ZYRA 1GE9A 1WQFA 4WFAS 4WFBS 3GTPK 1I50A 3HOWK 4Q4ZA 4A3EK 2GSNA 4OIOA 2B63C 2FQOA 1Y1WA 4A3MC 3GTOA 3K7AK 5EGEA 1YNNA 2E2HK 2XCRB 1JOEA 4OIPA 3FKIC
chains in the Genus database with same CATH topology
4Y52C 1BDFA 5C4XK 4C3JC 2NVQC 1TWGC 4A3LK 4BBSK 4C3IC 2JA7C 2R7ZC 5IYCC 5IYBC 3HKZD 4XSZA 3GTGC 3RZOC 3HKZL 2JA6C 1I50K 3CQZK 2A68A 4QJVA 1R9TK 3HOZK 1I6VA 4JK1A 4G7HA 3GTKK 5M5WK 5TMFA 5C44C 2R92C 4C2MC 3GTOK 3EQLA 4A3IC 3DXJA 4LLGA 1K83C 3M3YC 1TWAK 2E2IK 3GTQC 4A93C 1HQMA 3I4MK 2PPBA 3HOVK 3HOYC 4XSXA 2VUMC 4ZH4A 2NVYK 3GTJK 2E2JK 2B63K 2JA8K 3S1RC 3HOXC 3S15K 5C3EC 2R93C 1YNJA 4MQ9A 4AYBD 3GTMK 2JA5C 2NVXC 4A3CC 4A3DC 4AYBL 3S2DK 5D4DA 3FKIK 4Y52K 4YFKA 3PO3C 2NVTC 5FJ8K 1WCMC 4BBRC 5M5YK 1TWHC 4C3JK 5IP7C 1TWGK 2NVQK 1SFOC 3PO3K 4C3IK 4KN4A 2JA7K 3S17C 4X6AC 5IYCK 2R7ZK 3RZDC 5IYBK 4LK1A 4XLNA 3RZOK 4QIWD 4OINA 3S1NC 2JA6K 4QIWL 3GTGK 5FLMC 4BY7C 3WODA 4Y7NC 1TWFC 4YFNA 4A3KC 1TWCC 4BXXC 3I4NC 2WAQD 1Y1VC 5C4JC 4C3HC 2WAQL 5M3MK 5TMCA 5M3FK 5C44K 5IP9C 4C2MK 4A3IK 3M3YK 1K83K 4OIRA 2PMZD 4XLPA 3S1MC 3S16C 4A3BC 2PMZL 5M5XK 3GTQK 4A93K 1XPPA 3S2HK 3H0GC 2A69A 3PO2C 4A3GC 4A3MK 2VUMK 3HOYK 3S1RK 5IYDC 4A3JC 2Y0SD 3HOXK 5C3EK 2YU9C 2Y0SL 3M4OC 1I6HC 2R93K 2JA5K 2NVXK 4A3CK 4BY1C 4LK0A 1I3QC 4A3DK 3S2HC 4A3FC 3GTPC 2NVTK 3HOUC 3HOWC 1WCMK 4YFXA 2PA8L 4A3EC 3S1QC 4BBRK 1Y1WC 5IP7K 1SFOK 3S14C 4GZYA 3S17K 4X6AK 3RZDK 3S1NK 4LJZA 4MEXA 3GTLC 5FLMK 4BY7K 2A6HA 3K7AC 1TWFK 4Y7NK 2E2HC 1TWCK 4KN7A 4BXXK 3I4NK 2R92K 1Y1VK 5C4JK 4C3HK 5C4XC 5IP9K 4A3LC 4QJVB 3S1MK 4G7ZA 3S16K 4A3BK 4G7OA 3H3VD 4KMUA 3H0GK 3H3VL 3PO2K 4A3GK 1I50C 4MEYA 4YG2A 3CQZC 4OIQA 5IYDK 4A3JK 1R9TC 3HOZC 4NOIA 2YU9K 2CW0A 3M4OK 1I6HK 2PA8D 4BY1K 2A6EA 1IW7A 3GTKC 2O5JA 1I3QK 1ZYRA 2O5IA 2WB1D 1TWHK 3GTOC 1SMYA 2WB1L 4A3FK 3GTPK 1TWAC 4Q4ZA 2E2IC 4A3EK 3HOUK 1Y1WK 3HOWK 3S1QK 3S14K 4OIOA 3I4MC 3HOVC 2JA8C 2E2JC 2NVYC 4BBSC 3GTJC 2B63C 4A3KK 3GTLK 4A3MC 4Q5SA 2BE5A 3K7AK 1YNNA 3S15C 2E2HK 3GTMC 3S2DC 4OIPA 3FKIC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4Y52 C;  1BDF A;  5C4X K;  4C3J C;  2NVQ C;  1TWG C;  4A3L K;  4BBS K;  4C3I C;  2JA7 C;  2R7Z C;  5IYC C;  5IYB C;  3HKZ D;  4XSZ A;  3GTG C;  3RZO C;  3HKZ L;  2JA6 C;  1I50 K;  3CQZ K;  2A68 A;  4QJV A;  1R9T K;  3HOZ K;  1I6V A;  4JK1 A;  4G7H A;  3GTK K;  5M5W K;  5TMF A;  5C44 C;  2R92 C;  4C2M C;  3GTO K;  3EQL A;  4A3I C;  3DXJ A;  4LLG A;  1K83 C;  3M3Y C;  1TWA K;  2E2I K;  3GTQ C;  4A93 C;  1HQM A;  3I4M K;  2PPB A;  3HOV K;  3HOY C;  4XSX A;  2VUM C;  4ZH4 A;  2NVY K;  3GTJ K;  2E2J K;  2B63 K;  2JA8 K;  3S1R C;  3HOX C;  3S15 K;  5C3E C;  2R93 C;  1YNJ A;  4MQ9 A;  4AYB D;  3GTM K;  2JA5 C;  2NVX C;  4A3C C;  4A3D C;  4AYB L;  3S2D K;  5D4D A;  3FKI K;  4Y52 K;  4YFK A;  3PO3 C;  2NVT C;  5FJ8 K;  1WCM C;  4BBR C;  5M5Y K;  1TWH C;  4C3J K;  5IP7 C;  1TWG K;  2NVQ K;  1SFO C;  3PO3 K;  4C3I K;  4KN4 A;  2JA7 K;  3S17 C;  4X6A C;  5IYC K;  2R7Z K;  3RZD C;  5IYB K;  4LK1 A;  4XLN A;  3RZO K;  4QIW D;  4OIN A;  3S1N C;  2JA6 K;  4QIW L;  3GTG K;  5FLM C;  4BY7 C;  3WOD A;  4Y7N C;  1TWF C;  4YFN A;  4A3K C;  1TWC C;  4BXX C;  3I4N C;  2WAQ D;  1Y1V C;  5C4J C;  4C3H C;  2WAQ L;  5M3M K;  5TMC A;  5M3F K;  5C44 K;  5IP9 C;  4C2M K;  4A3I K;  3M3Y K;  1K83 K;  4OIR A;  2PMZ D;  4XLP A;  3S1M C;  3S16 C;  4A3B C;  2PMZ L;  5M5X K;  3GTQ K;  4A93 K;  1XPP A;  3S2H K;  3H0G C;  2A69 A;  3PO2 C;  4A3G C;  4A3M K;  2VUM K;  3HOY K;  3S1R K;  5IYD C;  4A3J C;  2Y0S D;  3HOX K;  5C3E K;  2YU9 C;  2Y0S L;  3M4O C;  1I6H C;  2R93 K;  2JA5 K;  2NVX K;  4A3C K;  4BY1 C;  4LK0 A;  1I3Q C;  4A3D K;  3S2H C;  4A3F C;  3GTP C;  2NVT K;  3HOU C;  3HOW C;  1WCM K;  4YFX A;  2PA8 L;  4A3E C;  3S1Q C;  4BBR K;  1Y1W C;  5IP7 K;  1SFO K;  3S14 C;  4GZY A;  3S17 K;  4X6A K;  3RZD K;  3S1N K;  4LJZ A;  4MEX A;  3GTL C;  5FLM K;  4BY7 K;  2A6H A;  3K7A C;  1TWF K;  4Y7N K;  2E2H C;  1TWC K;  4KN7 A;  4BXX K;  3I4N K;  2R92 K;  1Y1V K;  5C4J K;  4C3H K;  5C4X C;  5IP9 K;  4A3L C;  4QJV B;  3S1M K;  4G7Z A;  3S16 K;  4A3B K;  4G7O A;  3H3V D;  4KMU A;  3H0G K;  3H3V L;  3PO2 K;  4A3G K;  1I50 C;  4MEY A;  4YG2 A;  3CQZ C;  4OIQ A;  5IYD K;  4A3J K;  1R9T C;  3HOZ C;  4NOI A;  2YU9 K;  2CW0 A;  3M4O K;  1I6H K;  2PA8 D;  4BY1 K;  2A6E A;  1IW7 A;  3GTK C;  2O5J A;  1I3Q K;  1ZYR A;  2O5I A;  2WB1 D;  1TWH K;  3GTO C;  1SMY A;  2WB1 L;  4A3F K;  3GTP K;  1TWA C;  4Q4Z A;  2E2I C;  4A3E K;  3HOU K;  1Y1W K;  3HOW K;  3S1Q K;  3S14 K;  4OIO A;  3I4M C;  3HOV C;  2JA8 C;  2E2J C;  2NVY C;  4BBS C;  3GTJ C;  2B63 C;  4A3K K;  3GTL K;  4A3M C;  4Q5S A;  2BE5 A;  3K7A K;  1YNN A;  3S15 C;  2E2H K;  3GTM C;  3S2D C;  4OIP A;  3FKI C; 
#chains in the Genus database with same CATH topology
 1BDF A;  2XCQ A;  2RH6 A;  1HI9 A;  4A3L K;  1IBA A;  4KAR A;  1DCP A;  4C3I C;  1F93 A;  1VH2 A;  1WOP A;  2JA7 C;  1ZQ1 C;  5IYB C;  2CFA A;  3HKZ D;  4XSZ A;  2ZUE A;  1R9T K;  1XZP A;  1I6V A;  1J6V A;  2GAG C;  4WF9 S;  3VA7 A;  5C44 C;  2R92 C;  3T02 A;  4A3I C;  4LLG A;  1K83 C;  1USO A;  1B4B A;  4A93 C;  1WQG A;  5HL8 A;  3FOF A;  1F9N A;  2B63 K;  1TWA A;  2E2I A;  4G0U A;  4AYB D;  4P9S A;  1C0A A;  5D4D A;  3FKI K;  4YFK A;  3PO3 C;  4C3I K;  2KWA A;  2JA7 K;  4GTF A;  5IYB K;  4LK1 A;  2JA5 A;  1TWG A;  4BY7 C;  5IOQ A;  4A3K C;  1EH1 A;  5TJ3 A;  3GEH A;  4C3H C;  2WAQ L;  5M3M K;  5C44 K;  4A3I K;  2GSU A;  1K83 K;  4XLP A;  4A3B C;  4A93 K;  3H0G C;  2A69 A;  4IO9 S;  3MML B;  4KMD A;  3AD8 C;  4GTD A;  2Y0S L;  1I6H C;  1J6W A;  3T01 A;  3PO3 K;  3HOU C;  1O29 A;  2PA8 L;  3S1Q C;  1Y1W C;  3S14 C;  2NVX A;  3BP8 C;  2YU9 A;  1V5V A;  1XZQ A;  4MEX A;  1EQR A;  4BY7 K;  2A6H A;  4C3H K;  2KQ1 A;  2L3U A;  4PAA A;  1WSV A;  5JVG S;  4A3B K;  3GSI A;  4G7O A;  4KAS A;  4WCE S;  1XXC A;  3H0G K;  3AQP A;  4G0W A;  1F7V A;  4GTL A;  4LR2 A;  1I6H K;  2PA8 D;  1IW7 A;  1TWH K;  2O5I A;  3HOU K;  1TWA C;  2E2I C;  3S1Q K;  1Y1W K;  3S14 K;  1XXB A;  1I3Q A;  1ZVU A;  2JA8 C;  3S15 C;  3GTM C;  1WOO A;  3G4C A;  3N0C A;  2V6S A;  2ZJQ S;  4XCH A;  1XXA A;  2NVQ C;  1TWG C;  4FZB A;  4P5B A;  1EK8 A;  3RZO C;  3FHZ A;  3HKZ L;  2RGR A;  2A68 A;  4QJV A;  1USM A;  1WOR A;  4GTE A;  2L5N A;  1WOS A;  5JVO A;  3GTG A;  3L4K A;  1TWA K;  2E2I K;  3GTQ C;  4KMH A;  2ZUF A;  3PIP S;  2KXY A;  1VLO A;  2GAH C;  3GTK A;  4DDQ A;  2JA8 K;  2VUM C;  4KMA A;  3CF5 S;  1ISE A;  3AQO A;  3S15 K;  1O27 A;  3GTM K;  2NVX C;  4AYB L;  3S0X A;  4KAT A;  4AH6 A;  4KAW X;  5FJ8 K;  1F7U A;  2NVQ K;  5IP7 C;  1TWG K;  3ORE A;  1O25 A;  1EI6 A;  4KN4 A;  4X6A C;  3RZD C;  4WIL A;  3RZO K;  4QIW D;  3S1N C;  4IOA S;  1FEU A;  3Q3Q A;  4YFN A;  4BXX C;  3I4N C;  4KM8 A;  5C4J C;  3GDZ A;  2JA6 A;  1PJ6 A;  5M3F K;  3TFI A;  1AB4 A;  3GTQ K;  3S16 C;  4A3M K;  2VUM K;  5IYD C;  3QX3 A;  3OPF A;  1PJ7 A;  2NVX K;  1I3Q C;  3S2H C;  3LPX A;  5IP7 K;  2R93 A;  3A8K A;  2D6F C;  4GZY A;  1WQH A;  4X6A K;  3RZD K;  1YX2 A;  3S1N K;  1SFO A;  3PIO S;  4GFQ A;  4P5A A;  4BXX K;  3I4N K;  1WSR A;  2R92 K;  5C4J K;  3LAJ A;  2CFA B;  4GTA A;  1IL2 A;  3S16 K;  1XZP B;  4KMU A;  1I50 C;  4MEY A;  5IYD K;  3HOZ C;  3V4G A;  2A6E A;  3GTK C;  1I3Q K;  3S2H K;  2WB1 D;  3GTO C;  1JQW A;  4U67 S;  2ZFZ A;  1KQ4 A;  1ZBS A;  4BLA A;  1IQ0 A;  5EGH A;  3I4M C;  3HOV C;  2E2J C;  4A3K K;  2W7V A;  1O24 A;  2BE5 A;  5E68 A;  3IPJ A;  3OEP A;  1DD5 A;  4Y52 C;  3GTL A;  1WIH A;  4C3J C;  4M1X A;  3N3Y A;  2JA6 C;  1I50 K;  5CHP A;  3HOZ K;  2JH3 A;  1RU0 A;  4KC6 A;  3GTK K;  3LYW A;  3BP3 A;  3BUE A;  3CQZ A;  4C2M C;  3GTO K;  3DXJ A;  3M3Y C;  1VJE A;  3AH5 A;  4G0V A;  1HQM A;  3I4M K;  3HOV K;  4XSX A;  2E2J K;  3CAG A;  5HL7 S;  2V6T A;  3S1R C;  3GEI A;  3DLL S;  1K83 A;  2R93 C;  1YNJ A;  2JA5 C;  1BS2 A;  4A3D C;  2NVY A;  3GTJ A;  3TFH A;  4Y52 K;  2NVT C;  1XZQ B;  4C3J K;  1SFO C;  1VRQ C;  2JA6 K;  4QIW L;  4WJ4 A;  5FLM C;  3WOD A;  5IOS A;  2R7Z A;  2ZJR S;  5IP9 C;  4C2M K;  3M3Y K;  4OIR A;  2PMZ D;  3S1M C;  2V6U A;  1XPP A;  4WJ3 M;  3S1R K;  4BKW A;  2R93 K;  2YU9 C;  2JA5 K;  4A3D K;  4LK0 A;  4A3F C;  1J98 A;  1G51 A;  2NVT K;  1X31 C;  4YFX A;  4GTB A;  1SFO K;  3ADA C;  1WCM A;  1IS1 A;  1TWH A;  4LJZ A;  3GTL C;  5FLM K;  4WFN S;  4KN7 A;  3T00 A;  1B4A A;  3L4J A;  1O2F B;  4KB2 A;  5C4X C;  2ZJP S;  5IP9 K;  1TWF A;  1TWC A;  4QJV B;  3S1M K;  1Y1V A;  3GIR A;  3H3V D;  1VGX A;  4LQY A;  5DM6 S;  3FOE A;  1UV7 A;  4YG2 A;  3CQZ C;  4NOI A;  2YU9 K;  2CW0 A;  2Y3P A;  5DM7 S;  2O5J A;  3ERE D;  1EFW A;  4A3F K;  1O26 A;  1SMY A;  2P5M A;  2WB1 L;  4IOC S;  2XCO A;  2PHC B;  3SZZ A;  4BBS C;  2NVY C;  3GTP A;  3GTJ C;  5JVH S;  3GTL K;  3AD9 C;  2P8T A;  4Q5S A;  1INN A;  3G4A A;  3S2D C;  4KDD A;  5C4X K;  2E2H A;  2R7Z C;  3GTM A;  5IYC C;  4LOW A;  3GTG C;  3AD7 C;  3CQZ K;  5HQH A;  4J3N A;  4FM9 A;  4JK1 A;  4G7H A;  5M5W K;  5TMF A;  1O2B A;  4RMF A;  3EQL A;  1R9T A;  2PPB A;  3HOY C;  4BBS K;  2NVY K;  4ZH4 A;  3LAP A;  3GTJ K;  1IE0 A;  4KM9 A;  3HOX C;  1BGW A;  3NUH A;  5C3E C;  3SZY A;  4MQ9 A;  3GTQ A;  2GSO A;  4KB4 A;  4A3C C;  3S2D K;  2B63 A;  1BJT A;  4GTC A;  2VUM A;  3JST A;  5IOR A;  1WCM C;  4BBR C;  3N0B A;  1TWH C;  5M5Y K;  3A8J A;  4C45 A;  3S17 C;  2R7Z K;  5IYC K;  3FKI A;  4XLN A;  3GTG K;  4OIN A;  4Y7N C;  1TWF C;  4O2D A;  2JA7 A;  1TWC C;  2WAQ D;  1Y1V C;  4ILD A;  5TMC A;  5JFE A;  2KPU A;  5M5X K;  2PMZ L;  2R92 A;  4A3G C;  3PO2 C;  3HOY K;  5CJ9 A;  1YCL A;  3HXA A;  4A3J C;  2Y0S D;  3HOX K;  5C3E K;  3M4O C;  4GT9 A;  3TFJ A;  4A3C K;  4BY1 C;  1PJ5 A;  1J6X A;  3GTP C;  3HOW C;  1WCM K;  1O28 A;  4BBR K;  4A3E C;  1L0W A;  1DCH A;  4PAB A;  3S17 K;  2FQT A;  3K7A C;  5L46 A;  1TWF K;  4Y7N K;  2E2H C;  1TWC K;  1Y1V K;  2EBB A;  3A8I A;  4A3L C;  3TTG A;  4G7Z A;  4BLB A;  3H3V L;  3PO2 K;  4A3G K;  4OIQ A;  1ZXO A;  4A3J K;  1R9T C;  5IOT A;  1DCO A;  3GEE A;  3M4O K;  3H0G A;  4BY1 K;  1JVI A;  1O2A A;  1ZYR A;  1GE9 A;  1WQF A;  4WFA S;  4WFB S;  3GTP K;  1I50 A;  3HOW K;  4Q4Z A;  4A3E K;  2GSN A;  4OIO A;  2B63 C;  2FQO A;  1Y1W A;  4A3M C;  3GTO A;  3K7A K;  5EGE A;  1YNN A;  2E2H K;  2XCR B;  1JOE A;  4OIP A;  3FKI C; 
#chains in the Genus database with same CATH homology
 4Y52 C;  1BDF A;  5C4X K;  4C3J C;  2NVQ C;  1TWG C;  4A3L K;  4BBS K;  4C3I C;  2JA7 C;  2R7Z C;  5IYC C;  5IYB C;  3HKZ D;  4XSZ A;  3GTG C;  3RZO C;  3HKZ L;  2JA6 C;  1I50 K;  3CQZ K;  2A68 A;  4QJV A;  1R9T K;  3HOZ K;  1I6V A;  4JK1 A;  4G7H A;  3GTK K;  5M5W K;  5TMF A;  5C44 C;  2R92 C;  4C2M C;  3GTO K;  3EQL A;  4A3I C;  3DXJ A;  4LLG A;  1K83 C;  3M3Y C;  1TWA K;  2E2I K;  3GTQ C;  4A93 C;  1HQM A;  3I4M K;  2PPB A;  3HOV K;  3HOY C;  4XSX A;  2VUM C;  4ZH4 A;  2NVY K;  3GTJ K;  2E2J K;  2B63 K;  2JA8 K;  3S1R C;  3HOX C;  3S15 K;  5C3E C;  2R93 C;  1YNJ A;  4MQ9 A;  4AYB D;  3GTM K;  2JA5 C;  2NVX C;  4A3C C;  4A3D C;  4AYB L;  3S2D K;  5D4D A;  3FKI K;  4Y52 K;  4YFK A;  3PO3 C;  2NVT C;  5FJ8 K;  1WCM C;  4BBR C;  5M5Y K;  1TWH C;  4C3J K;  5IP7 C;  1TWG K;  2NVQ K;  1SFO C;  3PO3 K;  4C3I K;  4KN4 A;  2JA7 K;  3S17 C;  4X6A C;  5IYC K;  2R7Z K;  3RZD C;  5IYB K;  4LK1 A;  4XLN A;  3RZO K;  4QIW D;  4OIN A;  3S1N C;  2JA6 K;  4QIW L;  3GTG K;  5FLM C;  4BY7 C;  3WOD A;  4Y7N C;  1TWF C;  4YFN A;  4A3K C;  1TWC C;  4BXX C;  3I4N C;  2WAQ D;  1Y1V C;  5C4J C;  4C3H C;  2WAQ L;  5M3M K;  5TMC A;  5M3F K;  5C44 K;  5IP9 C;  4C2M K;  4A3I K;  3M3Y K;  1K83 K;  4OIR A;  2PMZ D;  4XLP A;  3S1M C;  3S16 C;  4A3B C;  2PMZ L;  5M5X K;  3GTQ K;  4A93 K;  1XPP A;  3S2H K;  3H0G C;  2A69 A;  3PO2 C;  4A3G C;  4A3M K;  2VUM K;  3HOY K;  3S1R K;  5IYD C;  4A3J C;  2Y0S D;  3HOX K;  5C3E K;  2YU9 C;  2Y0S L;  3M4O C;  1I6H C;  2R93 K;  2JA5 K;  2NVX K;  4A3C K;  4BY1 C;  4LK0 A;  1I3Q C;  4A3D K;  3S2H C;  4A3F C;  3GTP C;  2NVT K;  3HOU C;  3HOW C;  1WCM K;  4YFX A;  2PA8 L;  4A3E C;  3S1Q C;  4BBR K;  1Y1W C;  5IP7 K;  1SFO K;  3S14 C;  4GZY A;  3S17 K;  4X6A K;  3RZD K;  3S1N K;  4LJZ A;  4MEX A;  3GTL C;  5FLM K;  4BY7 K;  2A6H A;  3K7A C;  1TWF K;  4Y7N K;  2E2H C;  1TWC K;  4KN7 A;  4BXX K;  3I4N K;  2R92 K;  1Y1V K;  5C4J K;  4C3H K;  5C4X C;  5IP9 K;  4A3L C;  4QJV B;  3S1M K;  4G7Z A;  3S16 K;  4A3B K;  4G7O A;  3H3V D;  4KMU A;  3H0G K;  3H3V L;  3PO2 K;  4A3G K;  1I50 C;  4MEY A;  4YG2 A;  3CQZ C;  4OIQ A;  5IYD K;  4A3J K;  1R9T C;  3HOZ C;  4NOI A;  2YU9 K;  2CW0 A;  3M4O K;  1I6H K;  2PA8 D;  4BY1 K;  2A6E A;  1IW7 A;  3GTK C;  2O5J A;  1I3Q K;  1ZYR A;  2O5I A;  2WB1 D;  1TWH K;  3GTO C;  1SMY A;  2WB1 L;  4A3F K;  3GTP K;  1TWA C;  4Q4Z A;  2E2I C;  4A3E K;  3HOU K;  1Y1W K;  3HOW K;  3S1Q K;  3S14 K;  4OIO A;  3I4M C;  3HOV C;  2JA8 C;  2E2J C;  2NVY C;  4BBS C;  3GTJ C;  2B63 C;  4A3K K;  3GTL K;  4A3M C;  4Q5S A;  2BE5 A;  3K7A K;  1YNN A;  3S15 C;  2E2H K;  3GTM C;  3S2D C;  4OIP A;  3FKI C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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