4A3LC

Rna polymerase ii initial transcribing complex with a 7nt dna-rna hybrid and soaked with ampcpp
Total Genus 61
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
61
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1
publication title Structural basis of initial RNA polymerase II transcription.
pubmed doi rcsb
molecule tags Transcription
total genus 61
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-09-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 4a3lC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 4a3lC01
5C3EK 1TWHK 4QJVA 4A3DC 2Y0SL 2A68A 2E2JK 1Y1VK 3GTKC 3GTLK 4A3IK 3RZDK 5IYBC 2B63K 4X6AK 4BBRK 3S15K 2NVXC 4A93C 2A6HA 1TWCK 2YU9C 1TWFC 4A3DK 3I4MK 4AYBL 3GTKK 3HKZD 2JA6C 3I4NC 5IP9C 3EQLA 4YFXA 1I3QK 3M4OK 5IYBK 1I50C 2NVXK 4A93K 2A6EA 2YU9K 1TWFK 2E2IC 4QIWL 3H0GC 2JA6K 4XLPA 5IP9K 3S16C 3S1MC 2NVQC 5C44C 1IW7A 4BBSC 4MEYA 2WAQL 1I50K 1YNNA 3GTOC 1XPPA 4A3BC 4G7HA 4LK0A 2PPBA 4A3LC 4Y7NC 3H0GK 2E2IK 3K7AC 2JA5K 4A3JC 3S16K 3S1MK 3PO2C 2NVQK 4BBSK 4OIPA 1Y1WC 4OIRA 3GTOK 4C2MK 3M3YC 1SMYA 4XSZA 4A3LK 2CW0A 4Y7NK 2WB1L 3K7AK 4Q5SA 4XLNA 3PO2K 2PMZD 4JK1A 2E2HC 2R92C 1Y1WK 5M5WK 3HOZC 3GTQC 2Y0SD 5M5YK 3H3VL 1WCMC 1YNJA 1BDFA 3DXJA 4ZH4A 4G7ZA 3I4NK 4LK1A 3S1NC 2E2HK 3GTJC 4A3GC 3HOZK 4LLGA 4YFNA 3GTQK 4AYBD 3S2HC 4A3EC 3S1RC 1I6HC 2R93C 3WODA 1WCMK 4OIQA 2PA8L 3S1NK 4OINA 5C44K 5C4XC 4A3GK 2NVTC 5M3FK 4C3HC 5FLMC 4QIWD 2O5JA 3S2HK 3S1RK 4C3JC 1I6HK 3HOYC 5IYCC 4A3BK 5TMFA 3S17C 2R93K 1R9TC 2BE5A 2WAQD 2JA8C 3HOWC 4A3JK 5IP7C 2JA7C 3HOVC 4GZYA 3S2DK 4KMUA 3RZOC 5C3EC 5C4XK 4LJZA 4KN4A 2NVTK 3GTMC 4C3HK 4BXXC 5FLMK 1TWAC 2VUMC 3HOXC 4C3JK 3HOYK 4A3IC 4A3KC 2R7ZC 5IYCK 3M3YK 1R9TK 3S17K 1TWGC 5IYDC 3HKZL 4BY7C 3PO3C 2JA8K 5IP7K 3HOVK 3RZOK 2R92K 3FKIC 3I4MC 5FJ8K 3GTMK 4BXXK 1ZYRA 2WB1D 4A3CC 1TWAK 2VUMK 3GTPC 2A69A 3HOXK 4A3KK 2R7ZK 1I3QC 1K83C 3M4OC 3S14C 1TWGK 5IYDK 4BY7K 3PO3K 4Q4ZA 4G7OA 5M5XK 1I6VA 4BY1C 3FKIK 4NOIA 3H3VD 4A3MC 3GTJK 5C4JC 4A3CK 4YFKA 3GTGC 3GTPK 2NVYC 4A3EK 4Y52C 3CQZC 4YG2A 3HOUC 1K83K 3S14K 4A3FC 5D4DA 4C3IC 4MEXA 1SFOC 3S1QC 3S2DC 4BY1K 4OIOA 5TMCA 1TWHC 4A3MK 5C4JK 2JA5C 3GTGK 2E2JC 1Y1VC 2NVYK 3GTLC 2PA8D 1HQMA 4XSXA 3CQZK 4QJVB 4MQ9A 2O5IA 3HOUK 3S1QK 4Y52K 3RZDC 2B63C 4X6AC 5M3MK 4BBRC 4A3FK 4C3IK 3S15C 1SFOK 3HOWK 2PMZL 2JA7K 4KN7A 4C2MC 1TWCC
chains in the Genus database with same CATH superfamily
4A3DC 3HXAA 3GTLK 4A3IK 1XZQA 2B63K 4BBRK 3AD8C 1O2BA 2YU9C 3SZZA 1TWFC 4AYBL 1WSRA 5IP9C 2VUMA 3EQLA 5CJ9A 5IOSA 5IYBK 1I50C 2NVXK 4G0VA 4A93K 2E2IC 4QIWL 3H0GC 2JA6K 1IS1A 4XLPA 1ZXOA 3S16C 3TTGA 2NVQC 1BS2A 1F7UA 2GSUA 2P5MA 1YNNA 1B4AA 4A3BC 1JQWA 1O28A 4FZBA 3LPXA 2ZUFA 4KMAA 3PIPS 1C0AA 1XZPA 3GTOK 4GTDA 4C2MK 1SMYA 4A3LK 3MMLB 4XCHA 3K7AK 3GTLA 2PMZD 5M5WK 2B63A 5HQHA 4BKWA 4J3NA 1O26A 3ADAC 5JFEA 2JH3A 3OREA 4KMDA 4ZH4A 4G7ZA 2E2HK 2KQ1A 4LLGA 2NVXA 4A3EC 3S1RC 4PAAA 1WCMK 1WOOA 3L4KA 2JA6A 5C4XC 4A3GK 4LR2A 2O5JA 4C3JC 4GTCA 2R93K 1J6WA 4WILA 1VGXA 1BGWA 2JA7C 4GZYA 3RZOC 4KN4A 2NVTK 3GTMC 5CHPA 2W7VA 5IYCK 3GTOA 3S17K 4P9SA 3HKZL 5IP7K 3HOVK 2R92K 1XXCA 3IPJA 2WB1D 1TWAK 3GTPC 3HOXK 4A3KK 2R7ZK 1K83C 3CF5S 1TWGK 3LAJA 4BY7K 4Q4ZA 4G7OA 5M5XK 3FKIK 2E2HA 1O27A 1O25A 4C45A 3GTGC 1VRQC 1WCMA 5D4DA 1ZBSA 3LYWA 1EI6A 3ERED 4O2DA 3GTJA 2JA5C 1F93A 1Y1VC 1HQMA 4XSXA 4X6AC 3T00A 1SFOK 3S1QK 1JVIA 1TWCC 5TJ3A 5C3EK 1TWHK 1XZPB 4QJVA 5IOTA 2Y0SL 2E2JK 4U67S 3GTKC 3AD7C 1KQ4A 3RZDK 3N0CA 2A6HA 3TFIA 1IL2A 4A3DK 4DDQA 3I4NC 1TWAA 3S0XA 4YFXA 2R7ZA 1TWGA 4WCES 2KWAA 2YU9K 1TWFK 3FKIA 1ZVUA 5IP9K 3GEEA 1I3QA 4MEYA 2WAQL 1I50K 4GT9A 5EGEA 1XPPA 2E2IK 4G7HA 2PPBA 1G51A 3H0GK 3S16K 3PO2C 2NVQK 4WJ4A 4OIPA 2V6SA 2L3UA 1O2AA 1SFOA 3M3YC 4XSZA 1PJ5A 1TWHA 4XLNA 3SZYA 3L4JA 3HOZC 3GTQC 3GIRA 5M5YK 3H3VL 1YNJA 1WOSA 3PIOS 4KB4A 4YFNA 1J98A 4AYBD 3S2HC 2YU9A 3WODA 1TWFA 3A8KA 1EFWA 2PA8L 1V5VA 4OINA 5C44K 4P5BA 2KPUA 4QIWD 1WQFA 1I50A 3S1RK 3HOYC 5TMFA 2E2IA 1R9TC 3HOWC 3H0GA 4A3JK 4KMUA 5C4XK 4WJ3M 3CAGA 4BXXC 3OEPA 4C3JK 4A3IC 3BP3A 3TFJA 1YX2A 5IYDC 3PO3C 4GFQA 3LAPA 3RZOK 4GTLA 5FJ8K 4KASA 3GTMK 1ZYRA 5DM6S 2A69A 4WFAS 4KC6A 1L0WA 5E68A 4A3MC 1USMA 5C4JC 1IQ0A 3GTJK 3GTPK 2NVYC 4Y52C 3CQZC 4WFBS 1K83K 3FOEA 4A3FC 1PJ6A 3S2DC 4OIOA 4KB2A 3GTGK 4KATA 2GSOA 1WQHA 2O5IA 1USOA 5M3MK 1XZQB 3BP8C 3S15C 4C2MC 3GEHA 1J6VA 3N0BA 1Y1VK 3DLLS 4X6AK 2ZJRS 1ISEA 1TWCK 2JA7A 3I4MK 1UV7A 3GTMA 3GTKK 3HKZD 1O29A 1I3QK 1B4BA 4GTBA 3M4OK 3NUHA 2CFAA 1WOPA 3BUEA 3S1MC 3GTPA 4BBSC 2GAGC 1K83A 3A8JA 4LQYA 3AH5A 4LK0A 4Y7NC 3GTGA 1Y1WC 5JVHS 3AQOA 1XXBA 1XXAA 3FHZA 3V4GA 1IE0A 1IBAA 2JA5A 4Q5SA 2Y3PA 1Y1VA 2ZFZA 4M1XA 3PO2K 2R92C 2Y0SD 1TWCA 3G4CA 1HI9A 3OPFA 4RMFA 3S1NC 3GTKA 1RU0A 3HOZK 3Q3QA 4KARA 3GTQK 1VH2A 1I6HC 1O2FB 2RGRA 4C3HC 5FLMC 3S2HK 2ZJPS 1J6XA 4PABA 4A3BK 1WSVA 5HL8A 2WAQD 2JA8C 2P8TA 5C3EC 2ZJQS 1INNA 4WFNS 2VUMC 4LOWA 3HOYK 1R9TK 1ZQ1C 2FQTA 3JSTA 4BXXK 4A3CC 2L5NA 3S14C 5IYDK 3PO3K 4WF9S 1I6VA 4BY1C 2PHCB 3H3VD 4KAWX 4G0WA 4YFKA 1DD5A 2CFAB 3GTQA 4A3EK 3G4AA 4YG2A 3HOUC 1PJ7A 2EBBA 4C3IC 4MEXA 1JOEA 3A8IA 4A3MK 1WIHA 5C4JK 2NVYK 3GTLC 2PA8D 4QJVB 3CQZK 2V6TA 3T01A 5L46A 4Y52K 2B63C 4BBRC 4A3FK 3S2DK 3TFHA 2PMZL 2JA7K 4KN7A 2GAHC 5DM7S 2XCOA 3T02A 2A68A 1YCLA 5IYBC 1R9TA 3S15K 2NVXC 4A93C 4IOCS 5IORA 1FEUA 3GDZA 2JA6C 1DCOA 2A6EA 5JVOA 1EK8A 4IOAS 4BLBA 5C44C 1IW7A 4GTFA 4GTAA 3GTOC 2GSNA 4BLAA 4A3LC 1WQGA 3K7AC 2JA5K 3QX3A 4A3JC 3S1MK 2V6UA 2NVYA 1WORA 4IO9S 3CQZA 4BBSK 4OIRA 1EH1A 3AQPA 1DCHA 1VLOA 3FOFA 2CW0A 4KM9A 4Y7NK 2WB1L 2E2HC 4JK1A 1Y1WK 1DCPA 2XCQA 4G0UA 4P5AA 1WCMC 4ILDA 1BDFA 3DXJA 3I4NK 4LK1A 3GTJC 4A3GC 4KDDA 1BJTA 1GE9A 2R93C 5HL7S 4OIQA 5JVGS 1F9NA 3S1NK 2NVTC 5M3FK 2XCRB 3GSIA 4AH6A 1I6HK 5IYCC 3VA7A 3N3YA 3S17C 2BE5A 5IP7C 3HOVC 4KM8A 4FM9A 2D6FC 4LJZA 4C3HK 5FLMK 2KXYA 1TWAC 3HOXC 4A3KC 2R7ZC 3M3YK 1AB4A 2R93A 2ZUEA 1TWGC 4KMHA 2JA8K 4BY7C 3FKIC 3GEIA 1Y1WA 3I4MC 2VUMK 2FQOA 2RH6A 1I3QC 3M4OC 2R92A 4NOIA 4A3CK 4GTEA 3AD9C 3S14K 1SFOC 3S1QC 4BY1K 1X31C 5TMCA 1TWHC 1F7VA 2E2JC 5EGHA 1VJEA 3HOUK 4MQ9A 3RZDC 1EQRA 3HOWK 4C3IK 1O24A 5IOQA
chains in the Genus database with same CATH topology
5C3EK 1TWHK 4QJVA 4A3DC 2Y0SL 2A68A 2E2JK 1Y1VK 3GTKC 3GTLK 4A3IK 3RZDK 5IYBC 2B63K 4X6AK 4BBRK 3S15K 2NVXC 4A93C 2A6HA 1TWCK 2YU9C 1TWFC 4A3DK 3I4MK 4AYBL 3GTKK 3HKZD 2JA6C 3I4NC 5IP9C 3EQLA 4YFXA 1I3QK 3M4OK 5IYBK 1I50C 2NVXK 4A93K 2A6EA 2YU9K 1TWFK 2E2IC 4QIWL 3H0GC 2JA6K 4XLPA 5IP9K 3S16C 3S1MC 2NVQC 5C44C 1IW7A 4BBSC 4MEYA 2WAQL 1I50K 1YNNA 3GTOC 1XPPA 4A3BC 4G7HA 4LK0A 2PPBA 4A3LC 4Y7NC 3H0GK 2E2IK 3K7AC 2JA5K 4A3JC 3S16K 3S1MK 3PO2C 2NVQK 4BBSK 4OIPA 1Y1WC 4OIRA 3GTOK 4C2MK 3M3YC 1SMYA 4XSZA 4A3LK 2CW0A 4Y7NK 2WB1L 3K7AK 4Q5SA 4XLNA 3PO2K 2PMZD 4JK1A 2E2HC 2R92C 1Y1WK 5M5WK 3HOZC 3GTQC 2Y0SD 5M5YK 3H3VL 1WCMC 1YNJA 1BDFA 3DXJA 4ZH4A 4G7ZA 3I4NK 4LK1A 3S1NC 2E2HK 3GTJC 4A3GC 3HOZK 4LLGA 4YFNA 3GTQK 4AYBD 3S2HC 4A3EC 3S1RC 1I6HC 2R93C 3WODA 1WCMK 4OIQA 2PA8L 3S1NK 4OINA 5C44K 5C4XC 4A3GK 2NVTC 5M3FK 4C3HC 5FLMC 4QIWD 2O5JA 3S2HK 3S1RK 4C3JC 1I6HK 3HOYC 5IYCC 4A3BK 5TMFA 3S17C 2R93K 1R9TC 2BE5A 2WAQD 2JA8C 3HOWC 4A3JK 5IP7C 2JA7C 3HOVC 4GZYA 3S2DK 4KMUA 3RZOC 5C3EC 5C4XK 4LJZA 4KN4A 2NVTK 3GTMC 4C3HK 4BXXC 5FLMK 1TWAC 2VUMC 3HOXC 4C3JK 3HOYK 4A3IC 4A3KC 2R7ZC 5IYCK 3M3YK 1R9TK 3S17K 1TWGC 5IYDC 3HKZL 4BY7C 3PO3C 2JA8K 5IP7K 3HOVK 3RZOK 2R92K 3FKIC 3I4MC 5FJ8K 3GTMK 4BXXK 1ZYRA 2WB1D 4A3CC 1TWAK 2VUMK 3GTPC 2A69A 3HOXK 4A3KK 2R7ZK 1I3QC 1K83C 3M4OC 3S14C 1TWGK 5IYDK 4BY7K 3PO3K 4Q4ZA 4G7OA 5M5XK 1I6VA 4BY1C 3FKIK 4NOIA 3H3VD 4A3MC 3GTJK 5C4JC 4A3CK 4YFKA 3GTGC 3GTPK 2NVYC 4A3EK 4Y52C 3CQZC 4YG2A 3HOUC 1K83K 3S14K 4A3FC 5D4DA 4C3IC 4MEXA 1SFOC 3S1QC 3S2DC 4BY1K 4OIOA 5TMCA 1TWHC 4A3MK 5C4JK 2JA5C 3GTGK 2E2JC 1Y1VC 2NVYK 3GTLC 2PA8D 1HQMA 4XSXA 3CQZK 4QJVB 4MQ9A 2O5IA 3HOUK 3S1QK 4Y52K 3RZDC 2B63C 4X6AC 5M3MK 4BBRC 4A3FK 4C3IK 3S15C 1SFOK 3HOWK 2PMZL 2JA7K 4KN7A 4C2MC 1TWCC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5C3E K;  1TWH K;  4QJV A;  4A3D C;  2Y0S L;  2A68 A;  2E2J K;  1Y1V K;  3GTK C;  3GTL K;  4A3I K;  3RZD K;  5IYB C;  2B63 K;  4X6A K;  4BBR K;  3S15 K;  2NVX C;  4A93 C;  2A6H A;  1TWC K;  2YU9 C;  1TWF C;  4A3D K;  3I4M K;  4AYB L;  3GTK K;  3HKZ D;  2JA6 C;  3I4N C;  5IP9 C;  3EQL A;  4YFX A;  1I3Q K;  3M4O K;  5IYB K;  1I50 C;  2NVX K;  4A93 K;  2A6E A;  2YU9 K;  1TWF K;  2E2I C;  4QIW L;  3H0G C;  2JA6 K;  4XLP A;  5IP9 K;  3S16 C;  3S1M C;  2NVQ C;  5C44 C;  1IW7 A;  4BBS C;  4MEY A;  2WAQ L;  1I50 K;  1YNN A;  3GTO C;  1XPP A;  4A3B C;  4G7H A;  4LK0 A;  2PPB A;  4A3L C;  4Y7N C;  3H0G K;  2E2I K;  3K7A C;  2JA5 K;  4A3J C;  3S16 K;  3S1M K;  3PO2 C;  2NVQ K;  4BBS K;  4OIP A;  1Y1W C;  4OIR A;  3GTO K;  4C2M K;  3M3Y C;  1SMY A;  4XSZ A;  4A3L K;  2CW0 A;  4Y7N K;  2WB1 L;  3K7A K;  4Q5S A;  4XLN A;  3PO2 K;  2PMZ D;  4JK1 A;  2E2H C;  2R92 C;  1Y1W K;  5M5W K;  3HOZ C;  3GTQ C;  2Y0S D;  5M5Y K;  3H3V L;  1WCM C;  1YNJ A;  1BDF A;  3DXJ A;  4ZH4 A;  4G7Z A;  3I4N K;  4LK1 A;  3S1N C;  2E2H K;  3GTJ C;  4A3G C;  3HOZ K;  4LLG A;  4YFN A;  3GTQ K;  4AYB D;  3S2H C;  4A3E C;  3S1R C;  1I6H C;  2R93 C;  3WOD A;  1WCM K;  4OIQ A;  2PA8 L;  3S1N K;  4OIN A;  5C44 K;  5C4X C;  4A3G K;  2NVT C;  5M3F K;  4C3H C;  5FLM C;  4QIW D;  2O5J A;  3S2H K;  3S1R K;  4C3J C;  1I6H K;  3HOY C;  5IYC C;  4A3B K;  5TMF A;  3S17 C;  2R93 K;  1R9T C;  2BE5 A;  2WAQ D;  2JA8 C;  3HOW C;  4A3J K;  5IP7 C;  2JA7 C;  3HOV C;  4GZY A;  3S2D K;  4KMU A;  3RZO C;  5C3E C;  5C4X K;  4LJZ A;  4KN4 A;  2NVT K;  3GTM C;  4C3H K;  4BXX C;  5FLM K;  1TWA C;  2VUM C;  3HOX C;  4C3J K;  3HOY K;  4A3I C;  4A3K C;  2R7Z C;  5IYC K;  3M3Y K;  1R9T K;  3S17 K;  1TWG C;  5IYD C;  3HKZ L;  4BY7 C;  3PO3 C;  2JA8 K;  5IP7 K;  3HOV K;  3RZO K;  2R92 K;  3FKI C;  3I4M C;  5FJ8 K;  3GTM K;  4BXX K;  1ZYR A;  2WB1 D;  4A3C C;  1TWA K;  2VUM K;  3GTP C;  2A69 A;  3HOX K;  4A3K K;  2R7Z K;  1I3Q C;  1K83 C;  3M4O C;  3S14 C;  1TWG K;  5IYD K;  4BY7 K;  3PO3 K;  4Q4Z A;  4G7O A;  5M5X K;  1I6V A;  4BY1 C;  3FKI K;  4NOI A;  3H3V D;  4A3M C;  3GTJ K;  5C4J C;  4A3C K;  4YFK A;  3GTG C;  3GTP K;  2NVY C;  4A3E K;  4Y52 C;  3CQZ C;  4YG2 A;  3HOU C;  1K83 K;  3S14 K;  4A3F C;  5D4D A;  4C3I C;  4MEX A;  1SFO C;  3S1Q C;  3S2D C;  4BY1 K;  4OIO A;  5TMC A;  1TWH C;  4A3M K;  5C4J K;  2JA5 C;  3GTG K;  2E2J C;  1Y1V C;  2NVY K;  3GTL C;  2PA8 D;  1HQM A;  4XSX A;  3CQZ K;  4QJV B;  4MQ9 A;  2O5I A;  3HOU K;  3S1Q K;  4Y52 K;  3RZD C;  2B63 C;  4X6A C;  5M3M K;  4BBR C;  4A3F K;  4C3I K;  3S15 C;  1SFO K;  3HOW K;  2PMZ L;  2JA7 K;  4KN7 A;  4C2M C;  1TWC C; 
#chains in the Genus database with same CATH topology
 4A3D C;  3HXA A;  3GTL K;  4A3I K;  1XZQ A;  2B63 K;  4BBR K;  3AD8 C;  1O2B A;  2YU9 C;  3SZZ A;  1TWF C;  4AYB L;  1WSR A;  5IP9 C;  2VUM A;  3EQL A;  5CJ9 A;  5IOS A;  5IYB K;  1I50 C;  2NVX K;  4G0V A;  4A93 K;  2E2I C;  4QIW L;  3H0G C;  2JA6 K;  1IS1 A;  4XLP A;  1ZXO A;  3S16 C;  3TTG A;  2NVQ C;  1BS2 A;  1F7U A;  2GSU A;  2P5M A;  1YNN A;  1B4A A;  4A3B C;  1JQW A;  1O28 A;  4FZB A;  3LPX A;  2ZUF A;  4KMA A;  3PIP S;  1C0A A;  1XZP A;  3GTO K;  4GTD A;  4C2M K;  1SMY A;  4A3L K;  3MML B;  4XCH A;  3K7A K;  3GTL A;  2PMZ D;  5M5W K;  2B63 A;  5HQH A;  4BKW A;  4J3N A;  1O26 A;  3ADA C;  5JFE A;  2JH3 A;  3ORE A;  4KMD A;  4ZH4 A;  4G7Z A;  2E2H K;  2KQ1 A;  4LLG A;  2NVX A;  4A3E C;  3S1R C;  4PAA A;  1WCM K;  1WOO A;  3L4K A;  2JA6 A;  5C4X C;  4A3G K;  4LR2 A;  2O5J A;  4C3J C;  4GTC A;  2R93 K;  1J6W A;  4WIL A;  1VGX A;  1BGW A;  2JA7 C;  4GZY A;  3RZO C;  4KN4 A;  2NVT K;  3GTM C;  5CHP A;  2W7V A;  5IYC K;  3GTO A;  3S17 K;  4P9S A;  3HKZ L;  5IP7 K;  3HOV K;  2R92 K;  1XXC A;  3IPJ A;  2WB1 D;  1TWA K;  3GTP C;  3HOX K;  4A3K K;  2R7Z K;  1K83 C;  3CF5 S;  1TWG K;  3LAJ A;  4BY7 K;  4Q4Z A;  4G7O A;  5M5X K;  3FKI K;  2E2H A;  1O27 A;  1O25 A;  4C45 A;  3GTG C;  1VRQ C;  1WCM A;  5D4D A;  1ZBS A;  3LYW A;  1EI6 A;  3ERE D;  4O2D A;  3GTJ A;  2JA5 C;  1F93 A;  1Y1V C;  1HQM A;  4XSX A;  4X6A C;  3T00 A;  1SFO K;  3S1Q K;  1JVI A;  1TWC C;  5TJ3 A;  5C3E K;  1TWH K;  1XZP B;  4QJV A;  5IOT A;  2Y0S L;  2E2J K;  4U67 S;  3GTK C;  3AD7 C;  1KQ4 A;  3RZD K;  3N0C A;  2A6H A;  3TFI A;  1IL2 A;  4A3D K;  4DDQ A;  3I4N C;  1TWA A;  3S0X A;  4YFX A;  2R7Z A;  1TWG A;  4WCE S;  2KWA A;  2YU9 K;  1TWF K;  3FKI A;  1ZVU A;  5IP9 K;  3GEE A;  1I3Q A;  4MEY A;  2WAQ L;  1I50 K;  4GT9 A;  5EGE A;  1XPP A;  2E2I K;  4G7H A;  2PPB A;  1G51 A;  3H0G K;  3S16 K;  3PO2 C;  2NVQ K;  4WJ4 A;  4OIP A;  2V6S A;  2L3U A;  1O2A A;  1SFO A;  3M3Y C;  4XSZ A;  1PJ5 A;  1TWH A;  4XLN A;  3SZY A;  3L4J A;  3HOZ C;  3GTQ C;  3GIR A;  5M5Y K;  3H3V L;  1YNJ A;  1WOS A;  3PIO S;  4KB4 A;  4YFN A;  1J98 A;  4AYB D;  3S2H C;  2YU9 A;  3WOD A;  1TWF A;  3A8K A;  1EFW A;  2PA8 L;  1V5V A;  4OIN A;  5C44 K;  4P5B A;  2KPU A;  4QIW D;  1WQF A;  1I50 A;  3S1R K;  3HOY C;  5TMF A;  2E2I A;  1R9T C;  3HOW C;  3H0G A;  4A3J K;  4KMU A;  5C4X K;  4WJ3 M;  3CAG A;  4BXX C;  3OEP A;  4C3J K;  4A3I C;  3BP3 A;  3TFJ A;  1YX2 A;  5IYD C;  3PO3 C;  4GFQ A;  3LAP A;  3RZO K;  4GTL A;  5FJ8 K;  4KAS A;  3GTM K;  1ZYR A;  5DM6 S;  2A69 A;  4WFA S;  4KC6 A;  1L0W A;  5E68 A;  4A3M C;  1USM A;  5C4J C;  1IQ0 A;  3GTJ K;  3GTP K;  2NVY C;  4Y52 C;  3CQZ C;  4WFB S;  1K83 K;  3FOE A;  4A3F C;  1PJ6 A;  3S2D C;  4OIO A;  4KB2 A;  3GTG K;  4KAT A;  2GSO A;  1WQH A;  2O5I A;  1USO A;  5M3M K;  1XZQ B;  3BP8 C;  3S15 C;  4C2M C;  3GEH A;  1J6V A;  3N0B A;  1Y1V K;  3DLL S;  4X6A K;  2ZJR S;  1ISE A;  1TWC K;  2JA7 A;  3I4M K;  1UV7 A;  3GTM A;  3GTK K;  3HKZ D;  1O29 A;  1I3Q K;  1B4B A;  4GTB A;  3M4O K;  3NUH A;  2CFA A;  1WOP A;  3BUE A;  3S1M C;  3GTP A;  4BBS C;  2GAG C;  1K83 A;  3A8J A;  4LQY A;  3AH5 A;  4LK0 A;  4Y7N C;  3GTG A;  1Y1W C;  5JVH S;  3AQO A;  1XXB A;  1XXA A;  3FHZ A;  3V4G A;  1IE0 A;  1IBA A;  2JA5 A;  4Q5S A;  2Y3P A;  1Y1V A;  2ZFZ A;  4M1X A;  3PO2 K;  2R92 C;  2Y0S D;  1TWC A;  3G4C A;  1HI9 A;  3OPF A;  4RMF A;  3S1N C;  3GTK A;  1RU0 A;  3HOZ K;  3Q3Q A;  4KAR A;  3GTQ K;  1VH2 A;  1I6H C;  1O2F B;  2RGR A;  4C3H C;  5FLM C;  3S2H K;  2ZJP S;  1J6X A;  4PAB A;  4A3B K;  1WSV A;  5HL8 A;  2WAQ D;  2JA8 C;  2P8T A;  5C3E C;  2ZJQ S;  1INN A;  4WFN S;  2VUM C;  4LOW A;  3HOY K;  1R9T K;  1ZQ1 C;  2FQT A;  3JST A;  4BXX K;  4A3C C;  2L5N A;  3S14 C;  5IYD K;  3PO3 K;  4WF9 S;  1I6V A;  4BY1 C;  2PHC B;  3H3V D;  4KAW X;  4G0W A;  4YFK A;  1DD5 A;  2CFA B;  3GTQ A;  4A3E K;  3G4A A;  4YG2 A;  3HOU C;  1PJ7 A;  2EBB A;  4C3I C;  4MEX A;  1JOE A;  3A8I A;  4A3M K;  1WIH A;  5C4J K;  2NVY K;  3GTL C;  2PA8 D;  4QJV B;  3CQZ K;  2V6T A;  3T01 A;  5L46 A;  4Y52 K;  2B63 C;  4BBR C;  4A3F K;  3S2D K;  3TFH A;  2PMZ L;  2JA7 K;  4KN7 A;  2GAH C;  5DM7 S;  2XCO A;  3T02 A;  2A68 A;  1YCL A;  5IYB C;  1R9T A;  3S15 K;  2NVX C;  4A93 C;  4IOC S;  5IOR A;  1FEU A;  3GDZ A;  2JA6 C;  1DCO A;  2A6E A;  5JVO A;  1EK8 A;  4IOA S;  4BLB A;  5C44 C;  1IW7 A;  4GTF A;  4GTA A;  3GTO C;  2GSN A;  4BLA A;  4A3L C;  1WQG A;  3K7A C;  2JA5 K;  3QX3 A;  4A3J C;  3S1M K;  2V6U A;  2NVY A;  1WOR A;  4IO9 S;  3CQZ A;  4BBS K;  4OIR A;  1EH1 A;  3AQP A;  1DCH A;  1VLO A;  3FOF A;  2CW0 A;  4KM9 A;  4Y7N K;  2WB1 L;  2E2H C;  4JK1 A;  1Y1W K;  1DCP A;  2XCQ A;  4G0U A;  4P5A A;  1WCM C;  4ILD A;  1BDF A;  3DXJ A;  3I4N K;  4LK1 A;  3GTJ C;  4A3G C;  4KDD A;  1BJT A;  1GE9 A;  2R93 C;  5HL7 S;  4OIQ A;  5JVG S;  1F9N A;  3S1N K;  2NVT C;  5M3F K;  2XCR B;  3GSI A;  4AH6 A;  1I6H K;  5IYC C;  3VA7 A;  3N3Y A;  3S17 C;  2BE5 A;  5IP7 C;  3HOV C;  4KM8 A;  4FM9 A;  2D6F C;  4LJZ A;  4C3H K;  5FLM K;  2KXY A;  1TWA C;  3HOX C;  4A3K C;  2R7Z C;  3M3Y K;  1AB4 A;  2R93 A;  2ZUE A;  1TWG C;  4KMH A;  2JA8 K;  4BY7 C;  3FKI C;  3GEI A;  1Y1W A;  3I4M C;  2VUM K;  2FQO A;  2RH6 A;  1I3Q C;  3M4O C;  2R92 A;  4NOI A;  4A3C K;  4GTE A;  3AD9 C;  3S14 K;  1SFO C;  3S1Q C;  4BY1 K;  1X31 C;  5TMC A;  1TWH C;  1F7V A;  2E2J C;  5EGH A;  1VJE A;  3HOU K;  4MQ9 A;  3RZD C;  1EQR A;  3HOW K;  4C3I K;  1O24 A;  5IOQ A; 
#chains in the Genus database with same CATH homology
 5C3E K;  1TWH K;  4QJV A;  4A3D C;  2Y0S L;  2A68 A;  2E2J K;  1Y1V K;  3GTK C;  3GTL K;  4A3I K;  3RZD K;  5IYB C;  2B63 K;  4X6A K;  4BBR K;  3S15 K;  2NVX C;  4A93 C;  2A6H A;  1TWC K;  2YU9 C;  1TWF C;  4A3D K;  3I4M K;  4AYB L;  3GTK K;  3HKZ D;  2JA6 C;  3I4N C;  5IP9 C;  3EQL A;  4YFX A;  1I3Q K;  3M4O K;  5IYB K;  1I50 C;  2NVX K;  4A93 K;  2A6E A;  2YU9 K;  1TWF K;  2E2I C;  4QIW L;  3H0G C;  2JA6 K;  4XLP A;  5IP9 K;  3S16 C;  3S1M C;  2NVQ C;  5C44 C;  1IW7 A;  4BBS C;  4MEY A;  2WAQ L;  1I50 K;  1YNN A;  3GTO C;  1XPP A;  4A3B C;  4G7H A;  4LK0 A;  2PPB A;  4A3L C;  4Y7N C;  3H0G K;  2E2I K;  3K7A C;  2JA5 K;  4A3J C;  3S16 K;  3S1M K;  3PO2 C;  2NVQ K;  4BBS K;  4OIP A;  1Y1W C;  4OIR A;  3GTO K;  4C2M K;  3M3Y C;  1SMY A;  4XSZ A;  4A3L K;  2CW0 A;  4Y7N K;  2WB1 L;  3K7A K;  4Q5S A;  4XLN A;  3PO2 K;  2PMZ D;  4JK1 A;  2E2H C;  2R92 C;  1Y1W K;  5M5W K;  3HOZ C;  3GTQ C;  2Y0S D;  5M5Y K;  3H3V L;  1WCM C;  1YNJ A;  1BDF A;  3DXJ A;  4ZH4 A;  4G7Z A;  3I4N K;  4LK1 A;  3S1N C;  2E2H K;  3GTJ C;  4A3G C;  3HOZ K;  4LLG A;  4YFN A;  3GTQ K;  4AYB D;  3S2H C;  4A3E C;  3S1R C;  1I6H C;  2R93 C;  3WOD A;  1WCM K;  4OIQ A;  2PA8 L;  3S1N K;  4OIN A;  5C44 K;  5C4X C;  4A3G K;  2NVT C;  5M3F K;  4C3H C;  5FLM C;  4QIW D;  2O5J A;  3S2H K;  3S1R K;  4C3J C;  1I6H K;  3HOY C;  5IYC C;  4A3B K;  5TMF A;  3S17 C;  2R93 K;  1R9T C;  2BE5 A;  2WAQ D;  2JA8 C;  3HOW C;  4A3J K;  5IP7 C;  2JA7 C;  3HOV C;  4GZY A;  3S2D K;  4KMU A;  3RZO C;  5C3E C;  5C4X K;  4LJZ A;  4KN4 A;  2NVT K;  3GTM C;  4C3H K;  4BXX C;  5FLM K;  1TWA C;  2VUM C;  3HOX C;  4C3J K;  3HOY K;  4A3I C;  4A3K C;  2R7Z C;  5IYC K;  3M3Y K;  1R9T K;  3S17 K;  1TWG C;  5IYD C;  3HKZ L;  4BY7 C;  3PO3 C;  2JA8 K;  5IP7 K;  3HOV K;  3RZO K;  2R92 K;  3FKI C;  3I4M C;  5FJ8 K;  3GTM K;  4BXX K;  1ZYR A;  2WB1 D;  4A3C C;  1TWA K;  2VUM K;  3GTP C;  2A69 A;  3HOX K;  4A3K K;  2R7Z K;  1I3Q C;  1K83 C;  3M4O C;  3S14 C;  1TWG K;  5IYD K;  4BY7 K;  3PO3 K;  4Q4Z A;  4G7O A;  5M5X K;  1I6V A;  4BY1 C;  3FKI K;  4NOI A;  3H3V D;  4A3M C;  3GTJ K;  5C4J C;  4A3C K;  4YFK A;  3GTG C;  3GTP K;  2NVY C;  4A3E K;  4Y52 C;  3CQZ C;  4YG2 A;  3HOU C;  1K83 K;  3S14 K;  4A3F C;  5D4D A;  4C3I C;  4MEX A;  1SFO C;  3S1Q C;  3S2D C;  4BY1 K;  4OIO A;  5TMC A;  1TWH C;  4A3M K;  5C4J K;  2JA5 C;  3GTG K;  2E2J C;  1Y1V C;  2NVY K;  3GTL C;  2PA8 D;  1HQM A;  4XSX A;  3CQZ K;  4QJV B;  4MQ9 A;  2O5I A;  3HOU K;  3S1Q K;  4Y52 K;  3RZD C;  2B63 C;  4X6A C;  5M3M K;  4BBR C;  4A3F K;  4C3I K;  3S15 C;  1SFO K;  3HOW K;  2PMZ L;  2JA7 K;  4KN7 A;  4C2M C;  1TWC C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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