5IP9C

Structure of rna polymerase ii-tfiif complex
Total Genus 61
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
61
sequence length
266
structure length
266
Chain Sequence
b'EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD'
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Transcription initiation complex structures elucidate DNA opening.
pubmed doi rcsb
source organism Saccharomyces cerevisiae
molecule tags Transcription
total genus 61
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2016-03-09

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 5ip9C02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 5ip9C01
3CQZK 4BY7C 2JA6K 4A3EK 4KMUA 1TWHK 3CQZC 2JA6C 1TWGK 1TWHC 3HOUC 3M3YK 3HOXC 2E2JC 3S1MK 5IP7K 4BBSC 4LLGA 4BY1C 4Q5SA 1TWFK 4OINA 4C2MC 2A6EA 2VUMC 3H3VD 4Y7NK 4A3KK 3I4NC 2BE5A 4A3LC 1BDFA 4Q4ZA 3M4OC 3HKZL 2JA5K 3GTGK 2JA8K 3GTGC 5C3EK 3S2DC 3I4MC 1R9TC 3S15C 5C4JK 4C3IC 2R7ZC 1XPPA 3RZOC 2Y0SL 5TMFA 3HOVK 2WAQD 2PMZD 3HOVC 4BXXK 3H0GC 5M5YK 4A3DC 5FLMC 3S1NC 2O5JA 1TWCK 5M3MK 2R93K 4A3JC 3WODA 3K7AK 1ZYRA 1TWCC 2WB1L 2E2HC 4BBRK 2PA8L 2B63K 4YFKA 4A3EC 4G7HA 4ZH4A 2B63C 1TWGC 3M3YC 2NVXK 5IP7C 3S14K 1K83K 2NVXC 3S14C 1TWFC 4AYBL 3GTKK 1K83C 5IP9K 5C44K 4QIWD 1IW7A 4Y7NC 4A3KC 3GTKC 3HOYK 4QJVB 4A3IK 2JA5C 4GZYA 4YFNA 2JA8C 3GTLK 5FJ8K 5IYBK 1I3QK 5C3EC 5M5XK 3GTQK 4A3BK 4MEYA 4OIPA 3RZDK 5C4JC 4A3BC 2E2IK 2PPBA 2E2IC 1Y1WK 3S1QK 4OIQA 3GTPK 1I6HK 4BXXC 3S1QC 2R92K 2YU9K 3GTPC 3S2HK 3HOZK 2R92C 4JK1A 3HOZC 4LK0A 2R93C 2NVYK 4C3HK 3K7AC 3S1RK 2NVYC 4BBRC 4A3MK 4XSXA 1TWAK 4X6AK 3PO2K 1YNNA 3GTJK 4A3MC 2PMZL 1TWAC 4G7ZA 2NVTK 5IYCK 5D4DA 1SMYA 4KN4A 1SFOK 4XLPA 1WCMK 4KN7A 4MQ9A 2CW0A 5IP9C 4A3FK 5C44C 3HOYC 5C4XK 3S16K 4A3IC 4C3JK 3GTMK 1I50K 3S16C 4YFXA 4C3JC 3GTLC 4XLNA 3DXJA 1I3QC 1I50C 5IYBC 3FKIK 3PO3K 3GTQC 5TMCA 3RZDC 4YG2A 2O5IA 2JA7K 3HKZD 4A3CK 4BY7K 4A93K 3H3VL 4OIRA 2JA7C 4A93C 3HOUK 1Y1WC 3HOXK 4QIWL 4LK1A 2E2JK 3S17K 1I6HC 4BBSK 2A68A 3EQLA 2E2HK 4BY1K 2YU9C 3S17C 3S2HC 4A3GK 2Y0SD 4C2MK 2A6HA 2VUMK 4A3GC 4Y52K 5M3FK 4Y52C 4C3HC 3S1RC 3I4NK 1HQMA 4A3LK 3GTOK 3M4OK 3GTOC 4XSZA 4MEXA 4LJZA 4X6AC 3PO2C 3GTJC 1YNJA 2WAQL 3S2DK 2NVTC 2WB1D 5IYCC 3I4MK 1R9TK 4OIOA 3S15K 4C3IK 4NOIA 2PA8D 2R7ZK 3S1MC 4QJVA 2NVQK 3RZOK 1SFOC 4G7OA 2NVQC 1WCMC 4A3FC 3H0GK 5IYDK 4A3DK 5C4XC 1Y1VK 5FLMK 5IYDC 3S1NK 2A69A 3GTMC 4AYBD 3HOWK 1Y1VC 3PO3C 3HOWC 1I6VA 5M5WK 4A3JK 3FKIC 4A3CC
chains in the Genus database with same CATH superfamily
4BY7C 5DM6S 3M3YK 3HOXC 2E2JC 3Q3QA 2L3UA 3PIPS 2RH6A 4Q5SA 1TWFK 2JA7A 3LAPA 1WQGA 2ZUFA 3TFJA 4Q4ZA 3M4OC 3GTGK 2JA8K 5C3EK 3T00A 1R9TC 1BJTA 5CHPA 5E68A 2PMZD 3HOVC 5M5YK 4A3DC 5EGEA 1SFOA 1TWCK 3WODA 3K7AK 4GTEA 2E2HC 3ADAC 4ZH4A 1WSRA 1O28A 2XCOA 2KQ1A 2NVXK 3TFHA 3GTKK 1O2AA 5JFEA 4A3KC 3HOYK 5HL7S 4IO9S 4GZYA 4RMFA 3V4GA 4YFNA 2ZJPS 3GTQK 4A3BK 4C45A 4DDQA 1XXCA 3GTGA 4ILDA 1Y1WK 3S1QK 2ZJQS 2YU9K 3GTPC 3AD8C 3S2HK 3HOZK 2R92C 1WORA 1JVIA 2NVYK 1V5VA 4XSXA 1TWAK 1XZPB 4X6AK 4KDDA 1YNNA 1ISEA 4WCES 1TWCA 1ZXOA 4KB2A 3NUHA 5IP9C 4AH6A 3FHZA 5C44C 4A3IC 3LPXA 2NVXA 3S16C 2XCRB 1XZQB 1WIHA 3A8JA 3GTKA 3BP3A 4A93K 2JA7C 2V6UA 2RGRA 2A68A 3EQLA 4BY1K 3GTQA 3LYWA 3G4AA 2VUMK 4A3GC 3AD7C 3I4NK 4C3HC 3S1RC 1Y1WA 1GE9A 4GTFA 4G0UA 3ERED 4LJZA 1YNJA 4WFBS 2R93A 2NVTC 3S1MK 3I4MK 1HI9A 2R7ZK 2NVYA 4IOAS 2NVQK 1SFOC 1B4AA 5IORA 1TWAA 4A3FC 3S0XA 3SZZA 5IYDK 4KMAA 5FLMK 3S1NK 3PO3C 3HOWC 4A3JK 3FKIC 3CQZK 2JA6K 1O24A 3CAGA 4WJ4A 5IP7K 4OINA 2GAGC 3BUEA 2ZJRS 3GEIA 3GTGC 3G4CA 3S2DC 2VUMA 2FQOA 3S15C 4C3IC 3RZOC 2L5NA 5HL8A 3H0GC 1IS1A 2R7ZA 3PIOS 1PJ5A 4M1XA 3OEPA 1FEUA 1TWCC 2WB1L 4PAAA 5JVHS 1IE0A 2B63K 3HXAA 4A3EC 1VLOA 4WFAS 1TWGC 3S14K 3OREA 2NVXC 3CQZA 2JA6A 5L46A 3GTKC 1IW7A 4Y7NC 2EBBA 2ZFZA 2JA5C 2GAHC 3GTLK 5FJ8K 5IYBK 1I3QK 5M5XK 4MEYA 5HQHA 4OIPA 3TTGA 5C4JC 4A3BC 4WFNS 1J6XA 2FQTA 4BLBA 2P8TA 4BXXC 2ZUEA 3S1QC 4G0VA 4P5AA 2XCQA 4JK1A 3HOZC 1J98A 2R93C 4GTAA 4KMHA 4U67S 2NVYC 1WOSA 2GSOA 4BBRC 4A3MK 3PO2K 1TWAC 5D4DA 4KN4A 1EQRA 4XLPA 1WCMK 5IOQA 3OPFA 2B63A 4WJ3M 1KQ4A 4GTLA 5C4XK 3GTMK 1TWFA 3DXJA 3BP8C 5TMCA 3RZDC 2O5IA 4BY7K 4OIRA 1ZVUA 5CJ9A 4A93C 3HOXK 2E2JK 3GTLA 1F7VA 3S17K 1I6HC 1I3QA 4KASA 4Y52K 3A8IA 3GTOK 3M4OK 4XSZA 3GTJC 2WB1D 5IYCC 1R9TK 4OIOA 4IOCS 3S1MC 3FOEA 2NVQC 4P5BA 5JVOA 4A3DK 5IYDC 2A69A 1O2BA 1WCMA 4A3CC 3N0CA 3TFIA 2E2HK 4KMUA 1TWHK 1WSVA 3CQZC 2JA6C 3GTMA 3HOUC 3GEHA 4KM8A 4BBSC 4LLGA 1USMA 4C2MC 2A6EA 3H3VD 1G51A 5DM7S 2GSNA 4A3KK 4A3LC 3GSIA 3HKZL 4FM9A 2YU9A 1O2FB 2D6FC 3N0BA 3AD9C 4P9SA 1O25A 2Y0SL 5TMFA 3GTOA 1XZQA 3AQOA 1ZYRA 1B4BA 4YFKA 1BS2A 4G7HA 2B63C 4WILA 1F93A 3M3YC 1K83K 3T01A 3S14C 1TWFC 2E2HA 3A8KA 5IP9K 5C44K 5IOTA 1TWHA 4QJVB 4A3IK 1YX2A 3JSTA 2JA8C 4WF9S 4KM9A 5C3EC 2CFAB 2E2IK 2PPBA 1L0WA 5IOSA 1AB4A 1PJ7A 4LQYA 3CF5S 1EFWA 1WOPA 3FOFA 1EH1A 4C3HK 3S1RK 3K7AC 1DD5A 5TJ3A 2V6SA 4A3MC 1IL2A 4G7ZA 2KXYA 2JH3A 2NVTK 3SZYA 3GIRA 1O29A 1SFOK 4MQ9A 1UV7A 2CW0A 4A3FK 1DCHA 2W7VA 3HOYC 4C3JK 1I50K 4YFXA 4XLNA 1K83A 3PO3K 4KC6A 3FKIK 3GTQC 4XCHA 4YG2A 1RU0A 3HKZD 1XXBA 3H3VL 1VH2A 1Y1WC 4PABA 4QIWL 1C0AA 4GT9A 2YU9C 3S17C 3S2HC 3AQPA 2Y0SD 2A6HA 4O2DA 1VRQC 2E2IA 4Y52C 1HQMA 2KPUA 3GTOC 4X6AC 3S2DK 1INNA 3S15K 4KAWX 4C3IK 3RZOK 3H0GK 5EGHA 3L4KA 1Y1VK 1JOEA 1VGXA 5M5WK 1I6VA 3L4JA 4A3EK 1TWGK 1TWHC 1I50A 3QX3A 1PJ6A 3FKIA 4BY1C 1EK8A 2VUMC 4Y7NK 3I4NC 2BE5A 1O27A 1BDFA 2JA5K 1F9NA 4GFQA 2Y3PA 4GTBA 3I4MC 5C4JK 2R7ZC 1XPPA 3GDZA 3HOVK 2GSUA 1YCLA 2WAQD 4BXXK 3GEEA 1WQHA 5FLMC 3S1NC 2O5JA 3MMLB 1IBAA 1USOA 5M3MK 1X31C 2R93K 4A3JC 1ZQ1C 3N3YA 3AH5A 2KWAA 4BBRK 2PA8L 2V6TA 3H0GA 4KMDA 1Y1VA 4BKWA 5IP7C 1XZPA 4AYBL 1K83C 4QIWD 5JVGS 1TWGA 1DCPA 1IQ0A 1J6VA 3RZDK 1F7UA 1EI6A 1J6WA 1ZBSA 3LAJA 2E2IC 2JA5A 4OIQA 3GTPK 1I6HK 2R92K 1R9TA 1WOOA 4LK0A 1VJEA 4G0WA 3IPJA 1WQFA 3GTJK 2PMZL 1JQWA 4BLAA 5IYCK 1SMYA 4FZBA 4KN7A 4LOWA 3VA7A 4GTDA 4GTCA 3S16K 2P5MA 4C3JC 3GTLC 5IYBC 1I3QC 1I50C 1BGWA 4A3CK 2JA7K 4J3NA 3DLLS 4LR2A 3HOUK 4LK1A 4BBSK 4A3GK 4C2MK 1XXAA 5M3FK 4A3LK 4KARA 3GTPA 2WAQL 4MEXA 2R92A 3PO2C 4KB4A 3T02A 4NOIA 2PA8D 4QJVA 4G7OA 2PHCB 1DCOA 1WCMC 3GTJA 5C4XC 3GTMC 2CFAA 4AYBD 3HOWK 1Y1VC 1O26A 4KATA
chains in the Genus database with same CATH topology
3CQZK 4BY7C 2JA6K 4A3EK 4KMUA 1TWHK 3CQZC 2JA6C 1TWGK 1TWHC 3HOUC 3M3YK 3HOXC 2E2JC 3S1MK 5IP7K 4BBSC 4LLGA 4BY1C 4Q5SA 1TWFK 4OINA 4C2MC 2A6EA 2VUMC 3H3VD 4Y7NK 4A3KK 3I4NC 2BE5A 4A3LC 1BDFA 4Q4ZA 3M4OC 3HKZL 2JA5K 3GTGK 2JA8K 3GTGC 5C3EK 3S2DC 3I4MC 1R9TC 3S15C 5C4JK 4C3IC 2R7ZC 1XPPA 3RZOC 2Y0SL 5TMFA 3HOVK 2WAQD 2PMZD 3HOVC 4BXXK 3H0GC 5M5YK 4A3DC 5FLMC 3S1NC 2O5JA 1TWCK 5M3MK 2R93K 4A3JC 3WODA 3K7AK 1ZYRA 1TWCC 2WB1L 2E2HC 4BBRK 2PA8L 2B63K 4YFKA 4A3EC 4G7HA 4ZH4A 2B63C 1TWGC 3M3YC 2NVXK 5IP7C 3S14K 1K83K 2NVXC 3S14C 1TWFC 4AYBL 3GTKK 1K83C 5IP9K 5C44K 4QIWD 1IW7A 4Y7NC 4A3KC 3GTKC 3HOYK 4QJVB 4A3IK 2JA5C 4GZYA 4YFNA 2JA8C 3GTLK 5FJ8K 5IYBK 1I3QK 5C3EC 5M5XK 3GTQK 4A3BK 4MEYA 4OIPA 3RZDK 5C4JC 4A3BC 2E2IK 2PPBA 2E2IC 1Y1WK 3S1QK 4OIQA 3GTPK 1I6HK 4BXXC 3S1QC 2R92K 2YU9K 3GTPC 3S2HK 3HOZK 2R92C 4JK1A 3HOZC 4LK0A 2R93C 2NVYK 4C3HK 3K7AC 3S1RK 2NVYC 4BBRC 4A3MK 4XSXA 1TWAK 4X6AK 3PO2K 1YNNA 3GTJK 4A3MC 2PMZL 1TWAC 4G7ZA 2NVTK 5IYCK 5D4DA 1SMYA 4KN4A 1SFOK 4XLPA 1WCMK 4KN7A 4MQ9A 2CW0A 5IP9C 4A3FK 5C44C 3HOYC 5C4XK 3S16K 4A3IC 4C3JK 3GTMK 1I50K 3S16C 4YFXA 4C3JC 3GTLC 4XLNA 3DXJA 1I3QC 1I50C 5IYBC 3FKIK 3PO3K 3GTQC 5TMCA 3RZDC 4YG2A 2O5IA 2JA7K 3HKZD 4A3CK 4BY7K 4A93K 3H3VL 4OIRA 2JA7C 4A93C 3HOUK 1Y1WC 3HOXK 4QIWL 4LK1A 2E2JK 3S17K 1I6HC 4BBSK 2A68A 3EQLA 2E2HK 4BY1K 2YU9C 3S17C 3S2HC 4A3GK 2Y0SD 4C2MK 2A6HA 2VUMK 4A3GC 4Y52K 5M3FK 4Y52C 4C3HC 3S1RC 3I4NK 1HQMA 4A3LK 3GTOK 3M4OK 3GTOC 4XSZA 4MEXA 4LJZA 4X6AC 3PO2C 3GTJC 1YNJA 2WAQL 3S2DK 2NVTC 2WB1D 5IYCC 3I4MK 1R9TK 4OIOA 3S15K 4C3IK 4NOIA 2PA8D 2R7ZK 3S1MC 4QJVA 2NVQK 3RZOK 1SFOC 4G7OA 2NVQC 1WCMC 4A3FC 3H0GK 5IYDK 4A3DK 5C4XC 1Y1VK 5FLMK 5IYDC 3S1NK 2A69A 3GTMC 4AYBD 3HOWK 1Y1VC 3PO3C 3HOWC 1I6VA 5M5WK 4A3JK 3FKIC 4A3CC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3CQZ K;  4BY7 C;  2JA6 K;  4A3E K;  4KMU A;  1TWH K;  3CQZ C;  2JA6 C;  1TWG K;  1TWH C;  3HOU C;  3M3Y K;  3HOX C;  2E2J C;  3S1M K;  5IP7 K;  4BBS C;  4LLG A;  4BY1 C;  4Q5S A;  1TWF K;  4OIN A;  4C2M C;  2A6E A;  2VUM C;  3H3V D;  4Y7N K;  4A3K K;  3I4N C;  2BE5 A;  4A3L C;  1BDF A;  4Q4Z A;  3M4O C;  3HKZ L;  2JA5 K;  3GTG K;  2JA8 K;  3GTG C;  5C3E K;  3S2D C;  3I4M C;  1R9T C;  3S15 C;  5C4J K;  4C3I C;  2R7Z C;  1XPP A;  3RZO C;  2Y0S L;  5TMF A;  3HOV K;  2WAQ D;  2PMZ D;  3HOV C;  4BXX K;  3H0G C;  5M5Y K;  4A3D C;  5FLM C;  3S1N C;  2O5J A;  1TWC K;  5M3M K;  2R93 K;  4A3J C;  3WOD A;  3K7A K;  1ZYR A;  1TWC C;  2WB1 L;  2E2H C;  4BBR K;  2PA8 L;  2B63 K;  4YFK A;  4A3E C;  4G7H A;  4ZH4 A;  2B63 C;  1TWG C;  3M3Y C;  2NVX K;  5IP7 C;  3S14 K;  1K83 K;  2NVX C;  3S14 C;  1TWF C;  4AYB L;  3GTK K;  1K83 C;  5IP9 K;  5C44 K;  4QIW D;  1IW7 A;  4Y7N C;  4A3K C;  3GTK C;  3HOY K;  4QJV B;  4A3I K;  2JA5 C;  4GZY A;  4YFN A;  2JA8 C;  3GTL K;  5FJ8 K;  5IYB K;  1I3Q K;  5C3E C;  5M5X K;  3GTQ K;  4A3B K;  4MEY A;  4OIP A;  3RZD K;  5C4J C;  4A3B C;  2E2I K;  2PPB A;  2E2I C;  1Y1W K;  3S1Q K;  4OIQ A;  3GTP K;  1I6H K;  4BXX C;  3S1Q C;  2R92 K;  2YU9 K;  3GTP C;  3S2H K;  3HOZ K;  2R92 C;  4JK1 A;  3HOZ C;  4LK0 A;  2R93 C;  2NVY K;  4C3H K;  3K7A C;  3S1R K;  2NVY C;  4BBR C;  4A3M K;  4XSX A;  1TWA K;  4X6A K;  3PO2 K;  1YNN A;  3GTJ K;  4A3M C;  2PMZ L;  1TWA C;  4G7Z A;  2NVT K;  5IYC K;  5D4D A;  1SMY A;  4KN4 A;  1SFO K;  4XLP A;  1WCM K;  4KN7 A;  4MQ9 A;  2CW0 A;  5IP9 C;  4A3F K;  5C44 C;  3HOY C;  5C4X K;  3S16 K;  4A3I C;  4C3J K;  3GTM K;  1I50 K;  3S16 C;  4YFX A;  4C3J C;  3GTL C;  4XLN A;  3DXJ A;  1I3Q C;  1I50 C;  5IYB C;  3FKI K;  3PO3 K;  3GTQ C;  5TMC A;  3RZD C;  4YG2 A;  2O5I A;  2JA7 K;  3HKZ D;  4A3C K;  4BY7 K;  4A93 K;  3H3V L;  4OIR A;  2JA7 C;  4A93 C;  3HOU K;  1Y1W C;  3HOX K;  4QIW L;  4LK1 A;  2E2J K;  3S17 K;  1I6H C;  4BBS K;  2A68 A;  3EQL A;  2E2H K;  4BY1 K;  2YU9 C;  3S17 C;  3S2H C;  4A3G K;  2Y0S D;  4C2M K;  2A6H A;  2VUM K;  4A3G C;  4Y52 K;  5M3F K;  4Y52 C;  4C3H C;  3S1R C;  3I4N K;  1HQM A;  4A3L K;  3GTO K;  3M4O K;  3GTO C;  4XSZ A;  4MEX A;  4LJZ A;  4X6A C;  3PO2 C;  3GTJ C;  1YNJ A;  2WAQ L;  3S2D K;  2NVT C;  2WB1 D;  5IYC C;  3I4M K;  1R9T K;  4OIO A;  3S15 K;  4C3I K;  4NOI A;  2PA8 D;  2R7Z K;  3S1M C;  4QJV A;  2NVQ K;  3RZO K;  1SFO C;  4G7O A;  2NVQ C;  1WCM C;  4A3F C;  3H0G K;  5IYD K;  4A3D K;  5C4X C;  1Y1V K;  5FLM K;  5IYD C;  3S1N K;  2A69 A;  3GTM C;  4AYB D;  3HOW K;  1Y1V C;  3PO3 C;  3HOW C;  1I6V A;  5M5W K;  4A3J K;  3FKI C;  4A3C C; 
#chains in the Genus database with same CATH topology
 4BY7 C;  5DM6 S;  3M3Y K;  3HOX C;  2E2J C;  3Q3Q A;  2L3U A;  3PIP S;  2RH6 A;  4Q5S A;  1TWF K;  2JA7 A;  3LAP A;  1WQG A;  2ZUF A;  3TFJ A;  4Q4Z A;  3M4O C;  3GTG K;  2JA8 K;  5C3E K;  3T00 A;  1R9T C;  1BJT A;  5CHP A;  5E68 A;  2PMZ D;  3HOV C;  5M5Y K;  4A3D C;  5EGE A;  1SFO A;  1TWC K;  3WOD A;  3K7A K;  4GTE A;  2E2H C;  3ADA C;  4ZH4 A;  1WSR A;  1O28 A;  2XCO A;  2KQ1 A;  2NVX K;  3TFH A;  3GTK K;  1O2A A;  5JFE A;  4A3K C;  3HOY K;  5HL7 S;  4IO9 S;  4GZY A;  4RMF A;  3V4G A;  4YFN A;  2ZJP S;  3GTQ K;  4A3B K;  4C45 A;  4DDQ A;  1XXC A;  3GTG A;  4ILD A;  1Y1W K;  3S1Q K;  2ZJQ S;  2YU9 K;  3GTP C;  3AD8 C;  3S2H K;  3HOZ K;  2R92 C;  1WOR A;  1JVI A;  2NVY K;  1V5V A;  4XSX A;  1TWA K;  1XZP B;  4X6A K;  4KDD A;  1YNN A;  1ISE A;  4WCE S;  1TWC A;  1ZXO A;  4KB2 A;  3NUH A;  5IP9 C;  4AH6 A;  3FHZ A;  5C44 C;  4A3I C;  3LPX A;  2NVX A;  3S16 C;  2XCR B;  1XZQ B;  1WIH A;  3A8J A;  3GTK A;  3BP3 A;  4A93 K;  2JA7 C;  2V6U A;  2RGR A;  2A68 A;  3EQL A;  4BY1 K;  3GTQ A;  3LYW A;  3G4A A;  2VUM K;  4A3G C;  3AD7 C;  3I4N K;  4C3H C;  3S1R C;  1Y1W A;  1GE9 A;  4GTF A;  4G0U A;  3ERE D;  4LJZ A;  1YNJ A;  4WFB S;  2R93 A;  2NVT C;  3S1M K;  3I4M K;  1HI9 A;  2R7Z K;  2NVY A;  4IOA S;  2NVQ K;  1SFO C;  1B4A A;  5IOR A;  1TWA A;  4A3F C;  3S0X A;  3SZZ A;  5IYD K;  4KMA A;  5FLM K;  3S1N K;  3PO3 C;  3HOW C;  4A3J K;  3FKI C;  3CQZ K;  2JA6 K;  1O24 A;  3CAG A;  4WJ4 A;  5IP7 K;  4OIN A;  2GAG C;  3BUE A;  2ZJR S;  3GEI A;  3GTG C;  3G4C A;  3S2D C;  2VUM A;  2FQO A;  3S15 C;  4C3I C;  3RZO C;  2L5N A;  5HL8 A;  3H0G C;  1IS1 A;  2R7Z A;  3PIO S;  1PJ5 A;  4M1X A;  3OEP A;  1FEU A;  1TWC C;  2WB1 L;  4PAA A;  5JVH S;  1IE0 A;  2B63 K;  3HXA A;  4A3E C;  1VLO A;  4WFA S;  1TWG C;  3S14 K;  3ORE A;  2NVX C;  3CQZ A;  2JA6 A;  5L46 A;  3GTK C;  1IW7 A;  4Y7N C;  2EBB A;  2ZFZ A;  2JA5 C;  2GAH C;  3GTL K;  5FJ8 K;  5IYB K;  1I3Q K;  5M5X K;  4MEY A;  5HQH A;  4OIP A;  3TTG A;  5C4J C;  4A3B C;  4WFN S;  1J6X A;  2FQT A;  4BLB A;  2P8T A;  4BXX C;  2ZUE A;  3S1Q C;  4G0V A;  4P5A A;  2XCQ A;  4JK1 A;  3HOZ C;  1J98 A;  2R93 C;  4GTA A;  4KMH A;  4U67 S;  2NVY C;  1WOS A;  2GSO A;  4BBR C;  4A3M K;  3PO2 K;  1TWA C;  5D4D A;  4KN4 A;  1EQR A;  4XLP A;  1WCM K;  5IOQ A;  3OPF A;  2B63 A;  4WJ3 M;  1KQ4 A;  4GTL A;  5C4X K;  3GTM K;  1TWF A;  3DXJ A;  3BP8 C;  5TMC A;  3RZD C;  2O5I A;  4BY7 K;  4OIR A;  1ZVU A;  5CJ9 A;  4A93 C;  3HOX K;  2E2J K;  3GTL A;  1F7V A;  3S17 K;  1I6H C;  1I3Q A;  4KAS A;  4Y52 K;  3A8I A;  3GTO K;  3M4O K;  4XSZ A;  3GTJ C;  2WB1 D;  5IYC C;  1R9T K;  4OIO A;  4IOC S;  3S1M C;  3FOE A;  2NVQ C;  4P5B A;  5JVO A;  4A3D K;  5IYD C;  2A69 A;  1O2B A;  1WCM A;  4A3C C;  3N0C A;  3TFI A;  2E2H K;  4KMU A;  1TWH K;  1WSV A;  3CQZ C;  2JA6 C;  3GTM A;  3HOU C;  3GEH A;  4KM8 A;  4BBS C;  4LLG A;  1USM A;  4C2M C;  2A6E A;  3H3V D;  1G51 A;  5DM7 S;  2GSN A;  4A3K K;  4A3L C;  3GSI A;  3HKZ L;  4FM9 A;  2YU9 A;  1O2F B;  2D6F C;  3N0B A;  3AD9 C;  4P9S A;  1O25 A;  2Y0S L;  5TMF A;  3GTO A;  1XZQ A;  3AQO A;  1ZYR A;  1B4B A;  4YFK A;  1BS2 A;  4G7H A;  2B63 C;  4WIL A;  1F93 A;  3M3Y C;  1K83 K;  3T01 A;  3S14 C;  1TWF C;  2E2H A;  3A8K A;  5IP9 K;  5C44 K;  5IOT A;  1TWH A;  4QJV B;  4A3I K;  1YX2 A;  3JST A;  2JA8 C;  4WF9 S;  4KM9 A;  5C3E C;  2CFA B;  2E2I K;  2PPB A;  1L0W A;  5IOS A;  1AB4 A;  1PJ7 A;  4LQY A;  3CF5 S;  1EFW A;  1WOP A;  3FOF A;  1EH1 A;  4C3H K;  3S1R K;  3K7A C;  1DD5 A;  5TJ3 A;  2V6S A;  4A3M C;  1IL2 A;  4G7Z A;  2KXY A;  2JH3 A;  2NVT K;  3SZY A;  3GIR A;  1O29 A;  1SFO K;  4MQ9 A;  1UV7 A;  2CW0 A;  4A3F K;  1DCH A;  2W7V A;  3HOY C;  4C3J K;  1I50 K;  4YFX A;  4XLN A;  1K83 A;  3PO3 K;  4KC6 A;  3FKI K;  3GTQ C;  4XCH A;  4YG2 A;  1RU0 A;  3HKZ D;  1XXB A;  3H3V L;  1VH2 A;  1Y1W C;  4PAB A;  4QIW L;  1C0A A;  4GT9 A;  2YU9 C;  3S17 C;  3S2H C;  3AQP A;  2Y0S D;  2A6H A;  4O2D A;  1VRQ C;  2E2I A;  4Y52 C;  1HQM A;  2KPU A;  3GTO C;  4X6A C;  3S2D K;  1INN A;  3S15 K;  4KAW X;  4C3I K;  3RZO K;  3H0G K;  5EGH A;  3L4K A;  1Y1V K;  1JOE A;  1VGX A;  5M5W K;  1I6V A;  3L4J A;  4A3E K;  1TWG K;  1TWH C;  1I50 A;  3QX3 A;  1PJ6 A;  3FKI A;  4BY1 C;  1EK8 A;  2VUM C;  4Y7N K;  3I4N C;  2BE5 A;  1O27 A;  1BDF A;  2JA5 K;  1F9N A;  4GFQ A;  2Y3P A;  4GTB A;  3I4M C;  5C4J K;  2R7Z C;  1XPP A;  3GDZ A;  3HOV K;  2GSU A;  1YCL A;  2WAQ D;  4BXX K;  3GEE A;  1WQH A;  5FLM C;  3S1N C;  2O5J A;  3MML B;  1IBA A;  1USO A;  5M3M K;  1X31 C;  2R93 K;  4A3J C;  1ZQ1 C;  3N3Y A;  3AH5 A;  2KWA A;  4BBR K;  2PA8 L;  2V6T A;  3H0G A;  4KMD A;  1Y1V A;  4BKW A;  5IP7 C;  1XZP A;  4AYB L;  1K83 C;  4QIW D;  5JVG S;  1TWG A;  1DCP A;  1IQ0 A;  1J6V A;  3RZD K;  1F7U A;  1EI6 A;  1J6W A;  1ZBS A;  3LAJ A;  2E2I C;  2JA5 A;  4OIQ A;  3GTP K;  1I6H K;  2R92 K;  1R9T A;  1WOO A;  4LK0 A;  1VJE A;  4G0W A;  3IPJ A;  1WQF A;  3GTJ K;  2PMZ L;  1JQW A;  4BLA A;  5IYC K;  1SMY A;  4FZB A;  4KN7 A;  4LOW A;  3VA7 A;  4GTD A;  4GTC A;  3S16 K;  2P5M A;  4C3J C;  3GTL C;  5IYB C;  1I3Q C;  1I50 C;  1BGW A;  4A3C K;  2JA7 K;  4J3N A;  3DLL S;  4LR2 A;  3HOU K;  4LK1 A;  4BBS K;  4A3G K;  4C2M K;  1XXA A;  5M3F K;  4A3L K;  4KAR A;  3GTP A;  2WAQ L;  4MEX A;  2R92 A;  3PO2 C;  4KB4 A;  3T02 A;  4NOI A;  2PA8 D;  4QJV A;  4G7O A;  2PHC B;  1DCO A;  1WCM C;  3GTJ A;  5C4X C;  3GTM C;  2CFA A;  4AYB D;  3HOW K;  1Y1V C;  1O26 A;  4KAT A; 
#chains in the Genus database with same CATH homology
 3CQZ K;  4BY7 C;  2JA6 K;  4A3E K;  4KMU A;  1TWH K;  3CQZ C;  2JA6 C;  1TWG K;  1TWH C;  3HOU C;  3M3Y K;  3HOX C;  2E2J C;  3S1M K;  5IP7 K;  4BBS C;  4LLG A;  4BY1 C;  4Q5S A;  1TWF K;  4OIN A;  4C2M C;  2A6E A;  2VUM C;  3H3V D;  4Y7N K;  4A3K K;  3I4N C;  2BE5 A;  4A3L C;  1BDF A;  4Q4Z A;  3M4O C;  3HKZ L;  2JA5 K;  3GTG K;  2JA8 K;  3GTG C;  5C3E K;  3S2D C;  3I4M C;  1R9T C;  3S15 C;  5C4J K;  4C3I C;  2R7Z C;  1XPP A;  3RZO C;  2Y0S L;  5TMF A;  3HOV K;  2WAQ D;  2PMZ D;  3HOV C;  4BXX K;  3H0G C;  5M5Y K;  4A3D C;  5FLM C;  3S1N C;  2O5J A;  1TWC K;  5M3M K;  2R93 K;  4A3J C;  3WOD A;  3K7A K;  1ZYR A;  1TWC C;  2WB1 L;  2E2H C;  4BBR K;  2PA8 L;  2B63 K;  4YFK A;  4A3E C;  4G7H A;  4ZH4 A;  2B63 C;  1TWG C;  3M3Y C;  2NVX K;  5IP7 C;  3S14 K;  1K83 K;  2NVX C;  3S14 C;  1TWF C;  4AYB L;  3GTK K;  1K83 C;  5IP9 K;  5C44 K;  4QIW D;  1IW7 A;  4Y7N C;  4A3K C;  3GTK C;  3HOY K;  4QJV B;  4A3I K;  2JA5 C;  4GZY A;  4YFN A;  2JA8 C;  3GTL K;  5FJ8 K;  5IYB K;  1I3Q K;  5C3E C;  5M5X K;  3GTQ K;  4A3B K;  4MEY A;  4OIP A;  3RZD K;  5C4J C;  4A3B C;  2E2I K;  2PPB A;  2E2I C;  1Y1W K;  3S1Q K;  4OIQ A;  3GTP K;  1I6H K;  4BXX C;  3S1Q C;  2R92 K;  2YU9 K;  3GTP C;  3S2H K;  3HOZ K;  2R92 C;  4JK1 A;  3HOZ C;  4LK0 A;  2R93 C;  2NVY K;  4C3H K;  3K7A C;  3S1R K;  2NVY C;  4BBR C;  4A3M K;  4XSX A;  1TWA K;  4X6A K;  3PO2 K;  1YNN A;  3GTJ K;  4A3M C;  2PMZ L;  1TWA C;  4G7Z A;  2NVT K;  5IYC K;  5D4D A;  1SMY A;  4KN4 A;  1SFO K;  4XLP A;  1WCM K;  4KN7 A;  4MQ9 A;  2CW0 A;  5IP9 C;  4A3F K;  5C44 C;  3HOY C;  5C4X K;  3S16 K;  4A3I C;  4C3J K;  3GTM K;  1I50 K;  3S16 C;  4YFX A;  4C3J C;  3GTL C;  4XLN A;  3DXJ A;  1I3Q C;  1I50 C;  5IYB C;  3FKI K;  3PO3 K;  3GTQ C;  5TMC A;  3RZD C;  4YG2 A;  2O5I A;  2JA7 K;  3HKZ D;  4A3C K;  4BY7 K;  4A93 K;  3H3V L;  4OIR A;  2JA7 C;  4A93 C;  3HOU K;  1Y1W C;  3HOX K;  4QIW L;  4LK1 A;  2E2J K;  3S17 K;  1I6H C;  4BBS K;  2A68 A;  3EQL A;  2E2H K;  4BY1 K;  2YU9 C;  3S17 C;  3S2H C;  4A3G K;  2Y0S D;  4C2M K;  2A6H A;  2VUM K;  4A3G C;  4Y52 K;  5M3F K;  4Y52 C;  4C3H C;  3S1R C;  3I4N K;  1HQM A;  4A3L K;  3GTO K;  3M4O K;  3GTO C;  4XSZ A;  4MEX A;  4LJZ A;  4X6A C;  3PO2 C;  3GTJ C;  1YNJ A;  2WAQ L;  3S2D K;  2NVT C;  2WB1 D;  5IYC C;  3I4M K;  1R9T K;  4OIO A;  3S15 K;  4C3I K;  4NOI A;  2PA8 D;  2R7Z K;  3S1M C;  4QJV A;  2NVQ K;  3RZO K;  1SFO C;  4G7O A;  2NVQ C;  1WCM C;  4A3F C;  3H0G K;  5IYD K;  4A3D K;  5C4X C;  1Y1V K;  5FLM K;  5IYD C;  3S1N K;  2A69 A;  3GTM C;  4AYB D;  3HOW K;  1Y1V C;  3PO3 C;  3HOW C;  1I6V A;  5M5W K;  4A3J K;  3FKI C;  4A3C C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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