5IP9C

Structure of rna polymerase ii-tfiif complex
Total Genus 61
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
61
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Transcription initiation complex structures elucidate DNA opening.
pubmed doi rcsb
source organism Saccharomyces cerevisiae
molecule tags Transcription
total genus 61
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2016-03-09

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 5ip9C02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 5ip9C01
3H0GK 5M5WK 1TWHK 3GTMC 4Y7NK 1TWFC 2A6HA 4LLGA 1TWGC 5TMFA 4C3HC 5IP7C 4A3MC 2O5IA 5C3EC 4OIPA 4C2MK 5M3MK 5M5XK 3HOXK 2JA8K 4A3KK 3GTKC 1I50K 2A6EA 4A3BC 3HOUK 2PA8D 5D4DA 3M4OK 1R9TC 5C44K 2R93C 4A3LK 3S2DK 3S14K 3CQZC 4OIRA 1I6HC 2Y0SD 1I3QK 3GTJC 3I4MK 2E2HC 3I4NK 4A3IC 5IP9K 4MEXA 1I6VA 1WCMK 3GTPC 4JK1A 4OIOA 1SMYA 1SFOC 2R7ZK 3S1MC 4A3DK 4BBRC 1Y1VK 3HOVK 2WB1D 4A3KC 1I50C 2E2JC 3HOYC 4A3JC 4KN7A 5IYDK 3S1QK 4C3IK 2R92K 4X6AK 4A3LC 3S2DC 4YFKA 1I3QC 4Y52C 4A3CK 4BBSC 1YNJA 1Y1WC 3PO2C 5IP9C 3FKIK 2JA6C 3RZOK 4NOIA 2NVQC 2WAQL 5C4XC 5C4JC 4QIWD 4A3EC 2R7ZC 4XSZA 4MEYA 3S16C 3GTQK 4A3FK 2B63K 4XLNA 3HOVC 3S1RK 4A3GK 4A3MK 4MQ9A 2CW0A 3PO3C 1K83C 4BXXC 3HKZL 3RZDK 4A3CC 3H0GC 5FLMK 4QJVA 4LJZA 1TWHC 4Y7NC 3S17K 3S2HK 4C2MC 3FKIC 3S15K 3GTGK 4AYBL 3HOZK 3HOXC 4GZYA 2JA8C 2E2IK 4BY1K 3M3YK 4BY7K 1TWCK 5M3FK 3HOUC 3M4OC 3HOWK 2PMZL 1HQMA 5IYBK 5C44C 5IYCK 1YNNA 2JA7K 4G7HA 3S14C 2VUMK 3I4MC 3GTOK 2O5JA 3I4NC 2YU9K 1WCMC 2NVTK 4A93K 4KN4A 4ZH4A 3GTMK 4A3DC 3GTGC 1Y1VC 3HOZC 2WAQD 4BY1C 1TWFK 1TWGK 4C3JK 4C3HK 5C3EK 5IP7K 2NVXK 3EQLA 5M5YK 4XLPA 4OINA 5IYDC 4OIQA 3HOWC 4C3IC 3S1QC 2R92C 4X6AC 4G7ZA 1TWAK 3H3VL 2NVYK 1R9TK 2BE5A 2JA7C 4YFXA 2VUMC 2JA5K 1XPPA 3WODA 3S1NK 3CQZK 3HKZD 3GTJK 2E2HK 2A69A 3RZOC 4A3IK 3GTLK 1IW7A 3GTPK 4YFNA 4YG2A 4AYBD 1ZYRA 4Q4ZA 1BDFA 3GTQC 1SFOK 4A3FC 4C3JC 2B63C 3S1RC 4A3GC 4QIWL 2NVXC 2PA8L 4BBRK 2PPBA 2PMZD 2E2JK 4QJVB 3HOYK 1TWAC 4A3JK 3K7AK 4Q5SA 2NVYC 2Y0SL 2JA5C 4XSXA 3RZDC 5FLMC 3S1NC 5TMCA 4Y52K 3S17C 3S2HC 3S15C 4BBSK 1Y1WK 3PO2K 2E2IC 3M3YC 2JA6K 3GTLC 4BY7C 1TWCC 2NVQK 5C4XK 2WB1L 5C4JK 4A3BK 5IYBC 4A3EK 5IYCC 3S16K 3GTOC 2R93K 4KMUA 3H3VD 3S1MK 1I6HK 2YU9C 4LK0A 4LK1A 3K7AC 4G7OA 3GTKK 2A68A 3PO3K 1K83K 4BXXK 2NVTC 5FJ8K 4A93C 3DXJA
chains in the Genus database with same CATH superfamily
5M5WK 1SFOA 4LLGA 5IP7C 2KQ1A 3M4OK 1R9TC 2V6TA 4A3LK 1J6WA 3S14K 5HL7S 1I3QK 2E2HC 1WIHA 4IOCS 1O27A 1Y1VK 4WJ4A 1ZXOA 5IYDK 3S1QK 2R92K 4X6AK 4WJ3M 3H0GA 4YFKA 4KATA 3L4KA 3Q3QA 3PO2C 3FKIK 2JA6C 3AD7C 4A3EC 4WILA 5E68A 4FM9A 3S16C 3JSTA 3OREA 3S1RK 5EGEA 3TFJA 4MQ9A 1K83C 4A3CC 1TWHC 2L5NA 3S17K 3S2HK 3S15K 1B4BA 5IOTA 1HI9A 4GZYA 5L46A 4P9SA 3N0BA 3ERED 3GIRA 2PMZL 1HQMA 5DM6S 5IYCK 2FQOA 3N0CA 3N3YA 3GTOK 1F7VA 3I4NC 2XCOA 5JVOA 4ZH4A 4A3DC 3GTGC 4BKWA 5IP7K 3EQLA 5M5YK 4OINA 1YX2A 2NVYK 1R9TK 2BE5A 2JA7C 2VUMC 2JA5K 3S1NK 5JFEA 2E2HK 4WFAS 3RZOC 2GAGC 1VLOA 3GTQC 4Q4ZA 4QIWL 4WFNS 2NVXC 2PPBA 2PMZD 1RU0A 3G4CA 4PABA 1TWAC 2CFAA 2ZUFA 2Y0SL 1WOSA 1O28A 1IL2A 3PIPS 1GE9A 1USOA 4KAWX 1WORA 3PO2K 2E2IC 2JA6K 4BY7C 1TWCC 5IYBC 4A3EK 3IPJA 1WOPA 1ZBSA 3S16K 4J3NA 3CQZA 2R93K 3GTJA 4LR2A 5JVGS 2YU9C 3K7AC 2A68A 1K83K 3GTPA 4A3CK 1EK8A 1IBAA 1TWHK 1TWGC 5TMFA 3S1MK 1JOEA 1VH2A 4OIPA 4A3KK 1I50K 2A6EA 4A3BC 1AB4A 2Y3PA 3S2DK 1I3QA 2KPUA 4DDQA 3LAJA 3CF5S 2Y0SD 1I6HC 1Y1WA 3I4NK 1F93A 5EGHA 3T00A 4OIOA 1SMYA 1SFOC 2R7ZK 4A3DK 3HOVK 1XZQA 3A8KA 1IE0A 2JH3A 3FKIA 5IP9C 3RZOK 2NVQC 3BP8C 3GTQK 1XZPA 1WCMA 1XXAA 1WOOA 3HKZL 3HXAA 4LOWA 2RGRA 3H0GC 1X31C 4KB4A 4PAAA 4Y7NC 4C2MC 1WQHA 3HOZK 3HOXC 2JA8C 2E2IK 4BY7K 2ZJRS 1G51A 1TWCK 3HOUC 5IYBK 1YNNA 1B4AA 3I4MC 2O5JA 5TJ3A 2YU9K 4G0WA 1O25A 2EBBA 3V4GA 4KMDA 2B63A 1TWGK 4BY1C 1UV7A 4G0VA 3TFHA 3HOWC 4OIQA 4C3IC 2NVYA 2JA5A 1PJ7A 3FOFA 2GSUA 3HKZD 1JVIA 3GTLK 2P8TA 1ZYRA 3TTGA 1SFOK 4C3JC 3LYWA 4A3GC 2PA8L 2RH6A 4QJVB 4KM9A 1BS2A 3SZZA 2ZJPS 3LPXA 5CHPA 4XSXA 3RZDC 4IO9S 5FLMC 1J98A 3NUHA 5TMCA 3GTMA 1TWFA 1IS1A 3GTKA 2NVQK 4GTAA 2WB1L 2W7VA 2R93A 1PJ6A 2XCRB 2FQTA 4GTCA 4LK0A 4LK1A 4BLBA 3QX3A 2NVTC 4KM8A 3DXJA 4BLAA 1YCLA 3H0GK 3MMLB 4Y7NK 3AQPA 3AQOA 4A3MC 4C2MK 5M3MK 3AD9C 5M5XK 5CJ9A 1I50A 3HOXK 2JA8K 4KARA 4KC6A 3HOUK 2PA8D 5D4DA 2GSOA 1DCPA 2V6UA 3CQZC 3I4MK 4G0UA 3GTJC 1O29A 1VGXA 4GTDA 1I6VA 1JQWA 2KXYA 3GTPC 2R7ZA 1KQ4A 3TFIA 4BBRC 2PHCB 2WB1D 3CAGA 3HOYC 4GT9A 4C3IK 4GFQA 3FOEA 4A3LC 4WF9S 3A8IA 1WSVA 3PIOS 1I3QC 1Y1WC 1F9NA 4NOIA 2GAHC 5C4JC 4QIWD 4XSZA 4MEYA 4A3GK 3PO3C 5IOQA 3RZDK 5FLMK 3GEEA 3BUEA 4LJZA 2P5MA 1Y1VA 3FKIC 3GTGK 4KB2A 5M3FK 5DM7S 2R92A 5C44C 1EI6A 2JA7K 4G7HA 2VUMK 3DLLS 3T01A 4GTLA 1WCMC 2NVTK 4GTFA 4A3MK 1F7UA 4M1XA 2NVXK 4FZBA 4XLPA 4KDDA 1TWAK 3T02A 3L4JA 1O2FB 4YFXA 1XPPA 3WODA 1EH1A 2XCQA 3CQZK 3GTJK 1XXBA 3GTLA 2ZFZA 3GTPK 4YFNA 4YG2A 4A3FC 2B63C 3GTOA 1WSRA 4BBRK 3FHZA 3HOYK 3G4AA 3K7AK 4Q5SA 2NVYC 3GEHA 2JA5C 1DCOA 2KWAA 3S1NC 2L3UA 5HQHA 1C0AA 3AD8C 4RMFA 1Y1WK 3M3YC 3BP3A 1EFWA 1BJTA 1V5VA 5C4JK 1R9TA 4A3BK 1FEUA 2E2HA 3A8JA 1I6HK 4G7OA 1EQRA 3PO3K 4A93C 1O24A 3GTMC 1TWFC 2A6HA 2O5IA 4ILDA 5FJ8K 4C3HC 5C3EC 3GTKC 4P5AA 4KMAA 1IQ0A 5C44K 2R93C 4OIRA 5IORA 3GSIA 1VJEA 2JA6A 4A3IC 1WQFA 1DD5A 4MEXA 3GEIA 3GDZA 5IP9K 1BGWA 1WCMK 4JK1A 2CFAB 4C45A 3S1MC 4A3KC 2E2JC 1I50C 1WQGA 4A3JC 4KN7A 1VRQC 1K83A 4WCES 3S2DC 1TWHA 4Y52C 1ISEA 4BBSC 1YNJA 1INNA 4XCHA 4KMHA 2WAQL 5C4XC 1USMA 2R7ZC 2D6FC 4A3FK 2B63K 4XLNA 3HOVC 2CW0A 2ZJQS 2GSNA 4KASA 4BXXC 5JVHS 4AH6A 4QJVA 1J6XA 4WFBS 3GTGA 4P5BA 4AYBL 4BY1K 3S0XA 3M3YK 3M4OC 4O2DA 3VA7A 3HOWK 2ZUEA 3SZYA 2VUMA 2JA7A 1L0WA 5HL8A 3S14C 5IOSA 3AH5A 4A93K 4KN4A 3GTQA 1DCHA 3GTMK 1TWFK 1Y1VC 3HOZC 2WAQD 1PJ5A 4C3JK 4C3HK 2NVXA 1XZQB 5C3EK 1TWAA 3LAPA 3GTKK 5IYDC 3S1QC 1O2AA 2R92C 4X6AC 4G7ZA 3H3VL 4IOAS 1J6VA 4GTBA 2A69A 2E2IA 4A3IK 1TWCA 1ZQ1C 2V6SA 4U67S 1XZPB 1IW7A 3OEPA 4AYBD 1BDFA 3OPFA 3ADAC 3S1RC 2E2JK 2YU9A 4A3JK 4GTEA 1O2BA 1XXCA 4LQYA 4Y52K 3S17C 3S2HC 3S15C 1TWGA 4BBSK 1ZVUA 3GTLC 5C4XK 1O26A 5IYCC 3GTOC 4KMUA 3H3VD 4BXXK
chains in the Genus database with same CATH topology
3H0GK 5M5WK 1TWHK 3GTMC 4Y7NK 1TWFC 2A6HA 4LLGA 1TWGC 5TMFA 4C3HC 5IP7C 4A3MC 2O5IA 5C3EC 4OIPA 4C2MK 5M3MK 5M5XK 3HOXK 2JA8K 4A3KK 3GTKC 1I50K 2A6EA 4A3BC 3HOUK 2PA8D 5D4DA 3M4OK 1R9TC 5C44K 2R93C 4A3LK 3S2DK 3S14K 3CQZC 4OIRA 1I6HC 2Y0SD 1I3QK 3GTJC 3I4MK 2E2HC 3I4NK 4A3IC 5IP9K 4MEXA 1I6VA 1WCMK 3GTPC 4JK1A 4OIOA 1SMYA 1SFOC 2R7ZK 3S1MC 4A3DK 4BBRC 1Y1VK 3HOVK 2WB1D 4A3KC 1I50C 2E2JC 3HOYC 4A3JC 4KN7A 5IYDK 3S1QK 4C3IK 2R92K 4X6AK 4A3LC 3S2DC 4YFKA 1I3QC 4Y52C 4A3CK 4BBSC 1YNJA 1Y1WC 3PO2C 5IP9C 3FKIK 2JA6C 3RZOK 4NOIA 2NVQC 2WAQL 5C4XC 5C4JC 4QIWD 4A3EC 2R7ZC 4XSZA 4MEYA 3S16C 3GTQK 4A3FK 2B63K 4XLNA 3HOVC 3S1RK 4A3GK 4A3MK 4MQ9A 2CW0A 3PO3C 1K83C 4BXXC 3HKZL 3RZDK 4A3CC 3H0GC 5FLMK 4QJVA 4LJZA 1TWHC 4Y7NC 3S17K 3S2HK 4C2MC 3FKIC 3S15K 3GTGK 4AYBL 3HOZK 3HOXC 4GZYA 2JA8C 2E2IK 4BY1K 3M3YK 4BY7K 1TWCK 5M3FK 3HOUC 3M4OC 3HOWK 2PMZL 1HQMA 5IYBK 5C44C 5IYCK 1YNNA 2JA7K 4G7HA 3S14C 2VUMK 3I4MC 3GTOK 2O5JA 3I4NC 2YU9K 1WCMC 2NVTK 4A93K 4KN4A 4ZH4A 3GTMK 4A3DC 3GTGC 1Y1VC 3HOZC 2WAQD 4BY1C 1TWFK 1TWGK 4C3JK 4C3HK 5C3EK 5IP7K 2NVXK 3EQLA 5M5YK 4XLPA 4OINA 5IYDC 4OIQA 3HOWC 4C3IC 3S1QC 2R92C 4X6AC 4G7ZA 1TWAK 3H3VL 2NVYK 1R9TK 2BE5A 2JA7C 4YFXA 2VUMC 2JA5K 1XPPA 3WODA 3S1NK 3CQZK 3HKZD 3GTJK 2E2HK 2A69A 3RZOC 4A3IK 3GTLK 1IW7A 3GTPK 4YFNA 4YG2A 4AYBD 1ZYRA 4Q4ZA 1BDFA 3GTQC 1SFOK 4A3FC 4C3JC 2B63C 3S1RC 4A3GC 4QIWL 2NVXC 2PA8L 4BBRK 2PPBA 2PMZD 2E2JK 4QJVB 3HOYK 1TWAC 4A3JK 3K7AK 4Q5SA 2NVYC 2Y0SL 2JA5C 4XSXA 3RZDC 5FLMC 3S1NC 5TMCA 4Y52K 3S17C 3S2HC 3S15C 4BBSK 1Y1WK 3PO2K 2E2IC 3M3YC 2JA6K 3GTLC 4BY7C 1TWCC 2NVQK 5C4XK 2WB1L 5C4JK 4A3BK 5IYBC 4A3EK 5IYCC 3S16K 3GTOC 2R93K 4KMUA 3H3VD 3S1MK 1I6HK 2YU9C 4LK0A 4LK1A 3K7AC 4G7OA 3GTKK 2A68A 3PO3K 1K83K 4BXXK 2NVTC 5FJ8K 4A93C 3DXJA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3H0G K;  5M5W K;  1TWH K;  3GTM C;  4Y7N K;  1TWF C;  2A6H A;  4LLG A;  1TWG C;  5TMF A;  4C3H C;  5IP7 C;  4A3M C;  2O5I A;  5C3E C;  4OIP A;  4C2M K;  5M3M K;  5M5X K;  3HOX K;  2JA8 K;  4A3K K;  3GTK C;  1I50 K;  2A6E A;  4A3B C;  3HOU K;  2PA8 D;  5D4D A;  3M4O K;  1R9T C;  5C44 K;  2R93 C;  4A3L K;  3S2D K;  3S14 K;  3CQZ C;  4OIR A;  1I6H C;  2Y0S D;  1I3Q K;  3GTJ C;  3I4M K;  2E2H C;  3I4N K;  4A3I C;  5IP9 K;  4MEX A;  1I6V A;  1WCM K;  3GTP C;  4JK1 A;  4OIO A;  1SMY A;  1SFO C;  2R7Z K;  3S1M C;  4A3D K;  4BBR C;  1Y1V K;  3HOV K;  2WB1 D;  4A3K C;  1I50 C;  2E2J C;  3HOY C;  4A3J C;  4KN7 A;  5IYD K;  3S1Q K;  4C3I K;  2R92 K;  4X6A K;  4A3L C;  3S2D C;  4YFK A;  1I3Q C;  4Y52 C;  4A3C K;  4BBS C;  1YNJ A;  1Y1W C;  3PO2 C;  5IP9 C;  3FKI K;  2JA6 C;  3RZO K;  4NOI A;  2NVQ C;  2WAQ L;  5C4X C;  5C4J C;  4QIW D;  4A3E C;  2R7Z C;  4XSZ A;  4MEY A;  3S16 C;  3GTQ K;  4A3F K;  2B63 K;  4XLN A;  3HOV C;  3S1R K;  4A3G K;  4A3M K;  4MQ9 A;  2CW0 A;  3PO3 C;  1K83 C;  4BXX C;  3HKZ L;  3RZD K;  4A3C C;  3H0G C;  5FLM K;  4QJV A;  4LJZ A;  1TWH C;  4Y7N C;  3S17 K;  3S2H K;  4C2M C;  3FKI C;  3S15 K;  3GTG K;  4AYB L;  3HOZ K;  3HOX C;  4GZY A;  2JA8 C;  2E2I K;  4BY1 K;  3M3Y K;  4BY7 K;  1TWC K;  5M3F K;  3HOU C;  3M4O C;  3HOW K;  2PMZ L;  1HQM A;  5IYB K;  5C44 C;  5IYC K;  1YNN A;  2JA7 K;  4G7H A;  3S14 C;  2VUM K;  3I4M C;  3GTO K;  2O5J A;  3I4N C;  2YU9 K;  1WCM C;  2NVT K;  4A93 K;  4KN4 A;  4ZH4 A;  3GTM K;  4A3D C;  3GTG C;  1Y1V C;  3HOZ C;  2WAQ D;  4BY1 C;  1TWF K;  1TWG K;  4C3J K;  4C3H K;  5C3E K;  5IP7 K;  2NVX K;  3EQL A;  5M5Y K;  4XLP A;  4OIN A;  5IYD C;  4OIQ A;  3HOW C;  4C3I C;  3S1Q C;  2R92 C;  4X6A C;  4G7Z A;  1TWA K;  3H3V L;  2NVY K;  1R9T K;  2BE5 A;  2JA7 C;  4YFX A;  2VUM C;  2JA5 K;  1XPP A;  3WOD A;  3S1N K;  3CQZ K;  3HKZ D;  3GTJ K;  2E2H K;  2A69 A;  3RZO C;  4A3I K;  3GTL K;  1IW7 A;  3GTP K;  4YFN A;  4YG2 A;  4AYB D;  1ZYR A;  4Q4Z A;  1BDF A;  3GTQ C;  1SFO K;  4A3F C;  4C3J C;  2B63 C;  3S1R C;  4A3G C;  4QIW L;  2NVX C;  2PA8 L;  4BBR K;  2PPB A;  2PMZ D;  2E2J K;  4QJV B;  3HOY K;  1TWA C;  4A3J K;  3K7A K;  4Q5S A;  2NVY C;  2Y0S L;  2JA5 C;  4XSX A;  3RZD C;  5FLM C;  3S1N C;  5TMC A;  4Y52 K;  3S17 C;  3S2H C;  3S15 C;  4BBS K;  1Y1W K;  3PO2 K;  2E2I C;  3M3Y C;  2JA6 K;  3GTL C;  4BY7 C;  1TWC C;  2NVQ K;  5C4X K;  2WB1 L;  5C4J K;  4A3B K;  5IYB C;  4A3E K;  5IYC C;  3S16 K;  3GTO C;  2R93 K;  4KMU A;  3H3V D;  3S1M K;  1I6H K;  2YU9 C;  4LK0 A;  4LK1 A;  3K7A C;  4G7O A;  3GTK K;  2A68 A;  3PO3 K;  1K83 K;  4BXX K;  2NVT C;  5FJ8 K;  4A93 C;  3DXJ A; 
#chains in the Genus database with same CATH topology
 5M5W K;  1SFO A;  4LLG A;  5IP7 C;  2KQ1 A;  3M4O K;  1R9T C;  2V6T A;  4A3L K;  1J6W A;  3S14 K;  5HL7 S;  1I3Q K;  2E2H C;  1WIH A;  4IOC S;  1O27 A;  1Y1V K;  4WJ4 A;  1ZXO A;  5IYD K;  3S1Q K;  2R92 K;  4X6A K;  4WJ3 M;  3H0G A;  4YFK A;  4KAT A;  3L4K A;  3Q3Q A;  3PO2 C;  3FKI K;  2JA6 C;  3AD7 C;  4A3E C;  4WIL A;  5E68 A;  4FM9 A;  3S16 C;  3JST A;  3ORE A;  3S1R K;  5EGE A;  3TFJ A;  4MQ9 A;  1K83 C;  4A3C C;  1TWH C;  2L5N A;  3S17 K;  3S2H K;  3S15 K;  1B4B A;  5IOT A;  1HI9 A;  4GZY A;  5L46 A;  4P9S A;  3N0B A;  3ERE D;  3GIR A;  2PMZ L;  1HQM A;  5DM6 S;  5IYC K;  2FQO A;  3N0C A;  3N3Y A;  3GTO K;  1F7V A;  3I4N C;  2XCO A;  5JVO A;  4ZH4 A;  4A3D C;  3GTG C;  4BKW A;  5IP7 K;  3EQL A;  5M5Y K;  4OIN A;  1YX2 A;  2NVY K;  1R9T K;  2BE5 A;  2JA7 C;  2VUM C;  2JA5 K;  3S1N K;  5JFE A;  2E2H K;  4WFA S;  3RZO C;  2GAG C;  1VLO A;  3GTQ C;  4Q4Z A;  4QIW L;  4WFN S;  2NVX C;  2PPB A;  2PMZ D;  1RU0 A;  3G4C A;  4PAB A;  1TWA C;  2CFA A;  2ZUF A;  2Y0S L;  1WOS A;  1O28 A;  1IL2 A;  3PIP S;  1GE9 A;  1USO A;  4KAW X;  1WOR A;  3PO2 K;  2E2I C;  2JA6 K;  4BY7 C;  1TWC C;  5IYB C;  4A3E K;  3IPJ A;  1WOP A;  1ZBS A;  3S16 K;  4J3N A;  3CQZ A;  2R93 K;  3GTJ A;  4LR2 A;  5JVG S;  2YU9 C;  3K7A C;  2A68 A;  1K83 K;  3GTP A;  4A3C K;  1EK8 A;  1IBA A;  1TWH K;  1TWG C;  5TMF A;  3S1M K;  1JOE A;  1VH2 A;  4OIP A;  4A3K K;  1I50 K;  2A6E A;  4A3B C;  1AB4 A;  2Y3P A;  3S2D K;  1I3Q A;  2KPU A;  4DDQ A;  3LAJ A;  3CF5 S;  2Y0S D;  1I6H C;  1Y1W A;  3I4N K;  1F93 A;  5EGH A;  3T00 A;  4OIO A;  1SMY A;  1SFO C;  2R7Z K;  4A3D K;  3HOV K;  1XZQ A;  3A8K A;  1IE0 A;  2JH3 A;  3FKI A;  5IP9 C;  3RZO K;  2NVQ C;  3BP8 C;  3GTQ K;  1XZP A;  1WCM A;  1XXA A;  1WOO A;  3HKZ L;  3HXA A;  4LOW A;  2RGR A;  3H0G C;  1X31 C;  4KB4 A;  4PAA A;  4Y7N C;  4C2M C;  1WQH A;  3HOZ K;  3HOX C;  2JA8 C;  2E2I K;  4BY7 K;  2ZJR S;  1G51 A;  1TWC K;  3HOU C;  5IYB K;  1YNN A;  1B4A A;  3I4M C;  2O5J A;  5TJ3 A;  2YU9 K;  4G0W A;  1O25 A;  2EBB A;  3V4G A;  4KMD A;  2B63 A;  1TWG K;  4BY1 C;  1UV7 A;  4G0V A;  3TFH A;  3HOW C;  4OIQ A;  4C3I C;  2NVY A;  2JA5 A;  1PJ7 A;  3FOF A;  2GSU A;  3HKZ D;  1JVI A;  3GTL K;  2P8T A;  1ZYR A;  3TTG A;  1SFO K;  4C3J C;  3LYW A;  4A3G C;  2PA8 L;  2RH6 A;  4QJV B;  4KM9 A;  1BS2 A;  3SZZ A;  2ZJP S;  3LPX A;  5CHP A;  4XSX A;  3RZD C;  4IO9 S;  5FLM C;  1J98 A;  3NUH A;  5TMC A;  3GTM A;  1TWF A;  1IS1 A;  3GTK A;  2NVQ K;  4GTA A;  2WB1 L;  2W7V A;  2R93 A;  1PJ6 A;  2XCR B;  2FQT A;  4GTC A;  4LK0 A;  4LK1 A;  4BLB A;  3QX3 A;  2NVT C;  4KM8 A;  3DXJ A;  4BLA A;  1YCL A;  3H0G K;  3MML B;  4Y7N K;  3AQP A;  3AQO A;  4A3M C;  4C2M K;  5M3M K;  3AD9 C;  5M5X K;  5CJ9 A;  1I50 A;  3HOX K;  2JA8 K;  4KAR A;  4KC6 A;  3HOU K;  2PA8 D;  5D4D A;  2GSO A;  1DCP A;  2V6U A;  3CQZ C;  3I4M K;  4G0U A;  3GTJ C;  1O29 A;  1VGX A;  4GTD A;  1I6V A;  1JQW A;  2KXY A;  3GTP C;  2R7Z A;  1KQ4 A;  3TFI A;  4BBR C;  2PHC B;  2WB1 D;  3CAG A;  3HOY C;  4GT9 A;  4C3I K;  4GFQ A;  3FOE A;  4A3L C;  4WF9 S;  3A8I A;  1WSV A;  3PIO S;  1I3Q C;  1Y1W C;  1F9N A;  4NOI A;  2GAH C;  5C4J C;  4QIW D;  4XSZ A;  4MEY A;  4A3G K;  3PO3 C;  5IOQ A;  3RZD K;  5FLM K;  3GEE A;  3BUE A;  4LJZ A;  2P5M A;  1Y1V A;  3FKI C;  3GTG K;  4KB2 A;  5M3F K;  5DM7 S;  2R92 A;  5C44 C;  1EI6 A;  2JA7 K;  4G7H A;  2VUM K;  3DLL S;  3T01 A;  4GTL A;  1WCM C;  2NVT K;  4GTF A;  4A3M K;  1F7U A;  4M1X A;  2NVX K;  4FZB A;  4XLP A;  4KDD A;  1TWA K;  3T02 A;  3L4J A;  1O2F B;  4YFX A;  1XPP A;  3WOD A;  1EH1 A;  2XCQ A;  3CQZ K;  3GTJ K;  1XXB A;  3GTL A;  2ZFZ A;  3GTP K;  4YFN A;  4YG2 A;  4A3F C;  2B63 C;  3GTO A;  1WSR A;  4BBR K;  3FHZ A;  3HOY K;  3G4A A;  3K7A K;  4Q5S A;  2NVY C;  3GEH A;  2JA5 C;  1DCO A;  2KWA A;  3S1N C;  2L3U A;  5HQH A;  1C0A A;  3AD8 C;  4RMF A;  1Y1W K;  3M3Y C;  3BP3 A;  1EFW A;  1BJT A;  1V5V A;  5C4J K;  1R9T A;  4A3B K;  1FEU A;  2E2H A;  3A8J A;  1I6H K;  4G7O A;  1EQR A;  3PO3 K;  4A93 C;  1O24 A;  3GTM C;  1TWF C;  2A6H A;  2O5I A;  4ILD A;  5FJ8 K;  4C3H C;  5C3E C;  3GTK C;  4P5A A;  4KMA A;  1IQ0 A;  5C44 K;  2R93 C;  4OIR A;  5IOR A;  3GSI A;  1VJE A;  2JA6 A;  4A3I C;  1WQF A;  1DD5 A;  4MEX A;  3GEI A;  3GDZ A;  5IP9 K;  1BGW A;  1WCM K;  4JK1 A;  2CFA B;  4C45 A;  3S1M C;  4A3K C;  2E2J C;  1I50 C;  1WQG A;  4A3J C;  4KN7 A;  1VRQ C;  1K83 A;  4WCE S;  3S2D C;  1TWH A;  4Y52 C;  1ISE A;  4BBS C;  1YNJ A;  1INN A;  4XCH A;  4KMH A;  2WAQ L;  5C4X C;  1USM A;  2R7Z C;  2D6F C;  4A3F K;  2B63 K;  4XLN A;  3HOV C;  2CW0 A;  2ZJQ S;  2GSN A;  4KAS A;  4BXX C;  5JVH S;  4AH6 A;  4QJV A;  1J6X A;  4WFB S;  3GTG A;  4P5B A;  4AYB L;  4BY1 K;  3S0X A;  3M3Y K;  3M4O C;  4O2D A;  3VA7 A;  3HOW K;  2ZUE A;  3SZY A;  2VUM A;  2JA7 A;  1L0W A;  5HL8 A;  3S14 C;  5IOS A;  3AH5 A;  4A93 K;  4KN4 A;  3GTQ A;  1DCH A;  3GTM K;  1TWF K;  1Y1V C;  3HOZ C;  2WAQ D;  1PJ5 A;  4C3J K;  4C3H K;  2NVX A;  1XZQ B;  5C3E K;  1TWA A;  3LAP A;  3GTK K;  5IYD C;  3S1Q C;  1O2A A;  2R92 C;  4X6A C;  4G7Z A;  3H3V L;  4IOA S;  1J6V A;  4GTB A;  2A69 A;  2E2I A;  4A3I K;  1TWC A;  1ZQ1 C;  2V6S A;  4U67 S;  1XZP B;  1IW7 A;  3OEP A;  4AYB D;  1BDF A;  3OPF A;  3ADA C;  3S1R C;  2E2J K;  2YU9 A;  4A3J K;  4GTE A;  1O2B A;  1XXC A;  4LQY A;  4Y52 K;  3S17 C;  3S2H C;  3S15 C;  1TWG A;  4BBS K;  1ZVU A;  3GTL C;  5C4X K;  1O26 A;  5IYC C;  3GTO C;  4KMU A;  3H3V D;  4BXX K; 
#chains in the Genus database with same CATH homology
 3H0G K;  5M5W K;  1TWH K;  3GTM C;  4Y7N K;  1TWF C;  2A6H A;  4LLG A;  1TWG C;  5TMF A;  4C3H C;  5IP7 C;  4A3M C;  2O5I A;  5C3E C;  4OIP A;  4C2M K;  5M3M K;  5M5X K;  3HOX K;  2JA8 K;  4A3K K;  3GTK C;  1I50 K;  2A6E A;  4A3B C;  3HOU K;  2PA8 D;  5D4D A;  3M4O K;  1R9T C;  5C44 K;  2R93 C;  4A3L K;  3S2D K;  3S14 K;  3CQZ C;  4OIR A;  1I6H C;  2Y0S D;  1I3Q K;  3GTJ C;  3I4M K;  2E2H C;  3I4N K;  4A3I C;  5IP9 K;  4MEX A;  1I6V A;  1WCM K;  3GTP C;  4JK1 A;  4OIO A;  1SMY A;  1SFO C;  2R7Z K;  3S1M C;  4A3D K;  4BBR C;  1Y1V K;  3HOV K;  2WB1 D;  4A3K C;  1I50 C;  2E2J C;  3HOY C;  4A3J C;  4KN7 A;  5IYD K;  3S1Q K;  4C3I K;  2R92 K;  4X6A K;  4A3L C;  3S2D C;  4YFK A;  1I3Q C;  4Y52 C;  4A3C K;  4BBS C;  1YNJ A;  1Y1W C;  3PO2 C;  5IP9 C;  3FKI K;  2JA6 C;  3RZO K;  4NOI A;  2NVQ C;  2WAQ L;  5C4X C;  5C4J C;  4QIW D;  4A3E C;  2R7Z C;  4XSZ A;  4MEY A;  3S16 C;  3GTQ K;  4A3F K;  2B63 K;  4XLN A;  3HOV C;  3S1R K;  4A3G K;  4A3M K;  4MQ9 A;  2CW0 A;  3PO3 C;  1K83 C;  4BXX C;  3HKZ L;  3RZD K;  4A3C C;  3H0G C;  5FLM K;  4QJV A;  4LJZ A;  1TWH C;  4Y7N C;  3S17 K;  3S2H K;  4C2M C;  3FKI C;  3S15 K;  3GTG K;  4AYB L;  3HOZ K;  3HOX C;  4GZY A;  2JA8 C;  2E2I K;  4BY1 K;  3M3Y K;  4BY7 K;  1TWC K;  5M3F K;  3HOU C;  3M4O C;  3HOW K;  2PMZ L;  1HQM A;  5IYB K;  5C44 C;  5IYC K;  1YNN A;  2JA7 K;  4G7H A;  3S14 C;  2VUM K;  3I4M C;  3GTO K;  2O5J A;  3I4N C;  2YU9 K;  1WCM C;  2NVT K;  4A93 K;  4KN4 A;  4ZH4 A;  3GTM K;  4A3D C;  3GTG C;  1Y1V C;  3HOZ C;  2WAQ D;  4BY1 C;  1TWF K;  1TWG K;  4C3J K;  4C3H K;  5C3E K;  5IP7 K;  2NVX K;  3EQL A;  5M5Y K;  4XLP A;  4OIN A;  5IYD C;  4OIQ A;  3HOW C;  4C3I C;  3S1Q C;  2R92 C;  4X6A C;  4G7Z A;  1TWA K;  3H3V L;  2NVY K;  1R9T K;  2BE5 A;  2JA7 C;  4YFX A;  2VUM C;  2JA5 K;  1XPP A;  3WOD A;  3S1N K;  3CQZ K;  3HKZ D;  3GTJ K;  2E2H K;  2A69 A;  3RZO C;  4A3I K;  3GTL K;  1IW7 A;  3GTP K;  4YFN A;  4YG2 A;  4AYB D;  1ZYR A;  4Q4Z A;  1BDF A;  3GTQ C;  1SFO K;  4A3F C;  4C3J C;  2B63 C;  3S1R C;  4A3G C;  4QIW L;  2NVX C;  2PA8 L;  4BBR K;  2PPB A;  2PMZ D;  2E2J K;  4QJV B;  3HOY K;  1TWA C;  4A3J K;  3K7A K;  4Q5S A;  2NVY C;  2Y0S L;  2JA5 C;  4XSX A;  3RZD C;  5FLM C;  3S1N C;  5TMC A;  4Y52 K;  3S17 C;  3S2H C;  3S15 C;  4BBS K;  1Y1W K;  3PO2 K;  2E2I C;  3M3Y C;  2JA6 K;  3GTL C;  4BY7 C;  1TWC C;  2NVQ K;  5C4X K;  2WB1 L;  5C4J K;  4A3B K;  5IYB C;  4A3E K;  5IYC C;  3S16 K;  3GTO C;  2R93 K;  4KMU A;  3H3V D;  3S1M K;  1I6H K;  2YU9 C;  4LK0 A;  4LK1 A;  3K7A C;  4G7O A;  3GTK K;  2A68 A;  3PO3 K;  1K83 K;  4BXX K;  2NVT C;  5FJ8 K;  4A93 C;  3DXJ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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