3GTPC

Backtracked rna polymerase ii complex with 24mer rna
Total Genus 41
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
41
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural basis of transcription: backtracked RNA polymerase II at 3.4 angstrom resolution.
pubmed doi rcsb
molecule tags Transcription, transferase/dna-rna hybrid
molecule keywords DNA-directed RNA polymerase II subunit RPB1
total genus 41
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2009-03-27

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3gtpC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3gtpC01
5IYDC 4G7OA 3GTMK 4A3GC 3I4MC 1TWCK 1I50K 2VUMC 4A3LC 1TWCC 2JA8K 4BXXC 1I3QC 4G7ZA 3HOYC 3S1NC 4XSZA 4A3DC 3S16C 3GTOK 2WAQL 2WB1D 4C3IC 1Y1VK 3K7AK 5C44C 4C3IK 2R93C 4OIOA 3S1MC 4OINA 3S15K 4A3JC 3PO3K 4Y52K 4YFKA 4AYBD 5C4JK 4A3IK 5FLMK 3GTGK 3GTGC 1SMYA 5C4JC 4A3IC 4BBRC 4A3CK 4A3MK 1BDFA 4KN7A 2WB1L 5D4DA 3GTPC 2R92K 4A3GK 1TWFC 4LK1A 4A3BC 5IP7K 4X6AK 1R9TC 1I6VA 4OIPA 3CQZC 3M3YK 4A3DK 4XLPA 4OIQA 1TWGK 4C3JK 2B63C 5M5WK 3S1RK 2R7ZC 3GTLC 1HQMA 2R7ZK 1YNNA 2A6EA 3S15C 4A3EC 1TWHK 2NVTK 2Y0SD 4Y52C 3PO3C 4A3JK 4OIRA 1I6HC 1TWAC 4C3HK 3HOZK 4A3FC 4ZH4A 3HKZD 5IP9K 3WODA 5IP9C 2NVQK 2PMZL 3EQLA 5C4XK 2R92C 1XPPA 3H3VD 3S1QK 4BY7C 4QIWD 2E2HC 3GTMC 2WAQD 3PO2C 1Y1WK 3I4MK 1SFOK 3S17K 1WCMC 2R93K 3M3YC 1I50C 3CQZK 4G7HA 1WCMK 4XLNA 2CW0A 3HOWK 3GTOC 1K83K 4YG2A 4KN4A 4MQ9A 5C44K 5FJ8K 2YU9K 2O5IA 2NVXK 2JA8C 4YFXA 1TWAK 2PPBA 3HOZC 2VUMK 1I3QK 5IYCC 4KMUA 3GTQC 3HOYK 2PA8L 3S16K 2JA5K 2JA6K 5FLMC 2JA7C 3GTKK 4NOIA 2JA6C 4A3CC 4BBRK 4LK0A 3GTKC 4BY7K 4A3KK 3S1MK 4Y7NC 1Y1WC 4YFNA 5C3EK 3PO2K 3M4OK 4A3BK 4C2MC 5M3FK 4LLGA 3M4OC 2PA8D 3HOXK 4QJVB 4BBSC 4A3LK 3HOXC 2NVYC 5IYBC 3S1NK 4GZYA 3DXJA 2E2IC 5TMCA 3HOVC 3S1RC 3S2HK 5TMFA 2E2IK 5M3MK 3GTLK 3H3VL 3HOVK 4LJZA 2PMZD 3RZDC 3S2HC 3RZOK 3RZOC 3RZDK 3GTQK 2JA5C 4C3JC 1Y1VC 2A69A 3K7AC 2Y0SL 4A3KC 2NVQC 3S1QC 4A3MC 1TWHC 1YNJA 4Q5SA 4Y7NK 5C3EC 5M5XK 4A3EK 3GTPK 3S14K 3S2DK 5IP7C 4X6AC 1TWFK 4BY1K 1SFOC 3S17C 4BY1C 2NVYK 4MEYA 2O5JA 5IYBK 5C4XC 1TWGC 2B63K 1K83C 5IYDK 4XSXA 4Q4ZA 3FKIC 3I4NC 4A93K 2YU9C 1R9TK 3I4NK 3HOUK 4A93C 3FKIK 2E2JC 4MEXA 2NVXC 2NVTC 3HOUC 2BE5A 4C3HC 1I6HK 4BXXK 3HOWC 4QIWL 2A68A 5M5YK 2JA7K 3S14C 4QJVA 3S2DC 3HKZL 5IYCK 4JK1A 2E2HK 4AYBL 4C2MK 4A3FK 3GTJK 1ZYRA 1IW7A 3GTJC 3H0GK 2E2JK 4BBSK 3H0GC 2A6HA
chains in the Genus database with same CATH superfamily
4KM9A 4G7OA 3GTMK 2JA6A 1BGWA 2JA8K 1TWCC 3ADAC 3SZYA 3HOYC 4G7ZA 4XSZA 3S16C 1O2AA 3A8JA 4BLAA 2FQTA 2R93C 4OINA 4FZBA 3PO3K 4Y52K 1IBAA 5FLMK 1SMYA 5C4JC 4A3IC 4BBRC 4A3CK 2L5NA 5D4DA 3GTPC 1F7VA 3FOFA 1HI9A 4OIPA 2KPUA 1DCPA 4OIQA 2R93A 5M5WK 1DD5A 2R7ZC 1HQMA 1YNNA 4A3EC 4WFAS 2JA5A 4KDDA 1I6HC 4ZH4A 5IP9K 2NVXA 1B4AA 3GDZA 2NVQK 2R92C 1O28A 1UV7A 3Q3QA 3GTMC 2WAQD 1Y1WK 3I4MK 1XZQA 3HOWK 1B4BA 5FJ8K 5C44K 2YU9K 4YFXA 3HOZC 4M1XA 1WQFA 5FLMC 3GTKK 3PO2K 4YFNA 2ZJRS 3NUHA 4KMAA 4LLGA 2PA8D 1K83A 4IOAS 3OPFA 4GZYA 3N3YA 2E2IC 3HOVC 4KB2A 5M3MK 3GTLK 3G4AA 3H3VL 3S2HC 2PMZD 3RZOK 3GTGA 1EI6A 3GEEA 2JA5C 1FEUA 1O2BA 4KMHA 1R9TA 1Y1VC 2Y0SL 3K7AC 4A3KC 3S0XA 3GTPK 5L46A 1SFOC 3S17C 2O5JA 3GTPA 4GTLA 1USMA 1O27A 1I3QA 2B63K 2XCOA 2YU9C 3BUEA 1R9TK 2JH3A 3A8KA 4WILA 1F7UA 1IL2A 1VRQC 2V6SA 3S14C 4QJVA 2JA7A 3ERED 1X31C 1ZVUA 4O2DA 4AYBL 5HL7S 3T02A 3GTOA 3L4JA 1F9NA 3H0GC 3TFJA 2GAHC 5IOQA 4A3LC 3S1NC 3FHZA 5HQHA 5JVOA 2YU9A 1ZBSA 4C3IC 1Y1VK 3K7AK 3S15K 4OIOA 3PIPS 3GTGK 4AYBD 3DLLS 5C4JK 4A3IK 1C0AA 4AH6A 2WB1L 4P5AA 1R9TC 1I6VA 3PIOS 1Y1VA 4GTAA 3V4GA 3S1RK 4WFBS 3BP3A 1TWCA 2A6EA 1XXAA 1TWGA 1USOA 4Y52C 3PO3C 5DM7S 4C3HK 4GTEA 3L4KA 3HOZK 4GTDA 1BS2A 3WODA 5IP9C 3S1QK 5C4XK 3GTJA 3OREA 4BY7C 4QIWD 3PO2C 2ZFZA 1I50C 1WOOA 4PABA 1WCMK 1XZPB 1DCHA 4KB4A 1O26A 1EFWA 1EK8A 2JA8C 1KQ4A 1I3QK 2B63A 3LYWA 2PA8L 3S16K 3JSTA 1J6XA 3GTMA 3TTGA 3LAPA 4A3KK 3S1MK 4Y7NC 1Y1WC 3GEHA 5C3EK 4BLBA 4A3BK 4C2MC 4KASA 3M4OC 4LR2A 4BBSC 1WORA 4A3LK 3HOXC 1JOEA 2E2IK 3HOVK 3RZOC 2ZJPS 2GSOA 2CFAB 3N0BA 3N0CA 3S1QC 4A3MC 1TWHC 3S14K 2RH6A 2NVYA 1TWFK 4WF9S 3GTKA 5IORA 2NVYK 4MEYA 1L0WA 5IYBK 4XCHA 4GT9A 5IYDK 4Q4ZA 3H0GA 3I4NK 4A93C 3FKIK 2NVXC 4WJ3M 2NVTC 4C3HC 1JQWA 4BXXK 3HOWC 4QIWL 2A68A 1WQHA 5M5YK 1O29A 4JK1A 2Y3PA 2V6TA 4WFNS 2E2JC 2XCRB 5JVHS 1VH2A 4P9SA 3I4MC 1IQ0A 3LAJA 1I3QC 1TWFA 4A3DC 2RGRA 1EH1A 4WCES 2WB1D 1ZXOA 2WAQL 4LOWA 3GTOK 5C44C 4C3IK 3S1MC 4A3JC 4G0WA 1J6VA 3GTGC 5IOTA 3AQOA 4KN7A 4A3GK 1JVIA 5IP7K 4LK1A 4X6AK 1J98A 3CAGA 3TFHA 3M3YK 1YX2A 1TWGK 4C3JK 2B63C 4LQYA 1YCLA 3GTLC 3S15C 1TWHK 4OIRA 3AD7C 3GEIA 1DCOA 2E2HC 2V6UA 5EGEA 1WOPA 1ZQ1C 1SFOK 3S17K 1WCMC 3CQZK 4GTFA 3GTOC 1K83K 4YG2A 2VUMK 4KMDA 1TWAK 2PPBA 4KMUA 2EBBA 2JA7C 5TJ3A 2JA6C 4A3CC 4BBRK 5HL8A 4BY7K 2VUMA 1XZQB 1F93A 3M4OK 5M3FK 2L3UA 3HOXK 2NVYC 5IYBC 5JFEA 4G0VA 3CQZA 1SFOA 3QX3A 2KQ1A 3RZDC 1PJ5A 3GTQK 3CF5S 2FQOA 4BKWA 4GTBA 3A8IA 2NVQC 3SZZA 1YNJA 4Y7NK 3S2DK 5C3EC 5M5XK 2GSUA 2P5MA 5IP7C 4X6AC 2W7VA 4C45A 2P8TA 4BY1K 2GAGC 5C4XC 3AD9C 1TWGC 1K83C 3I4NC 3FKIC 4A93K 3HOUK 1IE0A 2E2HA 1I6HK 1WCMA 2JA7K 2XCQA 5DM6S 1VLOA 4P5BA 5CHPA 5IYCK 3T01A 2E2HK 4KM8A 4A3FK 3GTJK 4PAAA 3TFIA 2E2JK 5IOSA 4G0UA 5IYDC 4A3GC 4KATA 2ZUEA 1TWCK 1WIHA 1VJEA 1I50K 2VUMC 4KARA 4BXXC 1WSRA 2KXYA 4IO9S 1VGXA 2R92A 4YFKA 1G51A 3T00A 3FOEA 4A3MK 1BDFA 2R92K 2CFAA 1WSVA 1TWFC 1EQRA 4A3BC 1GE9A 4J3NA 3VA7A 3CQZC 4FM9A 4A3DK 4WJ4A 4XLPA 1TWHA 1I50A 1WOSA 2R7ZK 2R93K 2NVTK 2Y0SD 4A3JK 1TWAC 4GTCA 4A3FC 3HKZD 3OEPA 2PMZL 3EQLA 1XPPA 3H3VD 5JVGS 4RMFA 2E2IA 1XZPA 3M3YC 4G7HA 1PJ6A 1Y1WA 4XLNA 4U67S 1IS1A 3GIRA 2CW0A 4KN4A 4MQ9A 2O5IA 2NVXK 4KAWX 3HOYK 5IYCC 4KC6A 3GTQC 2JA5K 2JA6K 3GSIA 4NOIA 4LK0A 3GTKC 4DDQA 1BJTA 3AQPA 2D6FC 1O25A 2ZJQS 3AH5A 1O2FB 4QJVB 3S1NK 3DXJA 3HXAA 5TMCA 3S1RC 3LPXA 3GTQA 3S2HK 5TMFA 4LJZA 1RU0A 3GTLA 1V5VA 2KWAA 4IOCS 3RZDK 1AB4A 5EGHA 3FKIA 4C3JC 2A69A 2PHCB 5CJ9A 3BP8C 4A3EK 4Q5SA 2R7ZA 4BY1C 1PJ7A 4ILDA 1INNA 2GSNA 1TWAA 4XSXA 1WQGA 1XXBA 4GFQA 1ISEA 4MEXA 3HOUC 2BE5A 1J6WA 3AD8C 5E68A 3S2DC 2ZUFA 3IPJA 3HKZL 1O24A 3G4CA 4C2MK 1ZYRA 1IW7A 3GTJC 3H0GK 3MMLB 4BBSK 1XXCA 2A6HA
chains in the Genus database with same CATH topology
5IYDC 4G7OA 3GTMK 4A3GC 3I4MC 1TWCK 1I50K 2VUMC 4A3LC 1TWCC 2JA8K 4BXXC 1I3QC 4G7ZA 3HOYC 3S1NC 4XSZA 4A3DC 3S16C 3GTOK 2WAQL 2WB1D 4C3IC 1Y1VK 3K7AK 5C44C 4C3IK 2R93C 4OIOA 3S1MC 4OINA 3S15K 4A3JC 3PO3K 4Y52K 4YFKA 4AYBD 5C4JK 4A3IK 5FLMK 3GTGK 3GTGC 1SMYA 5C4JC 4A3IC 4BBRC 4A3CK 4A3MK 1BDFA 4KN7A 2WB1L 5D4DA 3GTPC 2R92K 4A3GK 1TWFC 4LK1A 4A3BC 5IP7K 4X6AK 1R9TC 1I6VA 4OIPA 3CQZC 3M3YK 4A3DK 4XLPA 4OIQA 1TWGK 4C3JK 2B63C 5M5WK 3S1RK 2R7ZC 3GTLC 1HQMA 2R7ZK 1YNNA 2A6EA 3S15C 4A3EC 1TWHK 2NVTK 2Y0SD 4Y52C 3PO3C 4A3JK 4OIRA 1I6HC 1TWAC 4C3HK 3HOZK 4A3FC 4ZH4A 3HKZD 5IP9K 3WODA 5IP9C 2NVQK 2PMZL 3EQLA 5C4XK 2R92C 1XPPA 3H3VD 3S1QK 4BY7C 4QIWD 2E2HC 3GTMC 2WAQD 3PO2C 1Y1WK 3I4MK 1SFOK 3S17K 1WCMC 2R93K 3M3YC 1I50C 3CQZK 4G7HA 1WCMK 4XLNA 2CW0A 3HOWK 3GTOC 1K83K 4YG2A 4KN4A 4MQ9A 5C44K 5FJ8K 2YU9K 2O5IA 2NVXK 2JA8C 4YFXA 1TWAK 2PPBA 3HOZC 2VUMK 1I3QK 5IYCC 4KMUA 3GTQC 3HOYK 2PA8L 3S16K 2JA5K 2JA6K 5FLMC 2JA7C 3GTKK 4NOIA 2JA6C 4A3CC 4BBRK 4LK0A 3GTKC 4BY7K 4A3KK 3S1MK 4Y7NC 1Y1WC 4YFNA 5C3EK 3PO2K 3M4OK 4A3BK 4C2MC 5M3FK 4LLGA 3M4OC 2PA8D 3HOXK 4QJVB 4BBSC 4A3LK 3HOXC 2NVYC 5IYBC 3S1NK 4GZYA 3DXJA 2E2IC 5TMCA 3HOVC 3S1RC 3S2HK 5TMFA 2E2IK 5M3MK 3GTLK 3H3VL 3HOVK 4LJZA 2PMZD 3RZDC 3S2HC 3RZOK 3RZOC 3RZDK 3GTQK 2JA5C 4C3JC 1Y1VC 2A69A 3K7AC 2Y0SL 4A3KC 2NVQC 3S1QC 4A3MC 1TWHC 1YNJA 4Q5SA 4Y7NK 5C3EC 5M5XK 4A3EK 3GTPK 3S14K 3S2DK 5IP7C 4X6AC 1TWFK 4BY1K 1SFOC 3S17C 4BY1C 2NVYK 4MEYA 2O5JA 5IYBK 5C4XC 1TWGC 2B63K 1K83C 5IYDK 4XSXA 4Q4ZA 3FKIC 3I4NC 4A93K 2YU9C 1R9TK 3I4NK 3HOUK 4A93C 3FKIK 2E2JC 4MEXA 2NVXC 2NVTC 3HOUC 2BE5A 4C3HC 1I6HK 4BXXK 3HOWC 4QIWL 2A68A 5M5YK 2JA7K 3S14C 4QJVA 3S2DC 3HKZL 5IYCK 4JK1A 2E2HK 4AYBL 4C2MK 4A3FK 3GTJK 1ZYRA 1IW7A 3GTJC 3H0GK 2E2JK 4BBSK 3H0GC 2A6HA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5IYD C;  4G7O A;  3GTM K;  4A3G C;  3I4M C;  1TWC K;  1I50 K;  2VUM C;  4A3L C;  1TWC C;  2JA8 K;  4BXX C;  1I3Q C;  4G7Z A;  3HOY C;  3S1N C;  4XSZ A;  4A3D C;  3S16 C;  3GTO K;  2WAQ L;  2WB1 D;  4C3I C;  1Y1V K;  3K7A K;  5C44 C;  4C3I K;  2R93 C;  4OIO A;  3S1M C;  4OIN A;  3S15 K;  4A3J C;  3PO3 K;  4Y52 K;  4YFK A;  4AYB D;  5C4J K;  4A3I K;  5FLM K;  3GTG K;  3GTG C;  1SMY A;  5C4J C;  4A3I C;  4BBR C;  4A3C K;  4A3M K;  1BDF A;  4KN7 A;  2WB1 L;  5D4D A;  3GTP C;  2R92 K;  4A3G K;  1TWF C;  4LK1 A;  4A3B C;  5IP7 K;  4X6A K;  1R9T C;  1I6V A;  4OIP A;  3CQZ C;  3M3Y K;  4A3D K;  4XLP A;  4OIQ A;  1TWG K;  4C3J K;  2B63 C;  5M5W K;  3S1R K;  2R7Z C;  3GTL C;  1HQM A;  2R7Z K;  1YNN A;  2A6E A;  3S15 C;  4A3E C;  1TWH K;  2NVT K;  2Y0S D;  4Y52 C;  3PO3 C;  4A3J K;  4OIR A;  1I6H C;  1TWA C;  4C3H K;  3HOZ K;  4A3F C;  4ZH4 A;  3HKZ D;  5IP9 K;  3WOD A;  5IP9 C;  2NVQ K;  2PMZ L;  3EQL A;  5C4X K;  2R92 C;  1XPP A;  3H3V D;  3S1Q K;  4BY7 C;  4QIW D;  2E2H C;  3GTM C;  2WAQ D;  3PO2 C;  1Y1W K;  3I4M K;  1SFO K;  3S17 K;  1WCM C;  2R93 K;  3M3Y C;  1I50 C;  3CQZ K;  4G7H A;  1WCM K;  4XLN A;  2CW0 A;  3HOW K;  3GTO C;  1K83 K;  4YG2 A;  4KN4 A;  4MQ9 A;  5C44 K;  5FJ8 K;  2YU9 K;  2O5I A;  2NVX K;  2JA8 C;  4YFX A;  1TWA K;  2PPB A;  3HOZ C;  2VUM K;  1I3Q K;  5IYC C;  4KMU A;  3GTQ C;  3HOY K;  2PA8 L;  3S16 K;  2JA5 K;  2JA6 K;  5FLM C;  2JA7 C;  3GTK K;  4NOI A;  2JA6 C;  4A3C C;  4BBR K;  4LK0 A;  3GTK C;  4BY7 K;  4A3K K;  3S1M K;  4Y7N C;  1Y1W C;  4YFN A;  5C3E K;  3PO2 K;  3M4O K;  4A3B K;  4C2M C;  5M3F K;  4LLG A;  3M4O C;  2PA8 D;  3HOX K;  4QJV B;  4BBS C;  4A3L K;  3HOX C;  2NVY C;  5IYB C;  3S1N K;  4GZY A;  3DXJ A;  2E2I C;  5TMC A;  3HOV C;  3S1R C;  3S2H K;  5TMF A;  2E2I K;  5M3M K;  3GTL K;  3H3V L;  3HOV K;  4LJZ A;  2PMZ D;  3RZD C;  3S2H C;  3RZO K;  3RZO C;  3RZD K;  3GTQ K;  2JA5 C;  4C3J C;  1Y1V C;  2A69 A;  3K7A C;  2Y0S L;  4A3K C;  2NVQ C;  3S1Q C;  4A3M C;  1TWH C;  1YNJ A;  4Q5S A;  4Y7N K;  5C3E C;  5M5X K;  4A3E K;  3GTP K;  3S14 K;  3S2D K;  5IP7 C;  4X6A C;  1TWF K;  4BY1 K;  1SFO C;  3S17 C;  4BY1 C;  2NVY K;  4MEY A;  2O5J A;  5IYB K;  5C4X C;  1TWG C;  2B63 K;  1K83 C;  5IYD K;  4XSX A;  4Q4Z A;  3FKI C;  3I4N C;  4A93 K;  2YU9 C;  1R9T K;  3I4N K;  3HOU K;  4A93 C;  3FKI K;  2E2J C;  4MEX A;  2NVX C;  2NVT C;  3HOU C;  2BE5 A;  4C3H C;  1I6H K;  4BXX K;  3HOW C;  4QIW L;  2A68 A;  5M5Y K;  2JA7 K;  3S14 C;  4QJV A;  3S2D C;  3HKZ L;  5IYC K;  4JK1 A;  2E2H K;  4AYB L;  4C2M K;  4A3F K;  3GTJ K;  1ZYR A;  1IW7 A;  3GTJ C;  3H0G K;  2E2J K;  4BBS K;  3H0G C;  2A6H A; 
#chains in the Genus database with same CATH topology
 4KM9 A;  4G7O A;  3GTM K;  2JA6 A;  1BGW A;  2JA8 K;  1TWC C;  3ADA C;  3SZY A;  3HOY C;  4G7Z A;  4XSZ A;  3S16 C;  1O2A A;  3A8J A;  4BLA A;  2FQT A;  2R93 C;  4OIN A;  4FZB A;  3PO3 K;  4Y52 K;  1IBA A;  5FLM K;  1SMY A;  5C4J C;  4A3I C;  4BBR C;  4A3C K;  2L5N A;  5D4D A;  3GTP C;  1F7V A;  3FOF A;  1HI9 A;  4OIP A;  2KPU A;  1DCP A;  4OIQ A;  2R93 A;  5M5W K;  1DD5 A;  2R7Z C;  1HQM A;  1YNN A;  4A3E C;  4WFA S;  2JA5 A;  4KDD A;  1I6H C;  4ZH4 A;  5IP9 K;  2NVX A;  1B4A A;  3GDZ A;  2NVQ K;  2R92 C;  1O28 A;  1UV7 A;  3Q3Q A;  3GTM C;  2WAQ D;  1Y1W K;  3I4M K;  1XZQ A;  3HOW K;  1B4B A;  5FJ8 K;  5C44 K;  2YU9 K;  4YFX A;  3HOZ C;  4M1X A;  1WQF A;  5FLM C;  3GTK K;  3PO2 K;  4YFN A;  2ZJR S;  3NUH A;  4KMA A;  4LLG A;  2PA8 D;  1K83 A;  4IOA S;  3OPF A;  4GZY A;  3N3Y A;  2E2I C;  3HOV C;  4KB2 A;  5M3M K;  3GTL K;  3G4A A;  3H3V L;  3S2H C;  2PMZ D;  3RZO K;  3GTG A;  1EI6 A;  3GEE A;  2JA5 C;  1FEU A;  1O2B A;  4KMH A;  1R9T A;  1Y1V C;  2Y0S L;  3K7A C;  4A3K C;  3S0X A;  3GTP K;  5L46 A;  1SFO C;  3S17 C;  2O5J A;  3GTP A;  4GTL A;  1USM A;  1O27 A;  1I3Q A;  2B63 K;  2XCO A;  2YU9 C;  3BUE A;  1R9T K;  2JH3 A;  3A8K A;  4WIL A;  1F7U A;  1IL2 A;  1VRQ C;  2V6S A;  3S14 C;  4QJV A;  2JA7 A;  3ERE D;  1X31 C;  1ZVU A;  4O2D A;  4AYB L;  5HL7 S;  3T02 A;  3GTO A;  3L4J A;  1F9N A;  3H0G C;  3TFJ A;  2GAH C;  5IOQ A;  4A3L C;  3S1N C;  3FHZ A;  5HQH A;  5JVO A;  2YU9 A;  1ZBS A;  4C3I C;  1Y1V K;  3K7A K;  3S15 K;  4OIO A;  3PIP S;  3GTG K;  4AYB D;  3DLL S;  5C4J K;  4A3I K;  1C0A A;  4AH6 A;  2WB1 L;  4P5A A;  1R9T C;  1I6V A;  3PIO S;  1Y1V A;  4GTA A;  3V4G A;  3S1R K;  4WFB S;  3BP3 A;  1TWC A;  2A6E A;  1XXA A;  1TWG A;  1USO A;  4Y52 C;  3PO3 C;  5DM7 S;  4C3H K;  4GTE A;  3L4K A;  3HOZ K;  4GTD A;  1BS2 A;  3WOD A;  5IP9 C;  3S1Q K;  5C4X K;  3GTJ A;  3ORE A;  4BY7 C;  4QIW D;  3PO2 C;  2ZFZ A;  1I50 C;  1WOO A;  4PAB A;  1WCM K;  1XZP B;  1DCH A;  4KB4 A;  1O26 A;  1EFW A;  1EK8 A;  2JA8 C;  1KQ4 A;  1I3Q K;  2B63 A;  3LYW A;  2PA8 L;  3S16 K;  3JST A;  1J6X A;  3GTM A;  3TTG A;  3LAP A;  4A3K K;  3S1M K;  4Y7N C;  1Y1W C;  3GEH A;  5C3E K;  4BLB A;  4A3B K;  4C2M C;  4KAS A;  3M4O C;  4LR2 A;  4BBS C;  1WOR A;  4A3L K;  3HOX C;  1JOE A;  2E2I K;  3HOV K;  3RZO C;  2ZJP S;  2GSO A;  2CFA B;  3N0B A;  3N0C A;  3S1Q C;  4A3M C;  1TWH C;  3S14 K;  2RH6 A;  2NVY A;  1TWF K;  4WF9 S;  3GTK A;  5IOR A;  2NVY K;  4MEY A;  1L0W A;  5IYB K;  4XCH A;  4GT9 A;  5IYD K;  4Q4Z A;  3H0G A;  3I4N K;  4A93 C;  3FKI K;  2NVX C;  4WJ3 M;  2NVT C;  4C3H C;  1JQW A;  4BXX K;  3HOW C;  4QIW L;  2A68 A;  1WQH A;  5M5Y K;  1O29 A;  4JK1 A;  2Y3P A;  2V6T A;  4WFN S;  2E2J C;  2XCR B;  5JVH S;  1VH2 A;  4P9S A;  3I4M C;  1IQ0 A;  3LAJ A;  1I3Q C;  1TWF A;  4A3D C;  2RGR A;  1EH1 A;  4WCE S;  2WB1 D;  1ZXO A;  2WAQ L;  4LOW A;  3GTO K;  5C44 C;  4C3I K;  3S1M C;  4A3J C;  4G0W A;  1J6V A;  3GTG C;  5IOT A;  3AQO A;  4KN7 A;  4A3G K;  1JVI A;  5IP7 K;  4LK1 A;  4X6A K;  1J98 A;  3CAG A;  3TFH A;  3M3Y K;  1YX2 A;  1TWG K;  4C3J K;  2B63 C;  4LQY A;  1YCL A;  3GTL C;  3S15 C;  1TWH K;  4OIR A;  3AD7 C;  3GEI A;  1DCO A;  2E2H C;  2V6U A;  5EGE A;  1WOP A;  1ZQ1 C;  1SFO K;  3S17 K;  1WCM C;  3CQZ K;  4GTF A;  3GTO C;  1K83 K;  4YG2 A;  2VUM K;  4KMD A;  1TWA K;  2PPB A;  4KMU A;  2EBB A;  2JA7 C;  5TJ3 A;  2JA6 C;  4A3C C;  4BBR K;  5HL8 A;  4BY7 K;  2VUM A;  1XZQ B;  1F93 A;  3M4O K;  5M3F K;  2L3U A;  3HOX K;  2NVY C;  5IYB C;  5JFE A;  4G0V A;  3CQZ A;  1SFO A;  3QX3 A;  2KQ1 A;  3RZD C;  1PJ5 A;  3GTQ K;  3CF5 S;  2FQO A;  4BKW A;  4GTB A;  3A8I A;  2NVQ C;  3SZZ A;  1YNJ A;  4Y7N K;  3S2D K;  5C3E C;  5M5X K;  2GSU A;  2P5M A;  5IP7 C;  4X6A C;  2W7V A;  4C45 A;  2P8T A;  4BY1 K;  2GAG C;  5C4X C;  3AD9 C;  1TWG C;  1K83 C;  3I4N C;  3FKI C;  4A93 K;  3HOU K;  1IE0 A;  2E2H A;  1I6H K;  1WCM A;  2JA7 K;  2XCQ A;  5DM6 S;  1VLO A;  4P5B A;  5CHP A;  5IYC K;  3T01 A;  2E2H K;  4KM8 A;  4A3F K;  3GTJ K;  4PAA A;  3TFI A;  2E2J K;  5IOS A;  4G0U A;  5IYD C;  4A3G C;  4KAT A;  2ZUE A;  1TWC K;  1WIH A;  1VJE A;  1I50 K;  2VUM C;  4KAR A;  4BXX C;  1WSR A;  2KXY A;  4IO9 S;  1VGX A;  2R92 A;  4YFK A;  1G51 A;  3T00 A;  3FOE A;  4A3M K;  1BDF A;  2R92 K;  2CFA A;  1WSV A;  1TWF C;  1EQR A;  4A3B C;  1GE9 A;  4J3N A;  3VA7 A;  3CQZ C;  4FM9 A;  4A3D K;  4WJ4 A;  4XLP A;  1TWH A;  1I50 A;  1WOS A;  2R7Z K;  2R93 K;  2NVT K;  2Y0S D;  4A3J K;  1TWA C;  4GTC A;  4A3F C;  3HKZ D;  3OEP A;  2PMZ L;  3EQL A;  1XPP A;  3H3V D;  5JVG S;  4RMF A;  2E2I A;  1XZP A;  3M3Y C;  4G7H A;  1PJ6 A;  1Y1W A;  4XLN A;  4U67 S;  1IS1 A;  3GIR A;  2CW0 A;  4KN4 A;  4MQ9 A;  2O5I A;  2NVX K;  4KAW X;  3HOY K;  5IYC C;  4KC6 A;  3GTQ C;  2JA5 K;  2JA6 K;  3GSI A;  4NOI A;  4LK0 A;  3GTK C;  4DDQ A;  1BJT A;  3AQP A;  2D6F C;  1O25 A;  2ZJQ S;  3AH5 A;  1O2F B;  4QJV B;  3S1N K;  3DXJ A;  3HXA A;  5TMC A;  3S1R C;  3LPX A;  3GTQ A;  3S2H K;  5TMF A;  4LJZ A;  1RU0 A;  3GTL A;  1V5V A;  2KWA A;  4IOC S;  3RZD K;  1AB4 A;  5EGH A;  3FKI A;  4C3J C;  2A69 A;  2PHC B;  5CJ9 A;  3BP8 C;  4A3E K;  4Q5S A;  2R7Z A;  4BY1 C;  1PJ7 A;  4ILD A;  1INN A;  2GSN A;  1TWA A;  4XSX A;  1WQG A;  1XXB A;  4GFQ A;  1ISE A;  4MEX A;  3HOU C;  2BE5 A;  1J6W A;  3AD8 C;  5E68 A;  3S2D C;  2ZUF A;  3IPJ A;  3HKZ L;  1O24 A;  3G4C A;  4C2M K;  1ZYR A;  1IW7 A;  3GTJ C;  3H0G K;  3MML B;  4BBS K;  1XXC A;  2A6H A; 
#chains in the Genus database with same CATH homology
 5IYD C;  4G7O A;  3GTM K;  4A3G C;  3I4M C;  1TWC K;  1I50 K;  2VUM C;  4A3L C;  1TWC C;  2JA8 K;  4BXX C;  1I3Q C;  4G7Z A;  3HOY C;  3S1N C;  4XSZ A;  4A3D C;  3S16 C;  3GTO K;  2WAQ L;  2WB1 D;  4C3I C;  1Y1V K;  3K7A K;  5C44 C;  4C3I K;  2R93 C;  4OIO A;  3S1M C;  4OIN A;  3S15 K;  4A3J C;  3PO3 K;  4Y52 K;  4YFK A;  4AYB D;  5C4J K;  4A3I K;  5FLM K;  3GTG K;  3GTG C;  1SMY A;  5C4J C;  4A3I C;  4BBR C;  4A3C K;  4A3M K;  1BDF A;  4KN7 A;  2WB1 L;  5D4D A;  3GTP C;  2R92 K;  4A3G K;  1TWF C;  4LK1 A;  4A3B C;  5IP7 K;  4X6A K;  1R9T C;  1I6V A;  4OIP A;  3CQZ C;  3M3Y K;  4A3D K;  4XLP A;  4OIQ A;  1TWG K;  4C3J K;  2B63 C;  5M5W K;  3S1R K;  2R7Z C;  3GTL C;  1HQM A;  2R7Z K;  1YNN A;  2A6E A;  3S15 C;  4A3E C;  1TWH K;  2NVT K;  2Y0S D;  4Y52 C;  3PO3 C;  4A3J K;  4OIR A;  1I6H C;  1TWA C;  4C3H K;  3HOZ K;  4A3F C;  4ZH4 A;  3HKZ D;  5IP9 K;  3WOD A;  5IP9 C;  2NVQ K;  2PMZ L;  3EQL A;  5C4X K;  2R92 C;  1XPP A;  3H3V D;  3S1Q K;  4BY7 C;  4QIW D;  2E2H C;  3GTM C;  2WAQ D;  3PO2 C;  1Y1W K;  3I4M K;  1SFO K;  3S17 K;  1WCM C;  2R93 K;  3M3Y C;  1I50 C;  3CQZ K;  4G7H A;  1WCM K;  4XLN A;  2CW0 A;  3HOW K;  3GTO C;  1K83 K;  4YG2 A;  4KN4 A;  4MQ9 A;  5C44 K;  5FJ8 K;  2YU9 K;  2O5I A;  2NVX K;  2JA8 C;  4YFX A;  1TWA K;  2PPB A;  3HOZ C;  2VUM K;  1I3Q K;  5IYC C;  4KMU A;  3GTQ C;  3HOY K;  2PA8 L;  3S16 K;  2JA5 K;  2JA6 K;  5FLM C;  2JA7 C;  3GTK K;  4NOI A;  2JA6 C;  4A3C C;  4BBR K;  4LK0 A;  3GTK C;  4BY7 K;  4A3K K;  3S1M K;  4Y7N C;  1Y1W C;  4YFN A;  5C3E K;  3PO2 K;  3M4O K;  4A3B K;  4C2M C;  5M3F K;  4LLG A;  3M4O C;  2PA8 D;  3HOX K;  4QJV B;  4BBS C;  4A3L K;  3HOX C;  2NVY C;  5IYB C;  3S1N K;  4GZY A;  3DXJ A;  2E2I C;  5TMC A;  3HOV C;  3S1R C;  3S2H K;  5TMF A;  2E2I K;  5M3M K;  3GTL K;  3H3V L;  3HOV K;  4LJZ A;  2PMZ D;  3RZD C;  3S2H C;  3RZO K;  3RZO C;  3RZD K;  3GTQ K;  2JA5 C;  4C3J C;  1Y1V C;  2A69 A;  3K7A C;  2Y0S L;  4A3K C;  2NVQ C;  3S1Q C;  4A3M C;  1TWH C;  1YNJ A;  4Q5S A;  4Y7N K;  5C3E C;  5M5X K;  4A3E K;  3GTP K;  3S14 K;  3S2D K;  5IP7 C;  4X6A C;  1TWF K;  4BY1 K;  1SFO C;  3S17 C;  4BY1 C;  2NVY K;  4MEY A;  2O5J A;  5IYB K;  5C4X C;  1TWG C;  2B63 K;  1K83 C;  5IYD K;  4XSX A;  4Q4Z A;  3FKI C;  3I4N C;  4A93 K;  2YU9 C;  1R9T K;  3I4N K;  3HOU K;  4A93 C;  3FKI K;  2E2J C;  4MEX A;  2NVX C;  2NVT C;  3HOU C;  2BE5 A;  4C3H C;  1I6H K;  4BXX K;  3HOW C;  4QIW L;  2A68 A;  5M5Y K;  2JA7 K;  3S14 C;  4QJV A;  3S2D C;  3HKZ L;  5IYC K;  4JK1 A;  2E2H K;  4AYB L;  4C2M K;  4A3F K;  3GTJ K;  1ZYR A;  1IW7 A;  3GTJ C;  3H0G K;  2E2J K;  4BBS K;  3H0G C;  2A6H A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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