3JSTA

Crystal structure of transcriptional coactivator/pterin dehydratase from brucella melitensis
Total Genus 29
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
29
sequence length
97
structure length
97
Chain Sequence
MARNRLTESEMNEALRALDGWQKVDGREAITRSFKFKDFSTAFGFMAQAALYAEKLDHHPEWFNAYNRVDVTLATHSENGVTELDIKMARKMNAIAG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Crystal structure of transcriptional coactivator/pterin dehydratase from Brucella Melitensis
rcsb
source organism Brucella melitensis
molecule tags Lyase
molecule keywords Putative pterin-4-alpha-carbinolamine dehydratase
total genus 29
structure length 97
sequence length 97
chains with identical sequence B
ec nomenclature ec 4.2.1.96: 4a-hydroxytetrahydrobiopterin dehydratase.
pdb deposition date 2009-09-10

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01329 Pterin_4a Pterin 4 alpha carbinolamine dehydratase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.1360.20 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 Transcriptional coactivator/pterin dehydratase 3jstA00
1F93A 3HXAA 1USMA 2EBBA 2V6TA 1DCOA 1USOA 4C45A 2V6UA 4LOWA 2V6SA 1DCHA 4WILA 1RU0A 1DCPA 3JSTA
chains in the Genus database with same CATH superfamily
1BDFA 3G4CA 4AYBD 4A3IK 4GTBA 1YNJA 3VA7A 3M4OK 5M5XK 3S17C 4A93K 4C3IK 4G0UA 1Y1VA 3LPXA 4A3CC 2GSOA 4P5AA 2NVYC 3TFJA 3T01A 5C3EC 3S1QK 2VUMK 4Q4ZA 2R92C 2CFAB 3S1MC 1J6WA 1EH1A 5IP9C 2R93K 3S14K 2JA7K 1I3QK 4C2MK 4X6AC 4O2DA 3CQZC 3GTGK 5HL8A 1G51A 4Y52K 5IYDK 1I50A 1PJ7A 5M3FK 4OIOA 1R9TK 1GE9A 1TWAK 3A8IA 4Y7NK 1XZQB 3H0GC 4KN7A 5IYBC 3V4GA 3QX3A 3GTLC 3M4OC 2CW0A 2XCOA 4AH6A 4GTFA 3HOWC 4LJZA 3AD7C 1ZBSA 1TWFA 4P9SA 4OIRA 3GTMK 1TWHA 2WB1D 4PABA 2ZUEA 2E2JK 4BY7K 3CQZK 3GTPK 3DXJA 1IL2A 1YNNA 4BLBA 1Y1VC 3I4MC 1K83C 2NVXC 1USOA 1TWGC 2D6FC 1TWCA 1INNA 3GDZA 3Q3QA 1R9TC 2WAQL 4KMUA 1SFOK 3GTJC 2O5IA 2PHCB 3S1NK 3HKZD 2PPBA 2JA8C 4KB2A 2E2HA 5M3MK 2JA5C 2R7ZA 3S2DC 2Y0SL 3I4NK 1F93A 2W7VA 4BY1C 1F7UA 4GTCA 3HOVC 2PMZD 2GAGC 4KATA 3GTLA 3GTKA 1XPPA 3FOEA 3OEPA 4BBRK 1I3QA 1O26A 3I4MK 3RZOK 1EQRA 4QIWL 4KB4A 4GTEA 2YU9A 1ZXOA 3EQLA 5CJ9A 3GTKC 3S15C 3GTQA 2JA8K 3CAGA 4BLAA 4OIQA 4ILDA 1I50C 3AQOA 2PMZL 1IQ0A 1TWGA 3N3YA 1WOOA 2R7ZC 5IYCC 1WIHA 4C3HC 5IP7K 2XCRB 5C44C 1O2BA 4A3DK 2A69A 1O2FB 3SZZA 4KASA 1TWHK 4BBRC 4A3LK 5EGHA 1XZPA 3IPJA 1PJ6A 3RZDC 3T02A 5IOQA 3K7AK 4YFXA 4Y7NC 3H0GK 4KARA 4A3CK 5FLMC 2NVQC 3WODA 2EBBA 1X31C 1JOEA 4GZYA 3BUEA 2VUMC 3HOYC 2PA8D 4A3KC 2YU9C 2GAHC 3AH5A 4G7OA 4X6AK 4XSXA 3HOUC 2WB1L 5C4JC 5TMCA 3H3VD 1WOPA 2JA7A 4P5BA 1ZYRA 1L0WA 4G0WA 4XLPA 3LAPA 4J3NA 5TMFA 2FQOA 4LR2A 1USMA 5JVOA 1O2AA 5IYBK 3GEIA 5C4XC 3K7AC 2FQTA 3GTLK 3PO2K 3FKIC 4GTAA 5FLMK 4A3JC 3GIRA 2E2IA 3HOWK 3AD9C 5CHPA 1F9NA 5FJ8K 3GTJA 3GTOK 1WCMA 2JA6A 4BBSC 3GTQK 1YX2A 3FKIA 3L4JA 4BY1K 2JA5A 1EK8A 4GTLA 5D4DA 1Y1WK 5TJ3A 5L46A 3N0CA 4KDDA 4LK1A 4A3EK 4FZBA 2B63K 3S1RC 2RH6A 1TWGK 2A68A 2BE5A 4C3JK 4BXXC 2XCQA 1SFOC 4G7HA 3L4KA 1XZPB 4QJVA 4OINA 4A3MC 2NVYK 2NVTC 3GSIA 2PA8L 4AYBL 2JA7C 1O27A 1I50K 3S2HC 3H0GA 4C2MC 1IW7A 3JSTA 1B4BA 2R7ZK 1WQGA 1IS1A 1Y1WC 3HOVK 4C3HK 3HOZK 2ZUFA 1O29A 2O5JA 2A6HA 4A93C 4ZH4A 4A3GK 1VLOA 3TFHA 2WAQD 1O28A 3HXAA 4KM9A 2R92K 3S1MK 5E68A 1RU0A 1J98A 3BP3A 2YU9K 2CFAA 3S2HK 3GTGC 1VJEA 2JH3A 5IYCK 3M3YK 4Y52C 4XSZA 3GTPC 5C4JK 2R93A 1ZQ1C 1IE0A 2E2HK 5IYDC 1K83K 2E2IC 1JQWA 4QJVB 1AB4A 3HOZC 4A3LC 4JK1A 3GTGA 1WCMC 2JA6C 1Y1WA 1WSRA 2Y3PA 4KN4A 4LK0A 4KAWX 1EFWA 3N0BA 1VGXA 4QIWD 4LQYA 3A8JA 4KMDA 3S0XA 3MMLB 1VH2A 2NVQK 3AD8C 3GEHA 4C45A 3HOYK 1JVIA 3GTMC 1EI6A 4GTDA 1BJTA 3GTOC 3AQPA 4BY7C 4G7ZA 4DDQA 3GTQC 1I6HK 3M3YC 3TTGA 3GTMA 2Y0SD 1B4AA 2VUMA 1DD5A 1TWFC 3G4AA 3S17K 2P8TA 1O25A 4C3IC 1WCMK 2JA6K 3PO2C 1DCPA 3S15K 3S1QC 3HOXK 2JA5K 4A3BK 3SZYA 1TWCK 1SMYA 3PO3C 2NVXA 3TFIA 1IBAA 1DCHA 1BS2A 1VRQC 1SFOA 3I4NC 2A6EA 4OIPA 1R9TA 1HQMA 4GFQA 3T00A 4KC6A 2NVYA 4A3DC 3GTOA 4MEYA 4A3IC 5IORA 4C3JC 1PJ5A 1TWFK 1WQFA 1ZVUA 1YCLA 3RZDK 1J6XA 4WJ3M 4M1XA 2P5MA 3ADAC 2NVTK 5JFEA 5IP9K 2R93C 3HOXC 4KMAA 1I3QC 2KWAA 4A3BC 1TWAA 4PAAA 2RGRA 4YFKA 1WQHA 4WJ4A 1KQ4A 1WORA 2V6SA 3HOUK 1C0AA 5IP7C 1BGWA 5C44K 4XCHA 1Y1VK 2GSUA 4YFNA 4XLNA 4KM8A 3A8KA 5M5YK 3S16K 2E2IK 2V6TA 1XZQA 1UV7A 3GTJK 4A3GC 4A3FC 3LAJA 3H3VL 1XXAA 3FKIK 4A3JK 4A3KK 4NOIA 1WOSA 2ZFZA 4YG2A 1K83A 4Q5SA 2B63A 1XXCA 3OREA 1WSVA 2E2JC 4KMHA 3OPFA 1F7VA 1ISEA 5EGEA 2R92A 1V5VA 1O24A 2NVXK 4MEXA 1I6HC 4LLGA 4G0VA 1J6VA 4GT9A 1HI9A 4LOWA 3RZOC 2E2HC 4A3EC 4BKWA 2B63C 1DCOA 3S16C 3HKZL 3S1NC 4BXXK 4MQ9A 5C4XK 5IOSA 3NUHA 4RMFA 4A3FK 5C3EK 3GTKK 1I6VA 4A3MK 4WILA 3CQZA 3S14C 3S2DK 3GTPA 3FOFA 3FHZA 1TWCC 3PO3K 5IOTA 3ERED 4BBSK 5M5WK 3GEEA 2V6UA 3BP8C 1XXBA 2GSNA 1TWHC 3S1RK 4FM9A 1TWAC
chains in the Genus database with same CATH topology
1F93A 3HXAA 1USMA 2EBBA 2V6TA 1DCOA 1USOA 4C45A 2V6UA 4LOWA 2V6SA 1DCHA 4WILA 1RU0A 1DCPA 3JSTA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1F93 A;  3HXA A;  1USM A;  2EBB A;  2V6T A;  1DCO A;  1USO A;  4C45 A;  2V6U A;  4LOW A;  2V6S A;  1DCH A;  4WIL A;  1RU0 A;  1DCP A;  3JST A; 
#chains in the Genus database with same CATH topology
 1BDF A;  3G4C A;  4AYB D;  4A3I K;  4GTB A;  1YNJ A;  3VA7 A;  3M4O K;  5M5X K;  3S17 C;  4A93 K;  4C3I K;  4G0U A;  1Y1V A;  3LPX A;  4A3C C;  2GSO A;  4P5A A;  2NVY C;  3TFJ A;  3T01 A;  5C3E C;  3S1Q K;  2VUM K;  4Q4Z A;  2R92 C;  2CFA B;  3S1M C;  1J6W A;  1EH1 A;  5IP9 C;  2R93 K;  3S14 K;  2JA7 K;  1I3Q K;  4C2M K;  4X6A C;  4O2D A;  3CQZ C;  3GTG K;  5HL8 A;  1G51 A;  4Y52 K;  5IYD K;  1I50 A;  1PJ7 A;  5M3F K;  4OIO A;  1R9T K;  1GE9 A;  1TWA K;  3A8I A;  4Y7N K;  1XZQ B;  3H0G C;  4KN7 A;  5IYB C;  3V4G A;  3QX3 A;  3GTL C;  3M4O C;  2CW0 A;  2XCO A;  4AH6 A;  4GTF A;  3HOW C;  4LJZ A;  3AD7 C;  1ZBS A;  1TWF A;  4P9S A;  4OIR A;  3GTM K;  1TWH A;  2WB1 D;  4PAB A;  2ZUE A;  2E2J K;  4BY7 K;  3CQZ K;  3GTP K;  3DXJ A;  1IL2 A;  1YNN A;  4BLB A;  1Y1V C;  3I4M C;  1K83 C;  2NVX C;  1USO A;  1TWG C;  2D6F C;  1TWC A;  1INN A;  3GDZ A;  3Q3Q A;  1R9T C;  2WAQ L;  4KMU A;  1SFO K;  3GTJ C;  2O5I A;  2PHC B;  3S1N K;  3HKZ D;  2PPB A;  2JA8 C;  4KB2 A;  2E2H A;  5M3M K;  2JA5 C;  2R7Z A;  3S2D C;  2Y0S L;  3I4N K;  1F93 A;  2W7V A;  4BY1 C;  1F7U A;  4GTC A;  3HOV C;  2PMZ D;  2GAG C;  4KAT A;  3GTL A;  3GTK A;  1XPP A;  3FOE A;  3OEP A;  4BBR K;  1I3Q A;  1O26 A;  3I4M K;  3RZO K;  1EQR A;  4QIW L;  4KB4 A;  4GTE A;  2YU9 A;  1ZXO A;  3EQL A;  5CJ9 A;  3GTK C;  3S15 C;  3GTQ A;  2JA8 K;  3CAG A;  4BLA A;  4OIQ A;  4ILD A;  1I50 C;  3AQO A;  2PMZ L;  1IQ0 A;  1TWG A;  3N3Y A;  1WOO A;  2R7Z C;  5IYC C;  1WIH A;  4C3H C;  5IP7 K;  2XCR B;  5C44 C;  1O2B A;  4A3D K;  2A69 A;  1O2F B;  3SZZ A;  4KAS A;  1TWH K;  4BBR C;  4A3L K;  5EGH A;  1XZP A;  3IPJ A;  1PJ6 A;  3RZD C;  3T02 A;  5IOQ A;  3K7A K;  4YFX A;  4Y7N C;  3H0G K;  4KAR A;  4A3C K;  5FLM C;  2NVQ C;  3WOD A;  2EBB A;  1X31 C;  1JOE A;  4GZY A;  3BUE A;  2VUM C;  3HOY C;  2PA8 D;  4A3K C;  2YU9 C;  2GAH C;  3AH5 A;  4G7O A;  4X6A K;  4XSX A;  3HOU C;  2WB1 L;  5C4J C;  5TMC A;  3H3V D;  1WOP A;  2JA7 A;  4P5B A;  1ZYR A;  1L0W A;  4G0W A;  4XLP A;  3LAP A;  4J3N A;  5TMF A;  2FQO A;  4LR2 A;  1USM A;  5JVO A;  1O2A A;  5IYB K;  3GEI A;  5C4X C;  3K7A C;  2FQT A;  3GTL K;  3PO2 K;  3FKI C;  4GTA A;  5FLM K;  4A3J C;  3GIR A;  2E2I A;  3HOW K;  3AD9 C;  5CHP A;  1F9N A;  5FJ8 K;  3GTJ A;  3GTO K;  1WCM A;  2JA6 A;  4BBS C;  3GTQ K;  1YX2 A;  3FKI A;  3L4J A;  4BY1 K;  2JA5 A;  1EK8 A;  4GTL A;  5D4D A;  1Y1W K;  5TJ3 A;  5L46 A;  3N0C A;  4KDD A;  4LK1 A;  4A3E K;  4FZB A;  2B63 K;  3S1R C;  2RH6 A;  1TWG K;  2A68 A;  2BE5 A;  4C3J K;  4BXX C;  2XCQ A;  1SFO C;  4G7H A;  3L4K A;  1XZP B;  4QJV A;  4OIN A;  4A3M C;  2NVY K;  2NVT C;  3GSI A;  2PA8 L;  4AYB L;  2JA7 C;  1O27 A;  1I50 K;  3S2H C;  3H0G A;  4C2M C;  1IW7 A;  3JST A;  1B4B A;  2R7Z K;  1WQG A;  1IS1 A;  1Y1W C;  3HOV K;  4C3H K;  3HOZ K;  2ZUF A;  1O29 A;  2O5J A;  2A6H A;  4A93 C;  4ZH4 A;  4A3G K;  1VLO A;  3TFH A;  2WAQ D;  1O28 A;  3HXA A;  4KM9 A;  2R92 K;  3S1M K;  5E68 A;  1RU0 A;  1J98 A;  3BP3 A;  2YU9 K;  2CFA A;  3S2H K;  3GTG C;  1VJE A;  2JH3 A;  5IYC K;  3M3Y K;  4Y52 C;  4XSZ A;  3GTP C;  5C4J K;  2R93 A;  1ZQ1 C;  1IE0 A;  2E2H K;  5IYD C;  1K83 K;  2E2I C;  1JQW A;  4QJV B;  1AB4 A;  3HOZ C;  4A3L C;  4JK1 A;  3GTG A;  1WCM C;  2JA6 C;  1Y1W A;  1WSR A;  2Y3P A;  4KN4 A;  4LK0 A;  4KAW X;  1EFW A;  3N0B A;  1VGX A;  4QIW D;  4LQY A;  3A8J A;  4KMD A;  3S0X A;  3MML B;  1VH2 A;  2NVQ K;  3AD8 C;  3GEH A;  4C45 A;  3HOY K;  1JVI A;  3GTM C;  1EI6 A;  4GTD A;  1BJT A;  3GTO C;  3AQP A;  4BY7 C;  4G7Z A;  4DDQ A;  3GTQ C;  1I6H K;  3M3Y C;  3TTG A;  3GTM A;  2Y0S D;  1B4A A;  2VUM A;  1DD5 A;  1TWF C;  3G4A A;  3S17 K;  2P8T A;  1O25 A;  4C3I C;  1WCM K;  2JA6 K;  3PO2 C;  1DCP A;  3S15 K;  3S1Q C;  3HOX K;  2JA5 K;  4A3B K;  3SZY A;  1TWC K;  1SMY A;  3PO3 C;  2NVX A;  3TFI A;  1IBA A;  1DCH A;  1BS2 A;  1VRQ C;  1SFO A;  3I4N C;  2A6E A;  4OIP A;  1R9T A;  1HQM A;  4GFQ A;  3T00 A;  4KC6 A;  2NVY A;  4A3D C;  3GTO A;  4MEY A;  4A3I C;  5IOR A;  4C3J C;  1PJ5 A;  1TWF K;  1WQF A;  1ZVU A;  1YCL A;  3RZD K;  1J6X A;  4WJ3 M;  4M1X A;  2P5M A;  3ADA C;  2NVT K;  5JFE A;  5IP9 K;  2R93 C;  3HOX C;  4KMA A;  1I3Q C;  2KWA A;  4A3B C;  1TWA A;  4PAA A;  2RGR A;  4YFK A;  1WQH A;  4WJ4 A;  1KQ4 A;  1WOR A;  2V6S A;  3HOU K;  1C0A A;  5IP7 C;  1BGW A;  5C44 K;  4XCH A;  1Y1V K;  2GSU A;  4YFN A;  4XLN A;  4KM8 A;  3A8K A;  5M5Y K;  3S16 K;  2E2I K;  2V6T A;  1XZQ A;  1UV7 A;  3GTJ K;  4A3G C;  4A3F C;  3LAJ A;  3H3V L;  1XXA A;  3FKI K;  4A3J K;  4A3K K;  4NOI A;  1WOS A;  2ZFZ A;  4YG2 A;  1K83 A;  4Q5S A;  2B63 A;  1XXC A;  3ORE A;  1WSV A;  2E2J C;  4KMH A;  3OPF A;  1F7V A;  1ISE A;  5EGE A;  2R92 A;  1V5V A;  1O24 A;  2NVX K;  4MEX A;  1I6H C;  4LLG A;  4G0V A;  1J6V A;  4GT9 A;  1HI9 A;  4LOW A;  3RZO C;  2E2H C;  4A3E C;  4BKW A;  2B63 C;  1DCO A;  3S16 C;  3HKZ L;  3S1N C;  4BXX K;  4MQ9 A;  5C4X K;  5IOS A;  3NUH A;  4RMF A;  4A3F K;  5C3E K;  3GTK K;  1I6V A;  4A3M K;  4WIL A;  3CQZ A;  3S14 C;  3S2D K;  3GTP A;  3FOF A;  3FHZ A;  1TWC C;  3PO3 K;  5IOT A;  3ERE D;  4BBS K;  5M5W K;  3GEE A;  2V6U A;  3BP8 C;  1XXB A;  2GSN A;  1TWH C;  3S1R K;  4FM9 A;  1TWA C; 
#chains in the Genus database with same CATH homology
 1F93 A;  3HXA A;  1USM A;  2EBB A;  2V6T A;  1DCO A;  1USO A;  4C45 A;  2V6U A;  4LOW A;  2V6S A;  1DCH A;  4WIL A;  1RU0 A;  1DCP A;  3JST A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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