3JSTA

Crystal structure of transcriptional coactivator/pterin dehydratase from brucella melitensis
Total Genus 29
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
29
sequence length
97
structure length
97
Chain Sequence
b'MARNRLTESEMNEALRALDGWQKVDGREAITRSFKFKDFSTAFGFMAQAALYAEKLDHHPEWFNAYNRVDVTLATHSENGVTELDIKMARKMNAIAG'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Putative pterin-4-alpha-carbinolamine dehydratase
publication title Crystal structure of transcriptional coactivator/pterin dehydratase from Brucella Melitensis
rcsb
source organism Brucella melitensis
molecule tags Lyase
total genus 29
structure length 97
sequence length 97
chains with identical sequence B
ec nomenclature ec 4.2.1.96: 4a-hydroxytetrahydrobiopterin dehydratase.
pdb deposition date 2009-09-10

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01329 Pterin_4a Pterin 4 alpha carbinolamine dehydratase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.1360.20 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 Transcriptional coactivator/pterin dehydratase 3jstA00
1DCPA 1USOA 2V6UA 1USMA 4WILA 4C45A 2EBBA 4LOWA 1DCOA 2V6SA 1F93A 1RU0A 2V6TA 3JSTA 3HXAA 1DCHA
chains in the Genus database with same CATH superfamily
1I3QA 5JVOA 2XCQA 1XXBA 4PAAA 3EQLA 3GTJK 3HOZC 2O5IA 3S2HK 2GAGC 3CQZC 4G0WA 3GDZA 1IS1A 2VUMA 3HOVC 1DCHA 1YX2A 4A3GK 1KQ4A 3LAPA 1WSVA 3GIRA 4C2MK 1Y1WA 1IQ0A 3A8IA 3GTLC 2R7ZK 2A68A 4BLBA 3S2DK 1O2FB 1TWAC 3CAGA 1Y1VK 3G4CA 1WOSA 3TFIA 4BLAA 1IE0A 1TWFC 2NVTK 2Y0SL 4KDDA 4M1XA 5M3MK 3QX3A 4NOIA 4J3NA 4Y7NC 4KMUA 4KN7A 5C4JK 3GTKA 3N0CA 4LQYA 5M3FK 4PABA 5C44C 4LLGA 3GTMA 5IYBC 2PPBA 2FQOA 3WODA 1TWCC 2RGRA 4BBRK 5M5XK 2NVXC 1WOOA 4P5BA 3LAJA 4A93K 2E2HC 2R92K 4GTDA 2R7ZA 4QIWL 4OIRA 3S16C 2JA5K 2B63C 1XZQB 1VJEA 5JFEA 4P9SA 2E2JC 1I50A 4MEXA 5IYDC 3S1RK 1TWGK 3FOFA 4LJZA 3H0GK 4C3IK 1JQWA 4YFNA 4GTEA 3T01A 4WJ3M 1XXAA 1XPPA 4AYBD 4A3KK 4MQ9A 2YU9C 3S14C 1V5VA 2V6TA 3JSTA 2W7VA 3S2HC 4BY1K 3H3VL 2R92A 2PA8L 5TJ3A 4A3JK 4GFQA 4C3HK 4KMDA 4G0VA 2JA5A 1I6HC 4XLPA 2O5JA 5C4XC 3PO3K 4GTLA 3TTGA 5IYCC 1WCMC 2BE5A 4KB4A 5C3EC 3SZYA 1SFOK 3L4KA 4G7OA 4LOWA 1VH2A 2JA6K 1I3QK 5IOSA 2R93A 1Y1VC 3S1QC 4YG2A 2NVTC 1O2BA 4Y52K 2VUMK 3PO2K 4GZYA 3HKZD 3TFHA 4KB2A 1WIHA 4KMAA 1BJTA 3HOYC 5IP7K 1Y1WK 3GEHA 2JA8K 5IOTA 4X6AK 4YFKA 2KWAA 4BBRC 4QJVB 4GTAA 3HOWK 4A93C 1WQGA 3A8KA 2NVYA 5CJ9A 4MEYA 3Q3QA 1WOPA 3TFJA 1TWAA 4A3LK 2JA6A 3M3YC 3GTPA 1DCPA 3GTKK 3HOXK 3S1MK 3FOEA 4KARA 2WB1D 3S17C 1INNA 3GTMK 4QJVA 5EGEA 1TWGC 5IOQA 4G7ZA 4P5AA 4XLNA 4FZBA 4KN4A 4AH6A 1IBAA 4A3DK 4OINA 1JOEA 4C3JC 1TWHC 4A3MC 1B4AA 2WAQD 4KATA 1I50K 3GTQC 3RZOC 1HI9A 2E2HA 2JA7C 4A3FC 1USOA 1JVIA 4A3IK 3GTGK 4C3HC 3ADAC 3M4OK 3FKIC 3K7AC 2V6UA 4A3EK 1ZYRA 3MMLB 1R9TC 3HXAA 2E2IC 1SFOC 4BY7C 3S1NC 3GEEA 3V4GA 3AD7C 1L0WA 2A6EA 3VA7A 1EQRA 5M5WK 4KMHA 3GTOK 1PJ6A 1UV7A 3T02A 4Y52C 3I4MK 3PO2C 3HOUK 4LK1A 4LK0A 1BS2A 1ZBSA 1EI6A 1K83A 2JA8C 3GTGA 4A3CC 5TMFA 4GTFA 1WSRA 3I4NK 2R93K 3RZDK 4G0UA 3S15C 1SMYA 5IP9K 2Y0SD 1EK8A 1DD5A 2XCRB 2PHCB 4BKWA 4GTCA 2RH6A 2GAHC 3GTJC 4Q5SA 1F7UA 3GTOA 1O26A 3BP8C 1B4BA 1XZPA 1AB4A 1J6VA 3GTMC 1X31C 4OIPA 4A3GC 1BDFA 4C2MC 2CW0A 2NVYK 3GTLK 2R7ZC 4YFXA 5D4DA 1TWAK 3GEIA 4QIWD 3S2DC 1I50C 3GTPK 4RMFA 4XSXA 3IPJA 1DCOA 5CHPA 1O24A 5C4JC 3CQZA 4A3EC 4FM9A 5C44K 3ERED 1ZVUA 5IYBK 3SZZA 1WQHA 1ZXOA 3A8JA 1C0AA 4WILA 1TWCK 1IL2A 2ZUFA 4KM8A 2XCOA 2E2HK 2GSNA 4KM9A 3GTLA 3S16K 2R92C 3H3VD 3LPXA 2JA5C 2PA8D 2E2JK 3GTQA 1ZQ1C 1TWFA 2ZFZA 1J6WA 5IYDK 3FHZA 3S1RC 5L46A 4DDQA 4C3IC 3BUEA 3DXJA 3H0GC 3I4NC 1VLOA 2CFAB 4KASA 2E2IA 3AQOA 4BXXK 1F7VA 4XCHA 1TWCA 2NVXA 2YU9K 3S14K 3OREA 4A3KC 2Y3PA 1F93A 4G7HA 4BY1C 1O25A 1GE9A 1K83K 4KAWX 4A3JC 2B63A 2GSUA 2NVQK 1RU0A 3OPFA 1O28A 2CFAA 1I6HK 4A3BK 1O27A 3AQPA 5C4XK 2A6HA 1YNNA 4KC6A 3N3YA 5IYCK 3PO3C 1WCMK 5TMCA 5C3EK 1ISEA 4BBSK 1WQFA 2NVYC 5FLMK 2JA6C 1I3QC 3S1QK 3GTPC 1USMA 4OIQA 4AYBL 2VUMC 4OIOA 1VRQC 2YU9A 4WJ4A 3GTJA 3HOYK 2PMZL 5IP7C 1J6XA 3AD8C 1Y1WC 2D6FC 4X6AC 3AD9C 1IW7A 5E68A 1XZPB 1WCMA 3AH5A 5EGHA 1VGXA 3HOWC 1O2AA 2P8TA 2EBBA 1G51A 4A3LC 1Y1VA 4JK1A 1I6VA 3M3YK 3HOZK 2A69A 1PJ5A 1EH1A 3GTKC 3CQZK 3HOXC 3S1MC 3HKZL 3S17K 1F9NA 4Q4ZA 3HOVK 4XSZA 4ZH4A 1XXCA 3L4JA 1XZQA 3OEPA 4A3DC 4C3JK 1WORA 3BP3A 4BXXC 1TWHK 2P5MA 3GSIA 4A3MK 3S0XA 3GTQK 1TWFK 3RZOK 5IORA 2JA7K 4A3FK 2PMZD 2JH3A 4A3IC 1K83C 2GSOA 4Y7NK 2NVQC 3GTGC 1O29A 3FKIK 3M4OC 4A3BC 3K7AK 4C45A 2WB1L 1R9TK 1J98A 3N0BA 2E2IK 1TWGA 4BBSC 4BY7K 3H0GA 5FLMC 3S1NK 4GT9A 4GTBA 2NVXK 5M5YK 3G4AA 3GTOC 1YNJA 1TWHA 2B63K 3I4MC 2WAQL 1EFWA 1BGWA 2FQTA 5FJ8K 3HOUC 2V6SA 2JA7A 4LR2A 3NUHA 4A3CK 5HL8A 3FKIA 1PJ7A 4O2DA 3T00A 2R93C 1R9TA 3RZDC 3S15K 1HQMA 4ILDA 1YCLA 5IP9C 1SFOA 2ZUEA
chains in the Genus database with same CATH topology
1DCPA 1USOA 2V6UA 1USMA 4WILA 4C45A 2EBBA 4LOWA 1DCOA 2V6SA 1F93A 1RU0A 2V6TA 3JSTA 3HXAA 1DCHA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1DCP A;  1USO A;  2V6U A;  1USM A;  4WIL A;  4C45 A;  2EBB A;  4LOW A;  1DCO A;  2V6S A;  1F93 A;  1RU0 A;  2V6T A;  3JST A;  3HXA A;  1DCH A; 
#chains in the Genus database with same CATH topology
 1I3Q A;  5JVO A;  2XCQ A;  1XXB A;  4PAA A;  3EQL A;  3GTJ K;  3HOZ C;  2O5I A;  3S2H K;  2GAG C;  3CQZ C;  4G0W A;  3GDZ A;  1IS1 A;  2VUM A;  3HOV C;  1DCH A;  1YX2 A;  4A3G K;  1KQ4 A;  3LAP A;  1WSV A;  3GIR A;  4C2M K;  1Y1W A;  1IQ0 A;  3A8I A;  3GTL C;  2R7Z K;  2A68 A;  4BLB A;  3S2D K;  1O2F B;  1TWA C;  3CAG A;  1Y1V K;  3G4C A;  1WOS A;  3TFI A;  4BLA A;  1IE0 A;  1TWF C;  2NVT K;  2Y0S L;  4KDD A;  4M1X A;  5M3M K;  3QX3 A;  4NOI A;  4J3N A;  4Y7N C;  4KMU A;  4KN7 A;  5C4J K;  3GTK A;  3N0C A;  4LQY A;  5M3F K;  4PAB A;  5C44 C;  4LLG A;  3GTM A;  5IYB C;  2PPB A;  2FQO A;  3WOD A;  1TWC C;  2RGR A;  4BBR K;  5M5X K;  2NVX C;  1WOO A;  4P5B A;  3LAJ A;  4A93 K;  2E2H C;  2R92 K;  4GTD A;  2R7Z A;  4QIW L;  4OIR A;  3S16 C;  2JA5 K;  2B63 C;  1XZQ B;  1VJE A;  5JFE A;  4P9S A;  2E2J C;  1I50 A;  4MEX A;  5IYD C;  3S1R K;  1TWG K;  3FOF A;  4LJZ A;  3H0G K;  4C3I K;  1JQW A;  4YFN A;  4GTE A;  3T01 A;  4WJ3 M;  1XXA A;  1XPP A;  4AYB D;  4A3K K;  4MQ9 A;  2YU9 C;  3S14 C;  1V5V A;  2V6T A;  3JST A;  2W7V A;  3S2H C;  4BY1 K;  3H3V L;  2R92 A;  2PA8 L;  5TJ3 A;  4A3J K;  4GFQ A;  4C3H K;  4KMD A;  4G0V A;  2JA5 A;  1I6H C;  4XLP A;  2O5J A;  5C4X C;  3PO3 K;  4GTL A;  3TTG A;  5IYC C;  1WCM C;  2BE5 A;  4KB4 A;  5C3E C;  3SZY A;  1SFO K;  3L4K A;  4G7O A;  4LOW A;  1VH2 A;  2JA6 K;  1I3Q K;  5IOS A;  2R93 A;  1Y1V C;  3S1Q C;  4YG2 A;  2NVT C;  1O2B A;  4Y52 K;  2VUM K;  3PO2 K;  4GZY A;  3HKZ D;  3TFH A;  4KB2 A;  1WIH A;  4KMA A;  1BJT A;  3HOY C;  5IP7 K;  1Y1W K;  3GEH A;  2JA8 K;  5IOT A;  4X6A K;  4YFK A;  2KWA A;  4BBR C;  4QJV B;  4GTA A;  3HOW K;  4A93 C;  1WQG A;  3A8K A;  2NVY A;  5CJ9 A;  4MEY A;  3Q3Q A;  1WOP A;  3TFJ A;  1TWA A;  4A3L K;  2JA6 A;  3M3Y C;  3GTP A;  1DCP A;  3GTK K;  3HOX K;  3S1M K;  3FOE A;  4KAR A;  2WB1 D;  3S17 C;  1INN A;  3GTM K;  4QJV A;  5EGE A;  1TWG C;  5IOQ A;  4G7Z A;  4P5A A;  4XLN A;  4FZB A;  4KN4 A;  4AH6 A;  1IBA A;  4A3D K;  4OIN A;  1JOE A;  4C3J C;  1TWH C;  4A3M C;  1B4A A;  2WAQ D;  4KAT A;  1I50 K;  3GTQ C;  3RZO C;  1HI9 A;  2E2H A;  2JA7 C;  4A3F C;  1USO A;  1JVI A;  4A3I K;  3GTG K;  4C3H C;  3ADA C;  3M4O K;  3FKI C;  3K7A C;  2V6U A;  4A3E K;  1ZYR A;  3MML B;  1R9T C;  3HXA A;  2E2I C;  1SFO C;  4BY7 C;  3S1N C;  3GEE A;  3V4G A;  3AD7 C;  1L0W A;  2A6E A;  3VA7 A;  1EQR A;  5M5W K;  4KMH A;  3GTO K;  1PJ6 A;  1UV7 A;  3T02 A;  4Y52 C;  3I4M K;  3PO2 C;  3HOU K;  4LK1 A;  4LK0 A;  1BS2 A;  1ZBS A;  1EI6 A;  1K83 A;  2JA8 C;  3GTG A;  4A3C C;  5TMF A;  4GTF A;  1WSR A;  3I4N K;  2R93 K;  3RZD K;  4G0U A;  3S15 C;  1SMY A;  5IP9 K;  2Y0S D;  1EK8 A;  1DD5 A;  2XCR B;  2PHC B;  4BKW A;  4GTC A;  2RH6 A;  2GAH C;  3GTJ C;  4Q5S A;  1F7U A;  3GTO A;  1O26 A;  3BP8 C;  1B4B A;  1XZP A;  1AB4 A;  1J6V A;  3GTM C;  1X31 C;  4OIP A;  4A3G C;  1BDF A;  4C2M C;  2CW0 A;  2NVY K;  3GTL K;  2R7Z C;  4YFX A;  5D4D A;  1TWA K;  3GEI A;  4QIW D;  3S2D C;  1I50 C;  3GTP K;  4RMF A;  4XSX A;  3IPJ A;  1DCO A;  5CHP A;  1O24 A;  5C4J C;  3CQZ A;  4A3E C;  4FM9 A;  5C44 K;  3ERE D;  1ZVU A;  5IYB K;  3SZZ A;  1WQH A;  1ZXO A;  3A8J A;  1C0A A;  4WIL A;  1TWC K;  1IL2 A;  2ZUF A;  4KM8 A;  2XCO A;  2E2H K;  2GSN A;  4KM9 A;  3GTL A;  3S16 K;  2R92 C;  3H3V D;  3LPX A;  2JA5 C;  2PA8 D;  2E2J K;  3GTQ A;  1ZQ1 C;  1TWF A;  2ZFZ A;  1J6W A;  5IYD K;  3FHZ A;  3S1R C;  5L46 A;  4DDQ A;  4C3I C;  3BUE A;  3DXJ A;  3H0G C;  3I4N C;  1VLO A;  2CFA B;  4KAS A;  2E2I A;  3AQO A;  4BXX K;  1F7V A;  4XCH A;  1TWC A;  2NVX A;  2YU9 K;  3S14 K;  3ORE A;  4A3K C;  2Y3P A;  1F93 A;  4G7H A;  4BY1 C;  1O25 A;  1GE9 A;  1K83 K;  4KAW X;  4A3J C;  2B63 A;  2GSU A;  2NVQ K;  1RU0 A;  3OPF A;  1O28 A;  2CFA A;  1I6H K;  4A3B K;  1O27 A;  3AQP A;  5C4X K;  2A6H A;  1YNN A;  4KC6 A;  3N3Y A;  5IYC K;  3PO3 C;  1WCM K;  5TMC A;  5C3E K;  1ISE A;  4BBS K;  1WQF A;  2NVY C;  5FLM K;  2JA6 C;  1I3Q C;  3S1Q K;  3GTP C;  1USM A;  4OIQ A;  4AYB L;  2VUM C;  4OIO A;  1VRQ C;  2YU9 A;  4WJ4 A;  3GTJ A;  3HOY K;  2PMZ L;  5IP7 C;  1J6X A;  3AD8 C;  1Y1W C;  2D6F C;  4X6A C;  3AD9 C;  1IW7 A;  5E68 A;  1XZP B;  1WCM A;  3AH5 A;  5EGH A;  1VGX A;  3HOW C;  1O2A A;  2P8T A;  2EBB A;  1G51 A;  4A3L C;  1Y1V A;  4JK1 A;  1I6V A;  3M3Y K;  3HOZ K;  2A69 A;  1PJ5 A;  1EH1 A;  3GTK C;  3CQZ K;  3HOX C;  3S1M C;  3HKZ L;  3S17 K;  1F9N A;  4Q4Z A;  3HOV K;  4XSZ A;  4ZH4 A;  1XXC A;  3L4J A;  1XZQ A;  3OEP A;  4A3D C;  4C3J K;  1WOR A;  3BP3 A;  4BXX C;  1TWH K;  2P5M A;  3GSI A;  4A3M K;  3S0X A;  3GTQ K;  1TWF K;  3RZO K;  5IOR A;  2JA7 K;  4A3F K;  2PMZ D;  2JH3 A;  4A3I C;  1K83 C;  2GSO A;  4Y7N K;  2NVQ C;  3GTG C;  1O29 A;  3FKI K;  3M4O C;  4A3B C;  3K7A K;  4C45 A;  2WB1 L;  1R9T K;  1J98 A;  3N0B A;  2E2I K;  1TWG A;  4BBS C;  4BY7 K;  3H0G A;  5FLM C;  3S1N K;  4GT9 A;  4GTB A;  2NVX K;  5M5Y K;  3G4A A;  3GTO C;  1YNJ A;  1TWH A;  2B63 K;  3I4M C;  2WAQ L;  1EFW A;  1BGW A;  2FQT A;  5FJ8 K;  3HOU C;  2V6S A;  2JA7 A;  4LR2 A;  3NUH A;  4A3C K;  5HL8 A;  3FKI A;  1PJ7 A;  4O2D A;  3T00 A;  2R93 C;  1R9T A;  3RZD C;  3S15 K;  1HQM A;  4ILD A;  1YCL A;  5IP9 C;  1SFO A;  2ZUE A; 
#chains in the Genus database with same CATH homology
 1DCP A;  1USO A;  2V6U A;  1USM A;  4WIL A;  4C45 A;  2EBB A;  4LOW A;  1DCO A;  2V6S A;  1F93 A;  1RU0 A;  2V6T A;  3JST A;  3HXA A;  1DCH A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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