3JSTA

Crystal structure of transcriptional coactivator/pterin dehydratase from brucella melitensis
Total Genus 29
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
29
sequence length
97
structure length
97
Chain Sequence
MARNRLTESEMNEALRALDGWQKVDGREAITRSFKFKDFSTAFGFMAQAALYAEKLDHHPEWFNAYNRVDVTLATHSENGVTELDIKMARKMNAIAG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Putative pterin-4-alpha-carbinolamine dehydratase
publication title Crystal structure of transcriptional coactivator/pterin dehydratase from Brucella Melitensis
rcsb
source organism Brucella melitensis
molecule tags Lyase
total genus 29
structure length 97
sequence length 97
chains with identical sequence B
ec nomenclature ec 4.2.1.96: 4a-hydroxytetrahydrobiopterin dehydratase.
pdb deposition date 2009-09-10

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01329 Pterin_4a Pterin 4 alpha carbinolamine dehydratase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.1360.20 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 Transcriptional coactivator/pterin dehydratase 3jstA00
2EBBA 3JSTA 1DCHA 1USMA 2V6SA 3HXAA 1DCOA 1F93A 1USOA 4LOWA 4WILA 4C45A 1DCPA 2V6UA 2V6TA 1RU0A
chains in the Genus database with same CATH superfamily
3S14K 1TWGK 4LR2A 4G7ZA 3I4NK 4A3FK 3CQZA 3QX3A 4KC6A 2EBBA 5C44K 5JVOA 3H3VL 2GSNA 2XCRB 3HOYK 3M4OK 2WAQL 3PO3C 4FM9A 4X6AC 4A3DK 3CAGA 3T01A 5IP9K 3AD7C 3GTGK 4KATA 1O29A 2GAGC 3TFJA 1R9TK 2JA6K 4A3IK 3H0GK 4JK1A 3GTJA 1I50A 1TWCK 1EI6A 5EGHA 4A3KK 2E2IC 3L4KA 3K7AC 3GTKK 2PA8D 1JOEA 4QJVB 5IYDC 1GE9A 4DDQA 4G0WA 4A3JC 1G51A 1TWAA 4OIRA 3S1RC 5IP7C 3GIRA 1TWGA 4ZH4A 5M3MK 1BDFA 2WB1L 3S16K 1HQMA 3GTPC 2NVTK 1WCMC 3S1QC 5JFEA 2R93C 2NVXA 2JA5C 1PJ6A 1Y1WA 1I3QA 3JSTA 3HOXK 1WOOA 3GTOK 1V5VA 1TWHC 3TFHA 4C3HC 1KQ4A 4C45A 4C3JK 2GSUA 3AQOA 4GTBA 3S2DK 5M5XK 4GTLA 2E2HA 4Y52K 4KARA 4ILDA 1VJEA 4OIOA 4LK0A 2JA6A 3PO2K 3HOZC 4G0VA 1USOA 1XXCA 1TWHK 2JA8C 1Y1VC 4C2MC 2R92K 2R7ZC 3S15C 1DCHA 1UV7A 1F7UA 3S1MK 3GTKA 4G7OA 3FKIK 4A3BC 4A3LK 3EQLA 1XXAA 4OIPA 4C2MK 4AYBL 1O25A 4FZBA 4QJVA 4A3CC 3AQPA 1WIHA 5C3EK 3HXAA 1SFOC 3GTMA 2A6HA 1F7VA 4KMUA 3GTQA 3GTLA 3L4JA 1B4BA 1IS1A 1JVIA 4A3MC 4KASA 5FLMK 3GTJC 2NVYA 1SFOK 1I50C 1I6HK 3WODA 2NVQK 3HOUC 3RZDC 2PMZD 5L46A 4KMAA 4KM9A 2PPBA 1EH1A 2E2JC 3S0XA 2JA7K 2WB1D 4MQ9A 2P5MA 1ZBSA 4AH6A 4KAWX 2FQOA 1EFWA 3LAJA 1TWAC 3AD8C 4BY1K 3M3YK 4C3IC 2VUMK 3S17K 4BY7C 4BXXK 3G4AA 1YCLA 3S2HC 2B63K 5IOSA 5IYCC 1K83A 1IQ0A 1WSVA 2NVXC 3HOVC 1Y1WC 1I3QC 1I6VA 4OIQA 4Y7NC 3LAPA 3S2HK 2KWAA 3ERED 3PO3K 5IYCK 1RU0A 1TWFA 1DD5A 1X31C 2E2HC 2YU9A 4X6AK 3HKZL 4GTCA 1XZQB 1VLOA 2Y0SL 4P5AA 2A69A 4M1XA 4GTDA 2JA7A 3GEEA 2E2IK 3FOFA 3K7AK 3OEPA 4WJ3M 2GSOA 5IYDK 3I4MC 4G7HA 1O27A 1WQGA 4NOIA 3SZYA 4A3JK 3S1RK 5IP7K 4KN7A 5D4DA 3GTQC 3GTPK 3GTLC 1WCMK 5CHPA 1BS2A 3S1QK 2R93K 3GTGA 2JA5K 2NVYC 2O5JA 1WOSA 1R9TA 4A93C 3A8IA 3H0GA 4KDDA 4C3HK 1TWCA 3H3VD 4BBSC 1IW7A 1WQHA 5IOQA 5IOTA 1J6XA 4KN4A 2WAQD 4KMHA 4OINA 1VGXA 4YFKA 1F9NA 3A8KA 4A3EC 3TTGA 1PJ7A 4A3GC 3CQZC 3HOZK 4GTEA 4XLNA 2JA8K 1Y1VK 2R7ZK 1XZQA 1O2FB 3S15K 2E2IA 5IYBC 3Q3QA 3BP3A 2ZUFA 1K83C 1YNNA 4A3BK 2XCOA 4BBRC 3ADAC 5E68A 3IPJA 4Q4ZA 1XZPB 5HL8A 2Y0SD 4MEYA 5C4XC 4YFNA 4A3CK 3GTOA 2PA8L 3GTPA 1TWFC 1WCMA 4BBRK 5CJ9A 2YU9C 1J6VA 5TMCA 3FOEA 2JA5A 2GAHC 3GEIA 4A3MK 3HOWC 1TWHA 4Q5SA 4J3NA 2R92A 4KB2A 3GTJK 1BGWA 1I50K 4QIWL 4P9SA 3HOUK 3RZDK 2CFAB 4PAAA 2A6EA 3N0CA 3AH5A 1TWGC 5M5YK 2E2JK 3S14C 5TMFA 3FKIA 1WQFA 3I4NC 4A3FC 1O2BA 2D6FC 1JQWA 1Y1VA 5C44C 4PABA 1ZXOA 1USMA 1VH2A 3HOYC 1TWAK 4XSXA 4C3IK 3M4OC 4GZYA 5M5WK 4BY7K 4RMFA 2RH6A 2Y3PA 1L0WA 4GTFA 3AD9C 3TFIA 4A3DC 1EQRA 1F93A 5IP9C 3BUEA 3FHZA 2NVXK 3GTGC 3HOVK 3GEHA 2RGRA 1R9TC 1Y1WK 4A3IC 1I3QK 2JA6C 3H0GC 1SFOA 1TWCC 4Y7NK 1XZPA 1IBAA 1ISEA 4AYBD 3OPFA 4A3KC 1AB4A 3VA7A 3GTKC 3N0BA 3BP8C 2ZUEA 1DCPA 3GDZA 2E2HK 2V6UA 1BJTA 2XCQA 1J6WA 3NUHA 3SZZA 4XCHA 3N3YA 2JH3A 5C4JC 3RZOC 3S1NC 1O24A 2VUMA 5M3FK 4XSZA 3S16C 2NVTC 2B63A 3G4CA 1EK8A 3V4GA 3GTMC 2CFAA 1C0AA 3T02A 5C4JK 4BKWA 3RZOK 3S1NK 3I4MK 2PMZL 1SMYA 3HOXC 4LLGA 3GTOC 4QIWD 4XLPA 3T00A 4KB4A 4C3JC 4GFQA 4LOWA 3GTMK 3S2DC 3GTQK 4Y52C 2V6SA 1DCOA 3GTLK 1IL2A 3OREA 2P8TA 4KM8A 3PO2C 2R92C 2NVYK 3DXJA 4GTAA 4A93K 3S1MC 4P5BA 4YFXA 4BBSK 3A8JA 4LQYA 1WSRA 3FKIC 4G0UA 3GSIA 4A3LC 1O26A 4MEXA 1ZQ1C 1HI9A 1PJ5A 4BLAA 4A3EK 3LPXA 4A3GK 3CQZK 2A68A 3HKZD 4WILA 1IE0A 4O2DA 5C3EC 5IORA 5TJ3A 5IYBK 2FQTA 4BLBA 1VRQC 4YG2A 1O2AA 2V6TA 1WOPA 1K83K 4LJZA 2R93A 1ZYRA 1XXBA 5FLMC 2ZFZA 5EGEA 5C4XK 2CW0A 1I6HC 2NVQC 1INNA 1TWFK 2JA7C 1B4AA 2O5IA 4WJ4A 2YU9K 4LK1A 2PHCB 1J98A 3MMLB 1ZVUA 4GT9A 2W7VA 1WORA 1YNJA 1YX2A 3HOWK 4BY1C 3M3YC 2VUMC 3S17C 2R7ZA 5FJ8K 4BXXC 2BE5A 4KMDA 1O28A 2B63C 1XPPA
chains in the Genus database with same CATH topology
2EBBA 3JSTA 1DCHA 1USMA 2V6SA 3HXAA 1DCOA 1F93A 1USOA 4LOWA 4WILA 4C45A 1DCPA 2V6UA 2V6TA 1RU0A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2EBB A;  3JST A;  1DCH A;  1USM A;  2V6S A;  3HXA A;  1DCO A;  1F93 A;  1USO A;  4LOW A;  4WIL A;  4C45 A;  1DCP A;  2V6U A;  2V6T A;  1RU0 A; 
#chains in the Genus database with same CATH topology
 3S14 K;  1TWG K;  4LR2 A;  4G7Z A;  3I4N K;  4A3F K;  3CQZ A;  3QX3 A;  4KC6 A;  2EBB A;  5C44 K;  5JVO A;  3H3V L;  2GSN A;  2XCR B;  3HOY K;  3M4O K;  2WAQ L;  3PO3 C;  4FM9 A;  4X6A C;  4A3D K;  3CAG A;  3T01 A;  5IP9 K;  3AD7 C;  3GTG K;  4KAT A;  1O29 A;  2GAG C;  3TFJ A;  1R9T K;  2JA6 K;  4A3I K;  3H0G K;  4JK1 A;  3GTJ A;  1I50 A;  1TWC K;  1EI6 A;  5EGH A;  4A3K K;  2E2I C;  3L4K A;  3K7A C;  3GTK K;  2PA8 D;  1JOE A;  4QJV B;  5IYD C;  1GE9 A;  4DDQ A;  4G0W A;  4A3J C;  1G51 A;  1TWA A;  4OIR A;  3S1R C;  5IP7 C;  3GIR A;  1TWG A;  4ZH4 A;  5M3M K;  1BDF A;  2WB1 L;  3S16 K;  1HQM A;  3GTP C;  2NVT K;  1WCM C;  3S1Q C;  5JFE A;  2R93 C;  2NVX A;  2JA5 C;  1PJ6 A;  1Y1W A;  1I3Q A;  3JST A;  3HOX K;  1WOO A;  3GTO K;  1V5V A;  1TWH C;  3TFH A;  4C3H C;  1KQ4 A;  4C45 A;  4C3J K;  2GSU A;  3AQO A;  4GTB A;  3S2D K;  5M5X K;  4GTL A;  2E2H A;  4Y52 K;  4KAR A;  4ILD A;  1VJE A;  4OIO A;  4LK0 A;  2JA6 A;  3PO2 K;  3HOZ C;  4G0V A;  1USO A;  1XXC A;  1TWH K;  2JA8 C;  1Y1V C;  4C2M C;  2R92 K;  2R7Z C;  3S15 C;  1DCH A;  1UV7 A;  1F7U A;  3S1M K;  3GTK A;  4G7O A;  3FKI K;  4A3B C;  4A3L K;  3EQL A;  1XXA A;  4OIP A;  4C2M K;  4AYB L;  1O25 A;  4FZB A;  4QJV A;  4A3C C;  3AQP A;  1WIH A;  5C3E K;  3HXA A;  1SFO C;  3GTM A;  2A6H A;  1F7V A;  4KMU A;  3GTQ A;  3GTL A;  3L4J A;  1B4B A;  1IS1 A;  1JVI A;  4A3M C;  4KAS A;  5FLM K;  3GTJ C;  2NVY A;  1SFO K;  1I50 C;  1I6H K;  3WOD A;  2NVQ K;  3HOU C;  3RZD C;  2PMZ D;  5L46 A;  4KMA A;  4KM9 A;  2PPB A;  1EH1 A;  2E2J C;  3S0X A;  2JA7 K;  2WB1 D;  4MQ9 A;  2P5M A;  1ZBS A;  4AH6 A;  4KAW X;  2FQO A;  1EFW A;  3LAJ A;  1TWA C;  3AD8 C;  4BY1 K;  3M3Y K;  4C3I C;  2VUM K;  3S17 K;  4BY7 C;  4BXX K;  3G4A A;  1YCL A;  3S2H C;  2B63 K;  5IOS A;  5IYC C;  1K83 A;  1IQ0 A;  1WSV A;  2NVX C;  3HOV C;  1Y1W C;  1I3Q C;  1I6V A;  4OIQ A;  4Y7N C;  3LAP A;  3S2H K;  2KWA A;  3ERE D;  3PO3 K;  5IYC K;  1RU0 A;  1TWF A;  1DD5 A;  1X31 C;  2E2H C;  2YU9 A;  4X6A K;  3HKZ L;  4GTC A;  1XZQ B;  1VLO A;  2Y0S L;  4P5A A;  2A69 A;  4M1X A;  4GTD A;  2JA7 A;  3GEE A;  2E2I K;  3FOF A;  3K7A K;  3OEP A;  4WJ3 M;  2GSO A;  5IYD K;  3I4M C;  4G7H A;  1O27 A;  1WQG A;  4NOI A;  3SZY A;  4A3J K;  3S1R K;  5IP7 K;  4KN7 A;  5D4D A;  3GTQ C;  3GTP K;  3GTL C;  1WCM K;  5CHP A;  1BS2 A;  3S1Q K;  2R93 K;  3GTG A;  2JA5 K;  2NVY C;  2O5J A;  1WOS A;  1R9T A;  4A93 C;  3A8I A;  3H0G A;  4KDD A;  4C3H K;  1TWC A;  3H3V D;  4BBS C;  1IW7 A;  1WQH A;  5IOQ A;  5IOT A;  1J6X A;  4KN4 A;  2WAQ D;  4KMH A;  4OIN A;  1VGX A;  4YFK A;  1F9N A;  3A8K A;  4A3E C;  3TTG A;  1PJ7 A;  4A3G C;  3CQZ C;  3HOZ K;  4GTE A;  4XLN A;  2JA8 K;  1Y1V K;  2R7Z K;  1XZQ A;  1O2F B;  3S15 K;  2E2I A;  5IYB C;  3Q3Q A;  3BP3 A;  2ZUF A;  1K83 C;  1YNN A;  4A3B K;  2XCO A;  4BBR C;  3ADA C;  5E68 A;  3IPJ A;  4Q4Z A;  1XZP B;  5HL8 A;  2Y0S D;  4MEY A;  5C4X C;  4YFN A;  4A3C K;  3GTO A;  2PA8 L;  3GTP A;  1TWF C;  1WCM A;  4BBR K;  5CJ9 A;  2YU9 C;  1J6V A;  5TMC A;  3FOE A;  2JA5 A;  2GAH C;  3GEI A;  4A3M K;  3HOW C;  1TWH A;  4Q5S A;  4J3N A;  2R92 A;  4KB2 A;  3GTJ K;  1BGW A;  1I50 K;  4QIW L;  4P9S A;  3HOU K;  3RZD K;  2CFA B;  4PAA A;  2A6E A;  3N0C A;  3AH5 A;  1TWG C;  5M5Y K;  2E2J K;  3S14 C;  5TMF A;  3FKI A;  1WQF A;  3I4N C;  4A3F C;  1O2B A;  2D6F C;  1JQW A;  1Y1V A;  5C44 C;  4PAB A;  1ZXO A;  1USM A;  1VH2 A;  3HOY C;  1TWA K;  4XSX A;  4C3I K;  3M4O C;  4GZY A;  5M5W K;  4BY7 K;  4RMF A;  2RH6 A;  2Y3P A;  1L0W A;  4GTF A;  3AD9 C;  3TFI A;  4A3D C;  1EQR A;  1F93 A;  5IP9 C;  3BUE A;  3FHZ A;  2NVX K;  3GTG C;  3HOV K;  3GEH A;  2RGR A;  1R9T C;  1Y1W K;  4A3I C;  1I3Q K;  2JA6 C;  3H0G C;  1SFO A;  1TWC C;  4Y7N K;  1XZP A;  1IBA A;  1ISE A;  4AYB D;  3OPF A;  4A3K C;  1AB4 A;  3VA7 A;  3GTK C;  3N0B A;  3BP8 C;  2ZUE A;  1DCP A;  3GDZ A;  2E2H K;  2V6U A;  1BJT A;  2XCQ A;  1J6W A;  3NUH A;  3SZZ A;  4XCH A;  3N3Y A;  2JH3 A;  5C4J C;  3RZO C;  3S1N C;  1O24 A;  2VUM A;  5M3F K;  4XSZ A;  3S16 C;  2NVT C;  2B63 A;  3G4C A;  1EK8 A;  3V4G A;  3GTM C;  2CFA A;  1C0A A;  3T02 A;  5C4J K;  4BKW A;  3RZO K;  3S1N K;  3I4M K;  2PMZ L;  1SMY A;  3HOX C;  4LLG A;  3GTO C;  4QIW D;  4XLP A;  3T00 A;  4KB4 A;  4C3J C;  4GFQ A;  4LOW A;  3GTM K;  3S2D C;  3GTQ K;  4Y52 C;  2V6S A;  1DCO A;  3GTL K;  1IL2 A;  3ORE A;  2P8T A;  4KM8 A;  3PO2 C;  2R92 C;  2NVY K;  3DXJ A;  4GTA A;  4A93 K;  3S1M C;  4P5B A;  4YFX A;  4BBS K;  3A8J A;  4LQY A;  1WSR A;  3FKI C;  4G0U A;  3GSI A;  4A3L C;  1O26 A;  4MEX A;  1ZQ1 C;  1HI9 A;  1PJ5 A;  4BLA A;  4A3E K;  3LPX A;  4A3G K;  3CQZ K;  2A68 A;  3HKZ D;  4WIL A;  1IE0 A;  4O2D A;  5C3E C;  5IOR A;  5TJ3 A;  5IYB K;  2FQT A;  4BLB A;  1VRQ C;  4YG2 A;  1O2A A;  2V6T A;  1WOP A;  1K83 K;  4LJZ A;  2R93 A;  1ZYR A;  1XXB A;  5FLM C;  2ZFZ A;  5EGE A;  5C4X K;  2CW0 A;  1I6H C;  2NVQ C;  1INN A;  1TWF K;  2JA7 C;  1B4A A;  2O5I A;  4WJ4 A;  2YU9 K;  4LK1 A;  2PHC B;  1J98 A;  3MML B;  1ZVU A;  4GT9 A;  2W7V A;  1WOR A;  1YNJ A;  1YX2 A;  3HOW K;  4BY1 C;  3M3Y C;  2VUM C;  3S17 C;  2R7Z A;  5FJ8 K;  4BXX C;  2BE5 A;  4KMD A;  1O28 A;  2B63 C;  1XPP A; 
#chains in the Genus database with same CATH homology
 2EBB A;  3JST A;  1DCH A;  1USM A;  2V6S A;  3HXA A;  1DCO A;  1F93 A;  1USO A;  4LOW A;  4WIL A;  4C45 A;  1DCP A;  2V6U A;  2V6T A;  1RU0 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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