3JSTA

Crystal structure of transcriptional coactivator/pterin dehydratase from brucella melitensis
Total Genus 29
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
29
sequence length
97
structure length
97
Chain Sequence
MARNRLTESEMNEALRALDGWQKVDGREAITRSFKFKDFSTAFGFMAQAALYAEKLDHHPEWFNAYNRVDVTLATHSENGVTELDIKMARKMNAIAG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Lyase
molecule keywords Putative pterin-4-alpha-carbinolamine dehydratase
publication title Crystal structure of transcriptional coactivator/pterin dehydratase from Brucella Melitensis
rcsb
source organism Brucella melitensis
total genus 29
structure length 97
sequence length 97
chains with identical sequence B
ec nomenclature ec 4.2.1.96: 4a-hydroxytetrahydrobiopterin dehydratase.
pdb deposition date 2009-09-10

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01329 Pterin_4a Pterin 4 alpha carbinolamine dehydratase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.1360.20 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 Transcriptional coactivator/pterin dehydratase 3jstA00
1RU0A 2EBBA 3JSTA 4WILA 1DCHA 2V6TA 4LOWA 2V6UA 1DCOA 1USOA 1DCPA 3HXAA 1F93A 1USMA 2V6SA 4C45A
chains in the Genus database with same CATH superfamily
2P8TA 3HOWK 1WQHA 1TWHK 3GSIA 3S1MK 1V5VA 3S1NC 2B63K 3GTPK 1XZPB 5TJ3A 2R93A 3RZOC 1F9NA 3GTOC 2PPBA 4BLAA 4GFQA 5M5YK 1I50C 3V4GA 1Y1WA 5M3FK 2JA6A 3GTKK 2FQTA 4YG2A 3IPJA 3GEEA 4BKWA 3K7AC 2E2IA 5C4JC 4FM9A 1XXAA 3TFIA 4A93C 3GTLC 1B4BA 4Y52C 3GTGK 3S1QK 2Y0SD 3S14K 3CAGA 1PJ5A 3FOEA 1TWHA 4YFXA 3H0GK 2CW0A 4C3JK 1WOOA 2XCOA 4GTLA 4XCHA 1L0WA 3H3VD 3TFHA 1VLOA 4C2MC 4MEYA 1VJEA 3S17C 1Y1VC 2YU9K 1I6HK 3NUHA 3GEIA 4OINA 4X6AC 1WCMC 1I6VA 2R92K 4C3IC 4G7OA 5C3EC 3HOZK 1Y1VA 4WJ4A 3ADAC 5C44K 1F7UA 1WCMA 2A6HA 4BY7C 3PO3K 2WAQD 1R9TK 1B4AA 4KC6A 3M3YK 3H0GA 3AH5A 1TWGA 2Y0SL 4A3MK 3GTQK 1XXCA 4A3JK 3VA7A 3S15C 1SMYA 4LK1A 2YU9A 1JQWA 3H3VL 1O29A 4A3DK 1BDFA 2R92A 1PJ6A 1SFOK 3S2HC 4GTDA 5C4XK 3S16C 3HOXK 4KM9A 1VRQC 2NVYC 1R9TA 3Q3QA 1BJTA 4GTEA 1HQMA 2NVXK 2WAQL 2JA5K 3S1RK 1ZVUA 1IBAA 1WQGA 3BP8C 3GTQA 1DD5A 1J98A 1XXBA 1TWAC 5EGHA 2KWAA 5M3MK 2XCQA 3QX3A 4OIQA 1DCOA 5JVOA 2E2HC 3FKIC 4KB2A 3I4NK 3OREA 2V6SA 1TWCC 1ZYRA 5FJ8K 3FOFA 2VUMC 4A3LC 4Y7NK 2E2JC 5IYDC 1SFOA 4A3EC 1VH2A 5IORA 3L4KA 3OPFA 2PHCB 1WIHA 1JVIA 2NVTC 2NVXA 5D4DA 2JA5A 1YNNA 3HOUK 1WQFA 3I4MC 1O2AA 4FZBA 3GTJA 3GTMK 4A3GC 2NVQK 2R93C 1BGWA 4GTAA 4WJ3M 4KMUA 1Y1WC 4J3NA 3S2DC 2JA6C 3GTOK 4BBRC 1RU0A 4G0UA 1K83K 2V6TA 4LOWA 3HOYC 5CJ9A 4KARA 4BY1C 2E2IC 4C3HC 2O5JA 2R7ZK 3HXAA 3HOWC 1TWHC 3G4AA 2Y3PA 3LAJA 1J6VA 2WB1L 4A93K 3S1MC 4Y52K 3GTMA 1TWFK 5FLMC 1XZQA 4A3IK 4G7HA 4MEXA 3PO2K 4MQ9A 2B63A 3GTPA 2CFAA 3M4OC 1WOPA 1K83A 2EBBA 1PJ7A 4YFNA 3GTKA 4A3CC 3S1QC 1INNA 4KM8A 2R7ZA 5HL8A 4XLPA 2JA8K 3H0GC 3AQOA 3N0CA 4LLGA 1TWGC 3SZZA 5L46A 4GT9A 4C3JC 4LQYA 3GTGA 4JK1A 5EGEA 1TWFA 4A3KK 3CQZK 2YU9C 4KB4A 2R92C 4BXXK 1C0AA 3HOZC 3S15K 5IYCK 4A3BK 4LJZA 4KDDA 1F93A 5JFEA 4LK0A 3FHZA 1R9TC 3BUEA 5IP7K 3AD7C 3S0XA 5IP9K 3M3YC 4RMFA 2JA7K 4A3MC 3GTQC 4C45A 3RZDC 3CQZA 1IL2A 1G51A 2GSUA 4A3DC 3AQPA 5IOSA 4QIWD 2E2HK 1SFOC 1TWCK 3HOXC 3MMLB 1WSVA 4G7ZA 4QJVA 1WSRA 2VUMK 4A3LK 3G4CA 1J6WA 1O2BA 2RGRA 1I3QK 4A3EK 2NVXC 1X31C 1EQRA 2JA5C 2A6EA 2GSNA 1IW7A 1UV7A 4BBSK 4Q4ZA 2W7VA 4ZH4A 2A68A 3I4NC 3GTJC 2WB1D 3I4MK 2XCRB 5IYBK 2D6FC 4Y7NC 1O25A 3LPXA 3TFJA 4GZYA 4G0VA 4ILDA 4A3GK 4QIWL 5M5WK 2PA8D 3S1NK 4P9SA 1I3QA 3A8KA 2ZUEA 2JA6K 1WORA 3RZOK 1YX2A 4BBRK 1O27A 4KN4A 1I50K 4KATA 5TMFA 1EK8A 4A3FC 1XZQB 2E2IK 2ZFZA 3HOVC 1AB4A 4C3HK 2CFAB 3GTMC 1XPPA 5TMCA 2NVQC 4NOIA 1DCHA 3K7AK 5C4JK 4OIRA 1EFWA 3GTLK 1ZBSA 1YCLA 3JSTA 2B63C 3GTPC 4KMDA 2V6UA 5IOTA 5FLMK 1K83C 1BS2A 1O28A 3GIRA 2RH6A 1IS1A 2PA8L 3GTOA 4P5BA 3M4OK 3GTKC 4C2MK 3S17K 4G0WA 1Y1VK 2R7ZC 1I50A 4X6AK 1XZPA 1WCMK 3GDZA 4C3IK 4XLNA 4A3CK 3GTGC 5C3EK 4KASA 3S14C 4PAAA 1IQ0A 2O5IA 1TWFC 1USMA 4XSZA 4AH6A 3GEHA 1JOEA 4BY7K 1TWGK 3GTLA 4A3IC 3PO2C 3ERED 5M5XK 1O26A 4WILA 4OIOA 1I6HC 1YNJA 5E68A 4P5AA 2JH3A 4KAWX 4O2DA 1F7VA 3EQLA 4XSXA 1O2FB 5C44C 2JA8C 3TTGA 3PO3C 1VGXA 3SZYA 3HKZD 3S2HK 3S16K 3A8JA 4A3KC 2A69A 5IOQA 3CQZC 2NVYK 3AD8C 2GAGC 4QJVB 4AYBD 1GE9A 1ZQ1C 2FQOA 3RZDK 4A3JC 4BXXC 4GTCA 5IYCC 4A3BC 3DXJA 4YFKA 1TWAK 3WODA 2PMZD 3OEPA 3A8IA 3FKIK 5C4XC 3T01A 2BE5A 5IP7C 3T02A 3LAPA 1DCPA 4GTFA 5IP9C 2JA7C 3T00A 2E2JK 5IYDK 1KQ4A 4DDQA 4GTBA 5CHPA 3S1RC 2JA7A 1WOSA 1ZXOA 3HKZL 4BLBA 2NVYA 4LR2A 2NVTK 3BP3A 4KN7A 4KMAA 4AYBL 3GTJK 1EH1A 1TWAA 3AD9C 4KMHA 1EI6A 1O24A 2P5MA 2E2HA 3FKIA 1I3QC 2PMZL 2GAHC 1TWCA 2R93K 3N3YA 2VUMA 1USOA 4BBSC 1Y1WK 3S2DK 1HI9A 1J6XA 2GSOA 1IE0A 3HOYK 4PABA 4OIPA 3HOUC 4Q5SA 4BY1K 3N0BA 4A3FK 2ZUFA 5IYBC 1ISEA 4M1XA 3HOVK 3L4JA
chains in the Genus database with same CATH topology
1RU0A 2EBBA 3JSTA 4WILA 1DCHA 2V6TA 4LOWA 2V6UA 1DCOA 1USOA 1DCPA 3HXAA 1F93A 1USMA 2V6SA 4C45A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1RU0 A;  2EBB A;  3JST A;  4WIL A;  1DCH A;  2V6T A;  4LOW A;  2V6U A;  1DCO A;  1USO A;  1DCP A;  3HXA A;  1F93 A;  1USM A;  2V6S A;  4C45 A; 
#chains in the Genus database with same CATH topology
 2P8T A;  3HOW K;  1WQH A;  1TWH K;  3GSI A;  3S1M K;  1V5V A;  3S1N C;  2B63 K;  3GTP K;  1XZP B;  5TJ3 A;  2R93 A;  3RZO C;  1F9N A;  3GTO C;  2PPB A;  4BLA A;  4GFQ A;  5M5Y K;  1I50 C;  3V4G A;  1Y1W A;  5M3F K;  2JA6 A;  3GTK K;  2FQT A;  4YG2 A;  3IPJ A;  3GEE A;  4BKW A;  3K7A C;  2E2I A;  5C4J C;  4FM9 A;  1XXA A;  3TFI A;  4A93 C;  3GTL C;  1B4B A;  4Y52 C;  3GTG K;  3S1Q K;  2Y0S D;  3S14 K;  3CAG A;  1PJ5 A;  3FOE A;  1TWH A;  4YFX A;  3H0G K;  2CW0 A;  4C3J K;  1WOO A;  2XCO A;  4GTL A;  4XCH A;  1L0W A;  3H3V D;  3TFH A;  1VLO A;  4C2M C;  4MEY A;  1VJE A;  3S17 C;  1Y1V C;  2YU9 K;  1I6H K;  3NUH A;  3GEI A;  4OIN A;  4X6A C;  1WCM C;  1I6V A;  2R92 K;  4C3I C;  4G7O A;  5C3E C;  3HOZ K;  1Y1V A;  4WJ4 A;  3ADA C;  5C44 K;  1F7U A;  1WCM A;  2A6H A;  4BY7 C;  3PO3 K;  2WAQ D;  1R9T K;  1B4A A;  4KC6 A;  3M3Y K;  3H0G A;  3AH5 A;  1TWG A;  2Y0S L;  4A3M K;  3GTQ K;  1XXC A;  4A3J K;  3VA7 A;  3S15 C;  1SMY A;  4LK1 A;  2YU9 A;  1JQW A;  3H3V L;  1O29 A;  4A3D K;  1BDF A;  2R92 A;  1PJ6 A;  1SFO K;  3S2H C;  4GTD A;  5C4X K;  3S16 C;  3HOX K;  4KM9 A;  1VRQ C;  2NVY C;  1R9T A;  3Q3Q A;  1BJT A;  4GTE A;  1HQM A;  2NVX K;  2WAQ L;  2JA5 K;  3S1R K;  1ZVU A;  1IBA A;  1WQG A;  3BP8 C;  3GTQ A;  1DD5 A;  1J98 A;  1XXB A;  1TWA C;  5EGH A;  2KWA A;  5M3M K;  2XCQ A;  3QX3 A;  4OIQ A;  1DCO A;  5JVO A;  2E2H C;  3FKI C;  4KB2 A;  3I4N K;  3ORE A;  2V6S A;  1TWC C;  1ZYR A;  5FJ8 K;  3FOF A;  2VUM C;  4A3L C;  4Y7N K;  2E2J C;  5IYD C;  1SFO A;  4A3E C;  1VH2 A;  5IOR A;  3L4K A;  3OPF A;  2PHC B;  1WIH A;  1JVI A;  2NVT C;  2NVX A;  5D4D A;  2JA5 A;  1YNN A;  3HOU K;  1WQF A;  3I4M C;  1O2A A;  4FZB A;  3GTJ A;  3GTM K;  4A3G C;  2NVQ K;  2R93 C;  1BGW A;  4GTA A;  4WJ3 M;  4KMU A;  1Y1W C;  4J3N A;  3S2D C;  2JA6 C;  3GTO K;  4BBR C;  1RU0 A;  4G0U A;  1K83 K;  2V6T A;  4LOW A;  3HOY C;  5CJ9 A;  4KAR A;  4BY1 C;  2E2I C;  4C3H C;  2O5J A;  2R7Z K;  3HXA A;  3HOW C;  1TWH C;  3G4A A;  2Y3P A;  3LAJ A;  1J6V A;  2WB1 L;  4A93 K;  3S1M C;  4Y52 K;  3GTM A;  1TWF K;  5FLM C;  1XZQ A;  4A3I K;  4G7H A;  4MEX A;  3PO2 K;  4MQ9 A;  2B63 A;  3GTP A;  2CFA A;  3M4O C;  1WOP A;  1K83 A;  2EBB A;  1PJ7 A;  4YFN A;  3GTK A;  4A3C C;  3S1Q C;  1INN A;  4KM8 A;  2R7Z A;  5HL8 A;  4XLP A;  2JA8 K;  3H0G C;  3AQO A;  3N0C A;  4LLG A;  1TWG C;  3SZZ A;  5L46 A;  4GT9 A;  4C3J C;  4LQY A;  3GTG A;  4JK1 A;  5EGE A;  1TWF A;  4A3K K;  3CQZ K;  2YU9 C;  4KB4 A;  2R92 C;  4BXX K;  1C0A A;  3HOZ C;  3S15 K;  5IYC K;  4A3B K;  4LJZ A;  4KDD A;  1F93 A;  5JFE A;  4LK0 A;  3FHZ A;  1R9T C;  3BUE A;  5IP7 K;  3AD7 C;  3S0X A;  5IP9 K;  3M3Y C;  4RMF A;  2JA7 K;  4A3M C;  3GTQ C;  4C45 A;  3RZD C;  3CQZ A;  1IL2 A;  1G51 A;  2GSU A;  4A3D C;  3AQP A;  5IOS A;  4QIW D;  2E2H K;  1SFO C;  1TWC K;  3HOX C;  3MML B;  1WSV A;  4G7Z A;  4QJV A;  1WSR A;  2VUM K;  4A3L K;  3G4C A;  1J6W A;  1O2B A;  2RGR A;  1I3Q K;  4A3E K;  2NVX C;  1X31 C;  1EQR A;  2JA5 C;  2A6E A;  2GSN A;  1IW7 A;  1UV7 A;  4BBS K;  4Q4Z A;  2W7V A;  4ZH4 A;  2A68 A;  3I4N C;  3GTJ C;  2WB1 D;  3I4M K;  2XCR B;  5IYB K;  2D6F C;  4Y7N C;  1O25 A;  3LPX A;  3TFJ A;  4GZY A;  4G0V A;  4ILD A;  4A3G K;  4QIW L;  5M5W K;  2PA8 D;  3S1N K;  4P9S A;  1I3Q A;  3A8K A;  2ZUE A;  2JA6 K;  1WOR A;  3RZO K;  1YX2 A;  4BBR K;  1O27 A;  4KN4 A;  1I50 K;  4KAT A;  5TMF A;  1EK8 A;  4A3F C;  1XZQ B;  2E2I K;  2ZFZ A;  3HOV C;  1AB4 A;  4C3H K;  2CFA B;  3GTM C;  1XPP A;  5TMC A;  2NVQ C;  4NOI A;  1DCH A;  3K7A K;  5C4J K;  4OIR A;  1EFW A;  3GTL K;  1ZBS A;  1YCL A;  3JST A;  2B63 C;  3GTP C;  4KMD A;  2V6U A;  5IOT A;  5FLM K;  1K83 C;  1BS2 A;  1O28 A;  3GIR A;  2RH6 A;  1IS1 A;  2PA8 L;  3GTO A;  4P5B A;  3M4O K;  3GTK C;  4C2M K;  3S17 K;  4G0W A;  1Y1V K;  2R7Z C;  1I50 A;  4X6A K;  1XZP A;  1WCM K;  3GDZ A;  4C3I K;  4XLN A;  4A3C K;  3GTG C;  5C3E K;  4KAS A;  3S14 C;  4PAA A;  1IQ0 A;  2O5I A;  1TWF C;  1USM A;  4XSZ A;  4AH6 A;  3GEH A;  1JOE A;  4BY7 K;  1TWG K;  3GTL A;  4A3I C;  3PO2 C;  3ERE D;  5M5X K;  1O26 A;  4WIL A;  4OIO A;  1I6H C;  1YNJ A;  5E68 A;  4P5A A;  2JH3 A;  4KAW X;  4O2D A;  1F7V A;  3EQL A;  4XSX A;  1O2F B;  5C44 C;  2JA8 C;  3TTG A;  3PO3 C;  1VGX A;  3SZY A;  3HKZ D;  3S2H K;  3S16 K;  3A8J A;  4A3K C;  2A69 A;  5IOQ A;  3CQZ C;  2NVY K;  3AD8 C;  2GAG C;  4QJV B;  4AYB D;  1GE9 A;  1ZQ1 C;  2FQO A;  3RZD K;  4A3J C;  4BXX C;  4GTC A;  5IYC C;  4A3B C;  3DXJ A;  4YFK A;  1TWA K;  3WOD A;  2PMZ D;  3OEP A;  3A8I A;  3FKI K;  5C4X C;  3T01 A;  2BE5 A;  5IP7 C;  3T02 A;  3LAP A;  1DCP A;  4GTF A;  5IP9 C;  2JA7 C;  3T00 A;  2E2J K;  5IYD K;  1KQ4 A;  4DDQ A;  4GTB A;  5CHP A;  3S1R C;  2JA7 A;  1WOS A;  1ZXO A;  3HKZ L;  4BLB A;  2NVY A;  4LR2 A;  2NVT K;  3BP3 A;  4KN7 A;  4KMA A;  4AYB L;  3GTJ K;  1EH1 A;  1TWA A;  3AD9 C;  4KMH A;  1EI6 A;  1O24 A;  2P5M A;  2E2H A;  3FKI A;  1I3Q C;  2PMZ L;  2GAH C;  1TWC A;  2R93 K;  3N3Y A;  2VUM A;  1USO A;  4BBS C;  1Y1W K;  3S2D K;  1HI9 A;  1J6X A;  2GSO A;  1IE0 A;  3HOY K;  4PAB A;  4OIP A;  3HOU C;  4Q5S A;  4BY1 K;  3N0B A;  4A3F K;  2ZUF A;  5IYB C;  1ISE A;  4M1X A;  3HOV K;  3L4J A; 
#chains in the Genus database with same CATH homology
 1RU0 A;  2EBB A;  3JST A;  4WIL A;  1DCH A;  2V6T A;  4LOW A;  2V6U A;  1DCO A;  1USO A;  1DCP A;  3HXA A;  1F93 A;  1USM A;  2V6S A;  4C45 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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