4A3LC

Rna polymerase ii initial transcribing complex with a 7nt dna-rna hybrid and soaked with ampcpp
Total Genus 61
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
61
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1
publication title Structural basis of initial RNA polymerase II transcription.
pubmed doi rcsb
molecule tags Transcription
total genus 61
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-09-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 4a3lC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 4a3lC01
1TWFK 2CW0A 2JA8C 4BBSK 3H0GK 4C3IK 3HKZD 3M3YC 4A3IK 3I4NC 3M4OC 1TWAC 3HOYK 3RZOK 5C4JC 1I50K 3WODA 4XSZA 2WAQL 1TWCK 4A93C 4C2MC 2JA6K 2JA7K 4QJVB 2R7ZC 1BDFA 4A3LC 3H0GC 2NVTK 4C3IC 3PO3K 3S2DK 2PA8D 1SFOC 2B63C 5IYDK 4OIRA 3HOYC 3HOWK 1I50C 3S1RK 1TWCC 3K7AK 4A3EK 2Y0SL 2JA7C 4A3BK 1TWGK 2E2IK 3S1NC 4OIPA 2A68A 4KN4A 1K83C 3HOXC 3S2DC 3HKZL 4MEXA 1Y1WK 3HOVC 5IYDC 4Q5SA 3CQZK 5C4XK 4X6AC 1ZYRA 4A3EC 1I6HC 5IYCC 3GTQC 2WB1L 4YFKA 3I4MK 4Y7NC 3GTOC 4XLPA 4MEYA 2NVYK 3HOZC 3S14C 4JK1A 5IYBK 2A6HA 3PO3C 5D4DA 3CQZC 1XPPA 2E2HC 4BY7C 3FKIK 3GTJK 1TWFC 4BY1K 4AYBL 2NVQK 4OIQA 4BBSC 4G7OA 5M3MK 4A3JK 2JA5K 4Y52K 1I3QK 4C3JK 4A3IC 5M5YK 2BE5A 4BBRK 3I4MC 3RZOC 5IYBC 4LK0A 2PMZD 4GZYA 4C3HK 3H3VD 3GTJC 2JA6C 3GTLK 5IP9K 2NVXK 2R93K 1TWHK 1SMYA 3S17K 4A3GK 4BXXK 1HQMA 2O5JA 4A3JC 2JA5C 2A6EA 2NVTC 1WCMK 3RZDK 4C3JC 3EQLA 2E2JK 1YNNA 3S1MK 3S1QK 3HOWC 5M5XK 3S1RC 5C44K 3K7AC 3HOUK 3S16K 4A3BC 4A3MK 1TWGC 2YU9K 2NVXC 2R93C 5IP7K 2E2IC 3S17C 4A3GC 2VUMK 1WCMC 1Y1WC 3GTPK 2PA8L 3S15K 4A3DK 3S1QC 1IW7A 4NOIA 4ZH4A 5C4XC 4A3KK 2PMZL 2PPBA 3HOUC 4QIWD 4YFXA 2JA8K 4OIOA 5FLMK 3M3YK 3GTPC 4YFNA 3GTKK 3M4OK 2NVYC 5C4JK 4A3DC 1YNJA 2A69A 3S2HK 4A3KC 3FKIC 4BY1C 2NVQC 3GTGK 1Y1VK 4C2MK 4A93K 4Q4ZA 4Y52C 2R7ZK 1I3QC 4A3LK 5M3FK 5FLMC 2R92K 5TMCA 1SFOK 4BBRC 3GTMK 3GTKC 4KN7A 3DXJA 2B63K 4A3FK 5TMFA 4C3HC 3S2HC 3GTLC 4LK1A 5IP9C 4XLNA 3GTGC 1TWHC 1Y1VC 4QJVA 2O5IA 4BXXC 4G7HA 4QIWL 2WB1D 1R9TK 4A3CK 3RZDC 2E2JC 3S1NK 3S1MC 1K83K 2R92C 3HOXK 3HOVK 3GTMC 2WAQD 5FJ8K 5C3EK 4KMUA 4A3FC 4MQ9A 3PO2K 4XSXA 5C44C 4X6AK 3S16C 3H3VL 4AYBD 4YG2A 4LLGA 4A3MC 2YU9C 1I6HK 5IP7C 5IYCK 2VUMC 4G7ZA 4A3CC 1R9TC 3GTQK 3I4NK 1I6VA 1TWAK 4LJZA 3S15C 4Y7NK 3GTOK 5M5WK 3HOZK 3S14K 5C3EC 4OINA 2Y0SD 3PO2C 2E2HK 4BY7K
chains in the Genus database with same CATH superfamily
3T01A 3M3YC 1IE0A 3I4NC 4WCES 2XCRB 3LPXA 2XCQA 4RMFA 3A8IA 1SFOC 2B63C 1EQRA 1TWGK 2E2IK 1O28A 4GFQA 4KN4A 1EK8A 1Y1WK 1BS2A 4MEXA 1WIHA 4WILA 4KMDA 2EBBA 2YU9A 1I6HC 1J98A 1PJ7A 5IYCC 4KMHA 3I4MK 1ZXOA 2NVYK 1PJ5A 1TWFC 4Y52K 3N0CA 1KQ4A 4P5BA 4A3IC 1JVIA 4BBRK 3I4MC 3RZOC 3AQOA 2PHCB 2CFAB 3GTGA 3H3VD 2JA6C 2D6FC 1O2FB 2R93K 3L4KA 2NVTC 1YNNA 2V6UA 3HOWC 4P5AA 2GSOA 5C44K 3K7AC 3HOUK 4WJ3M 3S16K 4A3BC 3AH5A 1VJEA 3JSTA 2JA7A 2R93C 2FQTA 2RH6A 2VUMK 3GTPK 3A8KA 4DDQA 1IW7A 4KARA 5IOQA 2PMZL 1J6WA 4GTEA 3HOUC 1ZQ1C 4QIWD 4YFXA 4WFBS 2GAGC 3Q3QA 4OIOA 5CJ9A 3GTQA 3GEHA 4GTDA 3GTPC 1TWAA 3GTKK 3M4OK 1O2AA 3V4GA 3CQZA 2NVQC 3FKIC 1XZPA 3G4AA 4KATA 1WOSA 3OREA 4LQYA 5M3FK 2ZJPS 2R92K 3L4JA 3GTKC 1I50A 4KN7A 5DM7S 4LOWA 3GTLC 1G51A 1R9TK 2KXYA 2GAHC 3S1NK 3GEEA 3S1MC 1K83K 2R92C 4GTCA 2JH3A 2WAQD 5HQHA 1R9TC 4Y7NK 5M5WK 1DD5A 3BP8C 3S14K 4OINA 2Y0SD 2E2HK 1IBAA 4BBSK 4C3IK 3HKZD 3SZYA 3MMLB 3LAJA 1V5VA 3WODA 3PIPS 3GTJA 2L5NA 4KMAA 4C2MC 1EI6A 4KDDA 2R7ZC 1I3QA 4A3LC 4C3IC 3S2DK 1UV7A 4KM9A 2CFAA 1FEUA 3BP3A 4A3EK 2NVXA 1J6XA 1TWHA 4KB4A 5IOSA 1WCMA 1AB4A 1WQGA 4OIPA 2A68A 3LYWA 3HOXC 3AD8C 3S2DC 1F93A 3HOVC 4G0UA 5C4XK 3GEIA 4FZBA 4A3EC 4GTBA 2W7VA 3BUEA 1DCOA 3GTOC 4XLPA 4MEYA 3TTGA 4LR2A 4BY1K 4BY7C 1JQWA 4AYBL 5JVGS 4G7OA 2JA5K 1JOEA 4XCHA 4ILDA 2BE5A 1WOPA 4GTFA 1F7VA 4LK0A 3PO2C 4C3HK 1Y1VA 5IP9K 4BXXK 2JA5C 2A6EA 3RZDK 1SFOA 3GTMA 4KASA 2B63A 3AD7C 2YU9K 1TWGC 3CAGA 5IP7K 2E2IC 5L46A 4G0WA 1Y1WC 3S15K 4NOIA 2PPBA 2JA8K 1IL2A 2NVYC 5C4JK 3AD9C 3GTGK 1TWFA 4Q4ZA 4Y52C 4IOAS 1ZBSA 5TMCA 4BBRC 3DXJA 4A3FK 1TWCA 2JA6A 3GTGC 4G7HA 1WOOA 4GTAA 5TJ3A 3OEPA 1VLOA 1O25A 1IS1A 2ZJQS 4A3FC 4MQ9A 5EGEA 4XSXA 5C44C 4X6AK 3S16C 3A8JA 4AYBD 4LLGA 1DCHA 2VUMC 4G7ZA 1BGWA 1EFWA 3GTQK 1EH1A 1TWAK 2KWAA 1INNA 3S0XA 3TFIA 4WFAS 3HOZK 4A93K 1VGXA 3PO3K 5JFEA 2CW0A 3H0GK 1HI9A 3N3YA 4P9SA 3N0BA 1O26A 3GTPA 3M4OC 1VH2A 1TWAC 1I50K 4BKWA 3PIOS 4XSZA 1WSRA 3FKIA 4A93C 4QJVB 1BDFA 3H0GC 4G0VA 2Y3PA 2KPUA 3GTKA 5IYDK 1I50C 2RGRA 3QX3A 3GSIA 3S1RK 3GTLA 3FHZA 3S1NC 1K83C 2R92A 4U67S 5IYDC 4Q5SA 3VA7A 1ZYRA 3IPJA 4IOCS 2WB1L 4Y7NC 1F7UA 3S14C 3GTJK 2E2HC 2V6SA 2KQ1A 1WQFA 4BBSC 5M3MK 1I3QK 4C3JK 1XZQB 4KC6A 5DM6S 2PMZD 5IORA 3GTJC 2XCOA 2NVXK 1TWHK 2R7ZA 5E68A 3S17K 1HQMA 2O5JA 1WCMK 2E2JK 4C3JC 3EQLA 2ZUFA 3S1QK 5JVOA 3T00A 4A3MK 2NVXC 3S17C 1WCMC 2PA8L 4A3DK 1X31C 3S1QC 4ZH4A 4M1XA 5C4XC 4A3KK 1IQ0A 1O24A 5FLMK 3M3YK 4YFNA 3GTOA 3NUHA 3T02A 4A3DC 1YNJA 2A69A 4A3KC 4BY1C 1J6VA 1O27A 3TFHA 1Y1VK 3GDZA 4PABA 1WQHA 2GSUA 5FLMC 1SFOK 3GTMK 4WF9S 1YCLA 5IOTA 3TFJA 2B63K 4C3HC 3ERED 5IP9C 1Y1VC 4QJVA 2O5IA 4BXXC 2JA5A 4QIWL 2WB1D 3RZDC 4GT9A 1L0WA 3GTMC 4KB2A 4KMUA 4O2DA 2YU9C 1TWGA 2ZUEA 1I6HK 5IP7C 2E2IA 5IYCK 1Y1WA 1I6VA 3S15C 1B4BA 1YX2A 1O2BA 5HL8A 1TWFK 2JA8C 1XXAA 4A3IK 2FQOA 2NVYA 3HOYK 3RZOK 5C4JC 5JVHS 2WAQL 1DCPA 1TWCK 2JA7K 2JA6K 3OPFA 1XXBA 4C45A 2NVTK 2PA8D 1XZQA 4GTLA 4OIRA 3HOYC 3HOWK 1WSVA 1TWCC 3K7AK 2R93A 2Y0SL 2JA7C 4AH6A 4A3BK 3LAPA 1ISEA 3HKZL 3FOFA 4WJ4A 5HL7S 3CQZK 4X6AC 2VUMA 3GTQC 1PJ6A 4YFKA 2V6TA 4J3NA 5IYBK 3HOZC 4JK1A 1O29A 2A6HA 3PO3C 5D4DA 3CQZC 1XPPA 3FKIK 2NVQK 1GE9A 4OIQA 1C0AA 1USOA 4A3JK 3GIRA 5M5YK 1XXCA 5IYBC 4GZYA 5CHPA 3GTLK 4BLBA 1SMYA 2ZFZA 4KAWX 3H0GA 4A3GK 4A3JC 1USMA 3S1MK 1ZVUA 4WFNS 5M5XK 3S1RC 1R9TA 3CF5S 4A3GC 1K83A 3DLLS 5EGHA 1VRQC 4IO9S 4FM9A 3G4CA 3SZZA 4BLAA 1F9NA 3S2HK 4KM8A 2E2HA 4C2MK 2L3UA 3HXAA 4PAAA 2R7ZK 1I3QC 4A3LK 3AQPA 5TMFA 3S2HC 4LK1A 4XLNA 1TWHC 1B4AA 2P5MA 4A3CK 2E2JC 3HOXK 1BJTA 3HOVK 5FJ8K 5C3EK 3PO2K 3H3VL 4A3MC 4YG2A 2GSNA 3ADAC 2P8TA 4A3CC 3I4NK 4LJZA 1RU0A 3GTOK 3FOEA 2ZJRS 5C3EC 1XZPB 1WORA 4BY7K
chains in the Genus database with same CATH topology
1TWFK 2CW0A 2JA8C 4BBSK 3H0GK 4C3IK 3HKZD 3M3YC 4A3IK 3I4NC 3M4OC 1TWAC 3HOYK 3RZOK 5C4JC 1I50K 3WODA 4XSZA 2WAQL 1TWCK 4A93C 4C2MC 2JA6K 2JA7K 4QJVB 2R7ZC 1BDFA 4A3LC 3H0GC 2NVTK 4C3IC 3PO3K 3S2DK 2PA8D 1SFOC 2B63C 5IYDK 4OIRA 3HOYC 3HOWK 1I50C 3S1RK 1TWCC 3K7AK 4A3EK 2Y0SL 2JA7C 4A3BK 1TWGK 2E2IK 3S1NC 4OIPA 2A68A 4KN4A 1K83C 3HOXC 3S2DC 3HKZL 4MEXA 1Y1WK 3HOVC 5IYDC 4Q5SA 3CQZK 5C4XK 4X6AC 1ZYRA 4A3EC 1I6HC 5IYCC 3GTQC 2WB1L 4YFKA 3I4MK 4Y7NC 3GTOC 4XLPA 4MEYA 2NVYK 3HOZC 3S14C 4JK1A 5IYBK 2A6HA 3PO3C 5D4DA 3CQZC 1XPPA 2E2HC 4BY7C 3FKIK 3GTJK 1TWFC 4BY1K 4AYBL 2NVQK 4OIQA 4BBSC 4G7OA 5M3MK 4A3JK 2JA5K 4Y52K 1I3QK 4C3JK 4A3IC 5M5YK 2BE5A 4BBRK 3I4MC 3RZOC 5IYBC 4LK0A 2PMZD 4GZYA 4C3HK 3H3VD 3GTJC 2JA6C 3GTLK 5IP9K 2NVXK 2R93K 1TWHK 1SMYA 3S17K 4A3GK 4BXXK 1HQMA 2O5JA 4A3JC 2JA5C 2A6EA 2NVTC 1WCMK 3RZDK 4C3JC 3EQLA 2E2JK 1YNNA 3S1MK 3S1QK 3HOWC 5M5XK 3S1RC 5C44K 3K7AC 3HOUK 3S16K 4A3BC 4A3MK 1TWGC 2YU9K 2NVXC 2R93C 5IP7K 2E2IC 3S17C 4A3GC 2VUMK 1WCMC 1Y1WC 3GTPK 2PA8L 3S15K 4A3DK 3S1QC 1IW7A 4NOIA 4ZH4A 5C4XC 4A3KK 2PMZL 2PPBA 3HOUC 4QIWD 4YFXA 2JA8K 4OIOA 5FLMK 3M3YK 3GTPC 4YFNA 3GTKK 3M4OK 2NVYC 5C4JK 4A3DC 1YNJA 2A69A 3S2HK 4A3KC 3FKIC 4BY1C 2NVQC 3GTGK 1Y1VK 4C2MK 4A93K 4Q4ZA 4Y52C 2R7ZK 1I3QC 4A3LK 5M3FK 5FLMC 2R92K 5TMCA 1SFOK 4BBRC 3GTMK 3GTKC 4KN7A 3DXJA 2B63K 4A3FK 5TMFA 4C3HC 3S2HC 3GTLC 4LK1A 5IP9C 4XLNA 3GTGC 1TWHC 1Y1VC 4QJVA 2O5IA 4BXXC 4G7HA 4QIWL 2WB1D 1R9TK 4A3CK 3RZDC 2E2JC 3S1NK 3S1MC 1K83K 2R92C 3HOXK 3HOVK 3GTMC 2WAQD 5FJ8K 5C3EK 4KMUA 4A3FC 4MQ9A 3PO2K 4XSXA 5C44C 4X6AK 3S16C 3H3VL 4AYBD 4YG2A 4LLGA 4A3MC 2YU9C 1I6HK 5IP7C 5IYCK 2VUMC 4G7ZA 4A3CC 1R9TC 3GTQK 3I4NK 1I6VA 1TWAK 4LJZA 3S15C 4Y7NK 3GTOK 5M5WK 3HOZK 3S14K 5C3EC 4OINA 2Y0SD 3PO2C 2E2HK 4BY7K
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1TWF K;  2CW0 A;  2JA8 C;  4BBS K;  3H0G K;  4C3I K;  3HKZ D;  3M3Y C;  4A3I K;  3I4N C;  3M4O C;  1TWA C;  3HOY K;  3RZO K;  5C4J C;  1I50 K;  3WOD A;  4XSZ A;  2WAQ L;  1TWC K;  4A93 C;  4C2M C;  2JA6 K;  2JA7 K;  4QJV B;  2R7Z C;  1BDF A;  4A3L C;  3H0G C;  2NVT K;  4C3I C;  3PO3 K;  3S2D K;  2PA8 D;  1SFO C;  2B63 C;  5IYD K;  4OIR A;  3HOY C;  3HOW K;  1I50 C;  3S1R K;  1TWC C;  3K7A K;  4A3E K;  2Y0S L;  2JA7 C;  4A3B K;  1TWG K;  2E2I K;  3S1N C;  4OIP A;  2A68 A;  4KN4 A;  1K83 C;  3HOX C;  3S2D C;  3HKZ L;  4MEX A;  1Y1W K;  3HOV C;  5IYD C;  4Q5S A;  3CQZ K;  5C4X K;  4X6A C;  1ZYR A;  4A3E C;  1I6H C;  5IYC C;  3GTQ C;  2WB1 L;  4YFK A;  3I4M K;  4Y7N C;  3GTO C;  4XLP A;  4MEY A;  2NVY K;  3HOZ C;  3S14 C;  4JK1 A;  5IYB K;  2A6H A;  3PO3 C;  5D4D A;  3CQZ C;  1XPP A;  2E2H C;  4BY7 C;  3FKI K;  3GTJ K;  1TWF C;  4BY1 K;  4AYB L;  2NVQ K;  4OIQ A;  4BBS C;  4G7O A;  5M3M K;  4A3J K;  2JA5 K;  4Y52 K;  1I3Q K;  4C3J K;  4A3I C;  5M5Y K;  2BE5 A;  4BBR K;  3I4M C;  3RZO C;  5IYB C;  4LK0 A;  2PMZ D;  4GZY A;  4C3H K;  3H3V D;  3GTJ C;  2JA6 C;  3GTL K;  5IP9 K;  2NVX K;  2R93 K;  1TWH K;  1SMY A;  3S17 K;  4A3G K;  4BXX K;  1HQM A;  2O5J A;  4A3J C;  2JA5 C;  2A6E A;  2NVT C;  1WCM K;  3RZD K;  4C3J C;  3EQL A;  2E2J K;  1YNN A;  3S1M K;  3S1Q K;  3HOW C;  5M5X K;  3S1R C;  5C44 K;  3K7A C;  3HOU K;  3S16 K;  4A3B C;  4A3M K;  1TWG C;  2YU9 K;  2NVX C;  2R93 C;  5IP7 K;  2E2I C;  3S17 C;  4A3G C;  2VUM K;  1WCM C;  1Y1W C;  3GTP K;  2PA8 L;  3S15 K;  4A3D K;  3S1Q C;  1IW7 A;  4NOI A;  4ZH4 A;  5C4X C;  4A3K K;  2PMZ L;  2PPB A;  3HOU C;  4QIW D;  4YFX A;  2JA8 K;  4OIO A;  5FLM K;  3M3Y K;  3GTP C;  4YFN A;  3GTK K;  3M4O K;  2NVY C;  5C4J K;  4A3D C;  1YNJ A;  2A69 A;  3S2H K;  4A3K C;  3FKI C;  4BY1 C;  2NVQ C;  3GTG K;  1Y1V K;  4C2M K;  4A93 K;  4Q4Z A;  4Y52 C;  2R7Z K;  1I3Q C;  4A3L K;  5M3F K;  5FLM C;  2R92 K;  5TMC A;  1SFO K;  4BBR C;  3GTM K;  3GTK C;  4KN7 A;  3DXJ A;  2B63 K;  4A3F K;  5TMF A;  4C3H C;  3S2H C;  3GTL C;  4LK1 A;  5IP9 C;  4XLN A;  3GTG C;  1TWH C;  1Y1V C;  4QJV A;  2O5I A;  4BXX C;  4G7H A;  4QIW L;  2WB1 D;  1R9T K;  4A3C K;  3RZD C;  2E2J C;  3S1N K;  3S1M C;  1K83 K;  2R92 C;  3HOX K;  3HOV K;  3GTM C;  2WAQ D;  5FJ8 K;  5C3E K;  4KMU A;  4A3F C;  4MQ9 A;  3PO2 K;  4XSX A;  5C44 C;  4X6A K;  3S16 C;  3H3V L;  4AYB D;  4YG2 A;  4LLG A;  4A3M C;  2YU9 C;  1I6H K;  5IP7 C;  5IYC K;  2VUM C;  4G7Z A;  4A3C C;  1R9T C;  3GTQ K;  3I4N K;  1I6V A;  1TWA K;  4LJZ A;  3S15 C;  4Y7N K;  3GTO K;  5M5W K;  3HOZ K;  3S14 K;  5C3E C;  4OIN A;  2Y0S D;  3PO2 C;  2E2H K;  4BY7 K; 
#chains in the Genus database with same CATH topology
 3T01 A;  3M3Y C;  1IE0 A;  3I4N C;  4WCE S;  2XCR B;  3LPX A;  2XCQ A;  4RMF A;  3A8I A;  1SFO C;  2B63 C;  1EQR A;  1TWG K;  2E2I K;  1O28 A;  4GFQ A;  4KN4 A;  1EK8 A;  1Y1W K;  1BS2 A;  4MEX A;  1WIH A;  4WIL A;  4KMD A;  2EBB A;  2YU9 A;  1I6H C;  1J98 A;  1PJ7 A;  5IYC C;  4KMH A;  3I4M K;  1ZXO A;  2NVY K;  1PJ5 A;  1TWF C;  4Y52 K;  3N0C A;  1KQ4 A;  4P5B A;  4A3I C;  1JVI A;  4BBR K;  3I4M C;  3RZO C;  3AQO A;  2PHC B;  2CFA B;  3GTG A;  3H3V D;  2JA6 C;  2D6F C;  1O2F B;  2R93 K;  3L4K A;  2NVT C;  1YNN A;  2V6U A;  3HOW C;  4P5A A;  2GSO A;  5C44 K;  3K7A C;  3HOU K;  4WJ3 M;  3S16 K;  4A3B C;  3AH5 A;  1VJE A;  3JST A;  2JA7 A;  2R93 C;  2FQT A;  2RH6 A;  2VUM K;  3GTP K;  3A8K A;  4DDQ A;  1IW7 A;  4KAR A;  5IOQ A;  2PMZ L;  1J6W A;  4GTE A;  3HOU C;  1ZQ1 C;  4QIW D;  4YFX A;  4WFB S;  2GAG C;  3Q3Q A;  4OIO A;  5CJ9 A;  3GTQ A;  3GEH A;  4GTD A;  3GTP C;  1TWA A;  3GTK K;  3M4O K;  1O2A A;  3V4G A;  3CQZ A;  2NVQ C;  3FKI C;  1XZP A;  3G4A A;  4KAT A;  1WOS A;  3ORE A;  4LQY A;  5M3F K;  2ZJP S;  2R92 K;  3L4J A;  3GTK C;  1I50 A;  4KN7 A;  5DM7 S;  4LOW A;  3GTL C;  1G51 A;  1R9T K;  2KXY A;  2GAH C;  3S1N K;  3GEE A;  3S1M C;  1K83 K;  2R92 C;  4GTC A;  2JH3 A;  2WAQ D;  5HQH A;  1R9T C;  4Y7N K;  5M5W K;  1DD5 A;  3BP8 C;  3S14 K;  4OIN A;  2Y0S D;  2E2H K;  1IBA A;  4BBS K;  4C3I K;  3HKZ D;  3SZY A;  3MML B;  3LAJ A;  1V5V A;  3WOD A;  3PIP S;  3GTJ A;  2L5N A;  4KMA A;  4C2M C;  1EI6 A;  4KDD A;  2R7Z C;  1I3Q A;  4A3L C;  4C3I C;  3S2D K;  1UV7 A;  4KM9 A;  2CFA A;  1FEU A;  3BP3 A;  4A3E K;  2NVX A;  1J6X A;  1TWH A;  4KB4 A;  5IOS A;  1WCM A;  1AB4 A;  1WQG A;  4OIP A;  2A68 A;  3LYW A;  3HOX C;  3AD8 C;  3S2D C;  1F93 A;  3HOV C;  4G0U A;  5C4X K;  3GEI A;  4FZB A;  4A3E C;  4GTB A;  2W7V A;  3BUE A;  1DCO A;  3GTO C;  4XLP A;  4MEY A;  3TTG A;  4LR2 A;  4BY1 K;  4BY7 C;  1JQW A;  4AYB L;  5JVG S;  4G7O A;  2JA5 K;  1JOE A;  4XCH A;  4ILD A;  2BE5 A;  1WOP A;  4GTF A;  1F7V A;  4LK0 A;  3PO2 C;  4C3H K;  1Y1V A;  5IP9 K;  4BXX K;  2JA5 C;  2A6E A;  3RZD K;  1SFO A;  3GTM A;  4KAS A;  2B63 A;  3AD7 C;  2YU9 K;  1TWG C;  3CAG A;  5IP7 K;  2E2I C;  5L46 A;  4G0W A;  1Y1W C;  3S15 K;  4NOI A;  2PPB A;  2JA8 K;  1IL2 A;  2NVY C;  5C4J K;  3AD9 C;  3GTG K;  1TWF A;  4Q4Z A;  4Y52 C;  4IOA S;  1ZBS A;  5TMC A;  4BBR C;  3DXJ A;  4A3F K;  1TWC A;  2JA6 A;  3GTG C;  4G7H A;  1WOO A;  4GTA A;  5TJ3 A;  3OEP A;  1VLO A;  1O25 A;  1IS1 A;  2ZJQ S;  4A3F C;  4MQ9 A;  5EGE A;  4XSX A;  5C44 C;  4X6A K;  3S16 C;  3A8J A;  4AYB D;  4LLG A;  1DCH A;  2VUM C;  4G7Z A;  1BGW A;  1EFW A;  3GTQ K;  1EH1 A;  1TWA K;  2KWA A;  1INN A;  3S0X A;  3TFI A;  4WFA S;  3HOZ K;  4A93 K;  1VGX A;  3PO3 K;  5JFE A;  2CW0 A;  3H0G K;  1HI9 A;  3N3Y A;  4P9S A;  3N0B A;  1O26 A;  3GTP A;  3M4O C;  1VH2 A;  1TWA C;  1I50 K;  4BKW A;  3PIO S;  4XSZ A;  1WSR A;  3FKI A;  4A93 C;  4QJV B;  1BDF A;  3H0G C;  4G0V A;  2Y3P A;  2KPU A;  3GTK A;  5IYD K;  1I50 C;  2RGR A;  3QX3 A;  3GSI A;  3S1R K;  3GTL A;  3FHZ A;  3S1N C;  1K83 C;  2R92 A;  4U67 S;  5IYD C;  4Q5S A;  3VA7 A;  1ZYR A;  3IPJ A;  4IOC S;  2WB1 L;  4Y7N C;  1F7U A;  3S14 C;  3GTJ K;  2E2H C;  2V6S A;  2KQ1 A;  1WQF A;  4BBS C;  5M3M K;  1I3Q K;  4C3J K;  1XZQ B;  4KC6 A;  5DM6 S;  2PMZ D;  5IOR A;  3GTJ C;  2XCO A;  2NVX K;  1TWH K;  2R7Z A;  5E68 A;  3S17 K;  1HQM A;  2O5J A;  1WCM K;  2E2J K;  4C3J C;  3EQL A;  2ZUF A;  3S1Q K;  5JVO A;  3T00 A;  4A3M K;  2NVX C;  3S17 C;  1WCM C;  2PA8 L;  4A3D K;  1X31 C;  3S1Q C;  4ZH4 A;  4M1X A;  5C4X C;  4A3K K;  1IQ0 A;  1O24 A;  5FLM K;  3M3Y K;  4YFN A;  3GTO A;  3NUH A;  3T02 A;  4A3D C;  1YNJ A;  2A69 A;  4A3K C;  4BY1 C;  1J6V A;  1O27 A;  3TFH A;  1Y1V K;  3GDZ A;  4PAB A;  1WQH A;  2GSU A;  5FLM C;  1SFO K;  3GTM K;  4WF9 S;  1YCL A;  5IOT A;  3TFJ A;  2B63 K;  4C3H C;  3ERE D;  5IP9 C;  1Y1V C;  4QJV A;  2O5I A;  4BXX C;  2JA5 A;  4QIW L;  2WB1 D;  3RZD C;  4GT9 A;  1L0W A;  3GTM C;  4KB2 A;  4KMU A;  4O2D A;  2YU9 C;  1TWG A;  2ZUE A;  1I6H K;  5IP7 C;  2E2I A;  5IYC K;  1Y1W A;  1I6V A;  3S15 C;  1B4B A;  1YX2 A;  1O2B A;  5HL8 A;  1TWF K;  2JA8 C;  1XXA A;  4A3I K;  2FQO A;  2NVY A;  3HOY K;  3RZO K;  5C4J C;  5JVH S;  2WAQ L;  1DCP A;  1TWC K;  2JA7 K;  2JA6 K;  3OPF A;  1XXB A;  4C45 A;  2NVT K;  2PA8 D;  1XZQ A;  4GTL A;  4OIR A;  3HOY C;  3HOW K;  1WSV A;  1TWC C;  3K7A K;  2R93 A;  2Y0S L;  2JA7 C;  4AH6 A;  4A3B K;  3LAP A;  1ISE A;  3HKZ L;  3FOF A;  4WJ4 A;  5HL7 S;  3CQZ K;  4X6A C;  2VUM A;  3GTQ C;  1PJ6 A;  4YFK A;  2V6T A;  4J3N A;  5IYB K;  3HOZ C;  4JK1 A;  1O29 A;  2A6H A;  3PO3 C;  5D4D A;  3CQZ C;  1XPP A;  3FKI K;  2NVQ K;  1GE9 A;  4OIQ A;  1C0A A;  1USO A;  4A3J K;  3GIR A;  5M5Y K;  1XXC A;  5IYB C;  4GZY A;  5CHP A;  3GTL K;  4BLB A;  1SMY A;  2ZFZ A;  4KAW X;  3H0G A;  4A3G K;  4A3J C;  1USM A;  3S1M K;  1ZVU A;  4WFN S;  5M5X K;  3S1R C;  1R9T A;  3CF5 S;  4A3G C;  1K83 A;  3DLL S;  5EGH A;  1VRQ C;  4IO9 S;  4FM9 A;  3G4C A;  3SZZ A;  4BLA A;  1F9N A;  3S2H K;  4KM8 A;  2E2H A;  4C2M K;  2L3U A;  3HXA A;  4PAA A;  2R7Z K;  1I3Q C;  4A3L K;  3AQP A;  5TMF A;  3S2H C;  4LK1 A;  4XLN A;  1TWH C;  1B4A A;  2P5M A;  4A3C K;  2E2J C;  3HOX K;  1BJT A;  3HOV K;  5FJ8 K;  5C3E K;  3PO2 K;  3H3V L;  4A3M C;  4YG2 A;  2GSN A;  3ADA C;  2P8T A;  4A3C C;  3I4N K;  4LJZ A;  1RU0 A;  3GTO K;  3FOE A;  2ZJR S;  5C3E C;  1XZP B;  1WOR A;  4BY7 K; 
#chains in the Genus database with same CATH homology
 1TWF K;  2CW0 A;  2JA8 C;  4BBS K;  3H0G K;  4C3I K;  3HKZ D;  3M3Y C;  4A3I K;  3I4N C;  3M4O C;  1TWA C;  3HOY K;  3RZO K;  5C4J C;  1I50 K;  3WOD A;  4XSZ A;  2WAQ L;  1TWC K;  4A93 C;  4C2M C;  2JA6 K;  2JA7 K;  4QJV B;  2R7Z C;  1BDF A;  4A3L C;  3H0G C;  2NVT K;  4C3I C;  3PO3 K;  3S2D K;  2PA8 D;  1SFO C;  2B63 C;  5IYD K;  4OIR A;  3HOY C;  3HOW K;  1I50 C;  3S1R K;  1TWC C;  3K7A K;  4A3E K;  2Y0S L;  2JA7 C;  4A3B K;  1TWG K;  2E2I K;  3S1N C;  4OIP A;  2A68 A;  4KN4 A;  1K83 C;  3HOX C;  3S2D C;  3HKZ L;  4MEX A;  1Y1W K;  3HOV C;  5IYD C;  4Q5S A;  3CQZ K;  5C4X K;  4X6A C;  1ZYR A;  4A3E C;  1I6H C;  5IYC C;  3GTQ C;  2WB1 L;  4YFK A;  3I4M K;  4Y7N C;  3GTO C;  4XLP A;  4MEY A;  2NVY K;  3HOZ C;  3S14 C;  4JK1 A;  5IYB K;  2A6H A;  3PO3 C;  5D4D A;  3CQZ C;  1XPP A;  2E2H C;  4BY7 C;  3FKI K;  3GTJ K;  1TWF C;  4BY1 K;  4AYB L;  2NVQ K;  4OIQ A;  4BBS C;  4G7O A;  5M3M K;  4A3J K;  2JA5 K;  4Y52 K;  1I3Q K;  4C3J K;  4A3I C;  5M5Y K;  2BE5 A;  4BBR K;  3I4M C;  3RZO C;  5IYB C;  4LK0 A;  2PMZ D;  4GZY A;  4C3H K;  3H3V D;  3GTJ C;  2JA6 C;  3GTL K;  5IP9 K;  2NVX K;  2R93 K;  1TWH K;  1SMY A;  3S17 K;  4A3G K;  4BXX K;  1HQM A;  2O5J A;  4A3J C;  2JA5 C;  2A6E A;  2NVT C;  1WCM K;  3RZD K;  4C3J C;  3EQL A;  2E2J K;  1YNN A;  3S1M K;  3S1Q K;  3HOW C;  5M5X K;  3S1R C;  5C44 K;  3K7A C;  3HOU K;  3S16 K;  4A3B C;  4A3M K;  1TWG C;  2YU9 K;  2NVX C;  2R93 C;  5IP7 K;  2E2I C;  3S17 C;  4A3G C;  2VUM K;  1WCM C;  1Y1W C;  3GTP K;  2PA8 L;  3S15 K;  4A3D K;  3S1Q C;  1IW7 A;  4NOI A;  4ZH4 A;  5C4X C;  4A3K K;  2PMZ L;  2PPB A;  3HOU C;  4QIW D;  4YFX A;  2JA8 K;  4OIO A;  5FLM K;  3M3Y K;  3GTP C;  4YFN A;  3GTK K;  3M4O K;  2NVY C;  5C4J K;  4A3D C;  1YNJ A;  2A69 A;  3S2H K;  4A3K C;  3FKI C;  4BY1 C;  2NVQ C;  3GTG K;  1Y1V K;  4C2M K;  4A93 K;  4Q4Z A;  4Y52 C;  2R7Z K;  1I3Q C;  4A3L K;  5M3F K;  5FLM C;  2R92 K;  5TMC A;  1SFO K;  4BBR C;  3GTM K;  3GTK C;  4KN7 A;  3DXJ A;  2B63 K;  4A3F K;  5TMF A;  4C3H C;  3S2H C;  3GTL C;  4LK1 A;  5IP9 C;  4XLN A;  3GTG C;  1TWH C;  1Y1V C;  4QJV A;  2O5I A;  4BXX C;  4G7H A;  4QIW L;  2WB1 D;  1R9T K;  4A3C K;  3RZD C;  2E2J C;  3S1N K;  3S1M C;  1K83 K;  2R92 C;  3HOX K;  3HOV K;  3GTM C;  2WAQ D;  5FJ8 K;  5C3E K;  4KMU A;  4A3F C;  4MQ9 A;  3PO2 K;  4XSX A;  5C44 C;  4X6A K;  3S16 C;  3H3V L;  4AYB D;  4YG2 A;  4LLG A;  4A3M C;  2YU9 C;  1I6H K;  5IP7 C;  5IYC K;  2VUM C;  4G7Z A;  4A3C C;  1R9T C;  3GTQ K;  3I4N K;  1I6V A;  1TWA K;  4LJZ A;  3S15 C;  4Y7N K;  3GTO K;  5M5W K;  3HOZ K;  3S14 K;  5C3E C;  4OIN A;  2Y0S D;  3PO2 C;  2E2H K;  4BY7 K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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