3S15C

Rna polymerase ii initiation complex with a 7-nt rna
Total Genus 60
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
60
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Initiation complex structure and promoter proofreading.
pubmed doi rcsb
molecule tags Transcription/rna/dna
total genus 60
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-05-14

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3s15C02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3s15C01
5TMFA 4XLNA 3CQZC 2B63C 1XPPA 3GTGK 1I6HC 3M3YC 1I3QC 5C44K 5FLMK 3GTPK 2R93C 5M5WK 1Y1VC 4BBSC 4G7ZA 3RZOC 4JK1A 4A3FC 4X6AC 3HOZK 3M4OK 4OIOA 5C4JK 2JA8K 5M3FK 4QJVA 4OINA 5IP9K 5M5XK 3HOVK 2WB1D 3S15C 3S2DC 3HOZC 5IYCK 2R7ZK 3GTOK 4KN7A 4YFNA 5C4JC 3HOYC 4C2MK 5IP7K 3I4NK 3GTQK 1IW7A 5C4XC 5IYBC 2WAQL 1BDFA 4C3IK 3HOWK 3PO3K 4A3LK 3S1QK 2A69A 2E2JK 2NVQC 4NOIA 4YFXA 2Y0SD 4A93C 4Y7NK 4A3MK 2B63K 3CQZK 4XSZA 4C3IC 3HOWC 1I3QK 3M3YK 4YG2A 3S1NK 1I6HK 2R93K 4A3JK 4BBSK 4A3DK 4MQ9A 3RZOK 4A3FK 4QJVB 3S1NC 3EQLA 4BBRC 4LLGA 4A3JC 1SFOC 3S14C 4A3DC 3S15K 3S2DK 4KN4A 3GTMC 4LK1A 3HOYK 2BE5A 3I4NC 4A3IC 3S1MK 2WB1L 2A68A 3FKIC 4YFKA 1TWAC 5C4XK 5IYBK 4Q5SA 4GZYA 1I50C 3H3VL 3H3VD 1TWFC 3PO2C 1R9TC 2E2IC 2PMZL 2NVQK 2PMZD 4A93K 3GTKK 2NVTC 1SMYA 4A3EC 1K83C 2PPBA 4OIPA 3RZDC 2JA5C 2Y0SL 2YU9C 3GTKC 2VUMC 4QIWD 4MEYA 4XLPA 5C3EC 4G7HA 3S17K 2NVYK 4BBRK 3S14K 3S1RK 1SFOK 2CW0A 2O5JA 3K7AK 3GTMK 2O5IA 3I4MC 2NVYC 4BY1C 4Y52C 3S17C 4A3IK 5TMCA 4ZH4A 3S1RC 3S2HC 1TWAK 2A6HA 3FKIK 1HQMA 3K7AC 1I50K 3PO2K 1TWFK 1WCMC 1R9TK 2E2IK 4BY7K 3HKZL 3HKZD 2JA6C 1I6VA 2E2HC 2NVTK 5M3MK 4A3EK 4A3BC 1K83K 3H0GK 3RZDK 4BY7C 2JA5K 5IYDC 3GTJC 3WODA 2YU9K 2VUMK 2JA7C 4A3GC 4A3CC 3H0GC 5C3EK 4A3KC 3GTLC 1TWCK 3HOXC 5D4DA 1TWHC 3S16C 2R92C 3HOUC 4QIWL 4XSXA 4OIRA 4Q4ZA 4C3JC 3I4MK 1TWCC 3S1MC 1TWGK 4C3HC 4LJZA 2NVXC 4BY1K 3S2HK 4Y52K 5M5YK 3GTGC 4KMUA 5C44C 5FLMC 3GTPC 1WCMK 1TWGC 4A3MC 2A6EA 2E2HK 2JA6K 3M4OC 4AYBL 4AYBD 4A3BK 3DXJA 2JA8C 1YNNA 5IP9C 1Y1WK 3HOVC 5IYCC 1ZYRA 4MEXA 3GTJK 5IYDK 2R7ZC 2JA7K 2WAQD 3GTOC 4A3GK 4A3CK 4C2MC 5IP7C 3GTQC 4A3KK 4LK0A 1Y1WC 3GTLK 3HOXK 2PA8L 4BXXK 2PA8D 1TWHK 1YNJA 2R92K 3S16K 3HOUK 4OIQA 3PO3C 4G7OA 4A3LC 4C3JK 3S1QC 4BXXC 2E2JC 1Y1VK 5FJ8K 4Y7NC 4C3HK 2NVXK 4X6AK
chains in the Genus database with same CATH superfamily
4XLNA 5CJ9A 1IL2A 1I6HC 5C44K 1J6WA 2R93C 1XZQB 5M3FK 3S15C 1O2AA 2R7ZK 4GTFA 3HOYC 4C2MK 3G4AA 1XZPB 1IW7A 5C4XC 5IYBC 4IOCS 1O26A 4GTCA 3PO3K 3GTJA 2E2JK 4KMDA 4Y7NK 3A8KA 2B63K 3CQZK 3SZYA 1ISEA 1I3QK 3GTLA 4WFNS 1TWHA 4KB4A 3FOEA 4MQ9A 4A3FK 3IPJA 4P5BA 4KARA 1TWCA 2NVXA 4BBRC 5CHPA 3S2DK 4WJ4A 3ADAC 3L4JA 3GTPA 4KMHA 2BE5A 4P5AA 4A3IC 3T02A 3FKIC 3AD7C 1TWAC 3AQOA 5JVOA 3H3VD 3PO2C 4A93K 2PMZD 1EFWA 2PHCB 1JVIA 3V4GA 4A3EC 2XCRB 2PPBA 3RZDC 4PABA 3GEIA 2YU9C 3CAGA 4MEYA 4G7HA 3S17K 2NVYK 1SFOK 2ZJQS 4WJ3M 3K7AK 3GTMK 2ZUEA 1WQHA 3I4MC 3S17C 2NVYC 3Q3QA 3S2HC 1HQMA 3K7AC 4KDDA 1I50K 4DDQA 4BLBA 2E2IK 4BY7K 2JA6C 4KB2A 1K83K 3H0GK 4BY7C 1PJ7A 4AH6A 2JA7C 3TFHA 1ZXOA 3H0GC 5IOTA 1O27A 5D4DA 2JH3A 1XXAA 4OIRA 3S1MC 1TWGK 3A8IA 3FHZA 4WCES 5FLMC 1WCMK 1ZQ1C 1TWGC 1BJTA 2GSUA 3OEPA 2ZFZA 4A3BK 1YNNA 1XZQA 4GTAA 5IYDK 3L4KA 2WAQD 3GTOC 1YCLA 3N3YA 1TWFA 4A3GK 3GTQC 3VA7A 4A3KK 4LOWA 4LR2A 3S16K 1YNJA 1XZPA 4OIQA 4G7OA 4C3JK 1Y1VK 4G0UA 4A3MC 2VUMA 1XPPA 3LAPA 3GTGK 3M3YC 3A8JA 1IE0A 1Y1VC 1WOOA 4BBSC 1WSRA 4JK1A 3HOZK 3M4OK 4OIOA 1F9NA 3HXAA 5IP9K 3HOVK 5IYCK 3HOZC 4KN7A 4YFNA 1O25A 2KQ1A 1EQRA 2E2HA 1USOA 3MMLB 2WAQL 1JOEA 1BDFA 1BS2A 1WQGA 2NVQC 2EBBA 4YFXA 5L46A 1WSVA 4XSZA 1I6HK 5E68A 2R93K 2R92A 1V5VA 3GEHA 3AD8C 1VJEA 1EH1A 1F7VA 1WOPA 3S14C 3S15K 4KN4A 3OPFA 4P9SA 3HOYK 4RMFA 3I4NC 3AD9C 1XXBA 5C4XK 5IYBK 2V6UA 3T01A 1R9TC 3PIPS 2R7ZA 2NVTC 1SMYA 1Y1WA 2JA5C 2GAGC 4O2DA 1AB4A 4XLPA 5C3EC 4BBRK 2B63A 1O29A 3CQZA 3GDZA 4G0WA 1I3QA 2V6TA 2O5IA 4A3IK 4KATA 3FOFA 3FKIK 1TWAK 2ZJPS 3PO2K 1J6VA 3GIRA 4A3EK 1IBAA 3RZDK 3LYWA 4KAWX 3GTJC 3WODA 2YU9K 4A3CC 1UV7A 3AH5A 3GTLC 1TWCK 3BUEA 1TWHC 2FQTA 3HOUC 1O2BA 1O28A 4Q4ZA 3I4MK 1TWCC 2V6SA 4LJZA 2NVXC 4WFBS 3S2HK 5DM7S 3GTPC 1SFOA 1DCHA 2L5NA 2JA6K 3GTMA 2JA8C 4WFAS 1O2FB 4MEXA 1WORA 1DCPA 1BGWA 1JQWA 1I50A 2JA7K 5IP7C 2E2IA 1INNA 4BXXK 4KASA 2PA8L 1FEUA 1K83A 4WF9S 3H0GA 4A3LC 3S1QC 4BXXC 5FJ8K 3S1MK 4IO9S 4GTBA 5FLMK 5M5WK 2GSNA 4G7ZA 3RZOC 1TWGA 4OINA 5IOQA 4G0VA 2Y3PA 3GTOK 2FQOA 1WCMA 3GTQK 1WIHA 5JVGS 4XCHA 3PIOS 4C3IK 3HOWK 4NOIA 4A3MK 2Y0SD 3LPXA 4C3IC 3HOWC 1VRQC 1G51A 4YG2A 3M3YK 3S1NK 4BBSK 1B4AA 1EI6A 4QJVB 1DCOA 3S1NC 3SZZA 4KC6A 4LLGA 3GTGA 4LK1A 4U67S 3NUHA 4YFKA 4GZYA 1TWFC 2NVQK 3TFIA 4ILDA 5IORA 3GTKK 4OIPA 2P8TA 4J3NA 3T00A 2Y0SL 3GTKC 2VUMC 3S14K 3AQPA 3QX3A 2ZJRS 2R93A 2KXYA 1GE9A 3I4NK 4BY1C 4Y52C 5TMCA 2A6HA 4IOAS 1PJ6A 1R9TK 4BLAA 3HKZL 1I6VA 2E2HC 2NVTK 5M3MK 4FM9A 3LAJA 2JA5K 5HL7S 5C3EK 3HOXC 4KM8A 2R92C 1ZVUA 4XSXA 2GSOA 4C3HC 1DD5A 4GFQA 2XCQA 4KMUA 5C44C 2A6EA 4AYBL 3DXJA 2L3UA 3FKIA 1L0WA 1TWAA 1Y1WK 1ZYRA 2CFAB 3BP3A 4GTEA 2R7ZC 3GTJK 1HI9A 5TJ3A 4A3CK 4FZBA 4C2MC 1Y1WC 3GTLK 2PA8D 1XXCA 1TWHK 3HOUK 4C45A 3PO3C 2YU9A 1O24A 2E2JC 4Y7NC 1B4BA 2RH6A 2NVXK 4X6AK 5TMFA 2B63C 3CQZC 1I3QC 3GTPK 1VH2A 4A3FC 4X6AC 5C4JK 1IS1A 2JA8K 2NVYA 3DLLS 4QJVA 5M5XK 2WB1D 3S2DC 4M1XA 4WILA 1C0AA 1RU0A 5JVHS 5C4JC 5IP7K 3S0XA 3GSIA 2JA6A 4KM9A 3TFJA 4A3LK 3S1QK 2A69A 4A93C 2JA7A 2RGRA 4A3JK 4A3DK 3RZOK 3BP8C 5EGHA 3EQLA 4A3JC 2GAHC 1SFOC 4A3DC 1WOSA 1VGXA 1IQ0A 3GTMC 1X31C 2WB1L 2A68A 1EK8A 4Q5SA 1F93A 3GEEA 1I50C 3H3VL 2E2IC 2PMZL 3GTOA 3OREA 3GTQA 1K83C 5HL8A 2D6FC 4QIWD 4GTDA 2ZUFA 3S1RK 2W7VA 2CW0A 2O5JA 4PAAA 3ERED 1Y1VA 1F7UA 1KQ4A 2KWAA 5HQHA 4ZH4A 3S1RC 4BKWA 5EGEA 1TWFK 1WCMC 3HKZD 3N0BA 4A3BC 5IYDC 4GTLA 2VUMK 1J98A 1YX2A 4A3GC 1ZBSA 2CFAA 3CF5S 4A3KC 5DM6S 3GTKA 4GT9A 3S16C 4QIWL 1WQFA 4C3JC 3G4CA 4LQYA 4BY1K 4Y52K 5M5YK 3TTGA 2KPUA 3GTGC 1VLOA 1USMA 2E2HK 3M4OC 4AYBD 5IOSA 1PJ5A 5IP9C 3HOVC 5IYCC 4KMAA 3N0CA 1R9TA 4LK0A 1J6XA 3HOXK 2R92K 3JSTA 2P5MA 2JA5A 5JFEA 2XCOA 4C3HK
chains in the Genus database with same CATH topology
5TMFA 4XLNA 3CQZC 2B63C 1XPPA 3GTGK 1I6HC 3M3YC 1I3QC 5C44K 5FLMK 3GTPK 2R93C 5M5WK 1Y1VC 4BBSC 4G7ZA 3RZOC 4JK1A 4A3FC 4X6AC 3HOZK 3M4OK 4OIOA 5C4JK 2JA8K 5M3FK 4QJVA 4OINA 5IP9K 5M5XK 3HOVK 2WB1D 3S15C 3S2DC 3HOZC 5IYCK 2R7ZK 3GTOK 4KN7A 4YFNA 5C4JC 3HOYC 4C2MK 5IP7K 3I4NK 3GTQK 1IW7A 5C4XC 5IYBC 2WAQL 1BDFA 4C3IK 3HOWK 3PO3K 4A3LK 3S1QK 2A69A 2E2JK 2NVQC 4NOIA 4YFXA 2Y0SD 4A93C 4Y7NK 4A3MK 2B63K 3CQZK 4XSZA 4C3IC 3HOWC 1I3QK 3M3YK 4YG2A 3S1NK 1I6HK 2R93K 4A3JK 4BBSK 4A3DK 4MQ9A 3RZOK 4A3FK 4QJVB 3S1NC 3EQLA 4BBRC 4LLGA 4A3JC 1SFOC 3S14C 4A3DC 3S15K 3S2DK 4KN4A 3GTMC 4LK1A 3HOYK 2BE5A 3I4NC 4A3IC 3S1MK 2WB1L 2A68A 3FKIC 4YFKA 1TWAC 5C4XK 5IYBK 4Q5SA 4GZYA 1I50C 3H3VL 3H3VD 1TWFC 3PO2C 1R9TC 2E2IC 2PMZL 2NVQK 2PMZD 4A93K 3GTKK 2NVTC 1SMYA 4A3EC 1K83C 2PPBA 4OIPA 3RZDC 2JA5C 2Y0SL 2YU9C 3GTKC 2VUMC 4QIWD 4MEYA 4XLPA 5C3EC 4G7HA 3S17K 2NVYK 4BBRK 3S14K 3S1RK 1SFOK 2CW0A 2O5JA 3K7AK 3GTMK 2O5IA 3I4MC 2NVYC 4BY1C 4Y52C 3S17C 4A3IK 5TMCA 4ZH4A 3S1RC 3S2HC 1TWAK 2A6HA 3FKIK 1HQMA 3K7AC 1I50K 3PO2K 1TWFK 1WCMC 1R9TK 2E2IK 4BY7K 3HKZL 3HKZD 2JA6C 1I6VA 2E2HC 2NVTK 5M3MK 4A3EK 4A3BC 1K83K 3H0GK 3RZDK 4BY7C 2JA5K 5IYDC 3GTJC 3WODA 2YU9K 2VUMK 2JA7C 4A3GC 4A3CC 3H0GC 5C3EK 4A3KC 3GTLC 1TWCK 3HOXC 5D4DA 1TWHC 3S16C 2R92C 3HOUC 4QIWL 4XSXA 4OIRA 4Q4ZA 4C3JC 3I4MK 1TWCC 3S1MC 1TWGK 4C3HC 4LJZA 2NVXC 4BY1K 3S2HK 4Y52K 5M5YK 3GTGC 4KMUA 5C44C 5FLMC 3GTPC 1WCMK 1TWGC 4A3MC 2A6EA 2E2HK 2JA6K 3M4OC 4AYBL 4AYBD 4A3BK 3DXJA 2JA8C 1YNNA 5IP9C 1Y1WK 3HOVC 5IYCC 1ZYRA 4MEXA 3GTJK 5IYDK 2R7ZC 2JA7K 2WAQD 3GTOC 4A3GK 4A3CK 4C2MC 5IP7C 3GTQC 4A3KK 4LK0A 1Y1WC 3GTLK 3HOXK 2PA8L 4BXXK 2PA8D 1TWHK 1YNJA 2R92K 3S16K 3HOUK 4OIQA 3PO3C 4G7OA 4A3LC 4C3JK 3S1QC 4BXXC 2E2JC 1Y1VK 5FJ8K 4Y7NC 4C3HK 2NVXK 4X6AK
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5TMF A;  4XLN A;  3CQZ C;  2B63 C;  1XPP A;  3GTG K;  1I6H C;  3M3Y C;  1I3Q C;  5C44 K;  5FLM K;  3GTP K;  2R93 C;  5M5W K;  1Y1V C;  4BBS C;  4G7Z A;  3RZO C;  4JK1 A;  4A3F C;  4X6A C;  3HOZ K;  3M4O K;  4OIO A;  5C4J K;  2JA8 K;  5M3F K;  4QJV A;  4OIN A;  5IP9 K;  5M5X K;  3HOV K;  2WB1 D;  3S15 C;  3S2D C;  3HOZ C;  5IYC K;  2R7Z K;  3GTO K;  4KN7 A;  4YFN A;  5C4J C;  3HOY C;  4C2M K;  5IP7 K;  3I4N K;  3GTQ K;  1IW7 A;  5C4X C;  5IYB C;  2WAQ L;  1BDF A;  4C3I K;  3HOW K;  3PO3 K;  4A3L K;  3S1Q K;  2A69 A;  2E2J K;  2NVQ C;  4NOI A;  4YFX A;  2Y0S D;  4A93 C;  4Y7N K;  4A3M K;  2B63 K;  3CQZ K;  4XSZ A;  4C3I C;  3HOW C;  1I3Q K;  3M3Y K;  4YG2 A;  3S1N K;  1I6H K;  2R93 K;  4A3J K;  4BBS K;  4A3D K;  4MQ9 A;  3RZO K;  4A3F K;  4QJV B;  3S1N C;  3EQL A;  4BBR C;  4LLG A;  4A3J C;  1SFO C;  3S14 C;  4A3D C;  3S15 K;  3S2D K;  4KN4 A;  3GTM C;  4LK1 A;  3HOY K;  2BE5 A;  3I4N C;  4A3I C;  3S1M K;  2WB1 L;  2A68 A;  3FKI C;  4YFK A;  1TWA C;  5C4X K;  5IYB K;  4Q5S A;  4GZY A;  1I50 C;  3H3V L;  3H3V D;  1TWF C;  3PO2 C;  1R9T C;  2E2I C;  2PMZ L;  2NVQ K;  2PMZ D;  4A93 K;  3GTK K;  2NVT C;  1SMY A;  4A3E C;  1K83 C;  2PPB A;  4OIP A;  3RZD C;  2JA5 C;  2Y0S L;  2YU9 C;  3GTK C;  2VUM C;  4QIW D;  4MEY A;  4XLP A;  5C3E C;  4G7H A;  3S17 K;  2NVY K;  4BBR K;  3S14 K;  3S1R K;  1SFO K;  2CW0 A;  2O5J A;  3K7A K;  3GTM K;  2O5I A;  3I4M C;  2NVY C;  4BY1 C;  4Y52 C;  3S17 C;  4A3I K;  5TMC A;  4ZH4 A;  3S1R C;  3S2H C;  1TWA K;  2A6H A;  3FKI K;  1HQM A;  3K7A C;  1I50 K;  3PO2 K;  1TWF K;  1WCM C;  1R9T K;  2E2I K;  4BY7 K;  3HKZ L;  3HKZ D;  2JA6 C;  1I6V A;  2E2H C;  2NVT K;  5M3M K;  4A3E K;  4A3B C;  1K83 K;  3H0G K;  3RZD K;  4BY7 C;  2JA5 K;  5IYD C;  3GTJ C;  3WOD A;  2YU9 K;  2VUM K;  2JA7 C;  4A3G C;  4A3C C;  3H0G C;  5C3E K;  4A3K C;  3GTL C;  1TWC K;  3HOX C;  5D4D A;  1TWH C;  3S16 C;  2R92 C;  3HOU C;  4QIW L;  4XSX A;  4OIR A;  4Q4Z A;  4C3J C;  3I4M K;  1TWC C;  3S1M C;  1TWG K;  4C3H C;  4LJZ A;  2NVX C;  4BY1 K;  3S2H K;  4Y52 K;  5M5Y K;  3GTG C;  4KMU A;  5C44 C;  5FLM C;  3GTP C;  1WCM K;  1TWG C;  4A3M C;  2A6E A;  2E2H K;  2JA6 K;  3M4O C;  4AYB L;  4AYB D;  4A3B K;  3DXJ A;  2JA8 C;  1YNN A;  5IP9 C;  1Y1W K;  3HOV C;  5IYC C;  1ZYR A;  4MEX A;  3GTJ K;  5IYD K;  2R7Z C;  2JA7 K;  2WAQ D;  3GTO C;  4A3G K;  4A3C K;  4C2M C;  5IP7 C;  3GTQ C;  4A3K K;  4LK0 A;  1Y1W C;  3GTL K;  3HOX K;  2PA8 L;  4BXX K;  2PA8 D;  1TWH K;  1YNJ A;  2R92 K;  3S16 K;  3HOU K;  4OIQ A;  3PO3 C;  4G7O A;  4A3L C;  4C3J K;  3S1Q C;  4BXX C;  2E2J C;  1Y1V K;  5FJ8 K;  4Y7N C;  4C3H K;  2NVX K;  4X6A K; 
#chains in the Genus database with same CATH topology
 4XLN A;  5CJ9 A;  1IL2 A;  1I6H C;  5C44 K;  1J6W A;  2R93 C;  1XZQ B;  5M3F K;  3S15 C;  1O2A A;  2R7Z K;  4GTF A;  3HOY C;  4C2M K;  3G4A A;  1XZP B;  1IW7 A;  5C4X C;  5IYB C;  4IOC S;  1O26 A;  4GTC A;  3PO3 K;  3GTJ A;  2E2J K;  4KMD A;  4Y7N K;  3A8K A;  2B63 K;  3CQZ K;  3SZY A;  1ISE A;  1I3Q K;  3GTL A;  4WFN S;  1TWH A;  4KB4 A;  3FOE A;  4MQ9 A;  4A3F K;  3IPJ A;  4P5B A;  4KAR A;  1TWC A;  2NVX A;  4BBR C;  5CHP A;  3S2D K;  4WJ4 A;  3ADA C;  3L4J A;  3GTP A;  4KMH A;  2BE5 A;  4P5A A;  4A3I C;  3T02 A;  3FKI C;  3AD7 C;  1TWA C;  3AQO A;  5JVO A;  3H3V D;  3PO2 C;  4A93 K;  2PMZ D;  1EFW A;  2PHC B;  1JVI A;  3V4G A;  4A3E C;  2XCR B;  2PPB A;  3RZD C;  4PAB A;  3GEI A;  2YU9 C;  3CAG A;  4MEY A;  4G7H A;  3S17 K;  2NVY K;  1SFO K;  2ZJQ S;  4WJ3 M;  3K7A K;  3GTM K;  2ZUE A;  1WQH A;  3I4M C;  3S17 C;  2NVY C;  3Q3Q A;  3S2H C;  1HQM A;  3K7A C;  4KDD A;  1I50 K;  4DDQ A;  4BLB A;  2E2I K;  4BY7 K;  2JA6 C;  4KB2 A;  1K83 K;  3H0G K;  4BY7 C;  1PJ7 A;  4AH6 A;  2JA7 C;  3TFH A;  1ZXO A;  3H0G C;  5IOT A;  1O27 A;  5D4D A;  2JH3 A;  1XXA A;  4OIR A;  3S1M C;  1TWG K;  3A8I A;  3FHZ A;  4WCE S;  5FLM C;  1WCM K;  1ZQ1 C;  1TWG C;  1BJT A;  2GSU A;  3OEP A;  2ZFZ A;  4A3B K;  1YNN A;  1XZQ A;  4GTA A;  5IYD K;  3L4K A;  2WAQ D;  3GTO C;  1YCL A;  3N3Y A;  1TWF A;  4A3G K;  3GTQ C;  3VA7 A;  4A3K K;  4LOW A;  4LR2 A;  3S16 K;  1YNJ A;  1XZP A;  4OIQ A;  4G7O A;  4C3J K;  1Y1V K;  4G0U A;  4A3M C;  2VUM A;  1XPP A;  3LAP A;  3GTG K;  3M3Y C;  3A8J A;  1IE0 A;  1Y1V C;  1WOO A;  4BBS C;  1WSR A;  4JK1 A;  3HOZ K;  3M4O K;  4OIO A;  1F9N A;  3HXA A;  5IP9 K;  3HOV K;  5IYC K;  3HOZ C;  4KN7 A;  4YFN A;  1O25 A;  2KQ1 A;  1EQR A;  2E2H A;  1USO A;  3MML B;  2WAQ L;  1JOE A;  1BDF A;  1BS2 A;  1WQG A;  2NVQ C;  2EBB A;  4YFX A;  5L46 A;  1WSV A;  4XSZ A;  1I6H K;  5E68 A;  2R93 K;  2R92 A;  1V5V A;  3GEH A;  3AD8 C;  1VJE A;  1EH1 A;  1F7V A;  1WOP A;  3S14 C;  3S15 K;  4KN4 A;  3OPF A;  4P9S A;  3HOY K;  4RMF A;  3I4N C;  3AD9 C;  1XXB A;  5C4X K;  5IYB K;  2V6U A;  3T01 A;  1R9T C;  3PIP S;  2R7Z A;  2NVT C;  1SMY A;  1Y1W A;  2JA5 C;  2GAG C;  4O2D A;  1AB4 A;  4XLP A;  5C3E C;  4BBR K;  2B63 A;  1O29 A;  3CQZ A;  3GDZ A;  4G0W A;  1I3Q A;  2V6T A;  2O5I A;  4A3I K;  4KAT A;  3FOF A;  3FKI K;  1TWA K;  2ZJP S;  3PO2 K;  1J6V A;  3GIR A;  4A3E K;  1IBA A;  3RZD K;  3LYW A;  4KAW X;  3GTJ C;  3WOD A;  2YU9 K;  4A3C C;  1UV7 A;  3AH5 A;  3GTL C;  1TWC K;  3BUE A;  1TWH C;  2FQT A;  3HOU C;  1O2B A;  1O28 A;  4Q4Z A;  3I4M K;  1TWC C;  2V6S A;  4LJZ A;  2NVX C;  4WFB S;  3S2H K;  5DM7 S;  3GTP C;  1SFO A;  1DCH A;  2L5N A;  2JA6 K;  3GTM A;  2JA8 C;  4WFA S;  1O2F B;  4MEX A;  1WOR A;  1DCP A;  1BGW A;  1JQW A;  1I50 A;  2JA7 K;  5IP7 C;  2E2I A;  1INN A;  4BXX K;  4KAS A;  2PA8 L;  1FEU A;  1K83 A;  4WF9 S;  3H0G A;  4A3L C;  3S1Q C;  4BXX C;  5FJ8 K;  3S1M K;  4IO9 S;  4GTB A;  5FLM K;  5M5W K;  2GSN A;  4G7Z A;  3RZO C;  1TWG A;  4OIN A;  5IOQ A;  4G0V A;  2Y3P A;  3GTO K;  2FQO A;  1WCM A;  3GTQ K;  1WIH A;  5JVG S;  4XCH A;  3PIO S;  4C3I K;  3HOW K;  4NOI A;  4A3M K;  2Y0S D;  3LPX A;  4C3I C;  3HOW C;  1VRQ C;  1G51 A;  4YG2 A;  3M3Y K;  3S1N K;  4BBS K;  1B4A A;  1EI6 A;  4QJV B;  1DCO A;  3S1N C;  3SZZ A;  4KC6 A;  4LLG A;  3GTG A;  4LK1 A;  4U67 S;  3NUH A;  4YFK A;  4GZY A;  1TWF C;  2NVQ K;  3TFI A;  4ILD A;  5IOR A;  3GTK K;  4OIP A;  2P8T A;  4J3N A;  3T00 A;  2Y0S L;  3GTK C;  2VUM C;  3S14 K;  3AQP A;  3QX3 A;  2ZJR S;  2R93 A;  2KXY A;  1GE9 A;  3I4N K;  4BY1 C;  4Y52 C;  5TMC A;  2A6H A;  4IOA S;  1PJ6 A;  1R9T K;  4BLA A;  3HKZ L;  1I6V A;  2E2H C;  2NVT K;  5M3M K;  4FM9 A;  3LAJ A;  2JA5 K;  5HL7 S;  5C3E K;  3HOX C;  4KM8 A;  2R92 C;  1ZVU A;  4XSX A;  2GSO A;  4C3H C;  1DD5 A;  4GFQ A;  2XCQ A;  4KMU A;  5C44 C;  2A6E A;  4AYB L;  3DXJ A;  2L3U A;  3FKI A;  1L0W A;  1TWA A;  1Y1W K;  1ZYR A;  2CFA B;  3BP3 A;  4GTE A;  2R7Z C;  3GTJ K;  1HI9 A;  5TJ3 A;  4A3C K;  4FZB A;  4C2M C;  1Y1W C;  3GTL K;  2PA8 D;  1XXC A;  1TWH K;  3HOU K;  4C45 A;  3PO3 C;  2YU9 A;  1O24 A;  2E2J C;  4Y7N C;  1B4B A;  2RH6 A;  2NVX K;  4X6A K;  5TMF A;  2B63 C;  3CQZ C;  1I3Q C;  3GTP K;  1VH2 A;  4A3F C;  4X6A C;  5C4J K;  1IS1 A;  2JA8 K;  2NVY A;  3DLL S;  4QJV A;  5M5X K;  2WB1 D;  3S2D C;  4M1X A;  4WIL A;  1C0A A;  1RU0 A;  5JVH S;  5C4J C;  5IP7 K;  3S0X A;  3GSI A;  2JA6 A;  4KM9 A;  3TFJ A;  4A3L K;  3S1Q K;  2A69 A;  4A93 C;  2JA7 A;  2RGR A;  4A3J K;  4A3D K;  3RZO K;  3BP8 C;  5EGH A;  3EQL A;  4A3J C;  2GAH C;  1SFO C;  4A3D C;  1WOS A;  1VGX A;  1IQ0 A;  3GTM C;  1X31 C;  2WB1 L;  2A68 A;  1EK8 A;  4Q5S A;  1F93 A;  3GEE A;  1I50 C;  3H3V L;  2E2I C;  2PMZ L;  3GTO A;  3ORE A;  3GTQ A;  1K83 C;  5HL8 A;  2D6F C;  4QIW D;  4GTD A;  2ZUF A;  3S1R K;  2W7V A;  2CW0 A;  2O5J A;  4PAA A;  3ERE D;  1Y1V A;  1F7U A;  1KQ4 A;  2KWA A;  5HQH A;  4ZH4 A;  3S1R C;  4BKW A;  5EGE A;  1TWF K;  1WCM C;  3HKZ D;  3N0B A;  4A3B C;  5IYD C;  4GTL A;  2VUM K;  1J98 A;  1YX2 A;  4A3G C;  1ZBS A;  2CFA A;  3CF5 S;  4A3K C;  5DM6 S;  3GTK A;  4GT9 A;  3S16 C;  4QIW L;  1WQF A;  4C3J C;  3G4C A;  4LQY A;  4BY1 K;  4Y52 K;  5M5Y K;  3TTG A;  2KPU A;  3GTG C;  1VLO A;  1USM A;  2E2H K;  3M4O C;  4AYB D;  5IOS A;  1PJ5 A;  5IP9 C;  3HOV C;  5IYC C;  4KMA A;  3N0C A;  1R9T A;  4LK0 A;  1J6X A;  3HOX K;  2R92 K;  3JST A;  2P5M A;  2JA5 A;  5JFE A;  2XCO A;  4C3H K; 
#chains in the Genus database with same CATH homology
 5TMF A;  4XLN A;  3CQZ C;  2B63 C;  1XPP A;  3GTG K;  1I6H C;  3M3Y C;  1I3Q C;  5C44 K;  5FLM K;  3GTP K;  2R93 C;  5M5W K;  1Y1V C;  4BBS C;  4G7Z A;  3RZO C;  4JK1 A;  4A3F C;  4X6A C;  3HOZ K;  3M4O K;  4OIO A;  5C4J K;  2JA8 K;  5M3F K;  4QJV A;  4OIN A;  5IP9 K;  5M5X K;  3HOV K;  2WB1 D;  3S15 C;  3S2D C;  3HOZ C;  5IYC K;  2R7Z K;  3GTO K;  4KN7 A;  4YFN A;  5C4J C;  3HOY C;  4C2M K;  5IP7 K;  3I4N K;  3GTQ K;  1IW7 A;  5C4X C;  5IYB C;  2WAQ L;  1BDF A;  4C3I K;  3HOW K;  3PO3 K;  4A3L K;  3S1Q K;  2A69 A;  2E2J K;  2NVQ C;  4NOI A;  4YFX A;  2Y0S D;  4A93 C;  4Y7N K;  4A3M K;  2B63 K;  3CQZ K;  4XSZ A;  4C3I C;  3HOW C;  1I3Q K;  3M3Y K;  4YG2 A;  3S1N K;  1I6H K;  2R93 K;  4A3J K;  4BBS K;  4A3D K;  4MQ9 A;  3RZO K;  4A3F K;  4QJV B;  3S1N C;  3EQL A;  4BBR C;  4LLG A;  4A3J C;  1SFO C;  3S14 C;  4A3D C;  3S15 K;  3S2D K;  4KN4 A;  3GTM C;  4LK1 A;  3HOY K;  2BE5 A;  3I4N C;  4A3I C;  3S1M K;  2WB1 L;  2A68 A;  3FKI C;  4YFK A;  1TWA C;  5C4X K;  5IYB K;  4Q5S A;  4GZY A;  1I50 C;  3H3V L;  3H3V D;  1TWF C;  3PO2 C;  1R9T C;  2E2I C;  2PMZ L;  2NVQ K;  2PMZ D;  4A93 K;  3GTK K;  2NVT C;  1SMY A;  4A3E C;  1K83 C;  2PPB A;  4OIP A;  3RZD C;  2JA5 C;  2Y0S L;  2YU9 C;  3GTK C;  2VUM C;  4QIW D;  4MEY A;  4XLP A;  5C3E C;  4G7H A;  3S17 K;  2NVY K;  4BBR K;  3S14 K;  3S1R K;  1SFO K;  2CW0 A;  2O5J A;  3K7A K;  3GTM K;  2O5I A;  3I4M C;  2NVY C;  4BY1 C;  4Y52 C;  3S17 C;  4A3I K;  5TMC A;  4ZH4 A;  3S1R C;  3S2H C;  1TWA K;  2A6H A;  3FKI K;  1HQM A;  3K7A C;  1I50 K;  3PO2 K;  1TWF K;  1WCM C;  1R9T K;  2E2I K;  4BY7 K;  3HKZ L;  3HKZ D;  2JA6 C;  1I6V A;  2E2H C;  2NVT K;  5M3M K;  4A3E K;  4A3B C;  1K83 K;  3H0G K;  3RZD K;  4BY7 C;  2JA5 K;  5IYD C;  3GTJ C;  3WOD A;  2YU9 K;  2VUM K;  2JA7 C;  4A3G C;  4A3C C;  3H0G C;  5C3E K;  4A3K C;  3GTL C;  1TWC K;  3HOX C;  5D4D A;  1TWH C;  3S16 C;  2R92 C;  3HOU C;  4QIW L;  4XSX A;  4OIR A;  4Q4Z A;  4C3J C;  3I4M K;  1TWC C;  3S1M C;  1TWG K;  4C3H C;  4LJZ A;  2NVX C;  4BY1 K;  3S2H K;  4Y52 K;  5M5Y K;  3GTG C;  4KMU A;  5C44 C;  5FLM C;  3GTP C;  1WCM K;  1TWG C;  4A3M C;  2A6E A;  2E2H K;  2JA6 K;  3M4O C;  4AYB L;  4AYB D;  4A3B K;  3DXJ A;  2JA8 C;  1YNN A;  5IP9 C;  1Y1W K;  3HOV C;  5IYC C;  1ZYR A;  4MEX A;  3GTJ K;  5IYD K;  2R7Z C;  2JA7 K;  2WAQ D;  3GTO C;  4A3G K;  4A3C K;  4C2M C;  5IP7 C;  3GTQ C;  4A3K K;  4LK0 A;  1Y1W C;  3GTL K;  3HOX K;  2PA8 L;  4BXX K;  2PA8 D;  1TWH K;  1YNJ A;  2R92 K;  3S16 K;  3HOU K;  4OIQ A;  3PO3 C;  4G7O A;  4A3L C;  4C3J K;  3S1Q C;  4BXX C;  2E2J C;  1Y1V K;  5FJ8 K;  4Y7N C;  4C3H K;  2NVX K;  4X6A K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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