2JA6C

Cpd lesion containing rna polymerase ii elongation complex b
Total Genus 42
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
42
sequence length
267
structure length
267
Chain Sequence
SEEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords DNA-DIRECTED RNA POLYMERASE II LARGEST SUBUNIT
publication title CPD damage recognition by transcribing RNA polymerase II.
pubmed doi rcsb
molecule tags Transferase
total genus 42
structure length 267
sequence length 267
ec nomenclature
pdb deposition date 2006-11-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 2ja6C02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 2ja6C01
1I3QC 3S14K 3S15K 2O5IA 3S17K 3S15C 2VUMK 2NVXK 2WB1L 2NVXC 4MEYA 4QJVA 3GTMK 4KN7A 3GTJC 3HOZK 5IP9C 3GTMC 3S1RK 4LJZA 5C4JK 2NVQK 3PO3K 2YU9K 5C44C 3PO3C 5C4JC 3S2HC 4MEXA 3S1NC 3WODA 4C3HK 4ZH4A 1IW7A 1TWCC 2PA8D 5M3MK 3H3VL 2R92K 4QJVB 2JA7K 5TMCA 2E2JK 1TWGK 3GTLK 2A69A 4XLNA 4QIWL 2JA5C 4G7HA 2A6HA 1SFOK 4A3FK 4A3DK 4BY7K 3H0GC 4A3CK 4A3FC 5FLMK 1YNNA 3H3VD 5FLMC 3HOUC 3GTKK 3GTKC 4LK1A 4LLGA 2E2HK 2PA8L 4XLPA 3S16K 5M5YK 4XSZA 5C4XK 4BY1K 3DXJA 2NVTC 4BBRC 5C4XC 2NVYK 3S14C 3I4NK 4A3EK 3S17C 4KN4A 2NVYC 4QIWD 3I4NC 3S1QK 2VUMC 4A3EC 2O5JA 5FJ8K 2B63K 4MQ9A 4C2MK 3HOZC 3CQZK 3RZOK 1TWHK 3S1RC 2NVQC 4G7OA 2YU9C 1TWHC 1TWFK 4C3HC 2A68A 4Y7NK 1I6HK 1Y1VK 4Y7NC 2R92C 4YFXA 1I6HC 1R9TK 4A3LK 2JA7C 4YFKA 2E2JC 1TWGC 4A3LC 1YNJA 3GTLC 1SMYA 3GTPK 4YG2A 1SFOC 3S1MK 4BY7C 4A3DC 4A3CC 3HOWK 3HOWC 4A3GK 4JK1A 4NOIA 4A3GC 1K83K 3HOXK 1HQMA 2E2HC 3HOXC 3FKIK 4A3JK 4GZYA 4BBSK 3S16C 4A93K 4A3JC 3HOVK 5IP7K 4BY1C 1XPPA 3GTQK 4A93C 4OINA 3HOVC 3RZDK 4A3IK 1Y1WK 1TWAK 2E2IK 5IYDK 5IYBK 5IYDC 1Y1WC 3GTGK 2R93K 4LK0A 2B63C 5IYBC 4OIRA 4OIQA 2R93C 4C2MC 2NVTK 3CQZC 4Y52K 3RZOC 5IYCK 3PO2K 4BXXK 3HKZD 3PO2C 1TWFC 2PMZD 3M3YK 1ZYRA 3K7AK 2R7ZK 4X6AK 1Y1VC 2R7ZC 1I6VA 5C3EK 1R9TC 4OIOA 3GTOK 4XSXA 5M5WK 3GTPC 1I3QK 5M3FK 2CW0A 3S1MC 4C3IK 4AYBD 4Q4ZA 4C3IC 3S2DK 1I50K 3HKZL 3GTJK 3S2DC 2PMZL 4A3KK 4OIPA 1K83C 1I50C 4A3KC 5IP9K 4YFNA 3FKIC 2Y0SD 4KMUA 4BBSC 5C44K 3S2HK 5IP7C 3S1NK 3GTQC 3RZDC 1TWCK 3EQLA 4A3IC 2E2IC 1TWAC 2BE5A 2PPBA 2JA6K 2JA6C 2WAQL 3GTGC 4AYBL 2JA5K 2JA8K 4Y52C 1BDFA 5IYCC 2JA8C 3H0GK 3HOYK 2WB1D 4BXXC 3M4OK 3HOYC 2Y0SL 3HOUK 3M4OC 2A6EA 3M3YC 3K7AC 4A3MK 4A3BK 4X6AC 3I4MK 1WCMK 4A3MC 4A3BC 5C3EC 3I4MC 4Q5SA 1WCMC 5M5XK 4C3JK 5TMFA 3GTOC 4C3JC 2WAQD 5D4DA 4G7ZA 4BBRK 3S1QC
chains in the Genus database with same CATH superfamily
3S17K 1J6VA 2NVXK 5HL7S 1ZBSA 4KN7A 5IP9C 3S1RK 5C4JK 2YU9K 3S1NC 3N0CA 1IW7A 2YU9A 2PA8D 1O27A 1EK8A 3GTLK 2A69A 4G7HA 4A3FK 3H0GC 4A3CK 1DCHA 5FLMK 3GTLA 3GTKK 2GSNA 3S16K 5M5YK 4XSZA 1GE9A 1G51A 4KN4A 2NVYC 4QIWD 3I4NC 4WF9S 2V6SA 4WCES 3HOZC 1WORA 1TWHK 2ZJRS 2NVQC 1XZQB 3A8JA 1O29A 4GTEA 4GTFA 4Y7NK 4FM9A 1I6HC 4A3LK 1R9TK 2JA7C 4RMFA 2EBBA 1VLOA 1DD5A 5IOTA 1R9TA 1VRQC 4YG2A 1SFOC 3HOWC 4A3GK 4JK1A 2KQ1A 1PJ5A 2GSUA 4GZYA 4WJ4A 3HOVK 1I50A 2E2IK 1TWAK 5IYDC 1Y1WC 5D4DA 2CFAA 2B63C 4KM8A 3FOFA 4OIRA 4OIQA 2E2IA 1TWAA 3GEEA 3CQZC 3RZOC 3PO2K 4BXXK 1TWFC 5TJ3A 1ZYRA 3M3YK 4J3NA 1HI9A 2ZUFA 2R7ZC 5C3EK 4OIOA 3GTOK 4XSXA 3GSIA 5E68A 5M5WK 3GTPC 3N3YA 3L4KA 2L3UA 3SZZA 3FOEA 3GTOA 2XCQA 4GFQA 1K83C 5IP9K 4C45A 3ERED 5IP7C 3S1NK 3LAPA 3AD8C 2JA6C 1XZPA 4AYBL 2Y3PA 1BDFA 2KXYA 4WFAS 5IYCC 3H0GK 3HOYK 1C0AA 4X6AC 3H0GA 1WCMK 4A3MC 4A3BC 3OEPA 1PJ7A 3I4MC 4Q5SA 2GAHC 4C3JK 1PJ6A 2WAQD 3S15K 4KAWX 5L46A 4QJVA 3HOZK 2NVYA 3GTMC 2NVQK 1WQFA 3PO3C 3CAGA 4MEXA 4AH6A 3WODA 3TTGA 4GTCA 2JA7K 1WOOA 1WQGA 4XLNA 2A6HA 1RU0A 3GEHA 2JA7A 1SFOK 4BLBA 1SFOA 3GEIA 3A8KA 2KWAA 4XLPA 4BBRC 5C4XC 4DDQA 2VUMC 4A3EC 2B63K 5JVHS 3CQZK 1UV7A 1DCOA 3RZOK 1Y1WA 2B63A 1IE0A 2ZFZA 1TWFK 3G4CA 3CQZA 1WSVA 4LQYA 2FQTA 2CFAB 1TWFA 4KM9A 2E2JC 1TWGC 1YNJA 2R7ZA 1SMYA 1JQWA 3GTPK 4BY7C 4A3DC 3GTPA 1XXBA 4NOIA 1K83K 1HQMA 2E2HC 3HOXC 4A3JK 5IP7K 1K83A 4A93C 1B4AA 1O25A 4LK0A 5IYBC 2R93C 2JA6A 1WOPA 1V5VA 5IYCK 1O26A 3BP8C 4X6AK 1XZPB 1I6VA 3A8IA 1O2FB 1F7UA 1VH2A 3AQOA 1F7VA 3T01A 2CW0A 4C3IK 4WILA 1O2BA 4AYBD 4Q4ZA 3S2DK 1I50K 5CHPA 4A3KC 3FKIC 1JOEA 4LR2A 3T02A 2FQOA 4G0WA 3GTMA 3GTQC 3RZDC 1IQ0A 3GTGC 1WQHA 3GIRA 2ZUEA 2JH3A 2JA8C 2ZJQS 5CJ9A 1B4BA 3M4OC 3K7AC 2ZJPS 4P5BA 1USMA 1YX2A 4BKWA 2W7VA 4BBRK 3S1QC 3PIOS 4KC6A 1EQRA 2VUMK 2NVXC 4MEYA 2RGRA 3GTJC 3QX3A 3SZYA 2VUMA 4LJZA 5JVGS 5IOQA 5C44C 5C4JC 3S2HC 4PAAA 1TWCC 5M3MK 3L4JA 1IL2A 2E2JK 5EGHA 1TWGK 5HL8A 4QIWL 3LPXA 4A3DK 4BY7K 1TWGA 4A3FC 3IPJA 4XCHA 1YNNA 5FLMC 3HOUC 5JVOA 3GTKC 4LLGA 3CF5S 2E2HK 4P9SA 2L5NA 1L0WA 4KDDA 3TFJA 3DXJA 3I4NK 2NVYK 4KMHA 1O28A 3S14C 2E2HA 2P8TA 5FJ8K 2O5JA 4WJ3M 4MQ9A 1EI6A 3BUEA 1TWHC 2R93A 4C3HC 2A68A 3AD9C 3AQPA 1I6HK 4Y7NC 2R92C 2XCOA 4BLAA 4YFKA 4A3LC 2KPUA 4P5AA 3HOWK 4M1XA 4A3GC 5IOSA 1WSRA 2V6TA 5HQHA 2GAGC 3FKIK 3HXAA 1F9NA 4KMAA 4BY1C 1XPPA 3GTQK 2D6FC 3HOVC 3RZDK 4GT9A 3FKIA 1Y1WK 5IYDK 5DM7S 3GTGK 4GTDA 3GTQA 3LAJA 4G0VA 4C2MC 3GTGA 3G4AA 3PO2C 3K7AK 2R7ZK 5DM6S 1Y1VC 1IS1A 3GDZA 1VGXA 3NUHA 3S1MC 2XCRB 5JFEA 3DLLS 3HKZL 3GTJK 4KB2A 2PMZL 4IO9S 4OIPA 4YFNA 1ZQ1C 5C44K 4BBSC 4KMUA 2NVXA 4LOWA 3GTJA 3OPFA 3S2HK 1TWCK 2JA6K 4A3IC 1X31C 4ILDA 2WAQL 3V4GA 3PIPS 1EFWA 1TWCA 4WFNS 4Y52C 2P5MA 1FEUA 1J6WA 3HOYC 2Y0SL 3HOUK 2A6EA 4U67S 4A3MK 4A3BK 3VA7A 3T00A 3I4MK 1INNA 1WCMC 3GTKA 4C3JC 5EGEA 3LYWA 5IORA 4G7ZA 3S0XA 3AD7C 1I3QC 3S14K 2O5IA 3S15C 1USOA 1JVIA 2WB1L 3Q3QA 3GTMK 4FZBA 2GSOA 3PO3K 1WOSA 1XXAA 3AH5A 4C3HK 4ZH4A 1TWHA 3H3VL 2R92K 4QJVB 1ZVUA 5TMCA 2JA5C 2R92A 4KASA 1BGWA 4KMDA 4IOCS 1J98A 4LK1A 2PA8L 3ADAC 5C4XK 4BY1K 1F93A 2NVTC 4A3EK 3S17C 3S1QK 1IBAA 4C2MK 3S1RC 2YU9C 4O2DA 3OREA 1Y1VK 1YCLA 4YFXA 3MMLB 4IOAS 3GTLC 1Y1VA 1DCPA 3S1MK 1J6XA 4A3CC 1AB4A 3HOXK 1XZQA 3TFIA 3TFHA 3S16C 4BBSK 4A93K 4A3JC 4OINA 4A3IK 2PHCB 5IYBK 2R93K 1O2AA 2NVTK 1KQ4A 4Y52K 1ISEA 4WFBS 3HKZD 4GTAA 2PMZD 3BP3A 1WIHA 2V6UA 1R9TC 4KB4A 3JSTA 1BS2A 1I3QK 1WCMA 4KATA 4C3IC 1I3QA 1O24A 4A3KK 3S2DC 1I50C 1BJTA 4GTLA 2Y0SD 4PABA 3EQLA 2E2IC 2PPBA 1TWAC 2BE5A 1VJEA 1XXCA 1ZXOA 3N0BA 3FHZA 2JA5K 2JA8K 2WB1D 4BXXC 2RH6A 3M4OK 2JA5A 4KARA 3M3YC 4GTBA 1EH1A 4G0UA 5C3EC 5M5XK 5TMFA 3GTOC 3H3VD 4G7OA 5M3FK
chains in the Genus database with same CATH topology
1I3QC 3S14K 3S15K 2O5IA 3S17K 3S15C 2VUMK 2NVXK 2WB1L 2NVXC 4MEYA 4QJVA 3GTMK 4KN7A 3GTJC 3HOZK 5IP9C 3GTMC 3S1RK 4LJZA 5C4JK 2NVQK 3PO3K 2YU9K 5C44C 3PO3C 5C4JC 3S2HC 4MEXA 3S1NC 3WODA 4C3HK 4ZH4A 1IW7A 1TWCC 2PA8D 5M3MK 3H3VL 2R92K 4QJVB 2JA7K 5TMCA 2E2JK 1TWGK 3GTLK 2A69A 4XLNA 4QIWL 2JA5C 4G7HA 2A6HA 1SFOK 4A3FK 4A3DK 4BY7K 3H0GC 4A3CK 4A3FC 5FLMK 1YNNA 3H3VD 5FLMC 3HOUC 3GTKK 3GTKC 4LK1A 4LLGA 2E2HK 2PA8L 4XLPA 3S16K 5M5YK 4XSZA 5C4XK 4BY1K 3DXJA 2NVTC 4BBRC 5C4XC 2NVYK 3S14C 3I4NK 4A3EK 3S17C 4KN4A 2NVYC 4QIWD 3I4NC 3S1QK 2VUMC 4A3EC 2O5JA 5FJ8K 2B63K 4MQ9A 4C2MK 3HOZC 3CQZK 3RZOK 1TWHK 3S1RC 2NVQC 4G7OA 2YU9C 1TWHC 1TWFK 4C3HC 2A68A 4Y7NK 1I6HK 1Y1VK 4Y7NC 2R92C 4YFXA 1I6HC 1R9TK 4A3LK 2JA7C 4YFKA 2E2JC 1TWGC 4A3LC 1YNJA 3GTLC 1SMYA 3GTPK 4YG2A 1SFOC 3S1MK 4BY7C 4A3DC 4A3CC 3HOWK 3HOWC 4A3GK 4JK1A 4NOIA 4A3GC 1K83K 3HOXK 1HQMA 2E2HC 3HOXC 3FKIK 4A3JK 4GZYA 4BBSK 3S16C 4A93K 4A3JC 3HOVK 5IP7K 4BY1C 1XPPA 3GTQK 4A93C 4OINA 3HOVC 3RZDK 4A3IK 1Y1WK 1TWAK 2E2IK 5IYDK 5IYBK 5IYDC 1Y1WC 3GTGK 2R93K 4LK0A 2B63C 5IYBC 4OIRA 4OIQA 2R93C 4C2MC 2NVTK 3CQZC 4Y52K 3RZOC 5IYCK 3PO2K 4BXXK 3HKZD 3PO2C 1TWFC 2PMZD 3M3YK 1ZYRA 3K7AK 2R7ZK 4X6AK 1Y1VC 2R7ZC 1I6VA 5C3EK 1R9TC 4OIOA 3GTOK 4XSXA 5M5WK 3GTPC 1I3QK 5M3FK 2CW0A 3S1MC 4C3IK 4AYBD 4Q4ZA 4C3IC 3S2DK 1I50K 3HKZL 3GTJK 3S2DC 2PMZL 4A3KK 4OIPA 1K83C 1I50C 4A3KC 5IP9K 4YFNA 3FKIC 2Y0SD 4KMUA 4BBSC 5C44K 3S2HK 5IP7C 3S1NK 3GTQC 3RZDC 1TWCK 3EQLA 4A3IC 2E2IC 1TWAC 2BE5A 2PPBA 2JA6K 2JA6C 2WAQL 3GTGC 4AYBL 2JA5K 2JA8K 4Y52C 1BDFA 5IYCC 2JA8C 3H0GK 3HOYK 2WB1D 4BXXC 3M4OK 3HOYC 2Y0SL 3HOUK 3M4OC 2A6EA 3M3YC 3K7AC 4A3MK 4A3BK 4X6AC 3I4MK 1WCMK 4A3MC 4A3BC 5C3EC 3I4MC 4Q5SA 1WCMC 5M5XK 4C3JK 5TMFA 3GTOC 4C3JC 2WAQD 5D4DA 4G7ZA 4BBRK 3S1QC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1I3Q C;  3S14 K;  3S15 K;  2O5I A;  3S17 K;  3S15 C;  2VUM K;  2NVX K;  2WB1 L;  2NVX C;  4MEY A;  4QJV A;  3GTM K;  4KN7 A;  3GTJ C;  3HOZ K;  5IP9 C;  3GTM C;  3S1R K;  4LJZ A;  5C4J K;  2NVQ K;  3PO3 K;  2YU9 K;  5C44 C;  3PO3 C;  5C4J C;  3S2H C;  4MEX A;  3S1N C;  3WOD A;  4C3H K;  4ZH4 A;  1IW7 A;  1TWC C;  2PA8 D;  5M3M K;  3H3V L;  2R92 K;  4QJV B;  2JA7 K;  5TMC A;  2E2J K;  1TWG K;  3GTL K;  2A69 A;  4XLN A;  4QIW L;  2JA5 C;  4G7H A;  2A6H A;  1SFO K;  4A3F K;  4A3D K;  4BY7 K;  3H0G C;  4A3C K;  4A3F C;  5FLM K;  1YNN A;  3H3V D;  5FLM C;  3HOU C;  3GTK K;  3GTK C;  4LK1 A;  4LLG A;  2E2H K;  2PA8 L;  4XLP A;  3S16 K;  5M5Y K;  4XSZ A;  5C4X K;  4BY1 K;  3DXJ A;  2NVT C;  4BBR C;  5C4X C;  2NVY K;  3S14 C;  3I4N K;  4A3E K;  3S17 C;  4KN4 A;  2NVY C;  4QIW D;  3I4N C;  3S1Q K;  2VUM C;  4A3E C;  2O5J A;  5FJ8 K;  2B63 K;  4MQ9 A;  4C2M K;  3HOZ C;  3CQZ K;  3RZO K;  1TWH K;  3S1R C;  2NVQ C;  4G7O A;  2YU9 C;  1TWH C;  1TWF K;  4C3H C;  2A68 A;  4Y7N K;  1I6H K;  1Y1V K;  4Y7N C;  2R92 C;  4YFX A;  1I6H C;  1R9T K;  4A3L K;  2JA7 C;  4YFK A;  2E2J C;  1TWG C;  4A3L C;  1YNJ A;  3GTL C;  1SMY A;  3GTP K;  4YG2 A;  1SFO C;  3S1M K;  4BY7 C;  4A3D C;  4A3C C;  3HOW K;  3HOW C;  4A3G K;  4JK1 A;  4NOI A;  4A3G C;  1K83 K;  3HOX K;  1HQM A;  2E2H C;  3HOX C;  3FKI K;  4A3J K;  4GZY A;  4BBS K;  3S16 C;  4A93 K;  4A3J C;  3HOV K;  5IP7 K;  4BY1 C;  1XPP A;  3GTQ K;  4A93 C;  4OIN A;  3HOV C;  3RZD K;  4A3I K;  1Y1W K;  1TWA K;  2E2I K;  5IYD K;  5IYB K;  5IYD C;  1Y1W C;  3GTG K;  2R93 K;  4LK0 A;  2B63 C;  5IYB C;  4OIR A;  4OIQ A;  2R93 C;  4C2M C;  2NVT K;  3CQZ C;  4Y52 K;  3RZO C;  5IYC K;  3PO2 K;  4BXX K;  3HKZ D;  3PO2 C;  1TWF C;  2PMZ D;  3M3Y K;  1ZYR A;  3K7A K;  2R7Z K;  4X6A K;  1Y1V C;  2R7Z C;  1I6V A;  5C3E K;  1R9T C;  4OIO A;  3GTO K;  4XSX A;  5M5W K;  3GTP C;  1I3Q K;  5M3F K;  2CW0 A;  3S1M C;  4C3I K;  4AYB D;  4Q4Z A;  4C3I C;  3S2D K;  1I50 K;  3HKZ L;  3GTJ K;  3S2D C;  2PMZ L;  4A3K K;  4OIP A;  1K83 C;  1I50 C;  4A3K C;  5IP9 K;  4YFN A;  3FKI C;  2Y0S D;  4KMU A;  4BBS C;  5C44 K;  3S2H K;  5IP7 C;  3S1N K;  3GTQ C;  3RZD C;  1TWC K;  3EQL A;  4A3I C;  2E2I C;  1TWA C;  2BE5 A;  2PPB A;  2JA6 K;  2JA6 C;  2WAQ L;  3GTG C;  4AYB L;  2JA5 K;  2JA8 K;  4Y52 C;  1BDF A;  5IYC C;  2JA8 C;  3H0G K;  3HOY K;  2WB1 D;  4BXX C;  3M4O K;  3HOY C;  2Y0S L;  3HOU K;  3M4O C;  2A6E A;  3M3Y C;  3K7A C;  4A3M K;  4A3B K;  4X6A C;  3I4M K;  1WCM K;  4A3M C;  4A3B C;  5C3E C;  3I4M C;  4Q5S A;  1WCM C;  5M5X K;  4C3J K;  5TMF A;  3GTO C;  4C3J C;  2WAQ D;  5D4D A;  4G7Z A;  4BBR K;  3S1Q C; 
#chains in the Genus database with same CATH topology
 3S17 K;  1J6V A;  2NVX K;  5HL7 S;  1ZBS A;  4KN7 A;  5IP9 C;  3S1R K;  5C4J K;  2YU9 K;  3S1N C;  3N0C A;  1IW7 A;  2YU9 A;  2PA8 D;  1O27 A;  1EK8 A;  3GTL K;  2A69 A;  4G7H A;  4A3F K;  3H0G C;  4A3C K;  1DCH A;  5FLM K;  3GTL A;  3GTK K;  2GSN A;  3S16 K;  5M5Y K;  4XSZ A;  1GE9 A;  1G51 A;  4KN4 A;  2NVY C;  4QIW D;  3I4N C;  4WF9 S;  2V6S A;  4WCE S;  3HOZ C;  1WOR A;  1TWH K;  2ZJR S;  2NVQ C;  1XZQ B;  3A8J A;  1O29 A;  4GTE A;  4GTF A;  4Y7N K;  4FM9 A;  1I6H C;  4A3L K;  1R9T K;  2JA7 C;  4RMF A;  2EBB A;  1VLO A;  1DD5 A;  5IOT A;  1R9T A;  1VRQ C;  4YG2 A;  1SFO C;  3HOW C;  4A3G K;  4JK1 A;  2KQ1 A;  1PJ5 A;  2GSU A;  4GZY A;  4WJ4 A;  3HOV K;  1I50 A;  2E2I K;  1TWA K;  5IYD C;  1Y1W C;  5D4D A;  2CFA A;  2B63 C;  4KM8 A;  3FOF A;  4OIR A;  4OIQ A;  2E2I A;  1TWA A;  3GEE A;  3CQZ C;  3RZO C;  3PO2 K;  4BXX K;  1TWF C;  5TJ3 A;  1ZYR A;  3M3Y K;  4J3N A;  1HI9 A;  2ZUF A;  2R7Z C;  5C3E K;  4OIO A;  3GTO K;  4XSX A;  3GSI A;  5E68 A;  5M5W K;  3GTP C;  3N3Y A;  3L4K A;  2L3U A;  3SZZ A;  3FOE A;  3GTO A;  2XCQ A;  4GFQ A;  1K83 C;  5IP9 K;  4C45 A;  3ERE D;  5IP7 C;  3S1N K;  3LAP A;  3AD8 C;  2JA6 C;  1XZP A;  4AYB L;  2Y3P A;  1BDF A;  2KXY A;  4WFA S;  5IYC C;  3H0G K;  3HOY K;  1C0A A;  4X6A C;  3H0G A;  1WCM K;  4A3M C;  4A3B C;  3OEP A;  1PJ7 A;  3I4M C;  4Q5S A;  2GAH C;  4C3J K;  1PJ6 A;  2WAQ D;  3S15 K;  4KAW X;  5L46 A;  4QJV A;  3HOZ K;  2NVY A;  3GTM C;  2NVQ K;  1WQF A;  3PO3 C;  3CAG A;  4MEX A;  4AH6 A;  3WOD A;  3TTG A;  4GTC A;  2JA7 K;  1WOO A;  1WQG A;  4XLN A;  2A6H A;  1RU0 A;  3GEH A;  2JA7 A;  1SFO K;  4BLB A;  1SFO A;  3GEI A;  3A8K A;  2KWA A;  4XLP A;  4BBR C;  5C4X C;  4DDQ A;  2VUM C;  4A3E C;  2B63 K;  5JVH S;  3CQZ K;  1UV7 A;  1DCO A;  3RZO K;  1Y1W A;  2B63 A;  1IE0 A;  2ZFZ A;  1TWF K;  3G4C A;  3CQZ A;  1WSV A;  4LQY A;  2FQT A;  2CFA B;  1TWF A;  4KM9 A;  2E2J C;  1TWG C;  1YNJ A;  2R7Z A;  1SMY A;  1JQW A;  3GTP K;  4BY7 C;  4A3D C;  3GTP A;  1XXB A;  4NOI A;  1K83 K;  1HQM A;  2E2H C;  3HOX C;  4A3J K;  5IP7 K;  1K83 A;  4A93 C;  1B4A A;  1O25 A;  4LK0 A;  5IYB C;  2R93 C;  2JA6 A;  1WOP A;  1V5V A;  5IYC K;  1O26 A;  3BP8 C;  4X6A K;  1XZP B;  1I6V A;  3A8I A;  1O2F B;  1F7U A;  1VH2 A;  3AQO A;  1F7V A;  3T01 A;  2CW0 A;  4C3I K;  4WIL A;  1O2B A;  4AYB D;  4Q4Z A;  3S2D K;  1I50 K;  5CHP A;  4A3K C;  3FKI C;  1JOE A;  4LR2 A;  3T02 A;  2FQO A;  4G0W A;  3GTM A;  3GTQ C;  3RZD C;  1IQ0 A;  3GTG C;  1WQH A;  3GIR A;  2ZUE A;  2JH3 A;  2JA8 C;  2ZJQ S;  5CJ9 A;  1B4B A;  3M4O C;  3K7A C;  2ZJP S;  4P5B A;  1USM A;  1YX2 A;  4BKW A;  2W7V A;  4BBR K;  3S1Q C;  3PIO S;  4KC6 A;  1EQR A;  2VUM K;  2NVX C;  4MEY A;  2RGR A;  3GTJ C;  3QX3 A;  3SZY A;  2VUM A;  4LJZ A;  5JVG S;  5IOQ A;  5C44 C;  5C4J C;  3S2H C;  4PAA A;  1TWC C;  5M3M K;  3L4J A;  1IL2 A;  2E2J K;  5EGH A;  1TWG K;  5HL8 A;  4QIW L;  3LPX A;  4A3D K;  4BY7 K;  1TWG A;  4A3F C;  3IPJ A;  4XCH A;  1YNN A;  5FLM C;  3HOU C;  5JVO A;  3GTK C;  4LLG A;  3CF5 S;  2E2H K;  4P9S A;  2L5N A;  1L0W A;  4KDD A;  3TFJ A;  3DXJ A;  3I4N K;  2NVY K;  4KMH A;  1O28 A;  3S14 C;  2E2H A;  2P8T A;  5FJ8 K;  2O5J A;  4WJ3 M;  4MQ9 A;  1EI6 A;  3BUE A;  1TWH C;  2R93 A;  4C3H C;  2A68 A;  3AD9 C;  3AQP A;  1I6H K;  4Y7N C;  2R92 C;  2XCO A;  4BLA A;  4YFK A;  4A3L C;  2KPU A;  4P5A A;  3HOW K;  4M1X A;  4A3G C;  5IOS A;  1WSR A;  2V6T A;  5HQH A;  2GAG C;  3FKI K;  3HXA A;  1F9N A;  4KMA A;  4BY1 C;  1XPP A;  3GTQ K;  2D6F C;  3HOV C;  3RZD K;  4GT9 A;  3FKI A;  1Y1W K;  5IYD K;  5DM7 S;  3GTG K;  4GTD A;  3GTQ A;  3LAJ A;  4G0V A;  4C2M C;  3GTG A;  3G4A A;  3PO2 C;  3K7A K;  2R7Z K;  5DM6 S;  1Y1V C;  1IS1 A;  3GDZ A;  1VGX A;  3NUH A;  3S1M C;  2XCR B;  5JFE A;  3DLL S;  3HKZ L;  3GTJ K;  4KB2 A;  2PMZ L;  4IO9 S;  4OIP A;  4YFN A;  1ZQ1 C;  5C44 K;  4BBS C;  4KMU A;  2NVX A;  4LOW A;  3GTJ A;  3OPF A;  3S2H K;  1TWC K;  2JA6 K;  4A3I C;  1X31 C;  4ILD A;  2WAQ L;  3V4G A;  3PIP S;  1EFW A;  1TWC A;  4WFN S;  4Y52 C;  2P5M A;  1FEU A;  1J6W A;  3HOY C;  2Y0S L;  3HOU K;  2A6E A;  4U67 S;  4A3M K;  4A3B K;  3VA7 A;  3T00 A;  3I4M K;  1INN A;  1WCM C;  3GTK A;  4C3J C;  5EGE A;  3LYW A;  5IOR A;  4G7Z A;  3S0X A;  3AD7 C;  1I3Q C;  3S14 K;  2O5I A;  3S15 C;  1USO A;  1JVI A;  2WB1 L;  3Q3Q A;  3GTM K;  4FZB A;  2GSO A;  3PO3 K;  1WOS A;  1XXA A;  3AH5 A;  4C3H K;  4ZH4 A;  1TWH A;  3H3V L;  2R92 K;  4QJV B;  1ZVU A;  5TMC A;  2JA5 C;  2R92 A;  4KAS A;  1BGW A;  4KMD A;  4IOC S;  1J98 A;  4LK1 A;  2PA8 L;  3ADA C;  5C4X K;  4BY1 K;  1F93 A;  2NVT C;  4A3E K;  3S17 C;  3S1Q K;  1IBA A;  4C2M K;  3S1R C;  2YU9 C;  4O2D A;  3ORE A;  1Y1V K;  1YCL A;  4YFX A;  3MML B;  4IOA S;  3GTL C;  1Y1V A;  1DCP A;  3S1M K;  1J6X A;  4A3C C;  1AB4 A;  3HOX K;  1XZQ A;  3TFI A;  3TFH A;  3S16 C;  4BBS K;  4A93 K;  4A3J C;  4OIN A;  4A3I K;  2PHC B;  5IYB K;  2R93 K;  1O2A A;  2NVT K;  1KQ4 A;  4Y52 K;  1ISE A;  4WFB S;  3HKZ D;  4GTA A;  2PMZ D;  3BP3 A;  1WIH A;  2V6U A;  1R9T C;  4KB4 A;  3JST A;  1BS2 A;  1I3Q K;  1WCM A;  4KAT A;  4C3I C;  1I3Q A;  1O24 A;  4A3K K;  3S2D C;  1I50 C;  1BJT A;  4GTL A;  2Y0S D;  4PAB A;  3EQL A;  2E2I C;  2PPB A;  1TWA C;  2BE5 A;  1VJE A;  1XXC A;  1ZXO A;  3N0B A;  3FHZ A;  2JA5 K;  2JA8 K;  2WB1 D;  4BXX C;  2RH6 A;  3M4O K;  2JA5 A;  4KAR A;  3M3Y C;  4GTB A;  1EH1 A;  4G0U A;  5C3E C;  5M5X K;  5TMF A;  3GTO C;  3H3V D;  4G7O A;  5M3F K; 
#chains in the Genus database with same CATH homology
 1I3Q C;  3S14 K;  3S15 K;  2O5I A;  3S17 K;  3S15 C;  2VUM K;  2NVX K;  2WB1 L;  2NVX C;  4MEY A;  4QJV A;  3GTM K;  4KN7 A;  3GTJ C;  3HOZ K;  5IP9 C;  3GTM C;  3S1R K;  4LJZ A;  5C4J K;  2NVQ K;  3PO3 K;  2YU9 K;  5C44 C;  3PO3 C;  5C4J C;  3S2H C;  4MEX A;  3S1N C;  3WOD A;  4C3H K;  4ZH4 A;  1IW7 A;  1TWC C;  2PA8 D;  5M3M K;  3H3V L;  2R92 K;  4QJV B;  2JA7 K;  5TMC A;  2E2J K;  1TWG K;  3GTL K;  2A69 A;  4XLN A;  4QIW L;  2JA5 C;  4G7H A;  2A6H A;  1SFO K;  4A3F K;  4A3D K;  4BY7 K;  3H0G C;  4A3C K;  4A3F C;  5FLM K;  1YNN A;  3H3V D;  5FLM C;  3HOU C;  3GTK K;  3GTK C;  4LK1 A;  4LLG A;  2E2H K;  2PA8 L;  4XLP A;  3S16 K;  5M5Y K;  4XSZ A;  5C4X K;  4BY1 K;  3DXJ A;  2NVT C;  4BBR C;  5C4X C;  2NVY K;  3S14 C;  3I4N K;  4A3E K;  3S17 C;  4KN4 A;  2NVY C;  4QIW D;  3I4N C;  3S1Q K;  2VUM C;  4A3E C;  2O5J A;  5FJ8 K;  2B63 K;  4MQ9 A;  4C2M K;  3HOZ C;  3CQZ K;  3RZO K;  1TWH K;  3S1R C;  2NVQ C;  4G7O A;  2YU9 C;  1TWH C;  1TWF K;  4C3H C;  2A68 A;  4Y7N K;  1I6H K;  1Y1V K;  4Y7N C;  2R92 C;  4YFX A;  1I6H C;  1R9T K;  4A3L K;  2JA7 C;  4YFK A;  2E2J C;  1TWG C;  4A3L C;  1YNJ A;  3GTL C;  1SMY A;  3GTP K;  4YG2 A;  1SFO C;  3S1M K;  4BY7 C;  4A3D C;  4A3C C;  3HOW K;  3HOW C;  4A3G K;  4JK1 A;  4NOI A;  4A3G C;  1K83 K;  3HOX K;  1HQM A;  2E2H C;  3HOX C;  3FKI K;  4A3J K;  4GZY A;  4BBS K;  3S16 C;  4A93 K;  4A3J C;  3HOV K;  5IP7 K;  4BY1 C;  1XPP A;  3GTQ K;  4A93 C;  4OIN A;  3HOV C;  3RZD K;  4A3I K;  1Y1W K;  1TWA K;  2E2I K;  5IYD K;  5IYB K;  5IYD C;  1Y1W C;  3GTG K;  2R93 K;  4LK0 A;  2B63 C;  5IYB C;  4OIR A;  4OIQ A;  2R93 C;  4C2M C;  2NVT K;  3CQZ C;  4Y52 K;  3RZO C;  5IYC K;  3PO2 K;  4BXX K;  3HKZ D;  3PO2 C;  1TWF C;  2PMZ D;  3M3Y K;  1ZYR A;  3K7A K;  2R7Z K;  4X6A K;  1Y1V C;  2R7Z C;  1I6V A;  5C3E K;  1R9T C;  4OIO A;  3GTO K;  4XSX A;  5M5W K;  3GTP C;  1I3Q K;  5M3F K;  2CW0 A;  3S1M C;  4C3I K;  4AYB D;  4Q4Z A;  4C3I C;  3S2D K;  1I50 K;  3HKZ L;  3GTJ K;  3S2D C;  2PMZ L;  4A3K K;  4OIP A;  1K83 C;  1I50 C;  4A3K C;  5IP9 K;  4YFN A;  3FKI C;  2Y0S D;  4KMU A;  4BBS C;  5C44 K;  3S2H K;  5IP7 C;  3S1N K;  3GTQ C;  3RZD C;  1TWC K;  3EQL A;  4A3I C;  2E2I C;  1TWA C;  2BE5 A;  2PPB A;  2JA6 K;  2JA6 C;  2WAQ L;  3GTG C;  4AYB L;  2JA5 K;  2JA8 K;  4Y52 C;  1BDF A;  5IYC C;  2JA8 C;  3H0G K;  3HOY K;  2WB1 D;  4BXX C;  3M4O K;  3HOY C;  2Y0S L;  3HOU K;  3M4O C;  2A6E A;  3M3Y C;  3K7A C;  4A3M K;  4A3B K;  4X6A C;  3I4M K;  1WCM K;  4A3M C;  4A3B C;  5C3E C;  3I4M C;  4Q5S A;  1WCM C;  5M5X K;  4C3J K;  5TMF A;  3GTO C;  4C3J C;  2WAQ D;  5D4D A;  4G7Z A;  4BBR K;  3S1Q C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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