5IP9C

Structure of rna polymerase ii-tfiif complex
Total Genus 61
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
61
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Transcription initiation complex structures elucidate DNA opening.
pubmed doi rcsb
source organism Saccharomyces cerevisiae
molecule tags Transcription
total genus 61
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2016-03-09

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 5ip9C02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 5ip9C01
1Y1WK 2BE5A 4YFXA 5TMFA 2NVQC 2NVYC 1HQMA 3GTPC 3HOVC 1Y1VC 5C3EK 4A3CC 3PO2K 3S16C 1I3QC 3HOXK 4JK1A 4A3FK 4OIRA 4A93C 3S2DC 3DXJA 5IYDC 3GTOK 4AYBL 1R9TK 4Y7NC 4X6AC 2O5IA 1YNJA 1TWFK 5C4XK 4C3HK 5C44K 2PMZL 3GTGK 3GTKC 4A3JC 1I6VA 3RZDK 4QIWL 3S1RC 1TWCC 2A68A 2E2JK 1SMYA 3S14C 3GTLC 4KN4A 5C4JK 4A3DC 2NVTC 1TWHK 3GTJK 2E2IK 3HKZL 3HOWC 4BBRC 1YNNA 5M5WK 4BXXC 5C4JC 5M5XK 3HOZC 2R92K 2VUMC 2NVYK 4G7HA 4Y52K 2Y0SL 3M4OK 5FJ8K 3S2HK 5IYCC 2WAQD 2E2HC 3S1MC 4Q5SA 1TWGK 5IYBC 2JA5K 1I50K 3RZOC 4OIQA 3S17C 2YU9C 4BY1C 4C2MK 3I4MC 2JA8C 4C3IK 2JA6C 4A3IC 4A3BC 3I4NC 4A3JK 1WCMC 2WB1D 3S1RK 1TWAC 3PO3C 3GTQK 4A3KK 4XLNA 2NVTK 5M3FK 2B63K 1K83C 2CW0A 4XSZA 5IP7C 4A3MK 3S1QK 4BY7K 3H3VD 2R7ZK 3CQZK 2NVXC 2R93C 1SFOK 3S1NC 2JA7C 1IW7A 4A3LC 5IP9K 5FLMK 3K7AC 4C3JC 4QJVA 4MEXA 2NVQK 3S15C 3GTPK 3HOVK 3H0GC 4A3EC 1Y1VK 4A3CK 4OIOA 2WAQL 4A3GC 4QJVB 3S16K 1I3QK 4A3BK 5D4DA 3S2DK 3HOUC 4A93K 5IYDK 3GTMC 1Y1WC 4Y7NK 2O5JA 4X6AK 4LLGA 4YFKA 2WB1L 5C3EC 3GTKK 3S1NK 2JA7K 3PO2C 1TWCK 3S14K 3GTLK 3HOXC 3H3VL 4OINA 4A3DK 1ZYRA 3WODA 4BBRK 3HOWK 3GTOC 3M3YC 4BXXK 1R9TC 3HOZK 2VUMK 1TWFC 2A6HA 4G7ZA 5C4XC 4C3HC 5C44C 4A3GK 4LK0A 3GTGC 3RZDC 5IYCK 4ZH4A 4OIPA 2E2JC 4BBSC 3HOYC 1I6HC 2E2HK 3S1MK 2E2IC 4MQ9A 5IYBK 1TWHC 2A69A 3HOUK 4XSXA 4YFNA 2PA8D 4MEYA 1BDFA 3RZOK 2R92C 4LK1A 2YU9K 4BY1K 3S17K 3I4MK 2JA8K 2JA6K 4A3IK 4Y52C 3I4NK 4YG2A 1WCMK 3M4OC 1TWAK 3S2HC 3PO3K 3FKIC 4LJZA 1K83K 5IP7K 1TWGC 2JA5C 5M3MK 3M3YK 1XPPA 2NVXK 2R93K 1I50C 4C3IC 4Q4ZA 4NOIA 4AYBD 4C2MC 4A3LK 2A6EA 2PMZD 4A3FC 3K7AK 3GTQC 4XLPA 4C3JK 4A3KC 3HOYK 4BBSK 1I6HK 4QIWD 2B63C 4BY7C 3S15K 3S1QC 3EQLA 4A3MC 3H0GK 4A3EK 2R7ZC 3CQZC 2PPBA 3HKZD 5TMCA 1SFOC 4KMUA 4G7OA 4GZYA 5M5YK 5IP9C 2PA8L 5FLMC 2Y0SD 3FKIK 3GTJC 4KN7A 3GTMK
chains in the Genus database with same CATH superfamily
2CFAB 4YFXA 5TMFA 1EQRA 5C3EK 1DCHA 1I3QC 3PIPS 4A3FK 4OIRA 2FQOA 4WF9S 3DXJA 5IYDC 4X6AC 1TWFK 4C3HK 1WSRA 1BGWA 3GTQA 1I6VA 3A8JA 3GTLA 1JVIA 2E2JK 2E2IK 4A3DC 3N3YA 5M5WK 3TFHA 1IQ0A 2JH3A 2NVYK 4G7HA 4KMHA 1WOOA 2RH6A 1O2BA 1XZQB 5IYCC 4BLAA 4P9SA 3HXAA 2XCOA 1KQ4A 5IOSA 4C2MK 3I4MC 3FHZA 4WFNS 1G51A 4XLNA 4BKWA 2B63K 2CW0A 2NVXA 3H3VD 4KARA 1SFOK 4FM9A 3K7AC 4MEXA 1UV7A 4LQYA 2NVQK 3S15C 1INNA 3GTPK 5DM6S 3HOVK 4A3CK 4A3GC 3BUEA 3ERED 4QJVB 2D6FC 3S16K 1ZXOA 3S2DK 3HOUC 3GTMC 1Y1WC 2O5JA 3OPFA 2WB1L 4GTCA 2ZUEA 4GTBA 4G0VA 2JA7K 3PO2C 1EI6A 2ZJQS 1JQWA 3WODA 3GTOC 3M3YC 1TWFA 1J6XA 5TJ3A 2GSOA 4J3NA 4C45A 3NUHA 3HOZK 5JVHS 1IL2A 4KC6A 4LK0A 3GTGC 2E2IA 3HOYC 5IOQA 5IYBK 1TWHC 2A69A 4WCES 4YFNA 3RZOK 2R92C 2YU9K 3VA7A 4YG2A 1ISEA 3S2HC 1VRQC 1TWGC 1O29A 2R93K 4KB2A 1O25A 4NOIA 4AYBD 4KASA 4A3LK 1F7VA 2B63A 3PIOS 4M1XA 4QIWD 4BY7C 3AH5A 3S1QC 3EQLA 4A3MC 1SFOA 4A3EK 1O26A 3HKZD 4GTEA 4KMUA 3GTJA 1DCOA 4KM9A 3L4JA 1VLOA 5C4JC 3GTPA 2ZJRS 2Y3PA 1HQMA 3GEIA 3CF5S 1AB4A 3HOXK 4JK1A 3MMLB 1R9TK 5C4XK 3L4KA 4A3JC 3RZDK 1TWCC 1SMYA 3GTLC 4KN4A 4P5AA 2NVTC 4KM8A 3HOWC 4BBRC 1YNNA 1YCLA 1O24A 4Y52K 2WAQD 5HQHA 2JA5K 1EH1A 2YU9A 4OIQA 4GTAA 3GDZA 4A3IC 1WCMC 5DM7S 4XSZA 2KXYA 2R7ZK 3CQZK 2NVXC 1TWCA 4KDDA 1IW7A 5FLMK 4C3JC 1J98A 1Y1VK 1F93A 4FZBA 3GIRA 5D4DA 4GTFA 4A93K 4Y7NK 4PAAA 4LLGA 5C3EC 1WCMA 3GTKK 3AD9C 3S14K 2KPUA 3H3VL 4OINA 1YX2A 1R9TA 4BXXK 2VUMK 1TWFC 2A6HA 4C3HC 4A3GK 3IPJA 2E2JC 1I6HC 1HI9A 1J6WA 2E2HK 3S1MK 2E2IC 3HOUK 1L0WA 4MEYA 1BDFA 4LK1A 3S17K 4BY1K 2JA8K 2JA6K 3I4NK 3FKIA 1TWAK 3PO3K 4LJZA 1J6VA 2JA5A 4BLBA 1FEUA 1K83K 5IP7K 3M3YK 2PHCB 3G4AA 2GSUA 4XCHA 4Q4ZA 4C2MC 2PMZD 3FOEA 4XLPA 3OREA 2V6TA 2B63C 2R7ZA 1WOPA 2GSNA 3H0GK 4LOWA 5JFEA 2PPBA 1SFOC 1IE0A 1B4AA 1VGXA 5M5YK 2Y0SD 4KN7A 3GTJC 2BE5A 3AD7C 2NVYA 2NVQC 1Y1VA 4G0UA 4O2DA 3GTPC 3HOVC 4A3CC 4G0WA 3T01A 3S16C 2W7VA 1WIHA 3S2DC 4AYBL 5JVOA 2O5IA 1YNJA 3GTKA 5C44K 1PJ5A 2XCRB 4GT9A 1EK8A 3S1RC 4QIWL 5C4JK 1DD5A 3HKZL 2VUMA 1XZQA 5M5XK 4WFAS 4KB4A 3HOZC 1USOA 3M4OK 1USMA 1XXBA 5HL7S 1IBAA 4Q5SA 5IYBC 5HL8A 1I50K 2JA6A 3RZOC 3SZYA 2YU9C 4C3IK 4A3BC 3DLLS 4P5BA 4A3JK 5E68A 3GTQK 4A3KK 2GAGC 2NVTK 5M3FK 1BJTA 2R93C 2JA7A 3S1NC 4A3LC 5IP9K 1IS1A 3GEHA 4QJVA 3Q3QA 4A3EC 3AQOA 2KQ1A 4KMDA 2WAQL 1I3QK 3ADAC 2L5NA 5IYDK 3AD8C 4X6AK 5JVGS 4YFKA 3LAPA 4GTLA 4KMAA 3HOXC 4A3DK 3V4GA 3LAJA 1ZYRA 2R93A 1GE9A 1R9TC 2V6UA 1RU0A 2V6SA 4G7ZA 5C4XC 3JSTA 4PABA 4GFQA 3RZDC 1WQGA 5IYCK 4ZH4A 4OIPA 4IOCS 4BBSC 3LYWA 4WILA 1X31C 2PA8D 1XZPA 3A8KA 3I4MK 4Y52C 3FKIC 5CJ9A 1XXCA 2XCQA 2JA5C 5M3MK 1I50A 1F7UA 3S0XA 2ZJPS 2P5MA 1O28A 1WORA 4A3FC 3K7AK 1I6HK 3S15K 2R7ZC 3CQZC 1WOSA 5TMCA 3CAGA 3BP3A 4KAWX 4G7OA 4GZYA 5FLMC 4WJ3M 3GTMK 1Y1WK 1ZBSA 2NVYC 1Y1VC 1I3QA 4LR2A 3PO2K 3T02A 5IORA 3LPXA 3A8IA 1V5VA 4A93C 1DCPA 3GTOK 2FQTA 4Y7NC 1O2FB 2PMZL 3GTGK 3GTKC 4RMFA 2A68A 3HOYK 3S14C 1TWHK 3GTJK 3CQZA 1JOEA 4BXXC 2R92K 2VUMC 2CFAA 1C0AA 2Y0SL 2P8TA 1WSVA 5FJ8K 3S2HK 1WQFA 2E2HC 3S1MC 1TWGK 4WFBS 2ZUFA 1ZVUA 3S17C 4BY1C 2JA8C 2JA6C 3N0BA 1ZQ1C 3I4NC 5EGHA 2WB1D 3S1RK 1TWAC 3PO3C 3SZZA 1K83C 5IP7C 2RGRA 1WQHA 4A3MK 3GEEA 4GTDA 3S1QK 4BY7K 1XXAA 2JA7C 5CHPA 3GSIA 1PJ7A 3H0GC 1O27A 3TFIA 4OIOA 2E2HA 4A3BK 1EFWA 3GTMA 1XZPB 1Y1WA 1VH2A 3N0CA 2GAHC 5EGEA 1TWAA 3S1NK 1TWCK 2EBBA 1K83A 3GTLK 1BS2A 3GTOA 2KWAA 4DDQA 4AH6A 4BBRK 3HOWK 2ZFZA 3TTGA 3TFJA 1O2AA 3GTGA 5C44C 1TWHA 4MQ9A 3H0GA 2R92A 3OEPA 4XSXA 2L3UA 3G4CA 4A3IK 4KATA 1WCMK 3M4OC 1PJ6A 1TWGA 4U67S 3FOFA 1VJEA 1F9NA 5L46A 4ILDA 1XPPA 2NVXK 3AQPA 1I50C 4C3IC 3BP8C 1B4BA 2A6EA 5IOTA 4C3JK 3GTQC 4BBSK 4A3KC 3QX3A 4IO9S 4IOAS 4WJ4A 5IP9C 2PA8L 3T00A 3FKIK
chains in the Genus database with same CATH topology
1Y1WK 2BE5A 4YFXA 5TMFA 2NVQC 2NVYC 1HQMA 3GTPC 3HOVC 1Y1VC 5C3EK 4A3CC 3PO2K 3S16C 1I3QC 3HOXK 4JK1A 4A3FK 4OIRA 4A93C 3S2DC 3DXJA 5IYDC 3GTOK 4AYBL 1R9TK 4Y7NC 4X6AC 2O5IA 1YNJA 1TWFK 5C4XK 4C3HK 5C44K 2PMZL 3GTGK 3GTKC 4A3JC 1I6VA 3RZDK 4QIWL 3S1RC 1TWCC 2A68A 2E2JK 1SMYA 3S14C 3GTLC 4KN4A 5C4JK 4A3DC 2NVTC 1TWHK 3GTJK 2E2IK 3HKZL 3HOWC 4BBRC 1YNNA 5M5WK 4BXXC 5C4JC 5M5XK 3HOZC 2R92K 2VUMC 2NVYK 4G7HA 4Y52K 2Y0SL 3M4OK 5FJ8K 3S2HK 5IYCC 2WAQD 2E2HC 3S1MC 4Q5SA 1TWGK 5IYBC 2JA5K 1I50K 3RZOC 4OIQA 3S17C 2YU9C 4BY1C 4C2MK 3I4MC 2JA8C 4C3IK 2JA6C 4A3IC 4A3BC 3I4NC 4A3JK 1WCMC 2WB1D 3S1RK 1TWAC 3PO3C 3GTQK 4A3KK 4XLNA 2NVTK 5M3FK 2B63K 1K83C 2CW0A 4XSZA 5IP7C 4A3MK 3S1QK 4BY7K 3H3VD 2R7ZK 3CQZK 2NVXC 2R93C 1SFOK 3S1NC 2JA7C 1IW7A 4A3LC 5IP9K 5FLMK 3K7AC 4C3JC 4QJVA 4MEXA 2NVQK 3S15C 3GTPK 3HOVK 3H0GC 4A3EC 1Y1VK 4A3CK 4OIOA 2WAQL 4A3GC 4QJVB 3S16K 1I3QK 4A3BK 5D4DA 3S2DK 3HOUC 4A93K 5IYDK 3GTMC 1Y1WC 4Y7NK 2O5JA 4X6AK 4LLGA 4YFKA 2WB1L 5C3EC 3GTKK 3S1NK 2JA7K 3PO2C 1TWCK 3S14K 3GTLK 3HOXC 3H3VL 4OINA 4A3DK 1ZYRA 3WODA 4BBRK 3HOWK 3GTOC 3M3YC 4BXXK 1R9TC 3HOZK 2VUMK 1TWFC 2A6HA 4G7ZA 5C4XC 4C3HC 5C44C 4A3GK 4LK0A 3GTGC 3RZDC 5IYCK 4ZH4A 4OIPA 2E2JC 4BBSC 3HOYC 1I6HC 2E2HK 3S1MK 2E2IC 4MQ9A 5IYBK 1TWHC 2A69A 3HOUK 4XSXA 4YFNA 2PA8D 4MEYA 1BDFA 3RZOK 2R92C 4LK1A 2YU9K 4BY1K 3S17K 3I4MK 2JA8K 2JA6K 4A3IK 4Y52C 3I4NK 4YG2A 1WCMK 3M4OC 1TWAK 3S2HC 3PO3K 3FKIC 4LJZA 1K83K 5IP7K 1TWGC 2JA5C 5M3MK 3M3YK 1XPPA 2NVXK 2R93K 1I50C 4C3IC 4Q4ZA 4NOIA 4AYBD 4C2MC 4A3LK 2A6EA 2PMZD 4A3FC 3K7AK 3GTQC 4XLPA 4C3JK 4A3KC 3HOYK 4BBSK 1I6HK 4QIWD 2B63C 4BY7C 3S15K 3S1QC 3EQLA 4A3MC 3H0GK 4A3EK 2R7ZC 3CQZC 2PPBA 3HKZD 5TMCA 1SFOC 4KMUA 4G7OA 4GZYA 5M5YK 5IP9C 2PA8L 5FLMC 2Y0SD 3FKIK 3GTJC 4KN7A 3GTMK
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1Y1W K;  2BE5 A;  4YFX A;  5TMF A;  2NVQ C;  2NVY C;  1HQM A;  3GTP C;  3HOV C;  1Y1V C;  5C3E K;  4A3C C;  3PO2 K;  3S16 C;  1I3Q C;  3HOX K;  4JK1 A;  4A3F K;  4OIR A;  4A93 C;  3S2D C;  3DXJ A;  5IYD C;  3GTO K;  4AYB L;  1R9T K;  4Y7N C;  4X6A C;  2O5I A;  1YNJ A;  1TWF K;  5C4X K;  4C3H K;  5C44 K;  2PMZ L;  3GTG K;  3GTK C;  4A3J C;  1I6V A;  3RZD K;  4QIW L;  3S1R C;  1TWC C;  2A68 A;  2E2J K;  1SMY A;  3S14 C;  3GTL C;  4KN4 A;  5C4J K;  4A3D C;  2NVT C;  1TWH K;  3GTJ K;  2E2I K;  3HKZ L;  3HOW C;  4BBR C;  1YNN A;  5M5W K;  4BXX C;  5C4J C;  5M5X K;  3HOZ C;  2R92 K;  2VUM C;  2NVY K;  4G7H A;  4Y52 K;  2Y0S L;  3M4O K;  5FJ8 K;  3S2H K;  5IYC C;  2WAQ D;  2E2H C;  3S1M C;  4Q5S A;  1TWG K;  5IYB C;  2JA5 K;  1I50 K;  3RZO C;  4OIQ A;  3S17 C;  2YU9 C;  4BY1 C;  4C2M K;  3I4M C;  2JA8 C;  4C3I K;  2JA6 C;  4A3I C;  4A3B C;  3I4N C;  4A3J K;  1WCM C;  2WB1 D;  3S1R K;  1TWA C;  3PO3 C;  3GTQ K;  4A3K K;  4XLN A;  2NVT K;  5M3F K;  2B63 K;  1K83 C;  2CW0 A;  4XSZ A;  5IP7 C;  4A3M K;  3S1Q K;  4BY7 K;  3H3V D;  2R7Z K;  3CQZ K;  2NVX C;  2R93 C;  1SFO K;  3S1N C;  2JA7 C;  1IW7 A;  4A3L C;  5IP9 K;  5FLM K;  3K7A C;  4C3J C;  4QJV A;  4MEX A;  2NVQ K;  3S15 C;  3GTP K;  3HOV K;  3H0G C;  4A3E C;  1Y1V K;  4A3C K;  4OIO A;  2WAQ L;  4A3G C;  4QJV B;  3S16 K;  1I3Q K;  4A3B K;  5D4D A;  3S2D K;  3HOU C;  4A93 K;  5IYD K;  3GTM C;  1Y1W C;  4Y7N K;  2O5J A;  4X6A K;  4LLG A;  4YFK A;  2WB1 L;  5C3E C;  3GTK K;  3S1N K;  2JA7 K;  3PO2 C;  1TWC K;  3S14 K;  3GTL K;  3HOX C;  3H3V L;  4OIN A;  4A3D K;  1ZYR A;  3WOD A;  4BBR K;  3HOW K;  3GTO C;  3M3Y C;  4BXX K;  1R9T C;  3HOZ K;  2VUM K;  1TWF C;  2A6H A;  4G7Z A;  5C4X C;  4C3H C;  5C44 C;  4A3G K;  4LK0 A;  3GTG C;  3RZD C;  5IYC K;  4ZH4 A;  4OIP A;  2E2J C;  4BBS C;  3HOY C;  1I6H C;  2E2H K;  3S1M K;  2E2I C;  4MQ9 A;  5IYB K;  1TWH C;  2A69 A;  3HOU K;  4XSX A;  4YFN A;  2PA8 D;  4MEY A;  1BDF A;  3RZO K;  2R92 C;  4LK1 A;  2YU9 K;  4BY1 K;  3S17 K;  3I4M K;  2JA8 K;  2JA6 K;  4A3I K;  4Y52 C;  3I4N K;  4YG2 A;  1WCM K;  3M4O C;  1TWA K;  3S2H C;  3PO3 K;  3FKI C;  4LJZ A;  1K83 K;  5IP7 K;  1TWG C;  2JA5 C;  5M3M K;  3M3Y K;  1XPP A;  2NVX K;  2R93 K;  1I50 C;  4C3I C;  4Q4Z A;  4NOI A;  4AYB D;  4C2M C;  4A3L K;  2A6E A;  2PMZ D;  4A3F C;  3K7A K;  3GTQ C;  4XLP A;  4C3J K;  4A3K C;  3HOY K;  4BBS K;  1I6H K;  4QIW D;  2B63 C;  4BY7 C;  3S15 K;  3S1Q C;  3EQL A;  4A3M C;  3H0G K;  4A3E K;  2R7Z C;  3CQZ C;  2PPB A;  3HKZ D;  5TMC A;  1SFO C;  4KMU A;  4G7O A;  4GZY A;  5M5Y K;  5IP9 C;  2PA8 L;  5FLM C;  2Y0S D;  3FKI K;  3GTJ C;  4KN7 A;  3GTM K; 
#chains in the Genus database with same CATH topology
 2CFA B;  4YFX A;  5TMF A;  1EQR A;  5C3E K;  1DCH A;  1I3Q C;  3PIP S;  4A3F K;  4OIR A;  2FQO A;  4WF9 S;  3DXJ A;  5IYD C;  4X6A C;  1TWF K;  4C3H K;  1WSR A;  1BGW A;  3GTQ A;  1I6V A;  3A8J A;  3GTL A;  1JVI A;  2E2J K;  2E2I K;  4A3D C;  3N3Y A;  5M5W K;  3TFH A;  1IQ0 A;  2JH3 A;  2NVY K;  4G7H A;  4KMH A;  1WOO A;  2RH6 A;  1O2B A;  1XZQ B;  5IYC C;  4BLA A;  4P9S A;  3HXA A;  2XCO A;  1KQ4 A;  5IOS A;  4C2M K;  3I4M C;  3FHZ A;  4WFN S;  1G51 A;  4XLN A;  4BKW A;  2B63 K;  2CW0 A;  2NVX A;  3H3V D;  4KAR A;  1SFO K;  4FM9 A;  3K7A C;  4MEX A;  1UV7 A;  4LQY A;  2NVQ K;  3S15 C;  1INN A;  3GTP K;  5DM6 S;  3HOV K;  4A3C K;  4A3G C;  3BUE A;  3ERE D;  4QJV B;  2D6F C;  3S16 K;  1ZXO A;  3S2D K;  3HOU C;  3GTM C;  1Y1W C;  2O5J A;  3OPF A;  2WB1 L;  4GTC A;  2ZUE A;  4GTB A;  4G0V A;  2JA7 K;  3PO2 C;  1EI6 A;  2ZJQ S;  1JQW A;  3WOD A;  3GTO C;  3M3Y C;  1TWF A;  1J6X A;  5TJ3 A;  2GSO A;  4J3N A;  4C45 A;  3NUH A;  3HOZ K;  5JVH S;  1IL2 A;  4KC6 A;  4LK0 A;  3GTG C;  2E2I A;  3HOY C;  5IOQ A;  5IYB K;  1TWH C;  2A69 A;  4WCE S;  4YFN A;  3RZO K;  2R92 C;  2YU9 K;  3VA7 A;  4YG2 A;  1ISE A;  3S2H C;  1VRQ C;  1TWG C;  1O29 A;  2R93 K;  4KB2 A;  1O25 A;  4NOI A;  4AYB D;  4KAS A;  4A3L K;  1F7V A;  2B63 A;  3PIO S;  4M1X A;  4QIW D;  4BY7 C;  3AH5 A;  3S1Q C;  3EQL A;  4A3M C;  1SFO A;  4A3E K;  1O26 A;  3HKZ D;  4GTE A;  4KMU A;  3GTJ A;  1DCO A;  4KM9 A;  3L4J A;  1VLO A;  5C4J C;  3GTP A;  2ZJR S;  2Y3P A;  1HQM A;  3GEI A;  3CF5 S;  1AB4 A;  3HOX K;  4JK1 A;  3MML B;  1R9T K;  5C4X K;  3L4K A;  4A3J C;  3RZD K;  1TWC C;  1SMY A;  3GTL C;  4KN4 A;  4P5A A;  2NVT C;  4KM8 A;  3HOW C;  4BBR C;  1YNN A;  1YCL A;  1O24 A;  4Y52 K;  2WAQ D;  5HQH A;  2JA5 K;  1EH1 A;  2YU9 A;  4OIQ A;  4GTA A;  3GDZ A;  4A3I C;  1WCM C;  5DM7 S;  4XSZ A;  2KXY A;  2R7Z K;  3CQZ K;  2NVX C;  1TWC A;  4KDD A;  1IW7 A;  5FLM K;  4C3J C;  1J98 A;  1Y1V K;  1F93 A;  4FZB A;  3GIR A;  5D4D A;  4GTF A;  4A93 K;  4Y7N K;  4PAA A;  4LLG A;  5C3E C;  1WCM A;  3GTK K;  3AD9 C;  3S14 K;  2KPU A;  3H3V L;  4OIN A;  1YX2 A;  1R9T A;  4BXX K;  2VUM K;  1TWF C;  2A6H A;  4C3H C;  4A3G K;  3IPJ A;  2E2J C;  1I6H C;  1HI9 A;  1J6W A;  2E2H K;  3S1M K;  2E2I C;  3HOU K;  1L0W A;  4MEY A;  1BDF A;  4LK1 A;  3S17 K;  4BY1 K;  2JA8 K;  2JA6 K;  3I4N K;  3FKI A;  1TWA K;  3PO3 K;  4LJZ A;  1J6V A;  2JA5 A;  4BLB A;  1FEU A;  1K83 K;  5IP7 K;  3M3Y K;  2PHC B;  3G4A A;  2GSU A;  4XCH A;  4Q4Z A;  4C2M C;  2PMZ D;  3FOE A;  4XLP A;  3ORE A;  2V6T A;  2B63 C;  2R7Z A;  1WOP A;  2GSN A;  3H0G K;  4LOW A;  5JFE A;  2PPB A;  1SFO C;  1IE0 A;  1B4A A;  1VGX A;  5M5Y K;  2Y0S D;  4KN7 A;  3GTJ C;  2BE5 A;  3AD7 C;  2NVY A;  2NVQ C;  1Y1V A;  4G0U A;  4O2D A;  3GTP C;  3HOV C;  4A3C C;  4G0W A;  3T01 A;  3S16 C;  2W7V A;  1WIH A;  3S2D C;  4AYB L;  5JVO A;  2O5I A;  1YNJ A;  3GTK A;  5C44 K;  1PJ5 A;  2XCR B;  4GT9 A;  1EK8 A;  3S1R C;  4QIW L;  5C4J K;  1DD5 A;  3HKZ L;  2VUM A;  1XZQ A;  5M5X K;  4WFA S;  4KB4 A;  3HOZ C;  1USO A;  3M4O K;  1USM A;  1XXB A;  5HL7 S;  1IBA A;  4Q5S A;  5IYB C;  5HL8 A;  1I50 K;  2JA6 A;  3RZO C;  3SZY A;  2YU9 C;  4C3I K;  4A3B C;  3DLL S;  4P5B A;  4A3J K;  5E68 A;  3GTQ K;  4A3K K;  2GAG C;  2NVT K;  5M3F K;  1BJT A;  2R93 C;  2JA7 A;  3S1N C;  4A3L C;  5IP9 K;  1IS1 A;  3GEH A;  4QJV A;  3Q3Q A;  4A3E C;  3AQO A;  2KQ1 A;  4KMD A;  2WAQ L;  1I3Q K;  3ADA C;  2L5N A;  5IYD K;  3AD8 C;  4X6A K;  5JVG S;  4YFK A;  3LAP A;  4GTL A;  4KMA A;  3HOX C;  4A3D K;  3V4G A;  3LAJ A;  1ZYR A;  2R93 A;  1GE9 A;  1R9T C;  2V6U A;  1RU0 A;  2V6S A;  4G7Z A;  5C4X C;  3JST A;  4PAB A;  4GFQ A;  3RZD C;  1WQG A;  5IYC K;  4ZH4 A;  4OIP A;  4IOC S;  4BBS C;  3LYW A;  4WIL A;  1X31 C;  2PA8 D;  1XZP A;  3A8K A;  3I4M K;  4Y52 C;  3FKI C;  5CJ9 A;  1XXC A;  2XCQ A;  2JA5 C;  5M3M K;  1I50 A;  1F7U A;  3S0X A;  2ZJP S;  2P5M A;  1O28 A;  1WOR A;  4A3F C;  3K7A K;  1I6H K;  3S15 K;  2R7Z C;  3CQZ C;  1WOS A;  5TMC A;  3CAG A;  3BP3 A;  4KAW X;  4G7O A;  4GZY A;  5FLM C;  4WJ3 M;  3GTM K;  1Y1W K;  1ZBS A;  2NVY C;  1Y1V C;  1I3Q A;  4LR2 A;  3PO2 K;  3T02 A;  5IOR A;  3LPX A;  3A8I A;  1V5V A;  4A93 C;  1DCP A;  3GTO K;  2FQT A;  4Y7N C;  1O2F B;  2PMZ L;  3GTG K;  3GTK C;  4RMF A;  2A68 A;  3HOY K;  3S14 C;  1TWH K;  3GTJ K;  3CQZ A;  1JOE A;  4BXX C;  2R92 K;  2VUM C;  2CFA A;  1C0A A;  2Y0S L;  2P8T A;  1WSV A;  5FJ8 K;  3S2H K;  1WQF A;  2E2H C;  3S1M C;  1TWG K;  4WFB S;  2ZUF A;  1ZVU A;  3S17 C;  4BY1 C;  2JA8 C;  2JA6 C;  3N0B A;  1ZQ1 C;  3I4N C;  5EGH A;  2WB1 D;  3S1R K;  1TWA C;  3PO3 C;  3SZZ A;  1K83 C;  5IP7 C;  2RGR A;  1WQH A;  4A3M K;  3GEE A;  4GTD A;  3S1Q K;  4BY7 K;  1XXA A;  2JA7 C;  5CHP A;  3GSI A;  1PJ7 A;  3H0G C;  1O27 A;  3TFI A;  4OIO A;  2E2H A;  4A3B K;  1EFW A;  3GTM A;  1XZP B;  1Y1W A;  1VH2 A;  3N0C A;  2GAH C;  5EGE A;  1TWA A;  3S1N K;  1TWC K;  2EBB A;  1K83 A;  3GTL K;  1BS2 A;  3GTO A;  2KWA A;  4DDQ A;  4AH6 A;  4BBR K;  3HOW K;  2ZFZ A;  3TTG A;  3TFJ A;  1O2A A;  3GTG A;  5C44 C;  1TWH A;  4MQ9 A;  3H0G A;  2R92 A;  3OEP A;  4XSX A;  2L3U A;  3G4C A;  4A3I K;  4KAT A;  1WCM K;  3M4O C;  1PJ6 A;  1TWG A;  4U67 S;  3FOF A;  1VJE A;  1F9N A;  5L46 A;  4ILD A;  1XPP A;  2NVX K;  3AQP A;  1I50 C;  4C3I C;  3BP8 C;  1B4B A;  2A6E A;  5IOT A;  4C3J K;  3GTQ C;  4BBS K;  4A3K C;  3QX3 A;  4IO9 S;  4IOA S;  4WJ4 A;  5IP9 C;  2PA8 L;  3T00 A;  3FKI K; 
#chains in the Genus database with same CATH homology
 1Y1W K;  2BE5 A;  4YFX A;  5TMF A;  2NVQ C;  2NVY C;  1HQM A;  3GTP C;  3HOV C;  1Y1V C;  5C3E K;  4A3C C;  3PO2 K;  3S16 C;  1I3Q C;  3HOX K;  4JK1 A;  4A3F K;  4OIR A;  4A93 C;  3S2D C;  3DXJ A;  5IYD C;  3GTO K;  4AYB L;  1R9T K;  4Y7N C;  4X6A C;  2O5I A;  1YNJ A;  1TWF K;  5C4X K;  4C3H K;  5C44 K;  2PMZ L;  3GTG K;  3GTK C;  4A3J C;  1I6V A;  3RZD K;  4QIW L;  3S1R C;  1TWC C;  2A68 A;  2E2J K;  1SMY A;  3S14 C;  3GTL C;  4KN4 A;  5C4J K;  4A3D C;  2NVT C;  1TWH K;  3GTJ K;  2E2I K;  3HKZ L;  3HOW C;  4BBR C;  1YNN A;  5M5W K;  4BXX C;  5C4J C;  5M5X K;  3HOZ C;  2R92 K;  2VUM C;  2NVY K;  4G7H A;  4Y52 K;  2Y0S L;  3M4O K;  5FJ8 K;  3S2H K;  5IYC C;  2WAQ D;  2E2H C;  3S1M C;  4Q5S A;  1TWG K;  5IYB C;  2JA5 K;  1I50 K;  3RZO C;  4OIQ A;  3S17 C;  2YU9 C;  4BY1 C;  4C2M K;  3I4M C;  2JA8 C;  4C3I K;  2JA6 C;  4A3I C;  4A3B C;  3I4N C;  4A3J K;  1WCM C;  2WB1 D;  3S1R K;  1TWA C;  3PO3 C;  3GTQ K;  4A3K K;  4XLN A;  2NVT K;  5M3F K;  2B63 K;  1K83 C;  2CW0 A;  4XSZ A;  5IP7 C;  4A3M K;  3S1Q K;  4BY7 K;  3H3V D;  2R7Z K;  3CQZ K;  2NVX C;  2R93 C;  1SFO K;  3S1N C;  2JA7 C;  1IW7 A;  4A3L C;  5IP9 K;  5FLM K;  3K7A C;  4C3J C;  4QJV A;  4MEX A;  2NVQ K;  3S15 C;  3GTP K;  3HOV K;  3H0G C;  4A3E C;  1Y1V K;  4A3C K;  4OIO A;  2WAQ L;  4A3G C;  4QJV B;  3S16 K;  1I3Q K;  4A3B K;  5D4D A;  3S2D K;  3HOU C;  4A93 K;  5IYD K;  3GTM C;  1Y1W C;  4Y7N K;  2O5J A;  4X6A K;  4LLG A;  4YFK A;  2WB1 L;  5C3E C;  3GTK K;  3S1N K;  2JA7 K;  3PO2 C;  1TWC K;  3S14 K;  3GTL K;  3HOX C;  3H3V L;  4OIN A;  4A3D K;  1ZYR A;  3WOD A;  4BBR K;  3HOW K;  3GTO C;  3M3Y C;  4BXX K;  1R9T C;  3HOZ K;  2VUM K;  1TWF C;  2A6H A;  4G7Z A;  5C4X C;  4C3H C;  5C44 C;  4A3G K;  4LK0 A;  3GTG C;  3RZD C;  5IYC K;  4ZH4 A;  4OIP A;  2E2J C;  4BBS C;  3HOY C;  1I6H C;  2E2H K;  3S1M K;  2E2I C;  4MQ9 A;  5IYB K;  1TWH C;  2A69 A;  3HOU K;  4XSX A;  4YFN A;  2PA8 D;  4MEY A;  1BDF A;  3RZO K;  2R92 C;  4LK1 A;  2YU9 K;  4BY1 K;  3S17 K;  3I4M K;  2JA8 K;  2JA6 K;  4A3I K;  4Y52 C;  3I4N K;  4YG2 A;  1WCM K;  3M4O C;  1TWA K;  3S2H C;  3PO3 K;  3FKI C;  4LJZ A;  1K83 K;  5IP7 K;  1TWG C;  2JA5 C;  5M3M K;  3M3Y K;  1XPP A;  2NVX K;  2R93 K;  1I50 C;  4C3I C;  4Q4Z A;  4NOI A;  4AYB D;  4C2M C;  4A3L K;  2A6E A;  2PMZ D;  4A3F C;  3K7A K;  3GTQ C;  4XLP A;  4C3J K;  4A3K C;  3HOY K;  4BBS K;  1I6H K;  4QIW D;  2B63 C;  4BY7 C;  3S15 K;  3S1Q C;  3EQL A;  4A3M C;  3H0G K;  4A3E K;  2R7Z C;  3CQZ C;  2PPB A;  3HKZ D;  5TMC A;  1SFO C;  4KMU A;  4G7O A;  4GZY A;  5M5Y K;  5IP9 C;  2PA8 L;  5FLM C;  2Y0S D;  3FKI K;  3GTJ C;  4KN7 A;  3GTM K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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