4A3LC

Rna polymerase ii initial transcribing complex with a 7nt dna-rna hybrid and soaked with ampcpp
Total Genus 61
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
61
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transcription
publication title Structural basis of initial RNA polymerase II transcription.
pubmed doi rcsb
molecule keywords DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1
total genus 61
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-09-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 4a3lC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 4a3lC01
4XLPA 3S14C 1TWAK 4Q4ZA 2O5IA 3H0GK 1TWHK 3GTMC 5FJ8K 4MQ9A 5C4XC 4A3FK 2VUMK 3PO2K 2NVYK 2JA8K 1R9TK 4OIRA 4BXXK 1ZYRA 4OIQA 3DXJA 5D4DA 3M3YK 2NVQK 5C4JC 5C3EC 4X6AC 4C3IC 4C3HK 4A3LC 2A6HA 4A3IK 4QJVA 4A3BK 3S1QC 2E2JC 3K7AK 4A3JK 3S1MK 1WCMK 4C3JC 2YU9C 2WAQL 1Y1WK 4G7OA 3S1RK 2E2HK 1XPPA 5IYCC 2NVTC 1SFOC 3I4NC 3GTJK 4C2MK 3HOUC 5IYDC 2WAQD 2WB1L 3GTKC 4BBRC 3HOYC 2PA8L 1SMYA 4A3DC 3GTQC 3S2HK 4LJZA 1TWFC 2A69A 4YFNA 2A6EA 3FKIC 3EQLA 4YFXA 3GTGC 3S2DK 1IW7A 1YNJA 3CQZK 3RZOK 4A3KK 3I4MK 1I3QC 2PA8D 4QIWL 4A3GC 4OINA 3S14K 4A3CC 5TMCA 4LK1A 3GTMK 2NVXC 5C4XK 4LLGA 5IP9C 3M4OC 2R93C 3HOXK 4A93C 4BY7C 4Q5SA 2Y0SL 4NOIA 1TWCC 4ZH4A 1TWGC 3HKZL 4Y52C 2JA7C 2R7ZC 3HOZC 5C4JK 1Y1VC 5C3EK 4X6AK 4C3IK 4A3LK 2JA5C 2Y0SD 2PMZL 3S1QK 2E2JK 3HKZD 5IYBC 5C44C 3GTOC 4C3JK 2YU9K 2B63K 1I50C 5IYCK 5M5WK 2NVTK 1SFOK 3I4NK 2JA6C 1I6HK 3HOUK 5IYDK 1BDFA 2A68A 5M3MK 3GTKK 2O5JA 4BBRK 3HOVC 3HOYK 5FLMC 4A3DK 3GTQK 1TWFK 2R92C 3RZDC 2WB1D 4OIOA 3FKIK 3GTGK 3S1NC 4Y7NC 4KN7A 4BBSC 3PO3C 4A3EC 3S15C 1I3QK 4YG2A 4GZYA 4A3GK 1K83C 4A3CK 2E2IC 4G7ZA 3HOWC 2NVXK 4BY1C 4QIWD 3S17C 5IP9K 4KMUA 3M4OK 2BE5A 5M5YK 4A93K 3GTLK 4BY7K 2R93K 5IP7C 5M3FK 3S16C 4QJVB 4LK0A 1TWCK 3H3VL 1YNNA 3GTPC 1TWGK 4Y52K 2JA7K 2R7ZK 3HOZK 4KN4A 4A3MC 3GTLC 1Y1VK 1TWAC 2B63C 2JA5K 3H0GC 4A3FC 1TWHC 5TMFA 2VUMC 3PO2C 3H3VD 2NVYC 2JA8C 1R9TC 5IYBK 5C44K 3GTOK 4MEXA 4BXXC 2PMZD 3HOXC 1I6VA 3M3YC 2NVQC 1I50K 3WODA 4C3HC 2JA6K 4AYBL 4JK1A 4A3IC 4XSXA 4A3BC 3HOVK 3K7AC 3S1MC 4A3JC 5FLMK 1WCMC 2R92K 1Y1WC 3RZDK 4XSZA 5M5XK 3S1NK 4YFKA 4Y7NK 4BBSK 3PO3K 3S1RC 2E2HC 4AYBD 4A3EK 3S15K 3GTJC 4C2MC 2CW0A 1K83K 4MEYA 2E2IK 3HOWK 2PPBA 4BY1K 3S2HC 3S17K 1I6HC 4OIPA 5IP7K 3S16K 3S2DC 3CQZC 3GTPK 3RZOC 4XLNA 4A3KC 1HQMA 3I4MC 4G7HA 4A3MK
chains in the Genus database with same CATH superfamily
4Q4ZA 3H0GK 3L4JA 3TTGA 3FHZA 3OREA 3PO2K 2NVYK 1R9TK 1PJ5A 4BXXK 1ISEA 3DXJA 4WILA 5C4JC 4C3IC 3TFHA 4A3LC 2GSNA 3S1MK 5EGHA 4KM9A 2E2HK 3SZYA 3BP8C 3GTQA 1AB4A 2NVTC 3I4NC 2ZJQS 3FKIA 2WB1L 4C45A 1VGXA 1SMYA 4ILDA 1VRQC 4P5BA 1USOA 2A6EA 3A8KA 4GTBA 4A3KK 3LAPA 1I3QC 2PA8D 1YX2A 3Q3QA 4G0UA 1TWCA 1TWGA 4KARA 2R93C 4A93C 4Q5SA 4ZH4A 1ZQ1C 1G51A 2JA7C 2R7ZC 4M1XA 1XXCA 3HOZC 3GTOA 5C3EK 4X6AK 2PMZL 1I50A 2E2JK 3HKZD 4C3JK 1C0AA 3TFIA 2V6TA 5IYCK 2R92A 1SFOK 1RU0A 1IL2A 2O5JA 3AD8C 1ZVUA 4PAAA 3HOYK 2CFAB 3S0XA 4OIOA 5HQHA 4BBSC 2ZJRS 3V4GA 4A3GK 5JVHS 4A3CK 3GTPA 3HOWC 1WOSA 4QIWD 5IP9K 5M5YK 2XCRB 5IP7C 5M3FK 3N0BA 1TWHA 2ZJPS 3A8IA 4Y52K 1PJ6A 4KAWX 3LAJA 4O2DA 4A3MC 3FOEA 4A3FC 5TMFA 3QX3A 1YCLA 2VUMC 1B4AA 1J6WA 3HOXC 4GT9A 1WCMA 1O29A 4C3HC 4A3IC 4XSXA 3GEEA 3K7AC 2XCQA 5FLMK 1FEUA 3BUEA 5JFEA 3S1NK 3S15K 3CF5S 2PPBA 4BY1K 3S17K 3BP3A 4OIPA 4KMAA 3GTMA 1HQMA 2P5MA 3I4MC 4G7HA 3GTLK 4XLPA 1O25A 2V6UA 1TWAK 2CFAA 2B63K 4MQ9A 4U67S 2JA8K 4J3NA 2KPUA 1O27A 2ZUEA 1O2AA 2NVQK 2YU9A 3MMLB 2A6HA 3GIRA 4A3BK 4A3JK 1Y1WK 2WAQL 4G7OA 3GTKA 3CAGA 1TWFA 4KATA 3GTJK 2RGRA 1WSRA 3HOUC 3GTGA 1WQFA 4BBRC 3GTQC 4YFNA 3FKIC 1L0WA 4YFXA 3PIPS 4BLAA 3CQZK 2NVXA 4QIWL 5IORA 5TMCA 2JH3A 4BY7C 1Y1VA 2Y0SL 4NOIA 4GFQA 2JA5A 1TWCC 1GE9A 1TWGC 1JOEA 4P5AA 5C4JK 3JSTA 4C3IK 4A3LK 3SZZA 3AQPA 3GEHA 3GTOC 2JA6A 1VJEA 2L3UA 4KB2A 1I50C 3A8JA 2NVTK 3I4NK 1I6HK 2R92C 1K83A 3LPXA 1XZPB 4Y7NC 2E2IA 4WFAS 1F9NA 1I3QK 4GZYA 3GEIA 2KXYA 4G7ZA 3AH5A 2R93K 4A93K 1XXAA 2RH6A 1VLOA 3S16C 3OPFA 4QJVB 3H0GA 1YNNA 3GTPC 2JA7K 2Y3PA 2NVYA 2R7ZK 1R9TA 3HOZK 4KN4A 1TWHC 3H3VD 3M3YC 3WODA 4AYBL 3GDZA 2E2HA 2FQTA 1DCHA 1WCMC 1WQGA 2P8TA 4BKWA 4BBSK 3S1RC 4C2MC 2CW0A 3HOWK 4KMDA 3S2HC 5CJ9A 5IP7K 3S2DC 5IOSA 3RZOC 1O28A 4XLNA 2A69A 1IE0A 4A3MK 3S14C 4A3FK 1IBAA 3GTMC 5C4XC 1XZPA 2VUMK 4OIRA 1ZYRA 4KM8A 4C3HK 4A3IK 4QJVA 4GTFA 3S1QC 3K7AK 5JVOA 1SFOA 2YU9C 5EGEA 5IYDC 3GTKC 2PA8L 4A3DC 1TWFC 3LYWA 3GTGC 1EI6A 1IW7A 1YNJA 3I4MK 2FQOA 1F7UA 2NVXC 3M4OC 1VH2A 1DCOA 1WORA 3HKZL 3T02A 4KMHA 1JVIA 1IQ0A 3G4AA 1Y1VC 2JA5C 1WSVA 2GAHC 5IYBC 5C44C 3N3YA 2L5NA 2JA6C 3HOUK 2PHCB 1BDFA 4WFNS 4BBRK 3HOVC 3GTQK 1INNA 3T01A 3RZDC 3FKIK 4GTCA 4KN7A 3PO3C 4A3EC 4YG2A 1K83C 4GTEA 2E2IC 1PJ7A 4RMFA 3OEPA 4BY7K 3GTLA 1TWAA 2B63A 4LK0A 1TWCK 1TWGK 4GTLA 2ZUFA 3H0GC 3PO2C 2NVYC 1R9TC 4KB4A 3GTOK 4BXXC 5E68A 3L4KA 2D6FC 1XXBA 2EBBA 1I50K 1WOOA 3ADAC 1Y1WA 1EH1A 4WJ4A 1EQRA 4BLBA 4FZBA 4KDDA 4JK1A 3S1MC 3GTJA 2R92K 4XSZA 3AD9C 4Y7NK 2E2HC 5TJ3A 2W7VA 4MEYA 4GTAA 3CQZA 4PABA 1J6XA 4WFBS 1I6HC 4WF9S 5IOTA 3S16K 3GTPK 4A3KC 4G0VA 4G0WA 1ZXOA 3N0CA 1ZBSA 4AH6A 4FM9A 2O5IA 4KC6A 1TWHK 2GSOA 2GSUA 3IPJA 5FJ8K 2XCOA 4OIQA 1V5VA 1JQWA 3TFJA 5D4DA 4WCES 1IS1A 3M3YK 5C3EC 4X6AC 2E2JC 2KWAA 1WCMK 4C3JC 3PIOS 3S1RK 1XPPA 5IYCC 1SFOC 1O24A 1B4BA 4LOWA 4C2MK 2WAQD 1J6VA 4KASA 3HOYC 3S2HK 4LJZA 1I3QA 1X31C 1F93A 3EQLA 3S2DK 3RZOK 2R93A 4A3GC 3AD7C 4OINA 3S14K 4A3CC 4LK1A 3GTMK 4P9SA 2V6SA 4LLGA 5IP9C 5C4XK 2R7ZA 4XCHA 3HOXK 2JA7A 4LQYA 1J98A 2KQ1A 4Y52C 5IOQA 2Y0SD 3S1QK 2YU9K 5DM7S 1XZQB 3HXAA 5M5WK 3VA7A 5IYDK 2A68A 5JVGS 1USMA 5M3MK 3GTKK 5FLMC 4A3DK 1TWFK 2WB1D 1WIHA 3GTGK 3S1NC 3S15C 1F7VA 4DDQA 1O2BA 1EFWA 2NVXK 4BY1C 3M4OK 3S17C 4KMUA 2BE5A 3G4CA 3H3VL 3AQOA 2VUMA 4IOCS 3GTLC 1Y1VK 1TWAC 2B63C 1HI9A 3DLLS 1BS2A 2JA5K 1DD5A 2JA8C 4IOAS 5C44K 5IYBK 4MEXA 3FOFA 5HL7S 2PMZD 3ERED 2GAGC 1I6VA 1WQHA 2NVQC 1O26A 5L46A 2JA6K 1O2FB 3T00A 4A3BC 3HOVK 5DM6S 4A3JC 1BJTA 1DCPA 5CHPA 1Y1WC 3RZDK 5M5XK 4YFKA 3PO3K 4AYBD 4A3EK 4LR2A 1BGWA 3NUHA 3GTJC 4IO9S 1K83K 1KQ4A 1UV7A 2E2IK 1WOPA 1XZQA 2ZFZA 5HL8A 4WJ3M 3CQZC 1EK8A 3GSIA 4GTDA
chains in the Genus database with same CATH topology
4XLPA 3S14C 1TWAK 4Q4ZA 2O5IA 3H0GK 1TWHK 3GTMC 5FJ8K 4MQ9A 5C4XC 4A3FK 2VUMK 3PO2K 2NVYK 2JA8K 1R9TK 4OIRA 4BXXK 1ZYRA 4OIQA 3DXJA 5D4DA 3M3YK 2NVQK 5C4JC 5C3EC 4X6AC 4C3IC 4C3HK 4A3LC 2A6HA 4A3IK 4QJVA 4A3BK 3S1QC 2E2JC 3K7AK 4A3JK 3S1MK 1WCMK 4C3JC 2YU9C 2WAQL 1Y1WK 4G7OA 3S1RK 2E2HK 1XPPA 5IYCC 2NVTC 1SFOC 3I4NC 3GTJK 4C2MK 3HOUC 5IYDC 2WAQD 2WB1L 3GTKC 4BBRC 3HOYC 2PA8L 1SMYA 4A3DC 3GTQC 3S2HK 4LJZA 1TWFC 2A69A 4YFNA 2A6EA 3FKIC 3EQLA 4YFXA 3GTGC 3S2DK 1IW7A 1YNJA 3CQZK 3RZOK 4A3KK 3I4MK 1I3QC 2PA8D 4QIWL 4A3GC 4OINA 3S14K 4A3CC 5TMCA 4LK1A 3GTMK 2NVXC 5C4XK 4LLGA 5IP9C 3M4OC 2R93C 3HOXK 4A93C 4BY7C 4Q5SA 2Y0SL 4NOIA 1TWCC 4ZH4A 1TWGC 3HKZL 4Y52C 2JA7C 2R7ZC 3HOZC 5C4JK 1Y1VC 5C3EK 4X6AK 4C3IK 4A3LK 2JA5C 2Y0SD 2PMZL 3S1QK 2E2JK 3HKZD 5IYBC 5C44C 3GTOC 4C3JK 2YU9K 2B63K 1I50C 5IYCK 5M5WK 2NVTK 1SFOK 3I4NK 2JA6C 1I6HK 3HOUK 5IYDK 1BDFA 2A68A 5M3MK 3GTKK 2O5JA 4BBRK 3HOVC 3HOYK 5FLMC 4A3DK 3GTQK 1TWFK 2R92C 3RZDC 2WB1D 4OIOA 3FKIK 3GTGK 3S1NC 4Y7NC 4KN7A 4BBSC 3PO3C 4A3EC 3S15C 1I3QK 4YG2A 4GZYA 4A3GK 1K83C 4A3CK 2E2IC 4G7ZA 3HOWC 2NVXK 4BY1C 4QIWD 3S17C 5IP9K 4KMUA 3M4OK 2BE5A 5M5YK 4A93K 3GTLK 4BY7K 2R93K 5IP7C 5M3FK 3S16C 4QJVB 4LK0A 1TWCK 3H3VL 1YNNA 3GTPC 1TWGK 4Y52K 2JA7K 2R7ZK 3HOZK 4KN4A 4A3MC 3GTLC 1Y1VK 1TWAC 2B63C 2JA5K 3H0GC 4A3FC 1TWHC 5TMFA 2VUMC 3PO2C 3H3VD 2NVYC 2JA8C 1R9TC 5IYBK 5C44K 3GTOK 4MEXA 4BXXC 2PMZD 3HOXC 1I6VA 3M3YC 2NVQC 1I50K 3WODA 4C3HC 2JA6K 4AYBL 4JK1A 4A3IC 4XSXA 4A3BC 3HOVK 3K7AC 3S1MC 4A3JC 5FLMK 1WCMC 2R92K 1Y1WC 3RZDK 4XSZA 5M5XK 3S1NK 4YFKA 4Y7NK 4BBSK 3PO3K 3S1RC 2E2HC 4AYBD 4A3EK 3S15K 3GTJC 4C2MC 2CW0A 1K83K 4MEYA 2E2IK 3HOWK 2PPBA 4BY1K 3S2HC 3S17K 1I6HC 4OIPA 5IP7K 3S16K 3S2DC 3CQZC 3GTPK 3RZOC 4XLNA 4A3KC 1HQMA 3I4MC 4G7HA 4A3MK
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4XLP A;  3S14 C;  1TWA K;  4Q4Z A;  2O5I A;  3H0G K;  1TWH K;  3GTM C;  5FJ8 K;  4MQ9 A;  5C4X C;  4A3F K;  2VUM K;  3PO2 K;  2NVY K;  2JA8 K;  1R9T K;  4OIR A;  4BXX K;  1ZYR A;  4OIQ A;  3DXJ A;  5D4D A;  3M3Y K;  2NVQ K;  5C4J C;  5C3E C;  4X6A C;  4C3I C;  4C3H K;  4A3L C;  2A6H A;  4A3I K;  4QJV A;  4A3B K;  3S1Q C;  2E2J C;  3K7A K;  4A3J K;  3S1M K;  1WCM K;  4C3J C;  2YU9 C;  2WAQ L;  1Y1W K;  4G7O A;  3S1R K;  2E2H K;  1XPP A;  5IYC C;  2NVT C;  1SFO C;  3I4N C;  3GTJ K;  4C2M K;  3HOU C;  5IYD C;  2WAQ D;  2WB1 L;  3GTK C;  4BBR C;  3HOY C;  2PA8 L;  1SMY A;  4A3D C;  3GTQ C;  3S2H K;  4LJZ A;  1TWF C;  2A69 A;  4YFN A;  2A6E A;  3FKI C;  3EQL A;  4YFX A;  3GTG C;  3S2D K;  1IW7 A;  1YNJ A;  3CQZ K;  3RZO K;  4A3K K;  3I4M K;  1I3Q C;  2PA8 D;  4QIW L;  4A3G C;  4OIN A;  3S14 K;  4A3C C;  5TMC A;  4LK1 A;  3GTM K;  2NVX C;  5C4X K;  4LLG A;  5IP9 C;  3M4O C;  2R93 C;  3HOX K;  4A93 C;  4BY7 C;  4Q5S A;  2Y0S L;  4NOI A;  1TWC C;  4ZH4 A;  1TWG C;  3HKZ L;  4Y52 C;  2JA7 C;  2R7Z C;  3HOZ C;  5C4J K;  1Y1V C;  5C3E K;  4X6A K;  4C3I K;  4A3L K;  2JA5 C;  2Y0S D;  2PMZ L;  3S1Q K;  2E2J K;  3HKZ D;  5IYB C;  5C44 C;  3GTO C;  4C3J K;  2YU9 K;  2B63 K;  1I50 C;  5IYC K;  5M5W K;  2NVT K;  1SFO K;  3I4N K;  2JA6 C;  1I6H K;  3HOU K;  5IYD K;  1BDF A;  2A68 A;  5M3M K;  3GTK K;  2O5J A;  4BBR K;  3HOV C;  3HOY K;  5FLM C;  4A3D K;  3GTQ K;  1TWF K;  2R92 C;  3RZD C;  2WB1 D;  4OIO A;  3FKI K;  3GTG K;  3S1N C;  4Y7N C;  4KN7 A;  4BBS C;  3PO3 C;  4A3E C;  3S15 C;  1I3Q K;  4YG2 A;  4GZY A;  4A3G K;  1K83 C;  4A3C K;  2E2I C;  4G7Z A;  3HOW C;  2NVX K;  4BY1 C;  4QIW D;  3S17 C;  5IP9 K;  4KMU A;  3M4O K;  2BE5 A;  5M5Y K;  4A93 K;  3GTL K;  4BY7 K;  2R93 K;  5IP7 C;  5M3F K;  3S16 C;  4QJV B;  4LK0 A;  1TWC K;  3H3V L;  1YNN A;  3GTP C;  1TWG K;  4Y52 K;  2JA7 K;  2R7Z K;  3HOZ K;  4KN4 A;  4A3M C;  3GTL C;  1Y1V K;  1TWA C;  2B63 C;  2JA5 K;  3H0G C;  4A3F C;  1TWH C;  5TMF A;  2VUM C;  3PO2 C;  3H3V D;  2NVY C;  2JA8 C;  1R9T C;  5IYB K;  5C44 K;  3GTO K;  4MEX A;  4BXX C;  2PMZ D;  3HOX C;  1I6V A;  3M3Y C;  2NVQ C;  1I50 K;  3WOD A;  4C3H C;  2JA6 K;  4AYB L;  4JK1 A;  4A3I C;  4XSX A;  4A3B C;  3HOV K;  3K7A C;  3S1M C;  4A3J C;  5FLM K;  1WCM C;  2R92 K;  1Y1W C;  3RZD K;  4XSZ A;  5M5X K;  3S1N K;  4YFK A;  4Y7N K;  4BBS K;  3PO3 K;  3S1R C;  2E2H C;  4AYB D;  4A3E K;  3S15 K;  3GTJ C;  4C2M C;  2CW0 A;  1K83 K;  4MEY A;  2E2I K;  3HOW K;  2PPB A;  4BY1 K;  3S2H C;  3S17 K;  1I6H C;  4OIP A;  5IP7 K;  3S16 K;  3S2D C;  3CQZ C;  3GTP K;  3RZO C;  4XLN A;  4A3K C;  1HQM A;  3I4M C;  4G7H A;  4A3M K; 
#chains in the Genus database with same CATH topology
 4Q4Z A;  3H0G K;  3L4J A;  3TTG A;  3FHZ A;  3ORE A;  3PO2 K;  2NVY K;  1R9T K;  1PJ5 A;  4BXX K;  1ISE A;  3DXJ A;  4WIL A;  5C4J C;  4C3I C;  3TFH A;  4A3L C;  2GSN A;  3S1M K;  5EGH A;  4KM9 A;  2E2H K;  3SZY A;  3BP8 C;  3GTQ A;  1AB4 A;  2NVT C;  3I4N C;  2ZJQ S;  3FKI A;  2WB1 L;  4C45 A;  1VGX A;  1SMY A;  4ILD A;  1VRQ C;  4P5B A;  1USO A;  2A6E A;  3A8K A;  4GTB A;  4A3K K;  3LAP A;  1I3Q C;  2PA8 D;  1YX2 A;  3Q3Q A;  4G0U A;  1TWC A;  1TWG A;  4KAR A;  2R93 C;  4A93 C;  4Q5S A;  4ZH4 A;  1ZQ1 C;  1G51 A;  2JA7 C;  2R7Z C;  4M1X A;  1XXC A;  3HOZ C;  3GTO A;  5C3E K;  4X6A K;  2PMZ L;  1I50 A;  2E2J K;  3HKZ D;  4C3J K;  1C0A A;  3TFI A;  2V6T A;  5IYC K;  2R92 A;  1SFO K;  1RU0 A;  1IL2 A;  2O5J A;  3AD8 C;  1ZVU A;  4PAA A;  3HOY K;  2CFA B;  3S0X A;  4OIO A;  5HQH A;  4BBS C;  2ZJR S;  3V4G A;  4A3G K;  5JVH S;  4A3C K;  3GTP A;  3HOW C;  1WOS A;  4QIW D;  5IP9 K;  5M5Y K;  2XCR B;  5IP7 C;  5M3F K;  3N0B A;  1TWH A;  2ZJP S;  3A8I A;  4Y52 K;  1PJ6 A;  4KAW X;  3LAJ A;  4O2D A;  4A3M C;  3FOE A;  4A3F C;  5TMF A;  3QX3 A;  1YCL A;  2VUM C;  1B4A A;  1J6W A;  3HOX C;  4GT9 A;  1WCM A;  1O29 A;  4C3H C;  4A3I C;  4XSX A;  3GEE A;  3K7A C;  2XCQ A;  5FLM K;  1FEU A;  3BUE A;  5JFE A;  3S1N K;  3S15 K;  3CF5 S;  2PPB A;  4BY1 K;  3S17 K;  3BP3 A;  4OIP A;  4KMA A;  3GTM A;  1HQM A;  2P5M A;  3I4M C;  4G7H A;  3GTL K;  4XLP A;  1O25 A;  2V6U A;  1TWA K;  2CFA A;  2B63 K;  4MQ9 A;  4U67 S;  2JA8 K;  4J3N A;  2KPU A;  1O27 A;  2ZUE A;  1O2A A;  2NVQ K;  2YU9 A;  3MML B;  2A6H A;  3GIR A;  4A3B K;  4A3J K;  1Y1W K;  2WAQ L;  4G7O A;  3GTK A;  3CAG A;  1TWF A;  4KAT A;  3GTJ K;  2RGR A;  1WSR A;  3HOU C;  3GTG A;  1WQF A;  4BBR C;  3GTQ C;  4YFN A;  3FKI C;  1L0W A;  4YFX A;  3PIP S;  4BLA A;  3CQZ K;  2NVX A;  4QIW L;  5IOR A;  5TMC A;  2JH3 A;  4BY7 C;  1Y1V A;  2Y0S L;  4NOI A;  4GFQ A;  2JA5 A;  1TWC C;  1GE9 A;  1TWG C;  1JOE A;  4P5A A;  5C4J K;  3JST A;  4C3I K;  4A3L K;  3SZZ A;  3AQP A;  3GEH A;  3GTO C;  2JA6 A;  1VJE A;  2L3U A;  4KB2 A;  1I50 C;  3A8J A;  2NVT K;  3I4N K;  1I6H K;  2R92 C;  1K83 A;  3LPX A;  1XZP B;  4Y7N C;  2E2I A;  4WFA S;  1F9N A;  1I3Q K;  4GZY A;  3GEI A;  2KXY A;  4G7Z A;  3AH5 A;  2R93 K;  4A93 K;  1XXA A;  2RH6 A;  1VLO A;  3S16 C;  3OPF A;  4QJV B;  3H0G A;  1YNN A;  3GTP C;  2JA7 K;  2Y3P A;  2NVY A;  2R7Z K;  1R9T A;  3HOZ K;  4KN4 A;  1TWH C;  3H3V D;  3M3Y C;  3WOD A;  4AYB L;  3GDZ A;  2E2H A;  2FQT A;  1DCH A;  1WCM C;  1WQG A;  2P8T A;  4BKW A;  4BBS K;  3S1R C;  4C2M C;  2CW0 A;  3HOW K;  4KMD A;  3S2H C;  5CJ9 A;  5IP7 K;  3S2D C;  5IOS A;  3RZO C;  1O28 A;  4XLN A;  2A69 A;  1IE0 A;  4A3M K;  3S14 C;  4A3F K;  1IBA A;  3GTM C;  5C4X C;  1XZP A;  2VUM K;  4OIR A;  1ZYR A;  4KM8 A;  4C3H K;  4A3I K;  4QJV A;  4GTF A;  3S1Q C;  3K7A K;  5JVO A;  1SFO A;  2YU9 C;  5EGE A;  5IYD C;  3GTK C;  2PA8 L;  4A3D C;  1TWF C;  3LYW A;  3GTG C;  1EI6 A;  1IW7 A;  1YNJ A;  3I4M K;  2FQO A;  1F7U A;  2NVX C;  3M4O C;  1VH2 A;  1DCO A;  1WOR A;  3HKZ L;  3T02 A;  4KMH A;  1JVI A;  1IQ0 A;  3G4A A;  1Y1V C;  2JA5 C;  1WSV A;  2GAH C;  5IYB C;  5C44 C;  3N3Y A;  2L5N A;  2JA6 C;  3HOU K;  2PHC B;  1BDF A;  4WFN S;  4BBR K;  3HOV C;  3GTQ K;  1INN A;  3T01 A;  3RZD C;  3FKI K;  4GTC A;  4KN7 A;  3PO3 C;  4A3E C;  4YG2 A;  1K83 C;  4GTE A;  2E2I C;  1PJ7 A;  4RMF A;  3OEP A;  4BY7 K;  3GTL A;  1TWA A;  2B63 A;  4LK0 A;  1TWC K;  1TWG K;  4GTL A;  2ZUF A;  3H0G C;  3PO2 C;  2NVY C;  1R9T C;  4KB4 A;  3GTO K;  4BXX C;  5E68 A;  3L4K A;  2D6F C;  1XXB A;  2EBB A;  1I50 K;  1WOO A;  3ADA C;  1Y1W A;  1EH1 A;  4WJ4 A;  1EQR A;  4BLB A;  4FZB A;  4KDD A;  4JK1 A;  3S1M C;  3GTJ A;  2R92 K;  4XSZ A;  3AD9 C;  4Y7N K;  2E2H C;  5TJ3 A;  2W7V A;  4MEY A;  4GTA A;  3CQZ A;  4PAB A;  1J6X A;  4WFB S;  1I6H C;  4WF9 S;  5IOT A;  3S16 K;  3GTP K;  4A3K C;  4G0V A;  4G0W A;  1ZXO A;  3N0C A;  1ZBS A;  4AH6 A;  4FM9 A;  2O5I A;  4KC6 A;  1TWH K;  2GSO A;  2GSU A;  3IPJ A;  5FJ8 K;  2XCO A;  4OIQ A;  1V5V A;  1JQW A;  3TFJ A;  5D4D A;  4WCE S;  1IS1 A;  3M3Y K;  5C3E C;  4X6A C;  2E2J C;  2KWA A;  1WCM K;  4C3J C;  3PIO S;  3S1R K;  1XPP A;  5IYC C;  1SFO C;  1O24 A;  1B4B A;  4LOW A;  4C2M K;  2WAQ D;  1J6V A;  4KAS A;  3HOY C;  3S2H K;  4LJZ A;  1I3Q A;  1X31 C;  1F93 A;  3EQL A;  3S2D K;  3RZO K;  2R93 A;  4A3G C;  3AD7 C;  4OIN A;  3S14 K;  4A3C C;  4LK1 A;  3GTM K;  4P9S A;  2V6S A;  4LLG A;  5IP9 C;  5C4X K;  2R7Z A;  4XCH A;  3HOX K;  2JA7 A;  4LQY A;  1J98 A;  2KQ1 A;  4Y52 C;  5IOQ A;  2Y0S D;  3S1Q K;  2YU9 K;  5DM7 S;  1XZQ B;  3HXA A;  5M5W K;  3VA7 A;  5IYD K;  2A68 A;  5JVG S;  1USM A;  5M3M K;  3GTK K;  5FLM C;  4A3D K;  1TWF K;  2WB1 D;  1WIH A;  3GTG K;  3S1N C;  3S15 C;  1F7V A;  4DDQ A;  1O2B A;  1EFW A;  2NVX K;  4BY1 C;  3M4O K;  3S17 C;  4KMU A;  2BE5 A;  3G4C A;  3H3V L;  3AQO A;  2VUM A;  4IOC S;  3GTL C;  1Y1V K;  1TWA C;  2B63 C;  1HI9 A;  3DLL S;  1BS2 A;  2JA5 K;  1DD5 A;  2JA8 C;  4IOA S;  5C44 K;  5IYB K;  4MEX A;  3FOF A;  5HL7 S;  2PMZ D;  3ERE D;  2GAG C;  1I6V A;  1WQH A;  2NVQ C;  1O26 A;  5L46 A;  2JA6 K;  1O2F B;  3T00 A;  4A3B C;  3HOV K;  5DM6 S;  4A3J C;  1BJT A;  1DCP A;  5CHP A;  1Y1W C;  3RZD K;  5M5X K;  4YFK A;  3PO3 K;  4AYB D;  4A3E K;  4LR2 A;  1BGW A;  3NUH A;  3GTJ C;  4IO9 S;  1K83 K;  1KQ4 A;  1UV7 A;  2E2I K;  1WOP A;  1XZQ A;  2ZFZ A;  5HL8 A;  4WJ3 M;  3CQZ C;  1EK8 A;  3GSI A;  4GTD A; 
#chains in the Genus database with same CATH homology
 4XLP A;  3S14 C;  1TWA K;  4Q4Z A;  2O5I A;  3H0G K;  1TWH K;  3GTM C;  5FJ8 K;  4MQ9 A;  5C4X C;  4A3F K;  2VUM K;  3PO2 K;  2NVY K;  2JA8 K;  1R9T K;  4OIR A;  4BXX K;  1ZYR A;  4OIQ A;  3DXJ A;  5D4D A;  3M3Y K;  2NVQ K;  5C4J C;  5C3E C;  4X6A C;  4C3I C;  4C3H K;  4A3L C;  2A6H A;  4A3I K;  4QJV A;  4A3B K;  3S1Q C;  2E2J C;  3K7A K;  4A3J K;  3S1M K;  1WCM K;  4C3J C;  2YU9 C;  2WAQ L;  1Y1W K;  4G7O A;  3S1R K;  2E2H K;  1XPP A;  5IYC C;  2NVT C;  1SFO C;  3I4N C;  3GTJ K;  4C2M K;  3HOU C;  5IYD C;  2WAQ D;  2WB1 L;  3GTK C;  4BBR C;  3HOY C;  2PA8 L;  1SMY A;  4A3D C;  3GTQ C;  3S2H K;  4LJZ A;  1TWF C;  2A69 A;  4YFN A;  2A6E A;  3FKI C;  3EQL A;  4YFX A;  3GTG C;  3S2D K;  1IW7 A;  1YNJ A;  3CQZ K;  3RZO K;  4A3K K;  3I4M K;  1I3Q C;  2PA8 D;  4QIW L;  4A3G C;  4OIN A;  3S14 K;  4A3C C;  5TMC A;  4LK1 A;  3GTM K;  2NVX C;  5C4X K;  4LLG A;  5IP9 C;  3M4O C;  2R93 C;  3HOX K;  4A93 C;  4BY7 C;  4Q5S A;  2Y0S L;  4NOI A;  1TWC C;  4ZH4 A;  1TWG C;  3HKZ L;  4Y52 C;  2JA7 C;  2R7Z C;  3HOZ C;  5C4J K;  1Y1V C;  5C3E K;  4X6A K;  4C3I K;  4A3L K;  2JA5 C;  2Y0S D;  2PMZ L;  3S1Q K;  2E2J K;  3HKZ D;  5IYB C;  5C44 C;  3GTO C;  4C3J K;  2YU9 K;  2B63 K;  1I50 C;  5IYC K;  5M5W K;  2NVT K;  1SFO K;  3I4N K;  2JA6 C;  1I6H K;  3HOU K;  5IYD K;  1BDF A;  2A68 A;  5M3M K;  3GTK K;  2O5J A;  4BBR K;  3HOV C;  3HOY K;  5FLM C;  4A3D K;  3GTQ K;  1TWF K;  2R92 C;  3RZD C;  2WB1 D;  4OIO A;  3FKI K;  3GTG K;  3S1N C;  4Y7N C;  4KN7 A;  4BBS C;  3PO3 C;  4A3E C;  3S15 C;  1I3Q K;  4YG2 A;  4GZY A;  4A3G K;  1K83 C;  4A3C K;  2E2I C;  4G7Z A;  3HOW C;  2NVX K;  4BY1 C;  4QIW D;  3S17 C;  5IP9 K;  4KMU A;  3M4O K;  2BE5 A;  5M5Y K;  4A93 K;  3GTL K;  4BY7 K;  2R93 K;  5IP7 C;  5M3F K;  3S16 C;  4QJV B;  4LK0 A;  1TWC K;  3H3V L;  1YNN A;  3GTP C;  1TWG K;  4Y52 K;  2JA7 K;  2R7Z K;  3HOZ K;  4KN4 A;  4A3M C;  3GTL C;  1Y1V K;  1TWA C;  2B63 C;  2JA5 K;  3H0G C;  4A3F C;  1TWH C;  5TMF A;  2VUM C;  3PO2 C;  3H3V D;  2NVY C;  2JA8 C;  1R9T C;  5IYB K;  5C44 K;  3GTO K;  4MEX A;  4BXX C;  2PMZ D;  3HOX C;  1I6V A;  3M3Y C;  2NVQ C;  1I50 K;  3WOD A;  4C3H C;  2JA6 K;  4AYB L;  4JK1 A;  4A3I C;  4XSX A;  4A3B C;  3HOV K;  3K7A C;  3S1M C;  4A3J C;  5FLM K;  1WCM C;  2R92 K;  1Y1W C;  3RZD K;  4XSZ A;  5M5X K;  3S1N K;  4YFK A;  4Y7N K;  4BBS K;  3PO3 K;  3S1R C;  2E2H C;  4AYB D;  4A3E K;  3S15 K;  3GTJ C;  4C2M C;  2CW0 A;  1K83 K;  4MEY A;  2E2I K;  3HOW K;  2PPB A;  4BY1 K;  3S2H C;  3S17 K;  1I6H C;  4OIP A;  5IP7 K;  3S16 K;  3S2D C;  3CQZ C;  3GTP K;  3RZO C;  4XLN A;  4A3K C;  1HQM A;  3I4M C;  4G7H A;  4A3M K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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