3GTPC

Backtracked rna polymerase ii complex with 24mer rna
Total Genus 41
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
41
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural basis of transcription: backtracked RNA polymerase II at 3.4 angstrom resolution.
pubmed doi rcsb
molecule tags Transcription, transferase/dna-rna hybrid
molecule keywords DNA-directed RNA polymerase II subunit RPB1
total genus 41
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2009-03-27

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3gtpC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3gtpC01
3GTLK 4QIWL 3S1RK 4C3HK 4C3IK 4A3MK 3GTMK 3GTQK 3GTKK 3FKIC 3S2HK 2R92K 3GTLC 2E2JK 3S17K 3S1RC 4A3MC 2NVTK 1TWAK 3GTQC 3HOZC 3I4MK 4KMUA 4OINA 2O5IA 1YNNA 3HKZD 2E2JC 2R92C 3S17C 4A3GC 5IYCK 2NVXK 2NVTC 4A3CK 2R93K 4BBRC 4XSZA 1I6HK 5IYCC 3S1QK 1IW7A 3CQZK 3HOXC 3RZOK 2PA8L 3S2DK 5M3FK 3S14K 4YFXA 4A3KC 4QJVA 2WAQD 3S1QC 4G7HA 3RZOC 3S2DC 1I6HC 4BY1K 1TWHK 4X6AK 1TWGC 4A3DK 3S14C 4NOIA 3GTJK 5IYBK 4MEYA 4X6AC 5FJ8K 4BY1C 4G7ZA 1HQMA 5M3MK 3FKIK 3HKZL 3HOYK 4A3DC 3GTJC 4Y7NK 4GZYA 4G7OA 4OIQA 5FLMK 5IYBC 2JA6K 4Q4ZA 3HOVK 2R7ZK 1BDFA 2JA7C 4A93K 3HOZK 3HOYC 5C4JC 4Y7NC 2JA6C 3HOVC 4A3GK 5FLMC 2WB1D 2R7ZC 4A3BC 4BBRK 4A93C 2WAQL 3HOUC 3M4OK 4YFNA 3K7AK 4XSXA 3HOXK 1Y1VC 4XLNA 5IP9K 4C2MK 5C3EK 4Q5SA 3DXJA 2NVYK 3M3YC 4A3KK 3H3VD 3M4OC 3GTPK 3K7AC 5C3EC 5IP9C 4C2MC 1SFOC 1TWGK 2NVYC 3GTPC 2BE5A 4KN7A 5IP7C 4A3IK 4A3JC 2WB1L 1I50C 5IYDC 4Y52K 2PMZD 2O5JA 1TWCK 3PO2K 2JA7K 1Y1WC 5C4JK 1SMYA 4A3IC 4Y52C 1ZYRA 4LK0A 1TWCC 4AYBD 3PO2C 1R9TK 3H3VL 4C3JK 3HOUK 4A3BK 5M5YK 3PO3C 4QIWD 1Y1VK 2VUMC 3S16C 2R93C 5M5WK 1R9TC 3EQLA 4C3JC 5C44K 3M3YK 2A6HA 1K83C 2Y0SD 4A3LC 5D4DA 1SFOK 4BY7K 2JA8C 1I3QC 3S15K 2PMZL 4LJZA 5C44C 2YU9C 2A6EA 1YNJA 3RZDC 4ZH4A 5IP7K 4BY7C 4BXXK 4LLGA 4MEXA 4KN4A 3S15C 1I50K 4A3JK 5IYDK 4AYBL 4JK1A 1I6VA 3S1NK 2JA5C 3GTOC 1Y1WK 1TWFC 4BXXC 4A3FK 3I4NK 3HOWK 1WCMK 4OIOA 2A68A 3S1NC 3H0GK 2PPBA 2Y0SL 2B63K 2E2IK 3WODA 4A3FC 3I4NC 4C3HC 4C3IC 3HOWC 3PO3K 2VUMK 1WCMC 3GTMC 2NVQK 3S16K 3H0GC 4MQ9A 3GTKC 5TMCA 4OIRA 2B63C 2A69A 3S2HC 2E2IC 1K83K 2E2HK 4A3LK 1TWAC 2NVQC 5C4XK 2JA8K 1I3QK 5M5XK 3I4MC 2YU9K 4YG2A 4LK1A 4OIPA 4YFKA 2E2HC 2NVXC 4A3EK 4A3CC 3RZDK 4XLPA 5C4XC 3GTGK 4BBSK 5TMFA 3S1MK 3CQZC 4A3EC 4QJVB 2JA5K 3GTOK 1TWFK 3GTGC 4BBSC 2CW0A 1XPPA 3S1MC 1TWHC 2PA8D
chains in the Genus database with same CATH superfamily
4C3HK 3L4JA 1WQFA 3PIPS 4P9SA 3FKIC 2KWAA 3GTLC 2E2JK 3S17K 4A3MC 1VJEA 1TWAK 1XZQB 3GIRA 4BLBA 3GTQC 3I4MK 4KMUA 2O5IA 5IYCK 3HKZD 1EFWA 3G4AA 4BBRC 3LAJA 3S1QK 2R92A 2KQ1A 4KM9A 4GTBA 3S14K 4KM8A 4X6AK 4BY1K 4G7HA 3RZOC 4GTDA 1TWHK 1G51A 4KASA 5IYBK 2XCQA 1HQMA 1IQ0A 1X31C 3N0CA 2JA6K 4C45A 2R7ZK 3LYWA 4M1XA 3HOZK 5C4JC 3N3YA 3GTJA 2WB1D 3AQOA 2JA7A 4IOCS 5C3EK 4Q5SA 2RGRA 1IE0A 3M3YC 4A3KK 1UV7A 3K7AC 5IP9C 4GTCA 1TWGK 4U67S 2XCRB 2GSUA 1O25A 4G0VA 3GEHA 2BE5A 5IP7C 5DM6S 4A3JC 5IYDC 4GFQA 3GTPA 2O5JA 3PO2K 1Y1WC 4A3IC 1F9NA 4BKWA 1XXAA 4GTLA 3ERED 2VUMC 3IPJA 3S16C 1TWCA 3EQLA 1WOPA 2ZUFA 2JA8C 1R9TA 3A8JA 4ZH4A 4BXXK 2YU9A 1I6VA 3LAPA 3GTOC 1PJ6A 4WCES 1PJ7A 4A3FK 3I4NK 3HOWK 1O27A 4OIOA 3S1NC 2PPBA 2Y0SL 4P5BA 1ISEA 4C3HC 1I50A 1WCMC 2JH3A 2B63C 2E2HK 1K83K 3OREA 4A3LK 1TWAC 5HL8A 3H0GA 1I3QK 1F7VA 3I4MC 3LPXA 1INNA 1ZQ1C 5TMFA 2NVXA 4KDDA 1TWFK 1F93A 5JVHS 3GTGC 4BBSC 3V4GA 2CW0A 1WOSA 3CQZA 4IOAS 1TWHC 4QIWL 3BP8C 1F7UA 4C3IK 1WORA 3GTMK 3GTKK 4G0WA 3S2HK 2R92K 3GEEA 3S1RC 1O24A 1ZBSA 3HOZC 3FKIA 3GTLA 1RU0A 2NVTC 3HXAA 4LOWA 3GTQA 4XSZA 1I6HK 4IO9S 1IW7A 2KXYA 5M3FK 2FQTA 1VGXA 4PAAA 4A3KC 2WAQD 3S2DC 1TWGC 4A3DK 3GTJK 4KMHA 3TFHA 4G7ZA 3BP3A 5JVGS 1WQGA 3A8IA 4BLAA 4PABA 3HOVK 5FLMK 1L0WA 1BDFA 4A93K 3HOYC 2D6FC 3NUHA 4Y7NC 1DD5A 4YFNA 3GTPK 3H3VD 3M4OC 2PHCB 3TFIA 4C2MC 1IBAA 5HQHA 2NVYC 1O2AA 3QX3A 4LQYA 2PMZD 1TWCK 1BGWA 3T02A 3SZYA 4Y52C 1ZYRA 4AYBD 1R9TK 3HOUK 1Y1WA 1Y1VK 4QIWD 2Y3PA 2R93C 4C3JC 1O29A 5C44K 2A6HA 1K83C 2EBBA 2CFAA 4A3LC 1SFOK 2VUMA 4BY7K 3S15K 1I3QC 4LJZA 2A6EA 2V6UA 1EI6A 4KN4A 1I50K 1JQWA 5IORA 1J6VA 1TWFC 5TJ3A 2GSNA 3H0GK 4KB4A 1O28A 4WJ4A 4C3IC 4WFBS 5L46A 2NVQK 3GTMC 1WSVA 3GTKC 3CF5S 3S2HC 4OIRA 2E2IC 3ADAC 1WCMA 5JFEA 2B63A 4YFKA 3RZDK 1TWAA 4ILDA 5C4XC 3S1MK 4A3EC 3FHZA 3Q3QA 1USMA 4GT9A 3GTLK 3GSIA 3GTGA 2RH6A 4A3MK 3GTQK 1TWHA 2JA5A 1EH1A 4LR2A 4OINA 1BJTA 2E2JC 3S17C 1GE9A 4A3CK 5IYCC 3RZOK 2PA8L 4J3NA 3S0XA 2XCOA 4QJVA 3S1QC 1WSRA 4GTFA 5CJ9A 3MMLB 3S14C 4NOIA 2KPUA 4MEYA 4X6AC 2GAHC 4BY1C 4KAWX 4P5AA 5M3MK 1C0AA 3HKZL 1TWGA 4GZYA 4G7OA 4OIQA 1DCPA 5IYBC 4Q4ZA 1HI9A 2JA6C 5CHPA 1XZQA 4A3GK 2R7ZC 3HOUC 1XZPA 1FEUA 3K7AK 3HOXK 1Y1VC 5IP9K 1USOA 4DDQA 3T01A 5C3EC 1SFOC 1AB4A 1JOEA 1J6WA 4A3IK 2WB1L 1I50C 2NVYA 4WFAS 1J6XA 3AD7C 3N0BA 2JA7K 3GDZA 4A3BK 3PO2C 5EGHA 5M5YK 3BUEA 5M5WK 1ZVUA 2Y0SD 3AD8C 5D4DA 5HL7S 5IOSA 2R93A 1K83A 1EQRA 1YNJA 3RZDC 1I3QA 1DCOA 4JK1A 3S1NK 1WIHA 3T00A 3FOFA 4BXXC 1ZXOA 1WCMK 4WILA 2P5MA 4FZBA 2B63K 1TWFA 3WODA 4A3FC 3I4NC 3PO3K 3HOWC 1BS2A 1XZPB 2V6SA 2ZJPS 1DCHA 3GTMA 3GTKA 2YU9K 2E2HC 1XXBA 2E2IA 4A3CC 3GTGK 4BBSK 4KATA 2JA5K 3OEPA 3OPFA 2GAGC 1YCLA 3S1RK 3VA7A 3GTOA 2NVTK 3CAGA 1YNNA 2R92C 2V6TA 4A3GC 2NVXK 1VRQC 4KMAA 3CQZK 3HOXC 3S2DK 1O2FB 5IOTA 5IOQA 4YFXA 1V5VA 4KB2A 1I6HC 1B4BA 1VLOA 3GEIA 4KARA 3DLLS 3TTGA 1PJ5A 4G0UA 5FJ8K 2ZUEA 3FKIK 3HOYK 4A3DC 3GTJC 4Y7NK 2JA7C 5JVOA 3HOVC 3AH5A 5FLMC 3TFJA 4A3BC 4BBRK 4A93C 2WAQL 3A8KA 3M4OK 4XSXA 2JA6A 4XLNA 4C2MK 2CFAB 2R7ZA 3DXJA 2NVYK 1IL2A 2L3UA 4AH6A 1Y1VA 1O26A 3GTPC 1SFOA 4KN7A 4XCHA 1J98A 4Y52K 1B4AA 4GTEA 1EK8A 5C4JK 1SMYA 2GSOA 1WQHA 4KC6A 4LK0A 2R93K 1TWCC 2ZJQS 3H3VL 4C3JK 3PIOS 3G4CA 4WF9S 4WJ3M 3PO3C 1R9TC 3M3YK 3L4KA 4FM9A 2ZJRS 2PMZL 5C44C 2YU9C 2W7VA 4GTAA 3SZZA 5IP7K 4BY7C 1O2BA 4LLGA 4MEXA 3S15C 1XXCA 5E68A 5EGEA 4A3JK 4AYBL 3FOEA 5IYDK 2JA5C 1Y1WK 1KQ4A 2ZFZA 2A68A 3AD9C 2E2IK 3JSTA 2VUMK 5DM7S 3AQPA 3S16K 3H0GC 4MQ9A 5TMCA 2A69A 1IS1A 1JVIA 2L5NA 2NVQC 5C4XK 4O2DA 5M5XK 2JA8K 4YG2A 4LK1A 4OIPA 4RMFA 4A3EK 2NVXC 4XLPA 4WFNS 3CQZC 2E2HA 4QJVB 1WOOA 1YX2A 3GTOK 1VH2A 2P8TA 4KMDA 1XPPA 3S1MC 2FQOA 2PA8D
chains in the Genus database with same CATH topology
3GTLK 4QIWL 3S1RK 4C3HK 4C3IK 4A3MK 3GTMK 3GTQK 3GTKK 3FKIC 3S2HK 2R92K 3GTLC 2E2JK 3S17K 3S1RC 4A3MC 2NVTK 1TWAK 3GTQC 3HOZC 3I4MK 4KMUA 4OINA 2O5IA 1YNNA 3HKZD 2E2JC 2R92C 3S17C 4A3GC 5IYCK 2NVXK 2NVTC 4A3CK 2R93K 4BBRC 4XSZA 1I6HK 5IYCC 3S1QK 1IW7A 3CQZK 3HOXC 3RZOK 2PA8L 3S2DK 5M3FK 3S14K 4YFXA 4A3KC 4QJVA 2WAQD 3S1QC 4G7HA 3RZOC 3S2DC 1I6HC 4BY1K 1TWHK 4X6AK 1TWGC 4A3DK 3S14C 4NOIA 3GTJK 5IYBK 4MEYA 4X6AC 5FJ8K 4BY1C 4G7ZA 1HQMA 5M3MK 3FKIK 3HKZL 3HOYK 4A3DC 3GTJC 4Y7NK 4GZYA 4G7OA 4OIQA 5FLMK 5IYBC 2JA6K 4Q4ZA 3HOVK 2R7ZK 1BDFA 2JA7C 4A93K 3HOZK 3HOYC 5C4JC 4Y7NC 2JA6C 3HOVC 4A3GK 5FLMC 2WB1D 2R7ZC 4A3BC 4BBRK 4A93C 2WAQL 3HOUC 3M4OK 4YFNA 3K7AK 4XSXA 3HOXK 1Y1VC 4XLNA 5IP9K 4C2MK 5C3EK 4Q5SA 3DXJA 2NVYK 3M3YC 4A3KK 3H3VD 3M4OC 3GTPK 3K7AC 5C3EC 5IP9C 4C2MC 1SFOC 1TWGK 2NVYC 3GTPC 2BE5A 4KN7A 5IP7C 4A3IK 4A3JC 2WB1L 1I50C 5IYDC 4Y52K 2PMZD 2O5JA 1TWCK 3PO2K 2JA7K 1Y1WC 5C4JK 1SMYA 4A3IC 4Y52C 1ZYRA 4LK0A 1TWCC 4AYBD 3PO2C 1R9TK 3H3VL 4C3JK 3HOUK 4A3BK 5M5YK 3PO3C 4QIWD 1Y1VK 2VUMC 3S16C 2R93C 5M5WK 1R9TC 3EQLA 4C3JC 5C44K 3M3YK 2A6HA 1K83C 2Y0SD 4A3LC 5D4DA 1SFOK 4BY7K 2JA8C 1I3QC 3S15K 2PMZL 4LJZA 5C44C 2YU9C 2A6EA 1YNJA 3RZDC 4ZH4A 5IP7K 4BY7C 4BXXK 4LLGA 4MEXA 4KN4A 3S15C 1I50K 4A3JK 5IYDK 4AYBL 4JK1A 1I6VA 3S1NK 2JA5C 3GTOC 1Y1WK 1TWFC 4BXXC 4A3FK 3I4NK 3HOWK 1WCMK 4OIOA 2A68A 3S1NC 3H0GK 2PPBA 2Y0SL 2B63K 2E2IK 3WODA 4A3FC 3I4NC 4C3HC 4C3IC 3HOWC 3PO3K 2VUMK 1WCMC 3GTMC 2NVQK 3S16K 3H0GC 4MQ9A 3GTKC 5TMCA 4OIRA 2B63C 2A69A 3S2HC 2E2IC 1K83K 2E2HK 4A3LK 1TWAC 2NVQC 5C4XK 2JA8K 1I3QK 5M5XK 3I4MC 2YU9K 4YG2A 4LK1A 4OIPA 4YFKA 2E2HC 2NVXC 4A3EK 4A3CC 3RZDK 4XLPA 5C4XC 3GTGK 4BBSK 5TMFA 3S1MK 3CQZC 4A3EC 4QJVB 2JA5K 3GTOK 1TWFK 3GTGC 4BBSC 2CW0A 1XPPA 3S1MC 1TWHC 2PA8D
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3GTL K;  4QIW L;  3S1R K;  4C3H K;  4C3I K;  4A3M K;  3GTM K;  3GTQ K;  3GTK K;  3FKI C;  3S2H K;  2R92 K;  3GTL C;  2E2J K;  3S17 K;  3S1R C;  4A3M C;  2NVT K;  1TWA K;  3GTQ C;  3HOZ C;  3I4M K;  4KMU A;  4OIN A;  2O5I A;  1YNN A;  3HKZ D;  2E2J C;  2R92 C;  3S17 C;  4A3G C;  5IYC K;  2NVX K;  2NVT C;  4A3C K;  2R93 K;  4BBR C;  4XSZ A;  1I6H K;  5IYC C;  3S1Q K;  1IW7 A;  3CQZ K;  3HOX C;  3RZO K;  2PA8 L;  3S2D K;  5M3F K;  3S14 K;  4YFX A;  4A3K C;  4QJV A;  2WAQ D;  3S1Q C;  4G7H A;  3RZO C;  3S2D C;  1I6H C;  4BY1 K;  1TWH K;  4X6A K;  1TWG C;  4A3D K;  3S14 C;  4NOI A;  3GTJ K;  5IYB K;  4MEY A;  4X6A C;  5FJ8 K;  4BY1 C;  4G7Z A;  1HQM A;  5M3M K;  3FKI K;  3HKZ L;  3HOY K;  4A3D C;  3GTJ C;  4Y7N K;  4GZY A;  4G7O A;  4OIQ A;  5FLM K;  5IYB C;  2JA6 K;  4Q4Z A;  3HOV K;  2R7Z K;  1BDF A;  2JA7 C;  4A93 K;  3HOZ K;  3HOY C;  5C4J C;  4Y7N C;  2JA6 C;  3HOV C;  4A3G K;  5FLM C;  2WB1 D;  2R7Z C;  4A3B C;  4BBR K;  4A93 C;  2WAQ L;  3HOU C;  3M4O K;  4YFN A;  3K7A K;  4XSX A;  3HOX K;  1Y1V C;  4XLN A;  5IP9 K;  4C2M K;  5C3E K;  4Q5S A;  3DXJ A;  2NVY K;  3M3Y C;  4A3K K;  3H3V D;  3M4O C;  3GTP K;  3K7A C;  5C3E C;  5IP9 C;  4C2M C;  1SFO C;  1TWG K;  2NVY C;  3GTP C;  2BE5 A;  4KN7 A;  5IP7 C;  4A3I K;  4A3J C;  2WB1 L;  1I50 C;  5IYD C;  4Y52 K;  2PMZ D;  2O5J A;  1TWC K;  3PO2 K;  2JA7 K;  1Y1W C;  5C4J K;  1SMY A;  4A3I C;  4Y52 C;  1ZYR A;  4LK0 A;  1TWC C;  4AYB D;  3PO2 C;  1R9T K;  3H3V L;  4C3J K;  3HOU K;  4A3B K;  5M5Y K;  3PO3 C;  4QIW D;  1Y1V K;  2VUM C;  3S16 C;  2R93 C;  5M5W K;  1R9T C;  3EQL A;  4C3J C;  5C44 K;  3M3Y K;  2A6H A;  1K83 C;  2Y0S D;  4A3L C;  5D4D A;  1SFO K;  4BY7 K;  2JA8 C;  1I3Q C;  3S15 K;  2PMZ L;  4LJZ A;  5C44 C;  2YU9 C;  2A6E A;  1YNJ A;  3RZD C;  4ZH4 A;  5IP7 K;  4BY7 C;  4BXX K;  4LLG A;  4MEX A;  4KN4 A;  3S15 C;  1I50 K;  4A3J K;  5IYD K;  4AYB L;  4JK1 A;  1I6V A;  3S1N K;  2JA5 C;  3GTO C;  1Y1W K;  1TWF C;  4BXX C;  4A3F K;  3I4N K;  3HOW K;  1WCM K;  4OIO A;  2A68 A;  3S1N C;  3H0G K;  2PPB A;  2Y0S L;  2B63 K;  2E2I K;  3WOD A;  4A3F C;  3I4N C;  4C3H C;  4C3I C;  3HOW C;  3PO3 K;  2VUM K;  1WCM C;  3GTM C;  2NVQ K;  3S16 K;  3H0G C;  4MQ9 A;  3GTK C;  5TMC A;  4OIR A;  2B63 C;  2A69 A;  3S2H C;  2E2I C;  1K83 K;  2E2H K;  4A3L K;  1TWA C;  2NVQ C;  5C4X K;  2JA8 K;  1I3Q K;  5M5X K;  3I4M C;  2YU9 K;  4YG2 A;  4LK1 A;  4OIP A;  4YFK A;  2E2H C;  2NVX C;  4A3E K;  4A3C C;  3RZD K;  4XLP A;  5C4X C;  3GTG K;  4BBS K;  5TMF A;  3S1M K;  3CQZ C;  4A3E C;  4QJV B;  2JA5 K;  3GTO K;  1TWF K;  3GTG C;  4BBS C;  2CW0 A;  1XPP A;  3S1M C;  1TWH C;  2PA8 D; 
#chains in the Genus database with same CATH topology
 4C3H K;  3L4J A;  1WQF A;  3PIP S;  4P9S A;  3FKI C;  2KWA A;  3GTL C;  2E2J K;  3S17 K;  4A3M C;  1VJE A;  1TWA K;  1XZQ B;  3GIR A;  4BLB A;  3GTQ C;  3I4M K;  4KMU A;  2O5I A;  5IYC K;  3HKZ D;  1EFW A;  3G4A A;  4BBR C;  3LAJ A;  3S1Q K;  2R92 A;  2KQ1 A;  4KM9 A;  4GTB A;  3S14 K;  4KM8 A;  4X6A K;  4BY1 K;  4G7H A;  3RZO C;  4GTD A;  1TWH K;  1G51 A;  4KAS A;  5IYB K;  2XCQ A;  1HQM A;  1IQ0 A;  1X31 C;  3N0C A;  2JA6 K;  4C45 A;  2R7Z K;  3LYW A;  4M1X A;  3HOZ K;  5C4J C;  3N3Y A;  3GTJ A;  2WB1 D;  3AQO A;  2JA7 A;  4IOC S;  5C3E K;  4Q5S A;  2RGR A;  1IE0 A;  3M3Y C;  4A3K K;  1UV7 A;  3K7A C;  5IP9 C;  4GTC A;  1TWG K;  4U67 S;  2XCR B;  2GSU A;  1O25 A;  4G0V A;  3GEH A;  2BE5 A;  5IP7 C;  5DM6 S;  4A3J C;  5IYD C;  4GFQ A;  3GTP A;  2O5J A;  3PO2 K;  1Y1W C;  4A3I C;  1F9N A;  4BKW A;  1XXA A;  4GTL A;  3ERE D;  2VUM C;  3IPJ A;  3S16 C;  1TWC A;  3EQL A;  1WOP A;  2ZUF A;  2JA8 C;  1R9T A;  3A8J A;  4ZH4 A;  4BXX K;  2YU9 A;  1I6V A;  3LAP A;  3GTO C;  1PJ6 A;  4WCE S;  1PJ7 A;  4A3F K;  3I4N K;  3HOW K;  1O27 A;  4OIO A;  3S1N C;  2PPB A;  2Y0S L;  4P5B A;  1ISE A;  4C3H C;  1I50 A;  1WCM C;  2JH3 A;  2B63 C;  2E2H K;  1K83 K;  3ORE A;  4A3L K;  1TWA C;  5HL8 A;  3H0G A;  1I3Q K;  1F7V A;  3I4M C;  3LPX A;  1INN A;  1ZQ1 C;  5TMF A;  2NVX A;  4KDD A;  1TWF K;  1F93 A;  5JVH S;  3GTG C;  4BBS C;  3V4G A;  2CW0 A;  1WOS A;  3CQZ A;  4IOA S;  1TWH C;  4QIW L;  3BP8 C;  1F7U A;  4C3I K;  1WOR A;  3GTM K;  3GTK K;  4G0W A;  3S2H K;  2R92 K;  3GEE A;  3S1R C;  1O24 A;  1ZBS A;  3HOZ C;  3FKI A;  3GTL A;  1RU0 A;  2NVT C;  3HXA A;  4LOW A;  3GTQ A;  4XSZ A;  1I6H K;  4IO9 S;  1IW7 A;  2KXY A;  5M3F K;  2FQT A;  1VGX A;  4PAA A;  4A3K C;  2WAQ D;  3S2D C;  1TWG C;  4A3D K;  3GTJ K;  4KMH A;  3TFH A;  4G7Z A;  3BP3 A;  5JVG S;  1WQG A;  3A8I A;  4BLA A;  4PAB A;  3HOV K;  5FLM K;  1L0W A;  1BDF A;  4A93 K;  3HOY C;  2D6F C;  3NUH A;  4Y7N C;  1DD5 A;  4YFN A;  3GTP K;  3H3V D;  3M4O C;  2PHC B;  3TFI A;  4C2M C;  1IBA A;  5HQH A;  2NVY C;  1O2A A;  3QX3 A;  4LQY A;  2PMZ D;  1TWC K;  1BGW A;  3T02 A;  3SZY A;  4Y52 C;  1ZYR A;  4AYB D;  1R9T K;  3HOU K;  1Y1W A;  1Y1V K;  4QIW D;  2Y3P A;  2R93 C;  4C3J C;  1O29 A;  5C44 K;  2A6H A;  1K83 C;  2EBB A;  2CFA A;  4A3L C;  1SFO K;  2VUM A;  4BY7 K;  3S15 K;  1I3Q C;  4LJZ A;  2A6E A;  2V6U A;  1EI6 A;  4KN4 A;  1I50 K;  1JQW A;  5IOR A;  1J6V A;  1TWF C;  5TJ3 A;  2GSN A;  3H0G K;  4KB4 A;  1O28 A;  4WJ4 A;  4C3I C;  4WFB S;  5L46 A;  2NVQ K;  3GTM C;  1WSV A;  3GTK C;  3CF5 S;  3S2H C;  4OIR A;  2E2I C;  3ADA C;  1WCM A;  5JFE A;  2B63 A;  4YFK A;  3RZD K;  1TWA A;  4ILD A;  5C4X C;  3S1M K;  4A3E C;  3FHZ A;  3Q3Q A;  1USM A;  4GT9 A;  3GTL K;  3GSI A;  3GTG A;  2RH6 A;  4A3M K;  3GTQ K;  1TWH A;  2JA5 A;  1EH1 A;  4LR2 A;  4OIN A;  1BJT A;  2E2J C;  3S17 C;  1GE9 A;  4A3C K;  5IYC C;  3RZO K;  2PA8 L;  4J3N A;  3S0X A;  2XCO A;  4QJV A;  3S1Q C;  1WSR A;  4GTF A;  5CJ9 A;  3MML B;  3S14 C;  4NOI A;  2KPU A;  4MEY A;  4X6A C;  2GAH C;  4BY1 C;  4KAW X;  4P5A A;  5M3M K;  1C0A A;  3HKZ L;  1TWG A;  4GZY A;  4G7O A;  4OIQ A;  1DCP A;  5IYB C;  4Q4Z A;  1HI9 A;  2JA6 C;  5CHP A;  1XZQ A;  4A3G K;  2R7Z C;  3HOU C;  1XZP A;  1FEU A;  3K7A K;  3HOX K;  1Y1V C;  5IP9 K;  1USO A;  4DDQ A;  3T01 A;  5C3E C;  1SFO C;  1AB4 A;  1JOE A;  1J6W A;  4A3I K;  2WB1 L;  1I50 C;  2NVY A;  4WFA S;  1J6X A;  3AD7 C;  3N0B A;  2JA7 K;  3GDZ A;  4A3B K;  3PO2 C;  5EGH A;  5M5Y K;  3BUE A;  5M5W K;  1ZVU A;  2Y0S D;  3AD8 C;  5D4D A;  5HL7 S;  5IOS A;  2R93 A;  1K83 A;  1EQR A;  1YNJ A;  3RZD C;  1I3Q A;  1DCO A;  4JK1 A;  3S1N K;  1WIH A;  3T00 A;  3FOF A;  4BXX C;  1ZXO A;  1WCM K;  4WIL A;  2P5M A;  4FZB A;  2B63 K;  1TWF A;  3WOD A;  4A3F C;  3I4N C;  3PO3 K;  3HOW C;  1BS2 A;  1XZP B;  2V6S A;  2ZJP S;  1DCH A;  3GTM A;  3GTK A;  2YU9 K;  2E2H C;  1XXB A;  2E2I A;  4A3C C;  3GTG K;  4BBS K;  4KAT A;  2JA5 K;  3OEP A;  3OPF A;  2GAG C;  1YCL A;  3S1R K;  3VA7 A;  3GTO A;  2NVT K;  3CAG A;  1YNN A;  2R92 C;  2V6T A;  4A3G C;  2NVX K;  1VRQ C;  4KMA A;  3CQZ K;  3HOX C;  3S2D K;  1O2F B;  5IOT A;  5IOQ A;  4YFX A;  1V5V A;  4KB2 A;  1I6H C;  1B4B A;  1VLO A;  3GEI A;  4KAR A;  3DLL S;  3TTG A;  1PJ5 A;  4G0U A;  5FJ8 K;  2ZUE A;  3FKI K;  3HOY K;  4A3D C;  3GTJ C;  4Y7N K;  2JA7 C;  5JVO A;  3HOV C;  3AH5 A;  5FLM C;  3TFJ A;  4A3B C;  4BBR K;  4A93 C;  2WAQ L;  3A8K A;  3M4O K;  4XSX A;  2JA6 A;  4XLN A;  4C2M K;  2CFA B;  2R7Z A;  3DXJ A;  2NVY K;  1IL2 A;  2L3U A;  4AH6 A;  1Y1V A;  1O26 A;  3GTP C;  1SFO A;  4KN7 A;  4XCH A;  1J98 A;  4Y52 K;  1B4A A;  4GTE A;  1EK8 A;  5C4J K;  1SMY A;  2GSO A;  1WQH A;  4KC6 A;  4LK0 A;  2R93 K;  1TWC C;  2ZJQ S;  3H3V L;  4C3J K;  3PIO S;  3G4C A;  4WF9 S;  4WJ3 M;  3PO3 C;  1R9T C;  3M3Y K;  3L4K A;  4FM9 A;  2ZJR S;  2PMZ L;  5C44 C;  2YU9 C;  2W7V A;  4GTA A;  3SZZ A;  5IP7 K;  4BY7 C;  1O2B A;  4LLG A;  4MEX A;  3S15 C;  1XXC A;  5E68 A;  5EGE A;  4A3J K;  4AYB L;  3FOE A;  5IYD K;  2JA5 C;  1Y1W K;  1KQ4 A;  2ZFZ A;  2A68 A;  3AD9 C;  2E2I K;  3JST A;  2VUM K;  5DM7 S;  3AQP A;  3S16 K;  3H0G C;  4MQ9 A;  5TMC A;  2A69 A;  1IS1 A;  1JVI A;  2L5N A;  2NVQ C;  5C4X K;  4O2D A;  5M5X K;  2JA8 K;  4YG2 A;  4LK1 A;  4OIP A;  4RMF A;  4A3E K;  2NVX C;  4XLP A;  4WFN S;  3CQZ C;  2E2H A;  4QJV B;  1WOO A;  1YX2 A;  3GTO K;  1VH2 A;  2P8T A;  4KMD A;  1XPP A;  3S1M C;  2FQO A;  2PA8 D; 
#chains in the Genus database with same CATH homology
 3GTL K;  4QIW L;  3S1R K;  4C3H K;  4C3I K;  4A3M K;  3GTM K;  3GTQ K;  3GTK K;  3FKI C;  3S2H K;  2R92 K;  3GTL C;  2E2J K;  3S17 K;  3S1R C;  4A3M C;  2NVT K;  1TWA K;  3GTQ C;  3HOZ C;  3I4M K;  4KMU A;  4OIN A;  2O5I A;  1YNN A;  3HKZ D;  2E2J C;  2R92 C;  3S17 C;  4A3G C;  5IYC K;  2NVX K;  2NVT C;  4A3C K;  2R93 K;  4BBR C;  4XSZ A;  1I6H K;  5IYC C;  3S1Q K;  1IW7 A;  3CQZ K;  3HOX C;  3RZO K;  2PA8 L;  3S2D K;  5M3F K;  3S14 K;  4YFX A;  4A3K C;  4QJV A;  2WAQ D;  3S1Q C;  4G7H A;  3RZO C;  3S2D C;  1I6H C;  4BY1 K;  1TWH K;  4X6A K;  1TWG C;  4A3D K;  3S14 C;  4NOI A;  3GTJ K;  5IYB K;  4MEY A;  4X6A C;  5FJ8 K;  4BY1 C;  4G7Z A;  1HQM A;  5M3M K;  3FKI K;  3HKZ L;  3HOY K;  4A3D C;  3GTJ C;  4Y7N K;  4GZY A;  4G7O A;  4OIQ A;  5FLM K;  5IYB C;  2JA6 K;  4Q4Z A;  3HOV K;  2R7Z K;  1BDF A;  2JA7 C;  4A93 K;  3HOZ K;  3HOY C;  5C4J C;  4Y7N C;  2JA6 C;  3HOV C;  4A3G K;  5FLM C;  2WB1 D;  2R7Z C;  4A3B C;  4BBR K;  4A93 C;  2WAQ L;  3HOU C;  3M4O K;  4YFN A;  3K7A K;  4XSX A;  3HOX K;  1Y1V C;  4XLN A;  5IP9 K;  4C2M K;  5C3E K;  4Q5S A;  3DXJ A;  2NVY K;  3M3Y C;  4A3K K;  3H3V D;  3M4O C;  3GTP K;  3K7A C;  5C3E C;  5IP9 C;  4C2M C;  1SFO C;  1TWG K;  2NVY C;  3GTP C;  2BE5 A;  4KN7 A;  5IP7 C;  4A3I K;  4A3J C;  2WB1 L;  1I50 C;  5IYD C;  4Y52 K;  2PMZ D;  2O5J A;  1TWC K;  3PO2 K;  2JA7 K;  1Y1W C;  5C4J K;  1SMY A;  4A3I C;  4Y52 C;  1ZYR A;  4LK0 A;  1TWC C;  4AYB D;  3PO2 C;  1R9T K;  3H3V L;  4C3J K;  3HOU K;  4A3B K;  5M5Y K;  3PO3 C;  4QIW D;  1Y1V K;  2VUM C;  3S16 C;  2R93 C;  5M5W K;  1R9T C;  3EQL A;  4C3J C;  5C44 K;  3M3Y K;  2A6H A;  1K83 C;  2Y0S D;  4A3L C;  5D4D A;  1SFO K;  4BY7 K;  2JA8 C;  1I3Q C;  3S15 K;  2PMZ L;  4LJZ A;  5C44 C;  2YU9 C;  2A6E A;  1YNJ A;  3RZD C;  4ZH4 A;  5IP7 K;  4BY7 C;  4BXX K;  4LLG A;  4MEX A;  4KN4 A;  3S15 C;  1I50 K;  4A3J K;  5IYD K;  4AYB L;  4JK1 A;  1I6V A;  3S1N K;  2JA5 C;  3GTO C;  1Y1W K;  1TWF C;  4BXX C;  4A3F K;  3I4N K;  3HOW K;  1WCM K;  4OIO A;  2A68 A;  3S1N C;  3H0G K;  2PPB A;  2Y0S L;  2B63 K;  2E2I K;  3WOD A;  4A3F C;  3I4N C;  4C3H C;  4C3I C;  3HOW C;  3PO3 K;  2VUM K;  1WCM C;  3GTM C;  2NVQ K;  3S16 K;  3H0G C;  4MQ9 A;  3GTK C;  5TMC A;  4OIR A;  2B63 C;  2A69 A;  3S2H C;  2E2I C;  1K83 K;  2E2H K;  4A3L K;  1TWA C;  2NVQ C;  5C4X K;  2JA8 K;  1I3Q K;  5M5X K;  3I4M C;  2YU9 K;  4YG2 A;  4LK1 A;  4OIP A;  4YFK A;  2E2H C;  2NVX C;  4A3E K;  4A3C C;  3RZD K;  4XLP A;  5C4X C;  3GTG K;  4BBS K;  5TMF A;  3S1M K;  3CQZ C;  4A3E C;  4QJV B;  2JA5 K;  3GTO K;  1TWF K;  3GTG C;  4BBS C;  2CW0 A;  1XPP A;  3S1M C;  1TWH C;  2PA8 D; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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