3JSTA

Crystal structure of transcriptional coactivator/pterin dehydratase from brucella melitensis
Total Genus 29
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
29
sequence length
97
structure length
97
Chain Sequence
MARNRLTESEMNEALRALDGWQKVDGREAITRSFKFKDFSTAFGFMAQAALYAEKLDHHPEWFNAYNRVDVTLATHSENGVTELDIKMARKMNAIAG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Lyase
molecule keywords Putative pterin-4-alpha-carbinolamine dehydratase
publication title Crystal structure of transcriptional coactivator/pterin dehydratase from Brucella Melitensis
rcsb
source organism Brucella melitensis
total genus 29
structure length 97
sequence length 97
chains with identical sequence B
ec nomenclature ec 4.2.1.96: 4a-hydroxytetrahydrobiopterin dehydratase.
pdb deposition date 2009-09-10

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01329 Pterin_4a Pterin 4 alpha carbinolamine dehydratase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.1360.20 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 Transcriptional coactivator/pterin dehydratase 3jstA00
1DCPA 1F93A 2EBBA 3HXAA 4C45A 2V6SA 1DCOA 2V6TA 1USOA 4LOWA 3JSTA 1USMA 1RU0A 1DCHA 4WILA 2V6UA
chains in the Genus database with same CATH superfamily
3AD7C 4A3BK 2Y3PA 3GTOK 2B63C 4G0UA 5TJ3A 1HQMA 2KWAA 1EQRA 2E2IC 2NVXA 4BY1C 4C3JC 5C3EC 4KM8A 4WJ4A 3A8IA 4BBSC 1Y1WK 3GTJA 2R7ZC 1IW7A 4PAAA 3FKIA 2GAHC 3TFIA 3GTMA 2PMZL 4Q5SA 1X31C 1ZVUA 2GSOA 3TTGA 4A3FK 5FLMK 4KB4A 1F7UA 3VA7A 1I50C 4GTFA 3WODA 3CAGA 3PO3K 3SZZA 3GTJK 4A3IK 4C45A 2E2IA 3FKIK 4XCHA 3GTMK 4KMDA 4A3JC 2NVQC 1XZPA 2W7VA 3H3VL 5IYBK 2RH6A 4BBRC 4Q4ZA 4LR2A 1O2AA 5C4XC 4A3DK 1J6VA 5C4JK 5IYCC 3S1QK 3GEHA 4GTEA 4KM9A 2R93C 4X6AK 4GTAA 4KC6A 3I4NC 2E2IK 4C3JK 5C3EK 1I50A 4KMAA 3S16C 1TWHC 1O2FB 3GTGK 4RMFA 1WSVA 2PHCB 4GT9A 3AD9C 4QJVB 4O2DA 3GDZA 3GTLA 2WAQD 4Y52C 4P5AA 3G4CA 1O25A 4FZBA 3S2HK 1XXCA 1B4AA 4BKWA 1VGXA 3K7AK 3BP3A 1I50K 3HXAA 2E2HC 2WB1D 4BY7C 1WCMC 3ERED 1EI6A 3S1MK 5M3FK 3RZOC 3GTLK 1TWFC 4C3IK 3GIRA 1PJ7A 2V6UA 4A3GC 3H0GC 5TMFA 5C4XK 3HOXC 1XXAA 3HOYK 3GTPC 5IP9K 1TWAC 5IYCK 3GTKA 4MEXA 3BP8C 1ZXOA 4KAWX 4C3HC 4OIQA 3QX3A 1K83A 3DXJA 4GTDA 2E2HA 3RZDK 1JOEA 1WCMA 3FHZA 3HOVC 4KDDA 3HOZC 3S14C 4A3KC 2PMZD 2D6FC 3I4MK 3HKZD 2XCRB 3LAJA 4XLPA 4G7OA 2A68A 1SFOC 3PO2K 4P9SA 3GTKK 2JA7A 4KN4A 4PABA 4YFXA 1IBAA 2JH3A 5L46A 1IE0A 1TWCC 1TWAA 3OEPA 3S17C 1K83K 2E2HK 1O26A 1J98A 4BY7K 3GEEA 3H3VD 2GSUA 1O29A 4OINA 5JFEA 1YX2A 5EGEA 4GZYA 1TWGK 5IYDC 2JA7K 3HOXK 5C44K 5IORA 2JA5A 4A93K 1VRQC 1SFOA 1DCHA 1TWAK 1F9NA 4GFQA 1JQWA 4GTBA 4XSXA 3S1NC 5HL8A 5IOSA 2NVXK 4A3CC 1Y1VC 3M3YK 2B63A 4C2MK 2R92C 1WIHA 2O5JA 2XCOA 1DCPA 4WJ3M 4OIOA 3S1RC 3S15K 2JA8C 1L0WA 2JA5K 3MMLB 1AB4A 1BS2A 1SFOK 2R7ZA 2CW0A 4YG2A 4BXXC 1F7VA 1I6HC 3NUHA 2ZUEA 4KASA 1USOA 2B63K 2FQTA 1B4BA 2E2JC 4A3MC 3LAPA 4A3LC 3OREA 4OIPA 4BY1K 1Y1VA 2GSNA 3HOUC 5IP7C 2R92A 4BBSK 2O5IA 2V6SA 2R7ZK 2A6HA 2A69A 2EBBA 2JA6C 3S2DC 2ZFZA 5FJ8K 4AYBD 3GTQC 1IL2A 1INNA 3M4OC 1Y1VK 2A6EA 1PJ6A 1VLOA 2R92K 2R93A 1YNNA 1IS1A 2YU9C 1WOSA 3S1RK 2JA8K 2Y0SL 4LJZA 1TWHA 4A3JK 2NVQK 4BBRK 5IOTA 3CQZC 2CFAB 4LLGA 4GTLA 2ZUFA 1EH1A 2PA8L 5CJ9A 2JA6A 4A3BC 4BLBA 3T01A 3FOEA 3GTOC 2R93K 4A3LK 4DDQA 3G4AA 3T02A 3I4NK 4M1XA 3N0BA 4QJVA 2NVTC 3S16K 1TWHK 5IOQA 1C0AA 1WQGA 1F93A 5EGHA 1WOPA 5M5YK 5M3MK 1SMYA 1I3QC 1TWFA 2JA6K 4Y52K 4JK1A 2P8TA 3CQZA 3S2DK 3H0GA 2WAQL 4KARA 3GTPA 1GE9A 3GTOA 2CFAA 4YFNA 4P5BA 1WCMK 1XZQB 2NVYC 3PO3C 1XXBA 3GTJC 3FKIC 3RZOK 1TWFK 4G7HA 3AQPA 4BLAA 2PPBA 3CQZK 4A3GK 4QIWL 3H0GK 3GSIA 1I3QA 1DCOA 4A3DC 1WSRA 1USMA 3AQOA 1J6WA 4GTCA 3GTPK 1UV7A 5D4DA 2XCQA 5TMCA 1XZPB 3TFHA 5C4JC 3S1QC 4LK1A 4X6AC 2BE5A 4LQYA 1WOOA 4C3HK 1TWCA 3IPJA 4Y7NC 2NVTK 1IQ0A 3HOVK 2NVYA 3GTGC 3ADAC 3HOZK 3S14K 4A3KK 4KATA 1YNJA 1WQHA 1I3QK 1KQ4A 4G7ZA 1O27A 3HKZL 1XZQA 2FQOA 4OIRA 3GEIA 1R9TC 4ZH4A 3S2HC 1VJEA 3BUEA 1TWCK 3S17K 3K7AC 1ZBSA 1ISEA 3OPFA 4G0WA 2Y0SD 4KB2A 2NVYK 1BJTA 2GAGC 4NOIA 4MEYA 3S0XA 1G51A 3S1MC 3GTGA 3GTLC 4AH6A 3HOWC 2PA8D 3JSTA 1BDFA 3LPXA 4C3IC 4ILDA 4YFKA 5IYDK 4G0VA 3FOFA 1BGWA 3HOYC 3S1NK 5IP9C 1V5VA 1J6XA 1R9TA 3EQLA 3SZYA 1WQFA 4XLNA 1HI9A 5CHPA 3L4JA 1I6VA 4Y7NK 4A3CK 3AH5A 1WORA 3RZDC 1O24A 4MQ9A 3AD8C 3I4MC 1RU0A 3V4GA 3TFJA 4KN7A 1O28A 3PO2C 1JVIA 3GTKC 3Q3QA 4A3EC 1R9TK 2VUMC 5M5XK 4BXXK 1I6HK 4KMUA 3T00A 2E2JK 1K83C 4A3MK 3GTQA 1PJ5A 3N0CA 4QIWD 5M5WK 3HOUK 4FM9A 5IP7K 1VH2A 1DD5A 3HOWK 2YU9A 1Y1WC 1TWGC 4WILA 4J3NA 2JA7C 5C44C 1XPPA 4A93C 2V6TA 4LK0A 2VUMA 3GTQK 5JVOA 1EFWA 3A8KA 4KMHA 2RGRA 4A3FC 3M4OK 5FLMC 3L4KA 1EK8A 2NVXC 3N3YA 5E68A 4AYBL 3M3YC 4C2MC 2YU9K 2P5MA 3A8JA 4LOWA 4A3IC 1ZQ1C 3S15C 2WB1L 3GTMC 2JA5C 1Y1WA 1TWGA 5IYBC 1ZYRA 4A3EK 4XSZA 1O2BA 1YCLA 2VUMK
chains in the Genus database with same CATH topology
1DCPA 1F93A 2EBBA 3HXAA 4C45A 2V6SA 1DCOA 2V6TA 1USOA 4LOWA 3JSTA 1USMA 1RU0A 1DCHA 4WILA 2V6UA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1DCP A;  1F93 A;  2EBB A;  3HXA A;  4C45 A;  2V6S A;  1DCO A;  2V6T A;  1USO A;  4LOW A;  3JST A;  1USM A;  1RU0 A;  1DCH A;  4WIL A;  2V6U A; 
#chains in the Genus database with same CATH topology
 3AD7 C;  4A3B K;  2Y3P A;  3GTO K;  2B63 C;  4G0U A;  5TJ3 A;  1HQM A;  2KWA A;  1EQR A;  2E2I C;  2NVX A;  4BY1 C;  4C3J C;  5C3E C;  4KM8 A;  4WJ4 A;  3A8I A;  4BBS C;  1Y1W K;  3GTJ A;  2R7Z C;  1IW7 A;  4PAA A;  3FKI A;  2GAH C;  3TFI A;  3GTM A;  2PMZ L;  4Q5S A;  1X31 C;  1ZVU A;  2GSO A;  3TTG A;  4A3F K;  5FLM K;  4KB4 A;  1F7U A;  3VA7 A;  1I50 C;  4GTF A;  3WOD A;  3CAG A;  3PO3 K;  3SZZ A;  3GTJ K;  4A3I K;  4C45 A;  2E2I A;  3FKI K;  4XCH A;  3GTM K;  4KMD A;  4A3J C;  2NVQ C;  1XZP A;  2W7V A;  3H3V L;  5IYB K;  2RH6 A;  4BBR C;  4Q4Z A;  4LR2 A;  1O2A A;  5C4X C;  4A3D K;  1J6V A;  5C4J K;  5IYC C;  3S1Q K;  3GEH A;  4GTE A;  4KM9 A;  2R93 C;  4X6A K;  4GTA A;  4KC6 A;  3I4N C;  2E2I K;  4C3J K;  5C3E K;  1I50 A;  4KMA A;  3S16 C;  1TWH C;  1O2F B;  3GTG K;  4RMF A;  1WSV A;  2PHC B;  4GT9 A;  3AD9 C;  4QJV B;  4O2D A;  3GDZ A;  3GTL A;  2WAQ D;  4Y52 C;  4P5A A;  3G4C A;  1O25 A;  4FZB A;  3S2H K;  1XXC A;  1B4A A;  4BKW A;  1VGX A;  3K7A K;  3BP3 A;  1I50 K;  3HXA A;  2E2H C;  2WB1 D;  4BY7 C;  1WCM C;  3ERE D;  1EI6 A;  3S1M K;  5M3F K;  3RZO C;  3GTL K;  1TWF C;  4C3I K;  3GIR A;  1PJ7 A;  2V6U A;  4A3G C;  3H0G C;  5TMF A;  5C4X K;  3HOX C;  1XXA A;  3HOY K;  3GTP C;  5IP9 K;  1TWA C;  5IYC K;  3GTK A;  4MEX A;  3BP8 C;  1ZXO A;  4KAW X;  4C3H C;  4OIQ A;  3QX3 A;  1K83 A;  3DXJ A;  4GTD A;  2E2H A;  3RZD K;  1JOE A;  1WCM A;  3FHZ A;  3HOV C;  4KDD A;  3HOZ C;  3S14 C;  4A3K C;  2PMZ D;  2D6F C;  3I4M K;  3HKZ D;  2XCR B;  3LAJ A;  4XLP A;  4G7O A;  2A68 A;  1SFO C;  3PO2 K;  4P9S A;  3GTK K;  2JA7 A;  4KN4 A;  4PAB A;  4YFX A;  1IBA A;  2JH3 A;  5L46 A;  1IE0 A;  1TWC C;  1TWA A;  3OEP A;  3S17 C;  1K83 K;  2E2H K;  1O26 A;  1J98 A;  4BY7 K;  3GEE A;  3H3V D;  2GSU A;  1O29 A;  4OIN A;  5JFE A;  1YX2 A;  5EGE A;  4GZY A;  1TWG K;  5IYD C;  2JA7 K;  3HOX K;  5C44 K;  5IOR A;  2JA5 A;  4A93 K;  1VRQ C;  1SFO A;  1DCH A;  1TWA K;  1F9N A;  4GFQ A;  1JQW A;  4GTB A;  4XSX A;  3S1N C;  5HL8 A;  5IOS A;  2NVX K;  4A3C C;  1Y1V C;  3M3Y K;  2B63 A;  4C2M K;  2R92 C;  1WIH A;  2O5J A;  2XCO A;  1DCP A;  4WJ3 M;  4OIO A;  3S1R C;  3S15 K;  2JA8 C;  1L0W A;  2JA5 K;  3MML B;  1AB4 A;  1BS2 A;  1SFO K;  2R7Z A;  2CW0 A;  4YG2 A;  4BXX C;  1F7V A;  1I6H C;  3NUH A;  2ZUE A;  4KAS A;  1USO A;  2B63 K;  2FQT A;  1B4B A;  2E2J C;  4A3M C;  3LAP A;  4A3L C;  3ORE A;  4OIP A;  4BY1 K;  1Y1V A;  2GSN A;  3HOU C;  5IP7 C;  2R92 A;  4BBS K;  2O5I A;  2V6S A;  2R7Z K;  2A6H A;  2A69 A;  2EBB A;  2JA6 C;  3S2D C;  2ZFZ A;  5FJ8 K;  4AYB D;  3GTQ C;  1IL2 A;  1INN A;  3M4O C;  1Y1V K;  2A6E A;  1PJ6 A;  1VLO A;  2R92 K;  2R93 A;  1YNN A;  1IS1 A;  2YU9 C;  1WOS A;  3S1R K;  2JA8 K;  2Y0S L;  4LJZ A;  1TWH A;  4A3J K;  2NVQ K;  4BBR K;  5IOT A;  3CQZ C;  2CFA B;  4LLG A;  4GTL A;  2ZUF A;  1EH1 A;  2PA8 L;  5CJ9 A;  2JA6 A;  4A3B C;  4BLB A;  3T01 A;  3FOE A;  3GTO C;  2R93 K;  4A3L K;  4DDQ A;  3G4A A;  3T02 A;  3I4N K;  4M1X A;  3N0B A;  4QJV A;  2NVT C;  3S16 K;  1TWH K;  5IOQ A;  1C0A A;  1WQG A;  1F93 A;  5EGH A;  1WOP A;  5M5Y K;  5M3M K;  1SMY A;  1I3Q C;  1TWF A;  2JA6 K;  4Y52 K;  4JK1 A;  2P8T A;  3CQZ A;  3S2D K;  3H0G A;  2WAQ L;  4KAR A;  3GTP A;  1GE9 A;  3GTO A;  2CFA A;  4YFN A;  4P5B A;  1WCM K;  1XZQ B;  2NVY C;  3PO3 C;  1XXB A;  3GTJ C;  3FKI C;  3RZO K;  1TWF K;  4G7H A;  3AQP A;  4BLA A;  2PPB A;  3CQZ K;  4A3G K;  4QIW L;  3H0G K;  3GSI A;  1I3Q A;  1DCO A;  4A3D C;  1WSR A;  1USM A;  3AQO A;  1J6W A;  4GTC A;  3GTP K;  1UV7 A;  5D4D A;  2XCQ A;  5TMC A;  1XZP B;  3TFH A;  5C4J C;  3S1Q C;  4LK1 A;  4X6A C;  2BE5 A;  4LQY A;  1WOO A;  4C3H K;  1TWC A;  3IPJ A;  4Y7N C;  2NVT K;  1IQ0 A;  3HOV K;  2NVY A;  3GTG C;  3ADA C;  3HOZ K;  3S14 K;  4A3K K;  4KAT A;  1YNJ A;  1WQH A;  1I3Q K;  1KQ4 A;  4G7Z A;  1O27 A;  3HKZ L;  1XZQ A;  2FQO A;  4OIR A;  3GEI A;  1R9T C;  4ZH4 A;  3S2H C;  1VJE A;  3BUE A;  1TWC K;  3S17 K;  3K7A C;  1ZBS A;  1ISE A;  3OPF A;  4G0W A;  2Y0S D;  4KB2 A;  2NVY K;  1BJT A;  2GAG C;  4NOI A;  4MEY A;  3S0X A;  1G51 A;  3S1M C;  3GTG A;  3GTL C;  4AH6 A;  3HOW C;  2PA8 D;  3JST A;  1BDF A;  3LPX A;  4C3I C;  4ILD A;  4YFK A;  5IYD K;  4G0V A;  3FOF A;  1BGW A;  3HOY C;  3S1N K;  5IP9 C;  1V5V A;  1J6X A;  1R9T A;  3EQL A;  3SZY A;  1WQF A;  4XLN A;  1HI9 A;  5CHP A;  3L4J A;  1I6V A;  4Y7N K;  4A3C K;  3AH5 A;  1WOR A;  3RZD C;  1O24 A;  4MQ9 A;  3AD8 C;  3I4M C;  1RU0 A;  3V4G A;  3TFJ A;  4KN7 A;  1O28 A;  3PO2 C;  1JVI A;  3GTK C;  3Q3Q A;  4A3E C;  1R9T K;  2VUM C;  5M5X K;  4BXX K;  1I6H K;  4KMU A;  3T00 A;  2E2J K;  1K83 C;  4A3M K;  3GTQ A;  1PJ5 A;  3N0C A;  4QIW D;  5M5W K;  3HOU K;  4FM9 A;  5IP7 K;  1VH2 A;  1DD5 A;  3HOW K;  2YU9 A;  1Y1W C;  1TWG C;  4WIL A;  4J3N A;  2JA7 C;  5C44 C;  1XPP A;  4A93 C;  2V6T A;  4LK0 A;  2VUM A;  3GTQ K;  5JVO A;  1EFW A;  3A8K A;  4KMH A;  2RGR A;  4A3F C;  3M4O K;  5FLM C;  3L4K A;  1EK8 A;  2NVX C;  3N3Y A;  5E68 A;  4AYB L;  3M3Y C;  4C2M C;  2YU9 K;  2P5M A;  3A8J A;  4LOW A;  4A3I C;  1ZQ1 C;  3S15 C;  2WB1 L;  3GTM C;  2JA5 C;  1Y1W A;  1TWG A;  5IYB C;  1ZYR A;  4A3E K;  4XSZ A;  1O2B A;  1YCL A;  2VUM K; 
#chains in the Genus database with same CATH homology
 1DCP A;  1F93 A;  2EBB A;  3HXA A;  4C45 A;  2V6S A;  1DCO A;  2V6T A;  1USO A;  4LOW A;  3JST A;  1USM A;  1RU0 A;  1DCH A;  4WIL A;  2V6U A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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