5IP9C

Structure of rna polymerase ii-tfiif complex
Total Genus 61
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
61
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transcription
molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Transcription initiation complex structures elucidate DNA opening.
pubmed doi rcsb
source organism Saccharomyces cerevisiae
total genus 61
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2016-03-09

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 5ip9C02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 5ip9C01
4BBSK 1TWAC 4A3MC 5IYBC 4BY7C 4A3GC 1Y1WC 3HOUK 3HOYK 3PO3K 2NVXC 5IYCK 4A3BK 2E2IC 1TWCK 1TWFK 3S1QC 2PPBA 3DXJA 3I4MC 4AYBD 3S17K 3S1NK 1TWGK 3FKIK 3RZDK 3CQZC 2E2HC 2R93C 4BXXK 2R7ZK 1TWHK 3S16C 3HOXC 3GTPC 1WCMK 4A3JK 3GTOK 5C4JK 1IW7A 4XLPA 4A3DK 3HOWK 2JA6K 5TMFA 4A93C 4XSZA 4OINA 5M5WK 4YFXA 5M5YK 3S1RK 3S1MK 3H0GC 3S2HK 4ZH4A 5D4DA 4KN7A 4A3EC 2PA8D 2R92C 3M4OK 3EQLA 5M3MK 4LK1A 5M3FK 2PMZL 2JA7K 2JA5C 4G7OA 3S14K 5C3EC 4C3IK 1TWAK 4A3MK 4G7HA 4QIWL 5IYBK 4A3GK 1Y1WK 5C44K 4Q4ZA 2E2IK 3HOVC 5C4XC 2NVYC 1SFOK 3S1QK 4C3HC 3K7AC 3GTKC 4X6AC 4BY1K 3GTMC 1Y1VK 2WAQL 3CQZK 4Y52C 2E2HK 2YU9K 4A3CC 2B63K 2R93K 4A3KC 3S16K 3HOXK 4LLGA 4Q5SA 3RZOC 2NVTK 3GTLC 4XSXA 1I6VA 1I3QC 1K83C 3WODA 3GTQC 3S15C 4OIRA 3GTGK 2A69A 3I4NC 1I50K 3HKZL 4A93K 5IP9C 2JA8C 4BBRC 3HOZC 3H0GK 3GTJK 1SMYA 5IP7C 4A3FC 2E2JC 1I6HK 5IYDC 4A3EK 4A3IC 2NVQK 1ZYRA 2BE5A 2O5JA 4A3BC 4C3JK 3M3YK 1R9TC 2O5IA 2VUMC 2Y0SL 2JA5K 3S2DC 3S1NC 5C3EK 4NOIA 2WB1L 4BY7K 1YNNA 2NVXK 4QJVB 4Y7NC 3HOVK 1TWHC 2NVYK 4C2MC 5FLMC 3K7AK 4C3HK 3GTKK 3I4MK 4X6AK 4YG2A 5C4JC 4A3LC 4A3DC 3HOWC 3S1RC 3H3VL 4YFNA 4Y52K 4LJZA 4XLNA 1HQMA 2PMZD 2CW0A 2Y0SD 3RZOK 3GTPK 3GTLK 4MEYA 4QIWD 2WB1D 5FJ8K 3M4OC 3S15K 4OIOA 3PO2C 2JA8K 4BBRK 2JA7C 4MEXA 3HOZK 2YU9C 3S14C 4BBSC 2E2JK 5IYDK 2A6HA 3HOUC 3HOYC 3PO3C 5M5XK 5IYCC 4A3IK 5C44C 2WAQD 2R92K 4OIQA 1TWCC 3H3VD 1TWFC 1BDFA 1SFOC 1R9TK 4JK1A 2A6EA 2VUMK 3S2DK 3S17C 5TMCA 1TWGC 4OIPA 4BY1C 2PA8L 3FKIC 1YNJA 3RZDC 4KN4A 1Y1VC 4BXXC 3HKZD 2B63C 2R7ZC 5C4XK 4Y7NK 4KMUA 2NVTC 4GZYA 4C2MK 4QJVA 1WCMC 4YFKA 4A3JC 3GTOC 4G7ZA 5FLMK 2A68A 3GTMK 4A3LK 3GTGC 2JA6C 1I50C 4A3CK 3S1MC 4MQ9A 3S2HC 4A3KK 3GTJC 1I6HC 4AYBL 1I3QK 1K83K 1XPPA 2NVQC 3GTQK 3I4NK 4C3JC 5IP9K 3PO2K 3M3YC 4LK0A 4A3FK 5IP7K 4C3IC
chains in the Genus database with same CATH superfamily
4BBSK 1TWAC 3HOUK 2NVXC 1IE0A 3ADAC 3DXJA 3S1NK 3S17K 1TWGK 3LAJA 1DCPA 4WF9S 2E2HC 3SZZA 2R7ZK 1TWHK 1SFOA 3GTPC 1WCMK 3TFIA 5C4JK 1O27A 4A3DK 3FOFA 2JA6K 5TMFA 2B63A 3H0GC 5IOTA 2PA8D 3GTGA 5JFEA 3EQLA 2CFAB 4FZBA 2JA7K 4FM9A 2P8TA 2E2IK 3HOVC 4ILDA 2KWAA 2JA5A 3K7AC 4LR2A 5JVGS 1J98A 3GTMC 1EH1A 4A3CC 4A3KC 3HOXK 4Q5SA 3RZOC 4KARA 3GTLC 1I3QC 3DLLS 3GTQC 4OIRA 1I50K 1VLOA 3HKZL 3LAPA 3GTJK 3BP8C 3FOEA 5IYDC 4WILA 3AH5A 4WJ4A 4A3BC 1R9TC 1XXAA 5C3EK 1JVIA 4KB2A 2R92A 2NVXK 4KB4A 1VJEA 3BP3A 5FLMC 4X6AK 4IOCS 1PJ5A 3HOWC 3CAGA 4YFNA 2V6SA 1HQMA 2PMZD 2CW0A 2NVYA 3GTPK 4RMFA 5FJ8K 3M4OC 4IO9S 3S15K 1KQ4A 2EBBA 4OIOA 2YU9C 3S14C 4BBSC 3HOUC 3AQOA 1F9NA 3OPFA 3H3VD 1BDFA 2CFAA 2A6EA 3S17C 2PA8L 1TWGC 4BY1C 4GTEA 2R7ZC 5HQHA 1O25A 4C2MK 1WCMC 3BUEA 3GTMK 2JA6C 3L4JA 4A3CK 4GFQA 4A3KK 2JH3A 1I3QK 3GTQK 4BLBA 1EI6A 2ZJPS 1O29A 4C3JC 4LK0A 4KMAA 1J6VA 3VA7A 4O2DA 3HOYK 1BS2A 5IYCK 4A3BK 2E2IC 5CHPA 5IORA 3I4MC 4AYBD 1BGWA 3AD7C 5IOSA 1TWCA 2KPUA 1TWFA 3HOXC 1IQ0A 4WFBS 1IS1A 1WSVA 1WORA 5DM7S 3HOWK 1Y1VA 4XSZA 4OINA 5M5YK 4YFXA 3TFJA 4WCES 3LPXA 4ZH4A 5JVHS 2ZJRS 2D6FC 3GTOA 1PJ7A 3M4OK 3GEIA 4LOWA 5M3FK 2PMZL 4G7OA 3S14K 5C3EC 4GTCA 4C3IK 4A3MK 3GIRA 4A3GK 1Y1WK 4Q4ZA 4KMDA 3TTGA 4X6AC 4BY1K 2R93K 1WOPA 3AD8C 3S16K 4P5AA 4LLGA 1K83C 3S15C 3CQZA 4GTFA 2GSUA 5IP7C 5HL7S 4A3EK 3OEPA 2BE5A 2ZFZA 4C3JK 2O5IA 2KXYA 1DD5A 2WB1L 3AD9C 1YNNA 3GEHA 2L5NA 2NVYK 4C2MC 3I4MK 3GTKK 2ZUEA 4Y52K 4XLNA 1ZVUA 2Y0SD 2PHCB 1JOEA 1EK8A 4MEYA 1BJTA 4BLAA 1F7VA 1WIHA 3HOZK 4MEXA 2E2JK 4KATA 2ZUFA 4A3IK 3HOYC 1VRQC 5IYCC 5C44C 3QX3A 1SFOC 3N3YA 5TMCA 2B63C 4Y7NK 4KMUA 2VUMA 4G7ZA 4G0WA 3GTGC 3T00A 4LQYA 4MQ9A 1TWHA 1I6HC 1USOA 1DCOA 1K83K 2JA6A 1YX2A 3T01A 3PO2K 3G4AA 4AH6A 1USMA 5IP7K 2V6TA 4C3IC 4A3MC 4A3GC 1Y1WC 3A8JA 1TWCK 1TWFK 1WQFA 2JA7A 1PJ6A 4GTLA 2R93C 1WQHA 3S16C 3GTOK 1X31C 1IW7A 3FKIA 3S1MK 3S2HK 5D4DA 1B4BA 4A3EC 1O24A 2R92C 5M3MK 1I50A 2FQTA 3GTJA 5IYBK 3LYWA 5C44K 4KAWX 2NVYC 1SFOK 3S1QK 3GTKC 3PIPS 1TWAA 5EGEA 3CQZK 2NVXA 4Y52C 2B63K 4KDDA 4XSXA 3N0CA 1I6VA 3NUHA 3GTGK 2GAHC 3I4NC 4J3NA 4A93K 2L3UA 2E2HA 3HOZC 1G51A 4A3FC 2E2JC 1I6HK 3GTPA 4A3IC 1ZYRA 1AB4A 2O5JA 5TJ3A 3S0XA 1XXBA 1XZQB 3H0GA 2JA5K 3SZYA 1O2AA 4XCHA 4GT9A 4Y7NC 2XCQA 1F93A 1INNA 4P9SA 4C3HK 3T02A 4YG2A 3S1RC 3H3VL 2RGRA 4LJZA 1F7UA 4GTDA 4PABA 4BKWA 4IOAS 5IOQA 4QIWD 3GTMA 3PO2C 2JA8K 4BBRK 5EGHA 1EQRA 3GTLA 4U67S 1I3QA 2Y3PA 5M5XK 2R92K 3GTQA 2RH6A 2WAQD 1TWCC 1TWFC 2VUMK 3S2DK 1B4AA 1O28A 1YNJA 4KN4A 1Y1VC 3PIOS 3TFHA 3N0BA 1R9TA 2NVTC 5L46A 4QJVA 4YFKA 3GTOC 3GDZA 4P5BA 3Q3QA 4PAAA 4A3LK 2ZJQS 1J6XA 1FEUA 3S1MC 3S2HC 4DDQA 1O2BA 4AYBL 1XPPA 4KC6A 2NVQC 3I4NK 3M3YC 4A3FK 1IBAA 1JQWA 5IYBC 4BY7C 3PO3K 4WFAS 3S1QC 2PPBA 1XZQA 2YU9A 1IL2A 3FKIK 3RZDK 3CQZC 1Y1WA 4BXXK 2XCRB 1HI9A 2P5MA 1XZPB 1WOOA 4A3JK 3IPJA 1TWGA 4XLPA 4A93C 5M5WK 3S1RK 2R7ZA 2R93A 1WCMA 4KN7A 3JSTA 3G4CA 3MMLB 4LK1A 2JA5C 3ERED 4M1XA 1VH2A 1TWAK 4G7HA 4QIWL 3FHZA 1EFWA 1WOSA 1VGXA 1C0AA 5C4XC 4C3HC 4KM8A 1L0WA 1Y1VK 2WAQL 2KQ1A 5CJ9A 2E2HK 4KASA 2E2IA 2NVTK 1YCLA 4C45A 3GTKA 4KMHA 3WODA 4G0VA 2A69A 3GSIA 5IP9C 2JA8C 4BBRC 3H0GK 1SMYA 3CF5S 2FQOA 1XXCA 2GAGC 2V6UA 2GSOA 4GTAA 2NVQK 3OREA 5JVOA 3M3YK 2VUMC 2Y0SL 1WQGA 3S2DC 3S1NC 4NOIA 4BY7K 3A8IA 4QJVB 1ZQ1C 1RU0A 1TWHC 3HOVK 4KM9A 5E68A 3K7AK 5C4JC 1O26A 4A3LC 4A3DC 1DCHA 1V5VA 3HXAA 4G0UA 4WJ3M 3RZOK 3GTLK 1XZPA 2WB1D 2JA7C 3A8KA 1ZXOA 1WSRA 5IYDK 2A6HA 1K83A 3PO3C 1ZBSA 4OIQA 3L4KA 1ISEA 5HL8A 1R9TK 4JK1A 1J6WA 4OIPA 4WFNS 3FKIC 3RZDC 3V4GA 4BXXC 3HKZD 5DM6S 5C4XK 3AQPA 4GTBA 4GZYA 2W7VA 4A3JC 5FLMK 2A68A 1I50C 3GTJC 1UV7A 2GSNA 1GE9A 1O2FB 5IP9K 2XCOA 3GEEA 2YU9K
chains in the Genus database with same CATH topology
4BBSK 1TWAC 4A3MC 5IYBC 4BY7C 4A3GC 1Y1WC 3HOUK 3HOYK 3PO3K 2NVXC 5IYCK 4A3BK 2E2IC 1TWCK 1TWFK 3S1QC 2PPBA 3DXJA 3I4MC 4AYBD 3S17K 3S1NK 1TWGK 3FKIK 3RZDK 3CQZC 2E2HC 2R93C 4BXXK 2R7ZK 1TWHK 3S16C 3HOXC 3GTPC 1WCMK 4A3JK 3GTOK 5C4JK 1IW7A 4XLPA 4A3DK 3HOWK 2JA6K 5TMFA 4A93C 4XSZA 4OINA 5M5WK 4YFXA 5M5YK 3S1RK 3S1MK 3H0GC 3S2HK 4ZH4A 5D4DA 4KN7A 4A3EC 2PA8D 2R92C 3M4OK 3EQLA 5M3MK 4LK1A 5M3FK 2PMZL 2JA7K 2JA5C 4G7OA 3S14K 5C3EC 4C3IK 1TWAK 4A3MK 4G7HA 4QIWL 5IYBK 4A3GK 1Y1WK 5C44K 4Q4ZA 2E2IK 3HOVC 5C4XC 2NVYC 1SFOK 3S1QK 4C3HC 3K7AC 3GTKC 4X6AC 4BY1K 3GTMC 1Y1VK 2WAQL 3CQZK 4Y52C 2E2HK 2YU9K 4A3CC 2B63K 2R93K 4A3KC 3S16K 3HOXK 4LLGA 4Q5SA 3RZOC 2NVTK 3GTLC 4XSXA 1I6VA 1I3QC 1K83C 3WODA 3GTQC 3S15C 4OIRA 3GTGK 2A69A 3I4NC 1I50K 3HKZL 4A93K 5IP9C 2JA8C 4BBRC 3HOZC 3H0GK 3GTJK 1SMYA 5IP7C 4A3FC 2E2JC 1I6HK 5IYDC 4A3EK 4A3IC 2NVQK 1ZYRA 2BE5A 2O5JA 4A3BC 4C3JK 3M3YK 1R9TC 2O5IA 2VUMC 2Y0SL 2JA5K 3S2DC 3S1NC 5C3EK 4NOIA 2WB1L 4BY7K 1YNNA 2NVXK 4QJVB 4Y7NC 3HOVK 1TWHC 2NVYK 4C2MC 5FLMC 3K7AK 4C3HK 3GTKK 3I4MK 4X6AK 4YG2A 5C4JC 4A3LC 4A3DC 3HOWC 3S1RC 3H3VL 4YFNA 4Y52K 4LJZA 4XLNA 1HQMA 2PMZD 2CW0A 2Y0SD 3RZOK 3GTPK 3GTLK 4MEYA 4QIWD 2WB1D 5FJ8K 3M4OC 3S15K 4OIOA 3PO2C 2JA8K 4BBRK 2JA7C 4MEXA 3HOZK 2YU9C 3S14C 4BBSC 2E2JK 5IYDK 2A6HA 3HOUC 3HOYC 3PO3C 5M5XK 5IYCC 4A3IK 5C44C 2WAQD 2R92K 4OIQA 1TWCC 3H3VD 1TWFC 1BDFA 1SFOC 1R9TK 4JK1A 2A6EA 2VUMK 3S2DK 3S17C 5TMCA 1TWGC 4OIPA 4BY1C 2PA8L 3FKIC 1YNJA 3RZDC 4KN4A 1Y1VC 4BXXC 3HKZD 2B63C 2R7ZC 5C4XK 4Y7NK 4KMUA 2NVTC 4GZYA 4C2MK 4QJVA 1WCMC 4YFKA 4A3JC 3GTOC 4G7ZA 5FLMK 2A68A 3GTMK 4A3LK 3GTGC 2JA6C 1I50C 4A3CK 3S1MC 4MQ9A 3S2HC 4A3KK 3GTJC 1I6HC 4AYBL 1I3QK 1K83K 1XPPA 2NVQC 3GTQK 3I4NK 4C3JC 5IP9K 3PO2K 3M3YC 4LK0A 4A3FK 5IP7K 4C3IC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4BBS K;  1TWA C;  4A3M C;  5IYB C;  4BY7 C;  4A3G C;  1Y1W C;  3HOU K;  3HOY K;  3PO3 K;  2NVX C;  5IYC K;  4A3B K;  2E2I C;  1TWC K;  1TWF K;  3S1Q C;  2PPB A;  3DXJ A;  3I4M C;  4AYB D;  3S17 K;  3S1N K;  1TWG K;  3FKI K;  3RZD K;  3CQZ C;  2E2H C;  2R93 C;  4BXX K;  2R7Z K;  1TWH K;  3S16 C;  3HOX C;  3GTP C;  1WCM K;  4A3J K;  3GTO K;  5C4J K;  1IW7 A;  4XLP A;  4A3D K;  3HOW K;  2JA6 K;  5TMF A;  4A93 C;  4XSZ A;  4OIN A;  5M5W K;  4YFX A;  5M5Y K;  3S1R K;  3S1M K;  3H0G C;  3S2H K;  4ZH4 A;  5D4D A;  4KN7 A;  4A3E C;  2PA8 D;  2R92 C;  3M4O K;  3EQL A;  5M3M K;  4LK1 A;  5M3F K;  2PMZ L;  2JA7 K;  2JA5 C;  4G7O A;  3S14 K;  5C3E C;  4C3I K;  1TWA K;  4A3M K;  4G7H A;  4QIW L;  5IYB K;  4A3G K;  1Y1W K;  5C44 K;  4Q4Z A;  2E2I K;  3HOV C;  5C4X C;  2NVY C;  1SFO K;  3S1Q K;  4C3H C;  3K7A C;  3GTK C;  4X6A C;  4BY1 K;  3GTM C;  1Y1V K;  2WAQ L;  3CQZ K;  4Y52 C;  2E2H K;  2YU9 K;  4A3C C;  2B63 K;  2R93 K;  4A3K C;  3S16 K;  3HOX K;  4LLG A;  4Q5S A;  3RZO C;  2NVT K;  3GTL C;  4XSX A;  1I6V A;  1I3Q C;  1K83 C;  3WOD A;  3GTQ C;  3S15 C;  4OIR A;  3GTG K;  2A69 A;  3I4N C;  1I50 K;  3HKZ L;  4A93 K;  5IP9 C;  2JA8 C;  4BBR C;  3HOZ C;  3H0G K;  3GTJ K;  1SMY A;  5IP7 C;  4A3F C;  2E2J C;  1I6H K;  5IYD C;  4A3E K;  4A3I C;  2NVQ K;  1ZYR A;  2BE5 A;  2O5J A;  4A3B C;  4C3J K;  3M3Y K;  1R9T C;  2O5I A;  2VUM C;  2Y0S L;  2JA5 K;  3S2D C;  3S1N C;  5C3E K;  4NOI A;  2WB1 L;  4BY7 K;  1YNN A;  2NVX K;  4QJV B;  4Y7N C;  3HOV K;  1TWH C;  2NVY K;  4C2M C;  5FLM C;  3K7A K;  4C3H K;  3GTK K;  3I4M K;  4X6A K;  4YG2 A;  5C4J C;  4A3L C;  4A3D C;  3HOW C;  3S1R C;  3H3V L;  4YFN A;  4Y52 K;  4LJZ A;  4XLN A;  1HQM A;  2PMZ D;  2CW0 A;  2Y0S D;  3RZO K;  3GTP K;  3GTL K;  4MEY A;  4QIW D;  2WB1 D;  5FJ8 K;  3M4O C;  3S15 K;  4OIO A;  3PO2 C;  2JA8 K;  4BBR K;  2JA7 C;  4MEX A;  3HOZ K;  2YU9 C;  3S14 C;  4BBS C;  2E2J K;  5IYD K;  2A6H A;  3HOU C;  3HOY C;  3PO3 C;  5M5X K;  5IYC C;  4A3I K;  5C44 C;  2WAQ D;  2R92 K;  4OIQ A;  1TWC C;  3H3V D;  1TWF C;  1BDF A;  1SFO C;  1R9T K;  4JK1 A;  2A6E A;  2VUM K;  3S2D K;  3S17 C;  5TMC A;  1TWG C;  4OIP A;  4BY1 C;  2PA8 L;  3FKI C;  1YNJ A;  3RZD C;  4KN4 A;  1Y1V C;  4BXX C;  3HKZ D;  2B63 C;  2R7Z C;  5C4X K;  4Y7N K;  4KMU A;  2NVT C;  4GZY A;  4C2M K;  4QJV A;  1WCM C;  4YFK A;  4A3J C;  3GTO C;  4G7Z A;  5FLM K;  2A68 A;  3GTM K;  4A3L K;  3GTG C;  2JA6 C;  1I50 C;  4A3C K;  3S1M C;  4MQ9 A;  3S2H C;  4A3K K;  3GTJ C;  1I6H C;  4AYB L;  1I3Q K;  1K83 K;  1XPP A;  2NVQ C;  3GTQ K;  3I4N K;  4C3J C;  5IP9 K;  3PO2 K;  3M3Y C;  4LK0 A;  4A3F K;  5IP7 K;  4C3I C; 
#chains in the Genus database with same CATH topology
 4BBS K;  1TWA C;  3HOU K;  2NVX C;  1IE0 A;  3ADA C;  3DXJ A;  3S1N K;  3S17 K;  1TWG K;  3LAJ A;  1DCP A;  4WF9 S;  2E2H C;  3SZZ A;  2R7Z K;  1TWH K;  1SFO A;  3GTP C;  1WCM K;  3TFI A;  5C4J K;  1O27 A;  4A3D K;  3FOF A;  2JA6 K;  5TMF A;  2B63 A;  3H0G C;  5IOT A;  2PA8 D;  3GTG A;  5JFE A;  3EQL A;  2CFA B;  4FZB A;  2JA7 K;  4FM9 A;  2P8T A;  2E2I K;  3HOV C;  4ILD A;  2KWA A;  2JA5 A;  3K7A C;  4LR2 A;  5JVG S;  1J98 A;  3GTM C;  1EH1 A;  4A3C C;  4A3K C;  3HOX K;  4Q5S A;  3RZO C;  4KAR A;  3GTL C;  1I3Q C;  3DLL S;  3GTQ C;  4OIR A;  1I50 K;  1VLO A;  3HKZ L;  3LAP A;  3GTJ K;  3BP8 C;  3FOE A;  5IYD C;  4WIL A;  3AH5 A;  4WJ4 A;  4A3B C;  1R9T C;  1XXA A;  5C3E K;  1JVI A;  4KB2 A;  2R92 A;  2NVX K;  4KB4 A;  1VJE A;  3BP3 A;  5FLM C;  4X6A K;  4IOC S;  1PJ5 A;  3HOW C;  3CAG A;  4YFN A;  2V6S A;  1HQM A;  2PMZ D;  2CW0 A;  2NVY A;  3GTP K;  4RMF A;  5FJ8 K;  3M4O C;  4IO9 S;  3S15 K;  1KQ4 A;  2EBB A;  4OIO A;  2YU9 C;  3S14 C;  4BBS C;  3HOU C;  3AQO A;  1F9N A;  3OPF A;  3H3V D;  1BDF A;  2CFA A;  2A6E A;  3S17 C;  2PA8 L;  1TWG C;  4BY1 C;  4GTE A;  2R7Z C;  5HQH A;  1O25 A;  4C2M K;  1WCM C;  3BUE A;  3GTM K;  2JA6 C;  3L4J A;  4A3C K;  4GFQ A;  4A3K K;  2JH3 A;  1I3Q K;  3GTQ K;  4BLB A;  1EI6 A;  2ZJP S;  1O29 A;  4C3J C;  4LK0 A;  4KMA A;  1J6V A;  3VA7 A;  4O2D A;  3HOY K;  1BS2 A;  5IYC K;  4A3B K;  2E2I C;  5CHP A;  5IOR A;  3I4M C;  4AYB D;  1BGW A;  3AD7 C;  5IOS A;  1TWC A;  2KPU A;  1TWF A;  3HOX C;  1IQ0 A;  4WFB S;  1IS1 A;  1WSV A;  1WOR A;  5DM7 S;  3HOW K;  1Y1V A;  4XSZ A;  4OIN A;  5M5Y K;  4YFX A;  3TFJ A;  4WCE S;  3LPX A;  4ZH4 A;  5JVH S;  2ZJR S;  2D6F C;  3GTO A;  1PJ7 A;  3M4O K;  3GEI A;  4LOW A;  5M3F K;  2PMZ L;  4G7O A;  3S14 K;  5C3E C;  4GTC A;  4C3I K;  4A3M K;  3GIR A;  4A3G K;  1Y1W K;  4Q4Z A;  4KMD A;  3TTG A;  4X6A C;  4BY1 K;  2R93 K;  1WOP A;  3AD8 C;  3S16 K;  4P5A A;  4LLG A;  1K83 C;  3S15 C;  3CQZ A;  4GTF A;  2GSU A;  5IP7 C;  5HL7 S;  4A3E K;  3OEP A;  2BE5 A;  2ZFZ A;  4C3J K;  2O5I A;  2KXY A;  1DD5 A;  2WB1 L;  3AD9 C;  1YNN A;  3GEH A;  2L5N A;  2NVY K;  4C2M C;  3I4M K;  3GTK K;  2ZUE A;  4Y52 K;  4XLN A;  1ZVU A;  2Y0S D;  2PHC B;  1JOE A;  1EK8 A;  4MEY A;  1BJT A;  4BLA A;  1F7V A;  1WIH A;  3HOZ K;  4MEX A;  2E2J K;  4KAT A;  2ZUF A;  4A3I K;  3HOY C;  1VRQ C;  5IYC C;  5C44 C;  3QX3 A;  1SFO C;  3N3Y A;  5TMC A;  2B63 C;  4Y7N K;  4KMU A;  2VUM A;  4G7Z A;  4G0W A;  3GTG C;  3T00 A;  4LQY A;  4MQ9 A;  1TWH A;  1I6H C;  1USO A;  1DCO A;  1K83 K;  2JA6 A;  1YX2 A;  3T01 A;  3PO2 K;  3G4A A;  4AH6 A;  1USM A;  5IP7 K;  2V6T A;  4C3I C;  4A3M C;  4A3G C;  1Y1W C;  3A8J A;  1TWC K;  1TWF K;  1WQF A;  2JA7 A;  1PJ6 A;  4GTL A;  2R93 C;  1WQH A;  3S16 C;  3GTO K;  1X31 C;  1IW7 A;  3FKI A;  3S1M K;  3S2H K;  5D4D A;  1B4B A;  4A3E C;  1O24 A;  2R92 C;  5M3M K;  1I50 A;  2FQT A;  3GTJ A;  5IYB K;  3LYW A;  5C44 K;  4KAW X;  2NVY C;  1SFO K;  3S1Q K;  3GTK C;  3PIP S;  1TWA A;  5EGE A;  3CQZ K;  2NVX A;  4Y52 C;  2B63 K;  4KDD A;  4XSX A;  3N0C A;  1I6V A;  3NUH A;  3GTG K;  2GAH C;  3I4N C;  4J3N A;  4A93 K;  2L3U A;  2E2H A;  3HOZ C;  1G51 A;  4A3F C;  2E2J C;  1I6H K;  3GTP A;  4A3I C;  1ZYR A;  1AB4 A;  2O5J A;  5TJ3 A;  3S0X A;  1XXB A;  1XZQ B;  3H0G A;  2JA5 K;  3SZY A;  1O2A A;  4XCH A;  4GT9 A;  4Y7N C;  2XCQ A;  1F93 A;  1INN A;  4P9S A;  4C3H K;  3T02 A;  4YG2 A;  3S1R C;  3H3V L;  2RGR A;  4LJZ A;  1F7U A;  4GTD A;  4PAB A;  4BKW A;  4IOA S;  5IOQ A;  4QIW D;  3GTM A;  3PO2 C;  2JA8 K;  4BBR K;  5EGH A;  1EQR A;  3GTL A;  4U67 S;  1I3Q A;  2Y3P A;  5M5X K;  2R92 K;  3GTQ A;  2RH6 A;  2WAQ D;  1TWC C;  1TWF C;  2VUM K;  3S2D K;  1B4A A;  1O28 A;  1YNJ A;  4KN4 A;  1Y1V C;  3PIO S;  3TFH A;  3N0B A;  1R9T A;  2NVT C;  5L46 A;  4QJV A;  4YFK A;  3GTO C;  3GDZ A;  4P5B A;  3Q3Q A;  4PAA A;  4A3L K;  2ZJQ S;  1J6X A;  1FEU A;  3S1M C;  3S2H C;  4DDQ A;  1O2B A;  4AYB L;  1XPP A;  4KC6 A;  2NVQ C;  3I4N K;  3M3Y C;  4A3F K;  1IBA A;  1JQW A;  5IYB C;  4BY7 C;  3PO3 K;  4WFA S;  3S1Q C;  2PPB A;  1XZQ A;  2YU9 A;  1IL2 A;  3FKI K;  3RZD K;  3CQZ C;  1Y1W A;  4BXX K;  2XCR B;  1HI9 A;  2P5M A;  1XZP B;  1WOO A;  4A3J K;  3IPJ A;  1TWG A;  4XLP A;  4A93 C;  5M5W K;  3S1R K;  2R7Z A;  2R93 A;  1WCM A;  4KN7 A;  3JST A;  3G4C A;  3MML B;  4LK1 A;  2JA5 C;  3ERE D;  4M1X A;  1VH2 A;  1TWA K;  4G7H A;  4QIW L;  3FHZ A;  1EFW A;  1WOS A;  1VGX A;  1C0A A;  5C4X C;  4C3H C;  4KM8 A;  1L0W A;  1Y1V K;  2WAQ L;  2KQ1 A;  5CJ9 A;  2E2H K;  4KAS A;  2E2I A;  2NVT K;  1YCL A;  4C45 A;  3GTK A;  4KMH A;  3WOD A;  4G0V A;  2A69 A;  3GSI A;  5IP9 C;  2JA8 C;  4BBR C;  3H0G K;  1SMY A;  3CF5 S;  2FQO A;  1XXC A;  2GAG C;  2V6U A;  2GSO A;  4GTA A;  2NVQ K;  3ORE A;  5JVO A;  3M3Y K;  2VUM C;  2Y0S L;  1WQG A;  3S2D C;  3S1N C;  4NOI A;  4BY7 K;  3A8I A;  4QJV B;  1ZQ1 C;  1RU0 A;  1TWH C;  3HOV K;  4KM9 A;  5E68 A;  3K7A K;  5C4J C;  1O26 A;  4A3L C;  4A3D C;  1DCH A;  1V5V A;  3HXA A;  4G0U A;  4WJ3 M;  3RZO K;  3GTL K;  1XZP A;  2WB1 D;  2JA7 C;  3A8K A;  1ZXO A;  1WSR A;  5IYD K;  2A6H A;  1K83 A;  3PO3 C;  1ZBS A;  4OIQ A;  3L4K A;  1ISE A;  5HL8 A;  1R9T K;  4JK1 A;  1J6W A;  4OIP A;  4WFN S;  3FKI C;  3RZD C;  3V4G A;  4BXX C;  3HKZ D;  5DM6 S;  5C4X K;  3AQP A;  4GTB A;  4GZY A;  2W7V A;  4A3J C;  5FLM K;  2A68 A;  1I50 C;  3GTJ C;  1UV7 A;  2GSN A;  1GE9 A;  1O2F B;  5IP9 K;  2XCO A;  3GEE A;  2YU9 K; 
#chains in the Genus database with same CATH homology
 4BBS K;  1TWA C;  4A3M C;  5IYB C;  4BY7 C;  4A3G C;  1Y1W C;  3HOU K;  3HOY K;  3PO3 K;  2NVX C;  5IYC K;  4A3B K;  2E2I C;  1TWC K;  1TWF K;  3S1Q C;  2PPB A;  3DXJ A;  3I4M C;  4AYB D;  3S17 K;  3S1N K;  1TWG K;  3FKI K;  3RZD K;  3CQZ C;  2E2H C;  2R93 C;  4BXX K;  2R7Z K;  1TWH K;  3S16 C;  3HOX C;  3GTP C;  1WCM K;  4A3J K;  3GTO K;  5C4J K;  1IW7 A;  4XLP A;  4A3D K;  3HOW K;  2JA6 K;  5TMF A;  4A93 C;  4XSZ A;  4OIN A;  5M5W K;  4YFX A;  5M5Y K;  3S1R K;  3S1M K;  3H0G C;  3S2H K;  4ZH4 A;  5D4D A;  4KN7 A;  4A3E C;  2PA8 D;  2R92 C;  3M4O K;  3EQL A;  5M3M K;  4LK1 A;  5M3F K;  2PMZ L;  2JA7 K;  2JA5 C;  4G7O A;  3S14 K;  5C3E C;  4C3I K;  1TWA K;  4A3M K;  4G7H A;  4QIW L;  5IYB K;  4A3G K;  1Y1W K;  5C44 K;  4Q4Z A;  2E2I K;  3HOV C;  5C4X C;  2NVY C;  1SFO K;  3S1Q K;  4C3H C;  3K7A C;  3GTK C;  4X6A C;  4BY1 K;  3GTM C;  1Y1V K;  2WAQ L;  3CQZ K;  4Y52 C;  2E2H K;  2YU9 K;  4A3C C;  2B63 K;  2R93 K;  4A3K C;  3S16 K;  3HOX K;  4LLG A;  4Q5S A;  3RZO C;  2NVT K;  3GTL C;  4XSX A;  1I6V A;  1I3Q C;  1K83 C;  3WOD A;  3GTQ C;  3S15 C;  4OIR A;  3GTG K;  2A69 A;  3I4N C;  1I50 K;  3HKZ L;  4A93 K;  5IP9 C;  2JA8 C;  4BBR C;  3HOZ C;  3H0G K;  3GTJ K;  1SMY A;  5IP7 C;  4A3F C;  2E2J C;  1I6H K;  5IYD C;  4A3E K;  4A3I C;  2NVQ K;  1ZYR A;  2BE5 A;  2O5J A;  4A3B C;  4C3J K;  3M3Y K;  1R9T C;  2O5I A;  2VUM C;  2Y0S L;  2JA5 K;  3S2D C;  3S1N C;  5C3E K;  4NOI A;  2WB1 L;  4BY7 K;  1YNN A;  2NVX K;  4QJV B;  4Y7N C;  3HOV K;  1TWH C;  2NVY K;  4C2M C;  5FLM C;  3K7A K;  4C3H K;  3GTK K;  3I4M K;  4X6A K;  4YG2 A;  5C4J C;  4A3L C;  4A3D C;  3HOW C;  3S1R C;  3H3V L;  4YFN A;  4Y52 K;  4LJZ A;  4XLN A;  1HQM A;  2PMZ D;  2CW0 A;  2Y0S D;  3RZO K;  3GTP K;  3GTL K;  4MEY A;  4QIW D;  2WB1 D;  5FJ8 K;  3M4O C;  3S15 K;  4OIO A;  3PO2 C;  2JA8 K;  4BBR K;  2JA7 C;  4MEX A;  3HOZ K;  2YU9 C;  3S14 C;  4BBS C;  2E2J K;  5IYD K;  2A6H A;  3HOU C;  3HOY C;  3PO3 C;  5M5X K;  5IYC C;  4A3I K;  5C44 C;  2WAQ D;  2R92 K;  4OIQ A;  1TWC C;  3H3V D;  1TWF C;  1BDF A;  1SFO C;  1R9T K;  4JK1 A;  2A6E A;  2VUM K;  3S2D K;  3S17 C;  5TMC A;  1TWG C;  4OIP A;  4BY1 C;  2PA8 L;  3FKI C;  1YNJ A;  3RZD C;  4KN4 A;  1Y1V C;  4BXX C;  3HKZ D;  2B63 C;  2R7Z C;  5C4X K;  4Y7N K;  4KMU A;  2NVT C;  4GZY A;  4C2M K;  4QJV A;  1WCM C;  4YFK A;  4A3J C;  3GTO C;  4G7Z A;  5FLM K;  2A68 A;  3GTM K;  4A3L K;  3GTG C;  2JA6 C;  1I50 C;  4A3C K;  3S1M C;  4MQ9 A;  3S2H C;  4A3K K;  3GTJ C;  1I6H C;  4AYB L;  1I3Q K;  1K83 K;  1XPP A;  2NVQ C;  3GTQ K;  3I4N K;  4C3J C;  5IP9 K;  3PO2 K;  3M3Y C;  4LK0 A;  4A3F K;  5IP7 K;  4C3I C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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