2YU9C

Rna polymerase ii elongation complex in 150 mm mg+2 with utp
Total Genus 40
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
40
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords 5'-R(*AP*UP*CP*GP*AP*GP*AP*GP*GP*A)-3'
publication title Structural Basis of Transcription: Role of the Trigger Loop in Substrate Specificity and Catalysis
pubmed doi rcsb
molecule tags Transcription,transferase/dna-rna hybrid
total genus 40
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2007-04-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 2yu9C02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 2yu9C01
4A3IK 3RZDC 2E2HC 4A3LK 1TWGC 4XLNA 2YU9C 4A3IC 4A3LC 5C44K 5TMCA 5M5YK 3GTMK 4BXXK 2PMZL 5C44C 4LLGA 1WCMK 4QIWL 5C4JK 3S16K 4BBSK 3GTMC 4BXXC 2PA8L 1WCMC 2JA7K 4A3BK 5C4JC 3S16C 2Y0SD 4BBSC 5IYBK 2JA5K 2A6EA 4BY7K 2JA7C 4A3BC 3WODA 4BY1K 5IYBC 4BY7C 2JA5C 4NOIA 4BY1C 1Y1VK 1YNNA 4QJVA 4YFNA 3PO2K 5C4XK 1Y1VC 4A93K 2WB1L 3PO2C 4Q4ZA 5C4XC 4A93C 5M3FK 4YFKA 3FKIK 4A3JK 4XLPA 2A69A 4C3HK 4A3DK 3FKIC 4OIQA 4A3JC 3HOZK 2PA8D 4C3HC 4A3DC 5FLMK 4A3GK 3S15K 3HOZC 3HOVK 3GTLK 5FLMC 4XSZA 4A3GC 3S15C 2VUMK 3HOVC 5M5XK 3GTLC 3HOYK 2O5IA 4KMUA 4Y52K 2VUMC 2YU9K 5M3MK 3HOYC 4Y52C 2WAQL 2WB1D 4MEXA 3HOWK 5IYCK 3H0GK 3HOWC 5C3EK 4Y7NK 4C2MK 1TWFK 2B63K 4LJZA 5IYCC 3H0GC 2R92K 5C3EC 4Y7NC 4C2MC 1TWFC 2B63C 4Q5SA 4XSXA 2R92C 2NVYK 3CQZK 2NVTK 3GTJK 3GTOK 1TWAK 2NVYC 3CQZC 3HOXK 2NVTC 3GTJC 2CW0A 1SFOK 4AYBL 3M3YK 1TWCK 1TWAC 3HKZL 3HOXC 3M3YC 2JA6K 2PMZD 1SFOC 2PPBA 4QIWD 4KN7A 1TWCC 2JA6C 5IYDK 3S1MK 1I6HK 3S2DK 3S2HK 5IYDC 3S1MC 4GZYA 1I6HC 3S2DC 4A3FK 3K7AK 3S17K 3S2HC 1I50K 4A3FC 4A3EK 4MEYA 3S17C 3K7AC 4YG2A 5D4DA 4C3IK 4A3EC 1I50C 2NVXK 3RZOK 4C3IC 2NVXC 2BE5A 3GTKK 4BBRK 3RZOC 1XPPA 1HQMA 2E2JK 3S1QK 2R93K 3GTKC 4AYBD 4BBRC 4OIRA 3M4OK 3S1QC 2E2JC 2R93C 1I3QK 3GTPK 1ZYRA 3M4OC 3S14K 4ZH4A 1Y1WK 1YNJA 1I3QC 4OINA 3GTPC 4C3JK 1R9TK 3PO3K 4A3CK 3S14C 1R9TC 1Y1WC 4A3CC 4C3JC 2O5JA 5IP7K 4A3KK 2NVQK 3PO3C 3H3VL 4G7HA 5IP7C 4QJVB 4A3KC 2NVQC 2R7ZK 3GTOC 3S1RK 2R7ZC 1SMYA 2A6HA 4LK0A 2JA8K 3S1RC 2WAQD 5M5WK 3GTGK 2JA8C 4G7OA 1I6VA 5FJ8K 3I4NK 4OIOA 4YFXA 3EQLA 3GTGC 3S1NK 4OIPA 3I4NC 1K83K 3S1NC 1K83C 3DXJA 4G7ZA 3H3VD 1TWHK 1BDFA 4MQ9A 3HOUK 1TWHC 3HKZD 4JK1A 2A68A 4X6AK 5IP9K 5TMFA 3HOUC 2Y0SL 4LK1A 4KN4A 4X6AC 4A3MK 3I4MK 5IP9C 1IW7A 4A3MC 3I4MC 2E2IK 3GTQK 3RZDK 2E2HK 1TWGK 2E2IC 3GTQC
chains in the Genus database with same CATH superfamily
3RZDC 2E2HC 5HQHA 2YU9C 1O2BA 4GTFA 4A3IC 2JA5A 5M5YK 1VGXA 4QIWL 5C4JK 3S16K 2D6FC 4IOCS 4WJ3M 5IYBK 2JA5K 3AH5A 3WODA 4BY7C 2XCQA 1IE0A 1VLOA 1V5VA 5E68A 3HXAA 4YFNA 1F9NA 1Y1VC 4A93K 2WB1L 3PO2C 2YU9A 3TTGA 3AQOA 4A3JK 4A3DK 2PA8D 4WFBS 4A3GK 3HOVK 4PAAA 5FLMC 5JFEA 4AH6A 4LOWA 2V6TA 1TWFA 5M3MK 4Y52C 3HOWC 5C3EK 4IOAS 4C2MK 1TWFK 1PJ6A 1FEUA 2GSOA 4XCHA 4XSXA 1AB4A 2NVTK 4GTLA 2NVYC 3CQZC 4AYBL 3GEIA 1TWAC 3HOXC 1ZBSA 5IYDK 1ISEA 4RMFA 3S1MC 3S2DC 3S17K 3S2HC 4A3FC 3K7AC 4C3IK 4A3EC 1I50C 1DCOA 4P5AA 3RZOC 3AD9C 4BBRC 4OIRA 3GTOA 3S14K 4ZH4A 4A3CK 4OINA 3GTPC 1R9TC 5CJ9A 4C3JC 3A8KA 3H3VL 3BP8C 3GTGA 3OREA 4A3KC 1IS1A 4QJVB 1C0AA 1WSRA 1JQWA 1SMYA 2A6HA 4LK0A 1K83A 2Y3PA 2ZJRS 5M5WK 1WIHA 3GTGK 1I6VA 1VRQC 5FJ8K 3S1NK 3I4NC 1K83K 2JH3A 3JSTA 2ZFZA 3DXJA 3IPJA 3PIPS 3HOUK 1TWHC 4WFAS 2KWAA 1EK8A 5TMFA 1TWGA 2Y0SL 4X6AC 4GFQA 4KM9A 4A3MC 3TFHA 3I4MC 4DDQA 1TWGK 1J98A 1WCMA 5CHPA 1J6WA 4A3LK 4XLNA 4G0UA 3OPFA 5DM7S 1WCMK 2PMZL 4C45A 2V6UA 5C4JC 3S16C 2A6EA 4BY1K 5IYBC 2JA5C 1WQFA 4NOIA 4QJVA 4KAWX 3T02A 1INNA 2L5NA 1WORA 1DCPA 4A93C 3GTLA 4ILDA 3LYWA 4C3HK 4A3JC 3HOZK 1IQ0A 4A3DC 3S15K 3ADAC 3GTLK 4KASA 4A3GC 1WOOA 3HOVC 3HOYK 4M1XA 4LQYA 2R92A 1WQHA 5HL7S 2WAQL 2WB1D 2XCOA 2CFAA 3GTJA 2V6SA 2FQTA 4Y7NK 4LJZA 3BUEA 2R92K 5C3EC 2RGRA 4C2MC 1TWFC 4Q5SA 4WILA 2JA6A 3GTJK 3M3YK 2NVTC 3S0XA 2GSUA 3HKZL 2JA6K 1JOEA 5IYDC 3N0CA 5IOTA 2R93A 4MEYA 3S17C 4GTAA 5D4DA 1I3QA 4WJ4A 4C3IC 1G51A 1EFWA 2BE5A 1Y1WA 4GTBA 1HQMA 2E2JK 2R93K 4AYBD 3M4OK 1I3QK 2R7ZA 1Y1WK 3PO3K 4J3NA 3S14C 3CAGA 5IP7K 4A3CC 2NVQK 3TFJA 4G7HA 2GAGC 2R7ZK 3GTOC 3S1RK 2PHCB 3L4KA 2JA8K 1O27A 4P9SA 2P5MA 4YFXA 3GTGC 1USOA 1BGWA 2W7VA 3S1NC 1K83C 1BS2A 1PJ7A 3H3VD 4KMDA 1KQ4A 1O2FB 4JK1A 2ZUFA 2A68A 3HOUC 3CF5S 1O25A 4KN4A 1WOPA 5JVOA 3NUHA 3N3YA 1VH2A 3T00A 1EQRA 4GTCA 5EGEA 1BJTA 3Q3QA 2JA7A 1TWGC 4A3LC 5C44K 3GTMK 4BXXK 1O29A 4LLGA 4BBSK 2JA7K 4A3BK 1WCMC 2Y0SD 4G0VA 3G4AA 1WSVA 1USMA 4BY1C 3FKIA 1F93A 5C4XK 4G0WA 4KMHA 1O26A 3FKIK 5L46A 2VUMA 4OIQA 1ZXOA 4C3HC 4WF9S 3HOZC 5JVHS 4XSZA 2VUMK 3S15C 1WOSA 3GTLC 3H0GA 2O5IA 4KMUA 2B63A 1F7VA 3HOYC 4MEXA 3SZZA 5IYCK 3H0GK 4GT9A 1RU0A 2B63K 2ZJQS 1SFOA 1TWCA 4Y7NC 5IOQA 2R92C 3GTJC 2CW0A 1SFOK 1TWCK 3VA7A 3M3YC 2PPBA 4QIWD 2JA6C 1I6HK 1IBAA 2NVXA 4KM8A 4GZYA 2L3UA 3GTKA 4U67S 2P8TA 4KMAA 1HI9A 2NVXK 2ZUEA 4IO9S 3GTKK 4BLBA 4KATA 3DLLS 3S1QK 4LR2A 2E2JC 2R93C 1ZYRA 3M4OC 1I3QC 3FOEA 1ZQ1C 3QX3A 1Y1WC 3GEEA 3PO3C 5IP7C 2NVQC 4KDDA 1J6VA 1O2AA 2R7ZC 3S1RC 2JA8C 1XXCA 1XZQB 4OIOA 1VJEA 4OIPA 1X31C 3AD8C 1O24A 3AQPA 1O28A 3N0BA 2ZJPS 1GE9A 4MQ9A 2E2IA 3GDZA 3GTQA 2E2HA 3FHZA 5IP9K 1EH1A 4LK1A 4WCES 4O2DA 1PJ5A 3G4CA 2E2IK 3GTQK 3RZDK 2E2HK 2RH6A 2YU9K 3T01A 4A3IK 2XCRB 3L4JA 5TMCA 3ERED 5IOSA 4FZBA 5C44C 3A8JA 3GTMC 1Y1VA 4BXXC 2PA8L 4FM9A 2EBBA 4BBSC 4BY7K 2JA7C 4A3BC 4GTEA 4BLAA 5IORA 5TJ3A 1B4AA 1XXAA 1Y1VK 1YNNA 5HL8A 3V4GA 3LAPA 3PO2K 3A8IA 4Q4ZA 5C4XC 3SZYA 4KARA 5M3FK 4YFKA 1WQGA 1XZPB 3FOFA 1XZQA 4XLPA 2A69A 2GSNA 4KC6A 3FKIC 3GTMA 5FLMK 3BP3A 1XXBA 1B4BA 5M5XK 1EI6A 4Y52K 2VUMC 3OEPA 3HOWK 2NVYA 3CQZA 1TWAA 5IYCC 3H0GC 4GTDA 2B63C 3AD7C 4PABA 2NVYK 3CQZK 5EGHA 3GTOK 1TWAK 3HOXK 4KB2A 1I50A 2PMZD 1SFOC 4KN7A 1TWCC 3S1MK 3S2DK 3S2HK 1DCHA 4A3FK 1I6HC 3GIRA 3K7AK 4KB4A 4A3EK 1I50K 3LAJA 4YG2A 3RZOK 3GTPA 3MMLB 2KQ1A 1R9TA 2NVXC 4BBRK 1YX2A 1XPPA 4P5BA 3PIOS 3GTKC 4BKWA 5JVGS 3S1QC 1XZPA 3GTPK 1L0WA 2CFAB 1R9TK 1YNJA 4C3JK 1IL2A 2O5JA 2GAHC 4A3KK 1DD5A 2FQOA 3TFIA 1JVIA 2WAQD 3GSIA 1UV7A 3GEHA 3LPXA 4G7OA 3I4NK 3EQLA 1TWHA 1J6XA 1YCLA 2KXYA 4G7ZA 1ZVUA 2KPUA 1TWHK 1BDFA 3HKZD 4X6AK 4WFNS 1F7UA 5DM6S 4A3MK 3I4MK 5IP9C 1IW7A 2E2IC 3GTQC
chains in the Genus database with same CATH topology
4A3IK 3RZDC 2E2HC 4A3LK 1TWGC 4XLNA 2YU9C 4A3IC 4A3LC 5C44K 5TMCA 5M5YK 3GTMK 4BXXK 2PMZL 5C44C 4LLGA 1WCMK 4QIWL 5C4JK 3S16K 4BBSK 3GTMC 4BXXC 2PA8L 1WCMC 2JA7K 4A3BK 5C4JC 3S16C 2Y0SD 4BBSC 5IYBK 2JA5K 2A6EA 4BY7K 2JA7C 4A3BC 3WODA 4BY1K 5IYBC 4BY7C 2JA5C 4NOIA 4BY1C 1Y1VK 1YNNA 4QJVA 4YFNA 3PO2K 5C4XK 1Y1VC 4A93K 2WB1L 3PO2C 4Q4ZA 5C4XC 4A93C 5M3FK 4YFKA 3FKIK 4A3JK 4XLPA 2A69A 4C3HK 4A3DK 3FKIC 4OIQA 4A3JC 3HOZK 2PA8D 4C3HC 4A3DC 5FLMK 4A3GK 3S15K 3HOZC 3HOVK 3GTLK 5FLMC 4XSZA 4A3GC 3S15C 2VUMK 3HOVC 5M5XK 3GTLC 3HOYK 2O5IA 4KMUA 4Y52K 2VUMC 2YU9K 5M3MK 3HOYC 4Y52C 2WAQL 2WB1D 4MEXA 3HOWK 5IYCK 3H0GK 3HOWC 5C3EK 4Y7NK 4C2MK 1TWFK 2B63K 4LJZA 5IYCC 3H0GC 2R92K 5C3EC 4Y7NC 4C2MC 1TWFC 2B63C 4Q5SA 4XSXA 2R92C 2NVYK 3CQZK 2NVTK 3GTJK 3GTOK 1TWAK 2NVYC 3CQZC 3HOXK 2NVTC 3GTJC 2CW0A 1SFOK 4AYBL 3M3YK 1TWCK 1TWAC 3HKZL 3HOXC 3M3YC 2JA6K 2PMZD 1SFOC 2PPBA 4QIWD 4KN7A 1TWCC 2JA6C 5IYDK 3S1MK 1I6HK 3S2DK 3S2HK 5IYDC 3S1MC 4GZYA 1I6HC 3S2DC 4A3FK 3K7AK 3S17K 3S2HC 1I50K 4A3FC 4A3EK 4MEYA 3S17C 3K7AC 4YG2A 5D4DA 4C3IK 4A3EC 1I50C 2NVXK 3RZOK 4C3IC 2NVXC 2BE5A 3GTKK 4BBRK 3RZOC 1XPPA 1HQMA 2E2JK 3S1QK 2R93K 3GTKC 4AYBD 4BBRC 4OIRA 3M4OK 3S1QC 2E2JC 2R93C 1I3QK 3GTPK 1ZYRA 3M4OC 3S14K 4ZH4A 1Y1WK 1YNJA 1I3QC 4OINA 3GTPC 4C3JK 1R9TK 3PO3K 4A3CK 3S14C 1R9TC 1Y1WC 4A3CC 4C3JC 2O5JA 5IP7K 4A3KK 2NVQK 3PO3C 3H3VL 4G7HA 5IP7C 4QJVB 4A3KC 2NVQC 2R7ZK 3GTOC 3S1RK 2R7ZC 1SMYA 2A6HA 4LK0A 2JA8K 3S1RC 2WAQD 5M5WK 3GTGK 2JA8C 4G7OA 1I6VA 5FJ8K 3I4NK 4OIOA 4YFXA 3EQLA 3GTGC 3S1NK 4OIPA 3I4NC 1K83K 3S1NC 1K83C 3DXJA 4G7ZA 3H3VD 1TWHK 1BDFA 4MQ9A 3HOUK 1TWHC 3HKZD 4JK1A 2A68A 4X6AK 5IP9K 5TMFA 3HOUC 2Y0SL 4LK1A 4KN4A 4X6AC 4A3MK 3I4MK 5IP9C 1IW7A 4A3MC 3I4MC 2E2IK 3GTQK 3RZDK 2E2HK 1TWGK 2E2IC 3GTQC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4A3I K;  3RZD C;  2E2H C;  4A3L K;  1TWG C;  4XLN A;  2YU9 C;  4A3I C;  4A3L C;  5C44 K;  5TMC A;  5M5Y K;  3GTM K;  4BXX K;  2PMZ L;  5C44 C;  4LLG A;  1WCM K;  4QIW L;  5C4J K;  3S16 K;  4BBS K;  3GTM C;  4BXX C;  2PA8 L;  1WCM C;  2JA7 K;  4A3B K;  5C4J C;  3S16 C;  2Y0S D;  4BBS C;  5IYB K;  2JA5 K;  2A6E A;  4BY7 K;  2JA7 C;  4A3B C;  3WOD A;  4BY1 K;  5IYB C;  4BY7 C;  2JA5 C;  4NOI A;  4BY1 C;  1Y1V K;  1YNN A;  4QJV A;  4YFN A;  3PO2 K;  5C4X K;  1Y1V C;  4A93 K;  2WB1 L;  3PO2 C;  4Q4Z A;  5C4X C;  4A93 C;  5M3F K;  4YFK A;  3FKI K;  4A3J K;  4XLP A;  2A69 A;  4C3H K;  4A3D K;  3FKI C;  4OIQ A;  4A3J C;  3HOZ K;  2PA8 D;  4C3H C;  4A3D C;  5FLM K;  4A3G K;  3S15 K;  3HOZ C;  3HOV K;  3GTL K;  5FLM C;  4XSZ A;  4A3G C;  3S15 C;  2VUM K;  3HOV C;  5M5X K;  3GTL C;  3HOY K;  2O5I A;  4KMU A;  4Y52 K;  2VUM C;  2YU9 K;  5M3M K;  3HOY C;  4Y52 C;  2WAQ L;  2WB1 D;  4MEX A;  3HOW K;  5IYC K;  3H0G K;  3HOW C;  5C3E K;  4Y7N K;  4C2M K;  1TWF K;  2B63 K;  4LJZ A;  5IYC C;  3H0G C;  2R92 K;  5C3E C;  4Y7N C;  4C2M C;  1TWF C;  2B63 C;  4Q5S A;  4XSX A;  2R92 C;  2NVY K;  3CQZ K;  2NVT K;  3GTJ K;  3GTO K;  1TWA K;  2NVY C;  3CQZ C;  3HOX K;  2NVT C;  3GTJ C;  2CW0 A;  1SFO K;  4AYB L;  3M3Y K;  1TWC K;  1TWA C;  3HKZ L;  3HOX C;  3M3Y C;  2JA6 K;  2PMZ D;  1SFO C;  2PPB A;  4QIW D;  4KN7 A;  1TWC C;  2JA6 C;  5IYD K;  3S1M K;  1I6H K;  3S2D K;  3S2H K;  5IYD C;  3S1M C;  4GZY A;  1I6H C;  3S2D C;  4A3F K;  3K7A K;  3S17 K;  3S2H C;  1I50 K;  4A3F C;  4A3E K;  4MEY A;  3S17 C;  3K7A C;  4YG2 A;  5D4D A;  4C3I K;  4A3E C;  1I50 C;  2NVX K;  3RZO K;  4C3I C;  2NVX C;  2BE5 A;  3GTK K;  4BBR K;  3RZO C;  1XPP A;  1HQM A;  2E2J K;  3S1Q K;  2R93 K;  3GTK C;  4AYB D;  4BBR C;  4OIR A;  3M4O K;  3S1Q C;  2E2J C;  2R93 C;  1I3Q K;  3GTP K;  1ZYR A;  3M4O C;  3S14 K;  4ZH4 A;  1Y1W K;  1YNJ A;  1I3Q C;  4OIN A;  3GTP C;  4C3J K;  1R9T K;  3PO3 K;  4A3C K;  3S14 C;  1R9T C;  1Y1W C;  4A3C C;  4C3J C;  2O5J A;  5IP7 K;  4A3K K;  2NVQ K;  3PO3 C;  3H3V L;  4G7H A;  5IP7 C;  4QJV B;  4A3K C;  2NVQ C;  2R7Z K;  3GTO C;  3S1R K;  2R7Z C;  1SMY A;  2A6H A;  4LK0 A;  2JA8 K;  3S1R C;  2WAQ D;  5M5W K;  3GTG K;  2JA8 C;  4G7O A;  1I6V A;  5FJ8 K;  3I4N K;  4OIO A;  4YFX A;  3EQL A;  3GTG C;  3S1N K;  4OIP A;  3I4N C;  1K83 K;  3S1N C;  1K83 C;  3DXJ A;  4G7Z A;  3H3V D;  1TWH K;  1BDF A;  4MQ9 A;  3HOU K;  1TWH C;  3HKZ D;  4JK1 A;  2A68 A;  4X6A K;  5IP9 K;  5TMF A;  3HOU C;  2Y0S L;  4LK1 A;  4KN4 A;  4X6A C;  4A3M K;  3I4M K;  5IP9 C;  1IW7 A;  4A3M C;  3I4M C;  2E2I K;  3GTQ K;  3RZD K;  2E2H K;  1TWG K;  2E2I C;  3GTQ C; 
#chains in the Genus database with same CATH topology
 3RZD C;  2E2H C;  5HQH A;  2YU9 C;  1O2B A;  4GTF A;  4A3I C;  2JA5 A;  5M5Y K;  1VGX A;  4QIW L;  5C4J K;  3S16 K;  2D6F C;  4IOC S;  4WJ3 M;  5IYB K;  2JA5 K;  3AH5 A;  3WOD A;  4BY7 C;  2XCQ A;  1IE0 A;  1VLO A;  1V5V A;  5E68 A;  3HXA A;  4YFN A;  1F9N A;  1Y1V C;  4A93 K;  2WB1 L;  3PO2 C;  2YU9 A;  3TTG A;  3AQO A;  4A3J K;  4A3D K;  2PA8 D;  4WFB S;  4A3G K;  3HOV K;  4PAA A;  5FLM C;  5JFE A;  4AH6 A;  4LOW A;  2V6T A;  1TWF A;  5M3M K;  4Y52 C;  3HOW C;  5C3E K;  4IOA S;  4C2M K;  1TWF K;  1PJ6 A;  1FEU A;  2GSO A;  4XCH A;  4XSX A;  1AB4 A;  2NVT K;  4GTL A;  2NVY C;  3CQZ C;  4AYB L;  3GEI A;  1TWA C;  3HOX C;  1ZBS A;  5IYD K;  1ISE A;  4RMF A;  3S1M C;  3S2D C;  3S17 K;  3S2H C;  4A3F C;  3K7A C;  4C3I K;  4A3E C;  1I50 C;  1DCO A;  4P5A A;  3RZO C;  3AD9 C;  4BBR C;  4OIR A;  3GTO A;  3S14 K;  4ZH4 A;  4A3C K;  4OIN A;  3GTP C;  1R9T C;  5CJ9 A;  4C3J C;  3A8K A;  3H3V L;  3BP8 C;  3GTG A;  3ORE A;  4A3K C;  1IS1 A;  4QJV B;  1C0A A;  1WSR A;  1JQW A;  1SMY A;  2A6H A;  4LK0 A;  1K83 A;  2Y3P A;  2ZJR S;  5M5W K;  1WIH A;  3GTG K;  1I6V A;  1VRQ C;  5FJ8 K;  3S1N K;  3I4N C;  1K83 K;  2JH3 A;  3JST A;  2ZFZ A;  3DXJ A;  3IPJ A;  3PIP S;  3HOU K;  1TWH C;  4WFA S;  2KWA A;  1EK8 A;  5TMF A;  1TWG A;  2Y0S L;  4X6A C;  4GFQ A;  4KM9 A;  4A3M C;  3TFH A;  3I4M C;  4DDQ A;  1TWG K;  1J98 A;  1WCM A;  5CHP A;  1J6W A;  4A3L K;  4XLN A;  4G0U A;  3OPF A;  5DM7 S;  1WCM K;  2PMZ L;  4C45 A;  2V6U A;  5C4J C;  3S16 C;  2A6E A;  4BY1 K;  5IYB C;  2JA5 C;  1WQF A;  4NOI A;  4QJV A;  4KAW X;  3T02 A;  1INN A;  2L5N A;  1WOR A;  1DCP A;  4A93 C;  3GTL A;  4ILD A;  3LYW A;  4C3H K;  4A3J C;  3HOZ K;  1IQ0 A;  4A3D C;  3S15 K;  3ADA C;  3GTL K;  4KAS A;  4A3G C;  1WOO A;  3HOV C;  3HOY K;  4M1X A;  4LQY A;  2R92 A;  1WQH A;  5HL7 S;  2WAQ L;  2WB1 D;  2XCO A;  2CFA A;  3GTJ A;  2V6S A;  2FQT A;  4Y7N K;  4LJZ A;  3BUE A;  2R92 K;  5C3E C;  2RGR A;  4C2M C;  1TWF C;  4Q5S A;  4WIL A;  2JA6 A;  3GTJ K;  3M3Y K;  2NVT C;  3S0X A;  2GSU A;  3HKZ L;  2JA6 K;  1JOE A;  5IYD C;  3N0C A;  5IOT A;  2R93 A;  4MEY A;  3S17 C;  4GTA A;  5D4D A;  1I3Q A;  4WJ4 A;  4C3I C;  1G51 A;  1EFW A;  2BE5 A;  1Y1W A;  4GTB A;  1HQM A;  2E2J K;  2R93 K;  4AYB D;  3M4O K;  1I3Q K;  2R7Z A;  1Y1W K;  3PO3 K;  4J3N A;  3S14 C;  3CAG A;  5IP7 K;  4A3C C;  2NVQ K;  3TFJ A;  4G7H A;  2GAG C;  2R7Z K;  3GTO C;  3S1R K;  2PHC B;  3L4K A;  2JA8 K;  1O27 A;  4P9S A;  2P5M A;  4YFX A;  3GTG C;  1USO A;  1BGW A;  2W7V A;  3S1N C;  1K83 C;  1BS2 A;  1PJ7 A;  3H3V D;  4KMD A;  1KQ4 A;  1O2F B;  4JK1 A;  2ZUF A;  2A68 A;  3HOU C;  3CF5 S;  1O25 A;  4KN4 A;  1WOP A;  5JVO A;  3NUH A;  3N3Y A;  1VH2 A;  3T00 A;  1EQR A;  4GTC A;  5EGE A;  1BJT A;  3Q3Q A;  2JA7 A;  1TWG C;  4A3L C;  5C44 K;  3GTM K;  4BXX K;  1O29 A;  4LLG A;  4BBS K;  2JA7 K;  4A3B K;  1WCM C;  2Y0S D;  4G0V A;  3G4A A;  1WSV A;  1USM A;  4BY1 C;  3FKI A;  1F93 A;  5C4X K;  4G0W A;  4KMH A;  1O26 A;  3FKI K;  5L46 A;  2VUM A;  4OIQ A;  1ZXO A;  4C3H C;  4WF9 S;  3HOZ C;  5JVH S;  4XSZ A;  2VUM K;  3S15 C;  1WOS A;  3GTL C;  3H0G A;  2O5I A;  4KMU A;  2B63 A;  1F7V A;  3HOY C;  4MEX A;  3SZZ A;  5IYC K;  3H0G K;  4GT9 A;  1RU0 A;  2B63 K;  2ZJQ S;  1SFO A;  1TWC A;  4Y7N C;  5IOQ A;  2R92 C;  3GTJ C;  2CW0 A;  1SFO K;  1TWC K;  3VA7 A;  3M3Y C;  2PPB A;  4QIW D;  2JA6 C;  1I6H K;  1IBA A;  2NVX A;  4KM8 A;  4GZY A;  2L3U A;  3GTK A;  4U67 S;  2P8T A;  4KMA A;  1HI9 A;  2NVX K;  2ZUE A;  4IO9 S;  3GTK K;  4BLB A;  4KAT A;  3DLL S;  3S1Q K;  4LR2 A;  2E2J C;  2R93 C;  1ZYR A;  3M4O C;  1I3Q C;  3FOE A;  1ZQ1 C;  3QX3 A;  1Y1W C;  3GEE A;  3PO3 C;  5IP7 C;  2NVQ C;  4KDD A;  1J6V A;  1O2A A;  2R7Z C;  3S1R C;  2JA8 C;  1XXC A;  1XZQ B;  4OIO A;  1VJE A;  4OIP A;  1X31 C;  3AD8 C;  1O24 A;  3AQP A;  1O28 A;  3N0B A;  2ZJP S;  1GE9 A;  4MQ9 A;  2E2I A;  3GDZ A;  3GTQ A;  2E2H A;  3FHZ A;  5IP9 K;  1EH1 A;  4LK1 A;  4WCE S;  4O2D A;  1PJ5 A;  3G4C A;  2E2I K;  3GTQ K;  3RZD K;  2E2H K;  2RH6 A;  2YU9 K;  3T01 A;  4A3I K;  2XCR B;  3L4J A;  5TMC A;  3ERE D;  5IOS A;  4FZB A;  5C44 C;  3A8J A;  3GTM C;  1Y1V A;  4BXX C;  2PA8 L;  4FM9 A;  2EBB A;  4BBS C;  4BY7 K;  2JA7 C;  4A3B C;  4GTE A;  4BLA A;  5IOR A;  5TJ3 A;  1B4A A;  1XXA A;  1Y1V K;  1YNN A;  5HL8 A;  3V4G A;  3LAP A;  3PO2 K;  3A8I A;  4Q4Z A;  5C4X C;  3SZY A;  4KAR A;  5M3F K;  4YFK A;  1WQG A;  1XZP B;  3FOF A;  1XZQ A;  4XLP A;  2A69 A;  2GSN A;  4KC6 A;  3FKI C;  3GTM A;  5FLM K;  3BP3 A;  1XXB A;  1B4B A;  5M5X K;  1EI6 A;  4Y52 K;  2VUM C;  3OEP A;  3HOW K;  2NVY A;  3CQZ A;  1TWA A;  5IYC C;  3H0G C;  4GTD A;  2B63 C;  3AD7 C;  4PAB A;  2NVY K;  3CQZ K;  5EGH A;  3GTO K;  1TWA K;  3HOX K;  4KB2 A;  1I50 A;  2PMZ D;  1SFO C;  4KN7 A;  1TWC C;  3S1M K;  3S2D K;  3S2H K;  1DCH A;  4A3F K;  1I6H C;  3GIR A;  3K7A K;  4KB4 A;  4A3E K;  1I50 K;  3LAJ A;  4YG2 A;  3RZO K;  3GTP A;  3MML B;  2KQ1 A;  1R9T A;  2NVX C;  4BBR K;  1YX2 A;  1XPP A;  4P5B A;  3PIO S;  3GTK C;  4BKW A;  5JVG S;  3S1Q C;  1XZP A;  3GTP K;  1L0W A;  2CFA B;  1R9T K;  1YNJ A;  4C3J K;  1IL2 A;  2O5J A;  2GAH C;  4A3K K;  1DD5 A;  2FQO A;  3TFI A;  1JVI A;  2WAQ D;  3GSI A;  1UV7 A;  3GEH A;  3LPX A;  4G7O A;  3I4N K;  3EQL A;  1TWH A;  1J6X A;  1YCL A;  2KXY A;  4G7Z A;  1ZVU A;  2KPU A;  1TWH K;  1BDF A;  3HKZ D;  4X6A K;  4WFN S;  1F7U A;  5DM6 S;  4A3M K;  3I4M K;  5IP9 C;  1IW7 A;  2E2I C;  3GTQ C; 
#chains in the Genus database with same CATH homology
 4A3I K;  3RZD C;  2E2H C;  4A3L K;  1TWG C;  4XLN A;  2YU9 C;  4A3I C;  4A3L C;  5C44 K;  5TMC A;  5M5Y K;  3GTM K;  4BXX K;  2PMZ L;  5C44 C;  4LLG A;  1WCM K;  4QIW L;  5C4J K;  3S16 K;  4BBS K;  3GTM C;  4BXX C;  2PA8 L;  1WCM C;  2JA7 K;  4A3B K;  5C4J C;  3S16 C;  2Y0S D;  4BBS C;  5IYB K;  2JA5 K;  2A6E A;  4BY7 K;  2JA7 C;  4A3B C;  3WOD A;  4BY1 K;  5IYB C;  4BY7 C;  2JA5 C;  4NOI A;  4BY1 C;  1Y1V K;  1YNN A;  4QJV A;  4YFN A;  3PO2 K;  5C4X K;  1Y1V C;  4A93 K;  2WB1 L;  3PO2 C;  4Q4Z A;  5C4X C;  4A93 C;  5M3F K;  4YFK A;  3FKI K;  4A3J K;  4XLP A;  2A69 A;  4C3H K;  4A3D K;  3FKI C;  4OIQ A;  4A3J C;  3HOZ K;  2PA8 D;  4C3H C;  4A3D C;  5FLM K;  4A3G K;  3S15 K;  3HOZ C;  3HOV K;  3GTL K;  5FLM C;  4XSZ A;  4A3G C;  3S15 C;  2VUM K;  3HOV C;  5M5X K;  3GTL C;  3HOY K;  2O5I A;  4KMU A;  4Y52 K;  2VUM C;  2YU9 K;  5M3M K;  3HOY C;  4Y52 C;  2WAQ L;  2WB1 D;  4MEX A;  3HOW K;  5IYC K;  3H0G K;  3HOW C;  5C3E K;  4Y7N K;  4C2M K;  1TWF K;  2B63 K;  4LJZ A;  5IYC C;  3H0G C;  2R92 K;  5C3E C;  4Y7N C;  4C2M C;  1TWF C;  2B63 C;  4Q5S A;  4XSX A;  2R92 C;  2NVY K;  3CQZ K;  2NVT K;  3GTJ K;  3GTO K;  1TWA K;  2NVY C;  3CQZ C;  3HOX K;  2NVT C;  3GTJ C;  2CW0 A;  1SFO K;  4AYB L;  3M3Y K;  1TWC K;  1TWA C;  3HKZ L;  3HOX C;  3M3Y C;  2JA6 K;  2PMZ D;  1SFO C;  2PPB A;  4QIW D;  4KN7 A;  1TWC C;  2JA6 C;  5IYD K;  3S1M K;  1I6H K;  3S2D K;  3S2H K;  5IYD C;  3S1M C;  4GZY A;  1I6H C;  3S2D C;  4A3F K;  3K7A K;  3S17 K;  3S2H C;  1I50 K;  4A3F C;  4A3E K;  4MEY A;  3S17 C;  3K7A C;  4YG2 A;  5D4D A;  4C3I K;  4A3E C;  1I50 C;  2NVX K;  3RZO K;  4C3I C;  2NVX C;  2BE5 A;  3GTK K;  4BBR K;  3RZO C;  1XPP A;  1HQM A;  2E2J K;  3S1Q K;  2R93 K;  3GTK C;  4AYB D;  4BBR C;  4OIR A;  3M4O K;  3S1Q C;  2E2J C;  2R93 C;  1I3Q K;  3GTP K;  1ZYR A;  3M4O C;  3S14 K;  4ZH4 A;  1Y1W K;  1YNJ A;  1I3Q C;  4OIN A;  3GTP C;  4C3J K;  1R9T K;  3PO3 K;  4A3C K;  3S14 C;  1R9T C;  1Y1W C;  4A3C C;  4C3J C;  2O5J A;  5IP7 K;  4A3K K;  2NVQ K;  3PO3 C;  3H3V L;  4G7H A;  5IP7 C;  4QJV B;  4A3K C;  2NVQ C;  2R7Z K;  3GTO C;  3S1R K;  2R7Z C;  1SMY A;  2A6H A;  4LK0 A;  2JA8 K;  3S1R C;  2WAQ D;  5M5W K;  3GTG K;  2JA8 C;  4G7O A;  1I6V A;  5FJ8 K;  3I4N K;  4OIO A;  4YFX A;  3EQL A;  3GTG C;  3S1N K;  4OIP A;  3I4N C;  1K83 K;  3S1N C;  1K83 C;  3DXJ A;  4G7Z A;  3H3V D;  1TWH K;  1BDF A;  4MQ9 A;  3HOU K;  1TWH C;  3HKZ D;  4JK1 A;  2A68 A;  4X6A K;  5IP9 K;  5TMF A;  3HOU C;  2Y0S L;  4LK1 A;  4KN4 A;  4X6A C;  4A3M K;  3I4M K;  5IP9 C;  1IW7 A;  4A3M C;  3I4M C;  2E2I K;  3GTQ K;  3RZD K;  2E2H K;  1TWG K;  2E2I C;  3GTQ C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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