2YU9C

Rna polymerase ii elongation complex in 150 mm mg+2 with utp
Total Genus 40
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
40
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural Basis of Transcription: Role of the Trigger Loop in Substrate Specificity and Catalysis
pubmed doi rcsb
molecule tags Transcription,transferase/dna-rna hybrid
molecule keywords 5'-R(*AP*UP*CP*GP*AP*GP*AP*GP*GP*A)-3'
total genus 40
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2007-04-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 2yu9C02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 2yu9C01
4Y7NK 5TMCA 4GZYA 1Y1VK 2WAQD 4BBRC 4A3EC 4A3FC 5D4DA 2WB1L 2JA8K 3H3VD 4OIPA 2JA6C 2JA7K 4KMUA 3HOVC 4A3KK 5IP9C 2PMZL 4Y7NC 1TWFC 4LJZA 1R9TK 3S2DC 4BBSC 3S14K 4C3HK 4BY7C 5IYCC 2E2JK 5M3MK 2B63K 5IYCK 4QJVA 3H0GK 4AYBD 3I4NK 5M5XK 2NVYK 4C2MK 2E2IC 4A3MK 4A3BC 3WODA 4A3IK 3S17K 3CQZC 1YNJA 1TWFK 2NVXC 3HOUK 4X6AK 3S1QC 2O5JA 3S2DK 4BBSK 3HOZC 5IYBC 3RZOC 1I3QC 4A3LC 5C4XK 2PA8D 4LK0A 3HOUC 2NVXK 4NOIA 3HKZL 1TWCC 2R92K 3GTPK 1TWGK 3S15K 1WCMK 2Y0SL 3GTKK 3HOZK 3M4OK 4A3GK 5FLMK 3S2HK 4C3IK 3HOXC 3S14C 4XSXA 2VUMC 2E2HK 4A3CK 4QJVB 1Y1WC 1TWAK 4A3BK 5C44C 3M4OC 5FLMC 5C44K 4YG2A 5C3EK 5IYDK 3S16C 4BY1K 2Y0SD 4MQ9A 4A3JC 2JA5C 3GTMC 3H3VL 2YU9K 4C3IC 3GTOK 3RZOK 4Y52K 2PMZD 5C4JC 3I4NC 4KN4A 4A3FK 3GTGC 1Y1VC 4YFKA 2A6HA 4Q4ZA 1TWCK 5IP7C 3GTJK 3I4MK 2CW0A 2YU9C 3GTJC 5IP7K 2NVTC 3GTLC 1K83C 4BY1C 5IYBK 3S16K 3H0GC 3HOWC 2NVQC 2NVYC 4C2MC 4C3HC 4G7ZA 1TWAC 1Y1WK 1I6HK 3PO3C 4G7OA 3S17C 2R93K 3I4MC 3S1NC 4MEYA 4A3KC 4X6AC 3EQLA 2R93C 2E2IK 3HOVK 4QIWL 2R7ZC 4OIOA 2E2JC 3S2HC 4BY7K 5FJ8K 2NVTK 4OINA 4C3JC 4BXXC 4QIWD 4BXXK 2A6EA 1I50C 4JK1A 1ZYRA 2JA7C 3S1RK 4A3LK 2A68A 5TMFA 4A93C 2JA6K 4Q5SA 1HQMA 4ZH4A 5IYDC 2R92C 3S15C 4A3JK 3FKIK 1SFOK 2E2HC 2WB1D 3FKIC 3GTQK 4OIQA 2PA8L 4C3JK 2NVQK 1I6VA 4A3IC 1I3QK 1I6HC 1TWHC 4A93K 1TWGC 3HKZD 1BDFA 2O5IA 4KN7A 4XLPA 1TWHK 4MEXA 1SFOC 3PO2K 3S1QK 5IP9K 3HOXK 4YFNA 1YNNA 2PPBA 4AYBL 2VUMK 5C4XC 3M3YK 3HOWK 5C4JK 1SMYA 3DXJA 4BBRK 3GTOC 4A3EK 3S1RC 4LK1A 2JA8C 3GTPC 4Y52C 4A3GC 4OIRA 1I50K 3RZDK 3PO2C 4A3DC 4A3DK 4YFXA 3RZDC 2A69A 1R9TC 3M3YC 4XLNA 2JA5K 3GTMK 5M3FK 2R7ZK 1XPPA 3K7AK 2WAQL 3GTLK 3GTQC 5M5WK 2BE5A 4A3CC 3PO3K 5M5YK 3S1MK 4XSZA 4A3MC 3S1NK 4LLGA 3S1MC 3CQZK 5C3EC 3GTGK 3HOYC 3K7AC 1WCMC 3GTKC 1K83K 1IW7A 3HOYK 4G7HA 2B63C
chains in the Genus database with same CATH superfamily
5TMCA 1TWHA 2KQ1A 1Y1VK 4BBRC 3GTLA 4OIPA 2JA7K 4A3KK 5IP9C 1DCPA 4C45A 4BY7C 5IYCC 5M3MK 3H0GK 4AYBD 4WFNS 3FOFA 4A3IK 3S17K 3HOUK 1L0WA 3S2DK 1EI6A 2ZFZA 1EQRA 3HOZC 5IYBC 3FHZA 1I3QC 4LK0A 1ZBSA 1TWGK 1XZPA 5DM6S 5FLMK 4C3IK 4P5AA 3S14C 2VUMC 5IOSA 1TWAK 5IOQA 1I50A 4A3BK 5C44C 1ZXOA 4YG2A 5HL8A 4A3JC 5TJ3A 3H3VL 1X31C 4C3IC 4LQYA 3RZOK 4Y52K 5JVHS 4A3FK 3FKIA 2KPUA 1Y1VC 3GTGC 2A6HA 1EK8A 2NVTC 3CF5S 3GTLC 3BUEA 3AQOA 4BLBA 4G7OA 2FQTA 4G0UA 4MEYA 4A3KC 4X6AC 3EQLA 2R93C 3LPXA 3PIOS 1IS1A 2JA7A 1VRQC 4GT9A 2R7ZC 4OIOA 4BY7K 5FJ8K 2NVTK 2P8TA 1IE0A 4BXXK 5JFEA 4JK1A 3N0CA 4O2DA 3G4CA 3T02A 2JA6K 4Q5SA 4ZH4A 1JOEA 1XXAA 3PIPS 1XXCA 1UV7A 3BP3A 2E2HC 1J98A 3FKIC 4BLAA 4XCHA 2NVQK 1I6VA 1I6HC 1TWGC 2GAHC 2JA5A 4XLPA 2XCRB 1TWGA 2PPBA 2VUMK 5C4XC 1WORA 3HOWK 1C0AA 1SMYA 4BBRK 3GDZA 3S1RC 5IOTA 3GTPC 4Y52C 4A3GC 3RZDK 3PO2C 1KQ4A 4GTCA 4KB2A 4KMAA 3K7AK 1O29A 3GTLK 4GTAA 3CAGA 3L4KA 4A3CC 5M5YK 3S1MK 3N0BA 1IW7A 3HOYK 1I3QA 1IBAA 2D6FC 4BKWA 2B63C 1WOPA 2CFAA 4GZYA 4GTBA 1RU0A 5D4DA 2WB1L 3A8IA 2L5NA 1USMA 3HOVC 1R9TK 1BS2A 2PMZL 4Y7NC 3GTGA 1B4AA 4BBSC 3S14K 1K83A 2B63K 4QJVA 2KWAA 4WILA 2R92A 4A3BC 3WODA 3CQZC 3GEIA 4GTLA 1TWFK 2NVXC 3A8JA 4GTFA 2O5JA 4KASA 5DM7S 4GTDA 3RZOC 4A3LC 5C4XK 1DD5A 2PA8D 5HL7S 3H0GA 4NOIA 3A8KA 3GTPK 4A3GK 1WCMK 2Y0SL 3OREA 5CJ9A 3M4OK 3S2HK 1J6VA 1O27A 4QJVB 3GTJA 5E68A 1WOSA 5C44K 1WIHA 3S16C 1ZVUA 4BY1K 2ZUEA 1V5VA 2YU9K 5EGHA 3S0XA 4KM8A 5C4JC 3LYWA 3CQZA 1VH2A 4Q4ZA 3I4MK 5EGEA 3GSIA 4BY1C 3ERED 4PAAA 3S16K 4DDQA 3H0GC 2NVQC 4AH6A 1I6HK 4KAWX 3PO3C 3GTOA 3S17C 3S1NC 1EH1A 3HOVK 4QIWL 4KM9A 2W7VA 4LOWA 1FEUA 4IOAS 3S1RK 1O28A 4A3LK 3AQPA 4A93C 1F93A 2RGRA 1EFWA 2WB1D 3BP8C 1PJ5A 1TWHC 3HKZD 1BDFA 3GTMA 4KN7A 3T01A 1SFOC 3S1QK 5IP9K 4YFNA 1YNNA 2KXYA 3LAJA 3QX3A 4WCES 1I50K 4KMDA 2V6TA 3M3YC 3RZDC 2A69A 1R9TC 3ADAC 5L46A 1G51A 5M5WK 2JA6A 2ZJRS 4XSZA 1BJTA 4GFQA 3S1MC 3CQZK 1VJEA 4G7HA 1ISEA 3I4NC 2NVYA 3SZZA 4RMFA 2WAQD 4WJ3M 2JA8K 3H3VD 1WQFA 2JA6C 1F9NA 3SZYA 3S2DC 4C3HK 5HQHA 3GIRA 3I4NK 2ZJQS 5M5XK 1PJ6A 2JH3A 2NVYK 4C2MK 2E2IC 1Y1VA 1O2AA 1JVIA 3TFJA 1SFOA 1HI9A 1XXBA 3V4GA 1WQHA 3OEPA 3HOUC 1J6XA 2R92K 5IYDK 3GTKK 3HOZK 4IOCS 3GEEA 2VUMA 4XSXA 4A3CK 1YX2A 1R9TA 4WFBS 4KATA 3NUHA 3AD9C 5FLMC 3HXAA 4FM9A 2Y0SD 2GSNA 3GTMC 3GTKA 2EBBA 4WFAS 1VGXA 3GEHA 2L3UA 4YFKA 1DCOA 3Q3QA 3GTQA 1TWCK 5IP7C 3GTJK 2GSOA 4ILDA 5IORA 3FOEA 1K83C 5IYBK 3HOWC 4C3HC 1PJ7A 1Y1WK 2E2IK 3IPJA 4KC6A 2GSUA 4OINA 4QIWD 1DCHA 2A6EA 1I50C 4J3NA 1F7VA 4WJ4A 1BGWA 1HQMA 5IYDC 2R92C 4A3JK 4KMHA 2PA8L 3JSTA 1TWHK 3VA7A 4KDDA 3PO2K 1AB4A 1J6WA 4AYBL 1WSRA 1IQ0A 1WSVA 5C4JK 2JA8C 4A3DK 4PABA 1GE9A 3TTGA 4XLNA 3GTMK 2R7ZK 3DLLS 1XZQB 2WAQL 3GTQC 2BE5A 3PO3K 3S1NK 4LLGA 4G0WA 5C3EC 4GTEA 3K7AC 1WCMC 1K83K 2B63A 2CFAB 1F7UA 4Y7NK 2P5MA 2R7ZA 4A3EC 4A3FC 2R93A 1YCLA 4KMUA 2E2IA 1TWAA 4P5BA 1B4BA 1TWFC 4LJZA 1O24A 2E2JK 3GTPA 3LAPA 4A3MK 2V6UA 1YNJA 4X6AK 3S1QC 4BBSK 3AH5A 3N3YA 1WOOA 2NVXK 1O26A 3HKZL 1TWCC 3S15K 2YU9A 1TWFA 3HOXC 5CHPA 2XCOA 2E2HK 5JVGS 1Y1WC 3AD7C 3M4OC 1WQGA 5C3EK 4MQ9A 2JA5C 3TFIA 1ZQ1C 1WCMA 2PHCB 1O2BA 3GTOK 4KARA 2PMZD 4KN4A 3T00A 2ZJPS 3TFHA 3MMLB 2CW0A 2YU9C 3GTJC 1XZPB 5IP7K 4LR2A 1JQWA 5JVOA 3AD8C 2Y3PA 4WF9S 2FQOA 1USOA 2NVYC 4C2MC 4G7ZA 1TWAC 2R93K 3I4MC 1VLOA 3S2HC 2E2JC 4C3JC 4BXXC 1ZYRA 2JA7C 3L4JA 1Y1WA 2A68A 5TMFA 4U67S 4M1XA 4IO9S 4FZBA 3S15C 3G4AA 2V6SA 2ZUFA 3FKIK 1SFOK 3GTQK 4OIQA 1TWCA 2XCQA 4C3JK 4A3IC 1I3QK 4A93K 2O5IA 4MEXA 3HOXK 3M3YK 1O25A 2E2HA 4A3EK 3DXJA 3GTOC 4LK1A 4OIRA 1O2FB 4A3DC 1IL2A 4YFXA 2JA5K 5M3FK 4G0VA 1XPPA 2GAGC 3OPFA 1XZQA 4P9SA 1INNA 4A3MC 2RH6A 3GTGK 3HOYC 3GTKC 4KB4A 2NVXA 5IYCK
chains in the Genus database with same CATH topology
4Y7NK 5TMCA 4GZYA 1Y1VK 2WAQD 4BBRC 4A3EC 4A3FC 5D4DA 2WB1L 2JA8K 3H3VD 4OIPA 2JA6C 2JA7K 4KMUA 3HOVC 4A3KK 5IP9C 2PMZL 4Y7NC 1TWFC 4LJZA 1R9TK 3S2DC 4BBSC 3S14K 4C3HK 4BY7C 5IYCC 2E2JK 5M3MK 2B63K 5IYCK 4QJVA 3H0GK 4AYBD 3I4NK 5M5XK 2NVYK 4C2MK 2E2IC 4A3MK 4A3BC 3WODA 4A3IK 3S17K 3CQZC 1YNJA 1TWFK 2NVXC 3HOUK 4X6AK 3S1QC 2O5JA 3S2DK 4BBSK 3HOZC 5IYBC 3RZOC 1I3QC 4A3LC 5C4XK 2PA8D 4LK0A 3HOUC 2NVXK 4NOIA 3HKZL 1TWCC 2R92K 3GTPK 1TWGK 3S15K 1WCMK 2Y0SL 3GTKK 3HOZK 3M4OK 4A3GK 5FLMK 3S2HK 4C3IK 3HOXC 3S14C 4XSXA 2VUMC 2E2HK 4A3CK 4QJVB 1Y1WC 1TWAK 4A3BK 5C44C 3M4OC 5FLMC 5C44K 4YG2A 5C3EK 5IYDK 3S16C 4BY1K 2Y0SD 4MQ9A 4A3JC 2JA5C 3GTMC 3H3VL 2YU9K 4C3IC 3GTOK 3RZOK 4Y52K 2PMZD 5C4JC 3I4NC 4KN4A 4A3FK 3GTGC 1Y1VC 4YFKA 2A6HA 4Q4ZA 1TWCK 5IP7C 3GTJK 3I4MK 2CW0A 2YU9C 3GTJC 5IP7K 2NVTC 3GTLC 1K83C 4BY1C 5IYBK 3S16K 3H0GC 3HOWC 2NVQC 2NVYC 4C2MC 4C3HC 4G7ZA 1TWAC 1Y1WK 1I6HK 3PO3C 4G7OA 3S17C 2R93K 3I4MC 3S1NC 4MEYA 4A3KC 4X6AC 3EQLA 2R93C 2E2IK 3HOVK 4QIWL 2R7ZC 4OIOA 2E2JC 3S2HC 4BY7K 5FJ8K 2NVTK 4OINA 4C3JC 4BXXC 4QIWD 4BXXK 2A6EA 1I50C 4JK1A 1ZYRA 2JA7C 3S1RK 4A3LK 2A68A 5TMFA 4A93C 2JA6K 4Q5SA 1HQMA 4ZH4A 5IYDC 2R92C 3S15C 4A3JK 3FKIK 1SFOK 2E2HC 2WB1D 3FKIC 3GTQK 4OIQA 2PA8L 4C3JK 2NVQK 1I6VA 4A3IC 1I3QK 1I6HC 1TWHC 4A93K 1TWGC 3HKZD 1BDFA 2O5IA 4KN7A 4XLPA 1TWHK 4MEXA 1SFOC 3PO2K 3S1QK 5IP9K 3HOXK 4YFNA 1YNNA 2PPBA 4AYBL 2VUMK 5C4XC 3M3YK 3HOWK 5C4JK 1SMYA 3DXJA 4BBRK 3GTOC 4A3EK 3S1RC 4LK1A 2JA8C 3GTPC 4Y52C 4A3GC 4OIRA 1I50K 3RZDK 3PO2C 4A3DC 4A3DK 4YFXA 3RZDC 2A69A 1R9TC 3M3YC 4XLNA 2JA5K 3GTMK 5M3FK 2R7ZK 1XPPA 3K7AK 2WAQL 3GTLK 3GTQC 5M5WK 2BE5A 4A3CC 3PO3K 5M5YK 3S1MK 4XSZA 4A3MC 3S1NK 4LLGA 3S1MC 3CQZK 5C3EC 3GTGK 3HOYC 3K7AC 1WCMC 3GTKC 1K83K 1IW7A 3HOYK 4G7HA 2B63C
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4Y7N K;  5TMC A;  4GZY A;  1Y1V K;  2WAQ D;  4BBR C;  4A3E C;  4A3F C;  5D4D A;  2WB1 L;  2JA8 K;  3H3V D;  4OIP A;  2JA6 C;  2JA7 K;  4KMU A;  3HOV C;  4A3K K;  5IP9 C;  2PMZ L;  4Y7N C;  1TWF C;  4LJZ A;  1R9T K;  3S2D C;  4BBS C;  3S14 K;  4C3H K;  4BY7 C;  5IYC C;  2E2J K;  5M3M K;  2B63 K;  5IYC K;  4QJV A;  3H0G K;  4AYB D;  3I4N K;  5M5X K;  2NVY K;  4C2M K;  2E2I C;  4A3M K;  4A3B C;  3WOD A;  4A3I K;  3S17 K;  3CQZ C;  1YNJ A;  1TWF K;  2NVX C;  3HOU K;  4X6A K;  3S1Q C;  2O5J A;  3S2D K;  4BBS K;  3HOZ C;  5IYB C;  3RZO C;  1I3Q C;  4A3L C;  5C4X K;  2PA8 D;  4LK0 A;  3HOU C;  2NVX K;  4NOI A;  3HKZ L;  1TWC C;  2R92 K;  3GTP K;  1TWG K;  3S15 K;  1WCM K;  2Y0S L;  3GTK K;  3HOZ K;  3M4O K;  4A3G K;  5FLM K;  3S2H K;  4C3I K;  3HOX C;  3S14 C;  4XSX A;  2VUM C;  2E2H K;  4A3C K;  4QJV B;  1Y1W C;  1TWA K;  4A3B K;  5C44 C;  3M4O C;  5FLM C;  5C44 K;  4YG2 A;  5C3E K;  5IYD K;  3S16 C;  4BY1 K;  2Y0S D;  4MQ9 A;  4A3J C;  2JA5 C;  3GTM C;  3H3V L;  2YU9 K;  4C3I C;  3GTO K;  3RZO K;  4Y52 K;  2PMZ D;  5C4J C;  3I4N C;  4KN4 A;  4A3F K;  3GTG C;  1Y1V C;  4YFK A;  2A6H A;  4Q4Z A;  1TWC K;  5IP7 C;  3GTJ K;  3I4M K;  2CW0 A;  2YU9 C;  3GTJ C;  5IP7 K;  2NVT C;  3GTL C;  1K83 C;  4BY1 C;  5IYB K;  3S16 K;  3H0G C;  3HOW C;  2NVQ C;  2NVY C;  4C2M C;  4C3H C;  4G7Z A;  1TWA C;  1Y1W K;  1I6H K;  3PO3 C;  4G7O A;  3S17 C;  2R93 K;  3I4M C;  3S1N C;  4MEY A;  4A3K C;  4X6A C;  3EQL A;  2R93 C;  2E2I K;  3HOV K;  4QIW L;  2R7Z C;  4OIO A;  2E2J C;  3S2H C;  4BY7 K;  5FJ8 K;  2NVT K;  4OIN A;  4C3J C;  4BXX C;  4QIW D;  4BXX K;  2A6E A;  1I50 C;  4JK1 A;  1ZYR A;  2JA7 C;  3S1R K;  4A3L K;  2A68 A;  5TMF A;  4A93 C;  2JA6 K;  4Q5S A;  1HQM A;  4ZH4 A;  5IYD C;  2R92 C;  3S15 C;  4A3J K;  3FKI K;  1SFO K;  2E2H C;  2WB1 D;  3FKI C;  3GTQ K;  4OIQ A;  2PA8 L;  4C3J K;  2NVQ K;  1I6V A;  4A3I C;  1I3Q K;  1I6H C;  1TWH C;  4A93 K;  1TWG C;  3HKZ D;  1BDF A;  2O5I A;  4KN7 A;  4XLP A;  1TWH K;  4MEX A;  1SFO C;  3PO2 K;  3S1Q K;  5IP9 K;  3HOX K;  4YFN A;  1YNN A;  2PPB A;  4AYB L;  2VUM K;  5C4X C;  3M3Y K;  3HOW K;  5C4J K;  1SMY A;  3DXJ A;  4BBR K;  3GTO C;  4A3E K;  3S1R C;  4LK1 A;  2JA8 C;  3GTP C;  4Y52 C;  4A3G C;  4OIR A;  1I50 K;  3RZD K;  3PO2 C;  4A3D C;  4A3D K;  4YFX A;  3RZD C;  2A69 A;  1R9T C;  3M3Y C;  4XLN A;  2JA5 K;  3GTM K;  5M3F K;  2R7Z K;  1XPP A;  3K7A K;  2WAQ L;  3GTL K;  3GTQ C;  5M5W K;  2BE5 A;  4A3C C;  3PO3 K;  5M5Y K;  3S1M K;  4XSZ A;  4A3M C;  3S1N K;  4LLG A;  3S1M C;  3CQZ K;  5C3E C;  3GTG K;  3HOY C;  3K7A C;  1WCM C;  3GTK C;  1K83 K;  1IW7 A;  3HOY K;  4G7H A;  2B63 C; 
#chains in the Genus database with same CATH topology
 5TMC A;  1TWH A;  2KQ1 A;  1Y1V K;  4BBR C;  3GTL A;  4OIP A;  2JA7 K;  4A3K K;  5IP9 C;  1DCP A;  4C45 A;  4BY7 C;  5IYC C;  5M3M K;  3H0G K;  4AYB D;  4WFN S;  3FOF A;  4A3I K;  3S17 K;  3HOU K;  1L0W A;  3S2D K;  1EI6 A;  2ZFZ A;  1EQR A;  3HOZ C;  5IYB C;  3FHZ A;  1I3Q C;  4LK0 A;  1ZBS A;  1TWG K;  1XZP A;  5DM6 S;  5FLM K;  4C3I K;  4P5A A;  3S14 C;  2VUM C;  5IOS A;  1TWA K;  5IOQ A;  1I50 A;  4A3B K;  5C44 C;  1ZXO A;  4YG2 A;  5HL8 A;  4A3J C;  5TJ3 A;  3H3V L;  1X31 C;  4C3I C;  4LQY A;  3RZO K;  4Y52 K;  5JVH S;  4A3F K;  3FKI A;  2KPU A;  1Y1V C;  3GTG C;  2A6H A;  1EK8 A;  2NVT C;  3CF5 S;  3GTL C;  3BUE A;  3AQO A;  4BLB A;  4G7O A;  2FQT A;  4G0U A;  4MEY A;  4A3K C;  4X6A C;  3EQL A;  2R93 C;  3LPX A;  3PIO S;  1IS1 A;  2JA7 A;  1VRQ C;  4GT9 A;  2R7Z C;  4OIO A;  4BY7 K;  5FJ8 K;  2NVT K;  2P8T A;  1IE0 A;  4BXX K;  5JFE A;  4JK1 A;  3N0C A;  4O2D A;  3G4C A;  3T02 A;  2JA6 K;  4Q5S A;  4ZH4 A;  1JOE A;  1XXA A;  3PIP S;  1XXC A;  1UV7 A;  3BP3 A;  2E2H C;  1J98 A;  3FKI C;  4BLA A;  4XCH A;  2NVQ K;  1I6V A;  1I6H C;  1TWG C;  2GAH C;  2JA5 A;  4XLP A;  2XCR B;  1TWG A;  2PPB A;  2VUM K;  5C4X C;  1WOR A;  3HOW K;  1C0A A;  1SMY A;  4BBR K;  3GDZ A;  3S1R C;  5IOT A;  3GTP C;  4Y52 C;  4A3G C;  3RZD K;  3PO2 C;  1KQ4 A;  4GTC A;  4KB2 A;  4KMA A;  3K7A K;  1O29 A;  3GTL K;  4GTA A;  3CAG A;  3L4K A;  4A3C C;  5M5Y K;  3S1M K;  3N0B A;  1IW7 A;  3HOY K;  1I3Q A;  1IBA A;  2D6F C;  4BKW A;  2B63 C;  1WOP A;  2CFA A;  4GZY A;  4GTB A;  1RU0 A;  5D4D A;  2WB1 L;  3A8I A;  2L5N A;  1USM A;  3HOV C;  1R9T K;  1BS2 A;  2PMZ L;  4Y7N C;  3GTG A;  1B4A A;  4BBS C;  3S14 K;  1K83 A;  2B63 K;  4QJV A;  2KWA A;  4WIL A;  2R92 A;  4A3B C;  3WOD A;  3CQZ C;  3GEI A;  4GTL A;  1TWF K;  2NVX C;  3A8J A;  4GTF A;  2O5J A;  4KAS A;  5DM7 S;  4GTD A;  3RZO C;  4A3L C;  5C4X K;  1DD5 A;  2PA8 D;  5HL7 S;  3H0G A;  4NOI A;  3A8K A;  3GTP K;  4A3G K;  1WCM K;  2Y0S L;  3ORE A;  5CJ9 A;  3M4O K;  3S2H K;  1J6V A;  1O27 A;  4QJV B;  3GTJ A;  5E68 A;  1WOS A;  5C44 K;  1WIH A;  3S16 C;  1ZVU A;  4BY1 K;  2ZUE A;  1V5V A;  2YU9 K;  5EGH A;  3S0X A;  4KM8 A;  5C4J C;  3LYW A;  3CQZ A;  1VH2 A;  4Q4Z A;  3I4M K;  5EGE A;  3GSI A;  4BY1 C;  3ERE D;  4PAA A;  3S16 K;  4DDQ A;  3H0G C;  2NVQ C;  4AH6 A;  1I6H K;  4KAW X;  3PO3 C;  3GTO A;  3S17 C;  3S1N C;  1EH1 A;  3HOV K;  4QIW L;  4KM9 A;  2W7V A;  4LOW A;  1FEU A;  4IOA S;  3S1R K;  1O28 A;  4A3L K;  3AQP A;  4A93 C;  1F93 A;  2RGR A;  1EFW A;  2WB1 D;  3BP8 C;  1PJ5 A;  1TWH C;  3HKZ D;  1BDF A;  3GTM A;  4KN7 A;  3T01 A;  1SFO C;  3S1Q K;  5IP9 K;  4YFN A;  1YNN A;  2KXY A;  3LAJ A;  3QX3 A;  4WCE S;  1I50 K;  4KMD A;  2V6T A;  3M3Y C;  3RZD C;  2A69 A;  1R9T C;  3ADA C;  5L46 A;  1G51 A;  5M5W K;  2JA6 A;  2ZJR S;  4XSZ A;  1BJT A;  4GFQ A;  3S1M C;  3CQZ K;  1VJE A;  4G7H A;  1ISE A;  3I4N C;  2NVY A;  3SZZ A;  4RMF A;  2WAQ D;  4WJ3 M;  2JA8 K;  3H3V D;  1WQF A;  2JA6 C;  1F9N A;  3SZY A;  3S2D C;  4C3H K;  5HQH A;  3GIR A;  3I4N K;  2ZJQ S;  5M5X K;  1PJ6 A;  2JH3 A;  2NVY K;  4C2M K;  2E2I C;  1Y1V A;  1O2A A;  1JVI A;  3TFJ A;  1SFO A;  1HI9 A;  1XXB A;  3V4G A;  1WQH A;  3OEP A;  3HOU C;  1J6X A;  2R92 K;  5IYD K;  3GTK K;  3HOZ K;  4IOC S;  3GEE A;  2VUM A;  4XSX A;  4A3C K;  1YX2 A;  1R9T A;  4WFB S;  4KAT A;  3NUH A;  3AD9 C;  5FLM C;  3HXA A;  4FM9 A;  2Y0S D;  2GSN A;  3GTM C;  3GTK A;  2EBB A;  4WFA S;  1VGX A;  3GEH A;  2L3U A;  4YFK A;  1DCO A;  3Q3Q A;  3GTQ A;  1TWC K;  5IP7 C;  3GTJ K;  2GSO A;  4ILD A;  5IOR A;  3FOE A;  1K83 C;  5IYB K;  3HOW C;  4C3H C;  1PJ7 A;  1Y1W K;  2E2I K;  3IPJ A;  4KC6 A;  2GSU A;  4OIN A;  4QIW D;  1DCH A;  2A6E A;  1I50 C;  4J3N A;  1F7V A;  4WJ4 A;  1BGW A;  1HQM A;  5IYD C;  2R92 C;  4A3J K;  4KMH A;  2PA8 L;  3JST A;  1TWH K;  3VA7 A;  4KDD A;  3PO2 K;  1AB4 A;  1J6W A;  4AYB L;  1WSR A;  1IQ0 A;  1WSV A;  5C4J K;  2JA8 C;  4A3D K;  4PAB A;  1GE9 A;  3TTG A;  4XLN A;  3GTM K;  2R7Z K;  3DLL S;  1XZQ B;  2WAQ L;  3GTQ C;  2BE5 A;  3PO3 K;  3S1N K;  4LLG A;  4G0W A;  5C3E C;  4GTE A;  3K7A C;  1WCM C;  1K83 K;  2B63 A;  2CFA B;  1F7U A;  4Y7N K;  2P5M A;  2R7Z A;  4A3E C;  4A3F C;  2R93 A;  1YCL A;  4KMU A;  2E2I A;  1TWA A;  4P5B A;  1B4B A;  1TWF C;  4LJZ A;  1O24 A;  2E2J K;  3GTP A;  3LAP A;  4A3M K;  2V6U A;  1YNJ A;  4X6A K;  3S1Q C;  4BBS K;  3AH5 A;  3N3Y A;  1WOO A;  2NVX K;  1O26 A;  3HKZ L;  1TWC C;  3S15 K;  2YU9 A;  1TWF A;  3HOX C;  5CHP A;  2XCO A;  2E2H K;  5JVG S;  1Y1W C;  3AD7 C;  3M4O C;  1WQG A;  5C3E K;  4MQ9 A;  2JA5 C;  3TFI A;  1ZQ1 C;  1WCM A;  2PHC B;  1O2B A;  3GTO K;  4KAR A;  2PMZ D;  4KN4 A;  3T00 A;  2ZJP S;  3TFH A;  3MML B;  2CW0 A;  2YU9 C;  3GTJ C;  1XZP B;  5IP7 K;  4LR2 A;  1JQW A;  5JVO A;  3AD8 C;  2Y3P A;  4WF9 S;  2FQO A;  1USO A;  2NVY C;  4C2M C;  4G7Z A;  1TWA C;  2R93 K;  3I4M C;  1VLO A;  3S2H C;  2E2J C;  4C3J C;  4BXX C;  1ZYR A;  2JA7 C;  3L4J A;  1Y1W A;  2A68 A;  5TMF A;  4U67 S;  4M1X A;  4IO9 S;  4FZB A;  3S15 C;  3G4A A;  2V6S A;  2ZUF A;  3FKI K;  1SFO K;  3GTQ K;  4OIQ A;  1TWC A;  2XCQ A;  4C3J K;  4A3I C;  1I3Q K;  4A93 K;  2O5I A;  4MEX A;  3HOX K;  3M3Y K;  1O25 A;  2E2H A;  4A3E K;  3DXJ A;  3GTO C;  4LK1 A;  4OIR A;  1O2F B;  4A3D C;  1IL2 A;  4YFX A;  2JA5 K;  5M3F K;  4G0V A;  1XPP A;  2GAG C;  3OPF A;  1XZQ A;  4P9S A;  1INN A;  4A3M C;  2RH6 A;  3GTG K;  3HOY C;  3GTK C;  4KB4 A;  2NVX A;  5IYC K; 
#chains in the Genus database with same CATH homology
 4Y7N K;  5TMC A;  4GZY A;  1Y1V K;  2WAQ D;  4BBR C;  4A3E C;  4A3F C;  5D4D A;  2WB1 L;  2JA8 K;  3H3V D;  4OIP A;  2JA6 C;  2JA7 K;  4KMU A;  3HOV C;  4A3K K;  5IP9 C;  2PMZ L;  4Y7N C;  1TWF C;  4LJZ A;  1R9T K;  3S2D C;  4BBS C;  3S14 K;  4C3H K;  4BY7 C;  5IYC C;  2E2J K;  5M3M K;  2B63 K;  5IYC K;  4QJV A;  3H0G K;  4AYB D;  3I4N K;  5M5X K;  2NVY K;  4C2M K;  2E2I C;  4A3M K;  4A3B C;  3WOD A;  4A3I K;  3S17 K;  3CQZ C;  1YNJ A;  1TWF K;  2NVX C;  3HOU K;  4X6A K;  3S1Q C;  2O5J A;  3S2D K;  4BBS K;  3HOZ C;  5IYB C;  3RZO C;  1I3Q C;  4A3L C;  5C4X K;  2PA8 D;  4LK0 A;  3HOU C;  2NVX K;  4NOI A;  3HKZ L;  1TWC C;  2R92 K;  3GTP K;  1TWG K;  3S15 K;  1WCM K;  2Y0S L;  3GTK K;  3HOZ K;  3M4O K;  4A3G K;  5FLM K;  3S2H K;  4C3I K;  3HOX C;  3S14 C;  4XSX A;  2VUM C;  2E2H K;  4A3C K;  4QJV B;  1Y1W C;  1TWA K;  4A3B K;  5C44 C;  3M4O C;  5FLM C;  5C44 K;  4YG2 A;  5C3E K;  5IYD K;  3S16 C;  4BY1 K;  2Y0S D;  4MQ9 A;  4A3J C;  2JA5 C;  3GTM C;  3H3V L;  2YU9 K;  4C3I C;  3GTO K;  3RZO K;  4Y52 K;  2PMZ D;  5C4J C;  3I4N C;  4KN4 A;  4A3F K;  3GTG C;  1Y1V C;  4YFK A;  2A6H A;  4Q4Z A;  1TWC K;  5IP7 C;  3GTJ K;  3I4M K;  2CW0 A;  2YU9 C;  3GTJ C;  5IP7 K;  2NVT C;  3GTL C;  1K83 C;  4BY1 C;  5IYB K;  3S16 K;  3H0G C;  3HOW C;  2NVQ C;  2NVY C;  4C2M C;  4C3H C;  4G7Z A;  1TWA C;  1Y1W K;  1I6H K;  3PO3 C;  4G7O A;  3S17 C;  2R93 K;  3I4M C;  3S1N C;  4MEY A;  4A3K C;  4X6A C;  3EQL A;  2R93 C;  2E2I K;  3HOV K;  4QIW L;  2R7Z C;  4OIO A;  2E2J C;  3S2H C;  4BY7 K;  5FJ8 K;  2NVT K;  4OIN A;  4C3J C;  4BXX C;  4QIW D;  4BXX K;  2A6E A;  1I50 C;  4JK1 A;  1ZYR A;  2JA7 C;  3S1R K;  4A3L K;  2A68 A;  5TMF A;  4A93 C;  2JA6 K;  4Q5S A;  1HQM A;  4ZH4 A;  5IYD C;  2R92 C;  3S15 C;  4A3J K;  3FKI K;  1SFO K;  2E2H C;  2WB1 D;  3FKI C;  3GTQ K;  4OIQ A;  2PA8 L;  4C3J K;  2NVQ K;  1I6V A;  4A3I C;  1I3Q K;  1I6H C;  1TWH C;  4A93 K;  1TWG C;  3HKZ D;  1BDF A;  2O5I A;  4KN7 A;  4XLP A;  1TWH K;  4MEX A;  1SFO C;  3PO2 K;  3S1Q K;  5IP9 K;  3HOX K;  4YFN A;  1YNN A;  2PPB A;  4AYB L;  2VUM K;  5C4X C;  3M3Y K;  3HOW K;  5C4J K;  1SMY A;  3DXJ A;  4BBR K;  3GTO C;  4A3E K;  3S1R C;  4LK1 A;  2JA8 C;  3GTP C;  4Y52 C;  4A3G C;  4OIR A;  1I50 K;  3RZD K;  3PO2 C;  4A3D C;  4A3D K;  4YFX A;  3RZD C;  2A69 A;  1R9T C;  3M3Y C;  4XLN A;  2JA5 K;  3GTM K;  5M3F K;  2R7Z K;  1XPP A;  3K7A K;  2WAQ L;  3GTL K;  3GTQ C;  5M5W K;  2BE5 A;  4A3C C;  3PO3 K;  5M5Y K;  3S1M K;  4XSZ A;  4A3M C;  3S1N K;  4LLG A;  3S1M C;  3CQZ K;  5C3E C;  3GTG K;  3HOY C;  3K7A C;  1WCM C;  3GTK C;  1K83 K;  1IW7 A;  3HOY K;  4G7H A;  2B63 C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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