3HOVC

Complete rna polymerase ii elongation complex ii
Total Genus 52
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
52
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Structural basis of transcription: mismatch-specific fidelity mechanisms and paused RNA polymerase II with frayed RNA.
pubmed doi rcsb
molecule tags Transcription, transferase/dna/rna
total genus 52
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2009-06-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3hovC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3hovC01
3GTMC 4A3FC 4A3GK 2A68A 4MEXA 2A6EA 5IYBK 2E2IK 3I4NC 3S1RK 4AYBD 1I50C 2PA8L 1Y1VC 2WB1L 4QJVB 4C3JK 4NOIA 3S17K 3S14C 5FLMK 5C44C 3GTPC 2R93K 3GTQK 4BY7K 4LLGA 3HKZD 1TWCK 2BE5A 4A3GC 2Y0SD 3GTKK 1I6HK 4A3EC 5IYBC 2E2IC 4G7HA 3S1RC 3EQLA 4C3JC 4LJZA 2R93C 5IP9K 1TWFK 5M5YK 3HOYK 5FLMC 1K83K 2CW0A 5IYDC 3S1NK 3HOVC 3GTQC 2NVYC 4BY7C 4A3KK 2JA5K 1ZYRA 1TWCC 4A3BC 1I6HC 4A3FK 4G7OA 3S1MK 3GTJK 3HOYC 3H0GC 1I50K 5IP9C 1TWFC 4OIRA 3HOXK 1K83C 3S14K 4A3KC 1TWAK 4BBRK 2PMZL 2NVXK 2O5IA 3S1MC 4A3EK 3HOWK 3GTJC 5TMFA 4C3IK 2JA7K 3HOUK 3S15K 3HOXC 2A69A 5IYDK 5M3FK 3HOVK 2B63K 1TWHK 2NVYK 4BXXC 1BDFA 1TWAC 4KN7A 4BBRC 4Q4ZA 4A3BK 2NVXC 3HOWC 3H3VL 4C3HK 4Y7NK 2JA7C 2WAQL 4C3IC 3HOUC 4BBSC 3H0GK 4A3CK 3M4OK 3HOZK 4OIPA 2PPBA 3S17C 4XLNA 2B63C 4A3DK 1TWHC 5M5XK 4A3LC 4OIQA 2R7ZC 4C3HC 4Y7NC 4A3CC 1SFOK 5FJ8K 4X6AC 2A6HA 2NVQC 1IW7A 3M4OC 1YNNA 4GZYA 3HOZC 4MEYA 4BY1K 4A3DC 4A93K 3GTLK 5TMCA 3S2DK 2PMZD 4BXXK 3WODA 3S1QK 4AYBL 5M3MK 2WB1D 2PA8D 5C4XK 1SFOC 4BBSK 3RZOK 5C4JC 3HKZL 4BY1C 4OINA 5IP7C 4A93C 4C2MK 2Y0SL 3GTLC 3GTGC 3S2DC 2YU9K 3S16K 4A3IK 4YG2A 3S1QC 4G7ZA 4QIWL 4LK1A 2VUMK 1XPPA 3GTOK 4Q5SA 4XSXA 3M3YK 5C4XC 4YFKA 2R7ZK 1I6VA 4A3JK 4KN4A 4X6AK 2NVQK 2E2JC 3RZOC 3K7AC 3RZDK 2NVTC 2JA6K 3S16C 4LK0A 4C2MC 2YU9C 1TWGK 1SMYA 4A3IC 4Y52C 3GTOC 3S15C 2VUMC 4MQ9A 4YFNA 3M3YC 4KMUA 5IYCK 4A3MK 4QJVA 4A3JC 2JA6C 3RZDC 2E2HC 5C4JK 4ZH4A 4A3LK 5IP7K 1TWGC 3I4MC 3FKIK 2O5JA 3GTGK 2R92K 4YFXA 3CQZK 5D4DA 1I3QK 5IYCC 4A3MC 1R9TK 1Y1WK 1HQMA 3PO2K 2E2JK 3K7AK 2NVTK 3FKIC 4QIWD 3PO3K 3DXJA 2R92C 3CQZC 3H3VD 4Y52K 1I3QC 2WAQD 4XLPA 5C3EK 1R9TC 2JA8K 1Y1WC 1WCMK 3GTPK 3GTMK 1YNJA 3PO2C 3GTKC 2E2HK 4XSZA 5M5WK 3I4NK 3S2HK 3PO3C 3S2HC 3I4MK 1Y1VK 3S1NC 4JK1A 5C3EC 5C44K 2JA8C 4OIOA 2JA5C 1WCMC
chains in the Genus database with same CATH superfamily
4A3GK 2E2IK 2KQ1A 2NVXA 4AYBD 1Y1VC 2JA7A 4KB4A 3LPXA 1L0WA 2CFAB 3G4AA 1ISEA 1USOA 4LLGA 4A3EC 5IYBC 3L4JA 4C3JC 4LJZA 1HI9A 5IP9K 5FLMC 3HOVC 2ZJPS 3G4CA 3LAPA 1I6HC 5JFEA 1EK8A 4WCES 3GTJK 3HOYC 4OIRA 2EBBA 1SFOA 3GDZA 4KC6A 4C45A 4BBRK 1XZQA 2NVXK 4XCHA 2O5IA 4A3EK 3HOWK 2JA7K 1XXAA 5M3FK 3HOVK 2B63K 4RMFA 1TWHK 4BXXC 1DCPA 3AD7C 3H3VL 3IPJA 4Y7NK 5HL8A 4C3IC 3JSTA 4A3CK 2R7ZA 4WF9S 3HOZK 2PPBA 4IO9S 4A3LC 4P5BA 2R7ZC 1SFOK 4GTFA 5IOSA 3M4OC 3BP3A 5E68A 4A3DC 4A93K 5TJ3A 2PMZD 4BXXK 3WODA 1V5VA 3GTGA 5EGHA 4LQYA 2WB1D 5C4XK 3LYWA 4PABA 1JOEA 1Y1WA 5C4JC 4BY1C 3ADAC 4C2MK 3GTGC 3S2DC 1WQHA 3GEEA 1XZPB 2VUMK 3GEIA 4A3LK 4Q5SA 4YFKA 2R7ZK 4A3JK 1WCMA 3RZDK 2NVTC 4KDDA 1EFWA 2YU9C 1SMYA 2FQOA 1O29A 4KMUA 5IYCK 1ZXOA 5C4JK 4ZH4A 4BKWA 3CF5S 1C0AA 3GTGK 2R92K 4GFQA 4A3MC 1Y1WK 4AH6A 1HQMA 3GTQA 3AH5A 2P5MA 2NVTK 3DXJA 3FOFA 3CQZC 4XLPA 4KM9A 4G0UA 1WCMK 3GTMK 3PO2C 4BLBA 3HXAA 4GTBA 3QX3A 1INNA 3PO3C 3S2HC 4P9SA 3S1NC 1EI6A 2JA8C 4KASA 3L4KA 2A6EA 3S1RK 2E2IA 4QJVB 1WQFA 4GTDA 3S14C 5C44C 3GTPC 1IS1A 1O2FB 3GTQK 2NVYA 3FHZA 4LOWA 4A3GC 2E2IC 4G7HA 3S2HK 1TWFK 3T00A 3S1NK 2CW0A 5IYDC 1BS2A 2RGRA 2NVYC 1F9NA 1DD5A 3FOEA 4G7OA 1UV7A 5IP9C 1AB4A 3GTJA 3S14K 3TFJA 1PJ7A 3GTJC 3AQOA 1IL2A 1WIHA 2A69A 5IYDK 2NVYK 2B63A 4WFNS 4BBRC 1TWHA 2ZJQS 2NVXC 3HOWC 4LR2A 4C3HK 5DM6S 2JA7C 2WAQL 4BBSC 4XLNA 2B63C 1F93A 1TWHC 1XXBA 2Y3PA 4Y7NC 1PJ5A 4A3CC 4X6AC 2NVQC 1EQRA 3HOZC 4WILA 1X31C 3S1QK 4G0WA 4AYBL 1WOOA 2PA8D 1JQWA 1KQ4A 1SFOC 4BBSK 2GSNA 4A93C 4A3IK 3VA7A 3GTOK 4GTEA 5IOTA 3M3YK 4XSXA 2VUMA 5C4XC 2KWAA 3OPFA 1B4AA 4X6AK 2NVQK 3K7AC 4C2MC 2VUMC 1IBAA 4G0VA 4FZBA 4A3JC 3RZDC 2CFAA 1O26A 4KM8A 1J6XA 5D4DA 2R93A 2R92A 5IYCC 5IORA 3PIPS 1F7UA 3K7AK 3GTKA 2R92C 5JVGS 2V6TA 5C3EK 2XCRB 1K83A 1Y1WC 3SZYA 3GTKC 3GTMA 4XSZA 5M5WK 3I4NK 4GTLA 3NUHA 1WCMC 1DCOA 2KXYA 3GTMC 1TWAA 2PHCB 5JVOA 2V6SA 2WB1L 3A8IA 2R93K 4NOIA 4WJ4A 1O2AA 1WORA 4ILDA 4BY7K 3HKZD 1TWCK 2BE5A 2Y0SD 3GTKK 3N0CA 5JVHS 3S1RC 3BP8C 4WJ3M 1WSVA 5M5YK 4WFAS 1K83K 3GSIA 1TWFA 3GTQC 4A3KK 4P5AA 1ZYRA 4A3BC 1O2BA 3T01A 3S1MK 1TWFC 3HOXK 3TFIA 1TWAK 3GTLA 3HOUK 1DCHA 5HQHA 1XZPA 2GAGC 4O2DA 4KN7A 4Q4ZA 4A3BK 4GT9A 1WSRA 1G51A 1GE9A 3S17C 2JA6A 3ERED 2RH6A 4C3HC 1IW7A 1YNNA 4KB2A 4MEYA 1YX2A 3GTLK 3FKIA 1RU0A 2XCOA 4GTAA 4PAAA 3RZOK 1XZQB 4WFBS 4FM9A 5HL7S 3S16K 3S17K 3T02A 5EGEA 4BLAA 3S1QC 4G7ZA 4QIWL 3S15K 2ZUEA 3GTOA 1VRQC 1BJTA 1J6VA 2JA6K 2KPUA 4LK0A 2E2HA 1TWGK 3CAGA 4A3IC 3GTOC 4MQ9A 3M3YC 2GSOA 3PIOS 2FQTA 4QJVA 2E2HC 3S0XA 3I4MC 3FKIK 4U67S 2O5JA 4YFXA 4IOAS 5CJ9A 1I3QK 2P8TA 3AQPA 1R9TK 5IOQA 4KARA 2GSUA 3GEHA 3H3VD 3GIRA 3N3YA 2ZUFA 4GTCA 1F7VA 1YNJA 2JA5A 4DDQA 2E2HK 3I4MK 2L3UA 1Y1VK 4JK1A 1I50A 2GAHC 5C3EC 4KMHA 1IE0A 4OIOA 2JA5C 4A3FC 2A68A 4MEXA 5IYBK 2ZJRS 3TFHA 3I4NC 3V4GA 1YCLA 1I50C 1EH1A 2PA8L 4C3JK 5FLMK 1ZBSA 1O28A 1I6HK 1WOPA 1BGWA 1TWCA 3EQLA 3HOYK 5DM7S 2R93C 3H0GA 1J6WA 4BY7C 2JA5K 1TWCC 4A3FK 2XCQA 4KAWX 3H0GC 1USMA 1I50K 1WQGA 1K83C 4J3NA 4A3KC 1O24A 1FEUA 2PMZL 3S1MC 5TMFA 4C3IK 5L46A 3HOXC 1WOSA 3OREA 3AD9C 2YU9A 1BDFA 1TWAC 1XXCA 3N0BA 3HOUC 3DLLS 3H0GK 3BUEA 3M4OK 3OEPA 4OIPA 4A3DK 3LAJA 2V6UA 5M5XK 1IQ0A 4OIQA 3MMLB 5CHPA 5FJ8K 2A6HA 4GZYA 4BY1K 1PJ6A 4M1XA 5TMCA 3S2DK 3SZZA 3CQZA 5M3MK 1VH2A 3HKZL 2ZFZA 4OINA 5IP7C 1B4BA 1VJEA 2Y0SL 3GTLC 4KMAA 2YU9K 4YG2A 4LK1A 1XPPA 2D6FC 2L5NA 3AD8C 1I6VA 4KN4A 2E2JC 3RZOC 1O27A 3S16C 4Y52C 3S15C 1JVIA 1TWGA 4YFNA 3Q3QA 4A3MK 3GTPA 4KMDA 2JA6C 1O25A 1VLOA 5IP7K 4IOCS 1TWGC 3CQZK 1I3QA 3TTGA 1R9TA 1VGXA 1ZVUA 3PO2K 1J98A 2E2JK 3FKIC 4QIWD 3PO3K 3A8KA 4Y52K 1I3QC 2JH3A 2WAQD 1R9TC 3A8JA 2JA8K 2W7VA 4KATA 1ZQ1C 1Y1VA 5C44K 3GTPK
chains in the Genus database with same CATH topology
3GTMC 4A3FC 4A3GK 2A68A 4MEXA 2A6EA 5IYBK 2E2IK 3I4NC 3S1RK 4AYBD 1I50C 2PA8L 1Y1VC 2WB1L 4QJVB 4C3JK 4NOIA 3S17K 3S14C 5FLMK 5C44C 3GTPC 2R93K 3GTQK 4BY7K 4LLGA 3HKZD 1TWCK 2BE5A 4A3GC 2Y0SD 3GTKK 1I6HK 4A3EC 5IYBC 2E2IC 4G7HA 3S1RC 3EQLA 4C3JC 4LJZA 2R93C 5IP9K 1TWFK 5M5YK 3HOYK 5FLMC 1K83K 2CW0A 5IYDC 3S1NK 3HOVC 3GTQC 2NVYC 4BY7C 4A3KK 2JA5K 1ZYRA 1TWCC 4A3BC 1I6HC 4A3FK 4G7OA 3S1MK 3GTJK 3HOYC 3H0GC 1I50K 5IP9C 1TWFC 4OIRA 3HOXK 1K83C 3S14K 4A3KC 1TWAK 4BBRK 2PMZL 2NVXK 2O5IA 3S1MC 4A3EK 3HOWK 3GTJC 5TMFA 4C3IK 2JA7K 3HOUK 3S15K 3HOXC 2A69A 5IYDK 5M3FK 3HOVK 2B63K 1TWHK 2NVYK 4BXXC 1BDFA 1TWAC 4KN7A 4BBRC 4Q4ZA 4A3BK 2NVXC 3HOWC 3H3VL 4C3HK 4Y7NK 2JA7C 2WAQL 4C3IC 3HOUC 4BBSC 3H0GK 4A3CK 3M4OK 3HOZK 4OIPA 2PPBA 3S17C 4XLNA 2B63C 4A3DK 1TWHC 5M5XK 4A3LC 4OIQA 2R7ZC 4C3HC 4Y7NC 4A3CC 1SFOK 5FJ8K 4X6AC 2A6HA 2NVQC 1IW7A 3M4OC 1YNNA 4GZYA 3HOZC 4MEYA 4BY1K 4A3DC 4A93K 3GTLK 5TMCA 3S2DK 2PMZD 4BXXK 3WODA 3S1QK 4AYBL 5M3MK 2WB1D 2PA8D 5C4XK 1SFOC 4BBSK 3RZOK 5C4JC 3HKZL 4BY1C 4OINA 5IP7C 4A93C 4C2MK 2Y0SL 3GTLC 3GTGC 3S2DC 2YU9K 3S16K 4A3IK 4YG2A 3S1QC 4G7ZA 4QIWL 4LK1A 2VUMK 1XPPA 3GTOK 4Q5SA 4XSXA 3M3YK 5C4XC 4YFKA 2R7ZK 1I6VA 4A3JK 4KN4A 4X6AK 2NVQK 2E2JC 3RZOC 3K7AC 3RZDK 2NVTC 2JA6K 3S16C 4LK0A 4C2MC 2YU9C 1TWGK 1SMYA 4A3IC 4Y52C 3GTOC 3S15C 2VUMC 4MQ9A 4YFNA 3M3YC 4KMUA 5IYCK 4A3MK 4QJVA 4A3JC 2JA6C 3RZDC 2E2HC 5C4JK 4ZH4A 4A3LK 5IP7K 1TWGC 3I4MC 3FKIK 2O5JA 3GTGK 2R92K 4YFXA 3CQZK 5D4DA 1I3QK 5IYCC 4A3MC 1R9TK 1Y1WK 1HQMA 3PO2K 2E2JK 3K7AK 2NVTK 3FKIC 4QIWD 3PO3K 3DXJA 2R92C 3CQZC 3H3VD 4Y52K 1I3QC 2WAQD 4XLPA 5C3EK 1R9TC 2JA8K 1Y1WC 1WCMK 3GTPK 3GTMK 1YNJA 3PO2C 3GTKC 2E2HK 4XSZA 5M5WK 3I4NK 3S2HK 3PO3C 3S2HC 3I4MK 1Y1VK 3S1NC 4JK1A 5C3EC 5C44K 2JA8C 4OIOA 2JA5C 1WCMC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3GTM C;  4A3F C;  4A3G K;  2A68 A;  4MEX A;  2A6E A;  5IYB K;  2E2I K;  3I4N C;  3S1R K;  4AYB D;  1I50 C;  2PA8 L;  1Y1V C;  2WB1 L;  4QJV B;  4C3J K;  4NOI A;  3S17 K;  3S14 C;  5FLM K;  5C44 C;  3GTP C;  2R93 K;  3GTQ K;  4BY7 K;  4LLG A;  3HKZ D;  1TWC K;  2BE5 A;  4A3G C;  2Y0S D;  3GTK K;  1I6H K;  4A3E C;  5IYB C;  2E2I C;  4G7H A;  3S1R C;  3EQL A;  4C3J C;  4LJZ A;  2R93 C;  5IP9 K;  1TWF K;  5M5Y K;  3HOY K;  5FLM C;  1K83 K;  2CW0 A;  5IYD C;  3S1N K;  3HOV C;  3GTQ C;  2NVY C;  4BY7 C;  4A3K K;  2JA5 K;  1ZYR A;  1TWC C;  4A3B C;  1I6H C;  4A3F K;  4G7O A;  3S1M K;  3GTJ K;  3HOY C;  3H0G C;  1I50 K;  5IP9 C;  1TWF C;  4OIR A;  3HOX K;  1K83 C;  3S14 K;  4A3K C;  1TWA K;  4BBR K;  2PMZ L;  2NVX K;  2O5I A;  3S1M C;  4A3E K;  3HOW K;  3GTJ C;  5TMF A;  4C3I K;  2JA7 K;  3HOU K;  3S15 K;  3HOX C;  2A69 A;  5IYD K;  5M3F K;  3HOV K;  2B63 K;  1TWH K;  2NVY K;  4BXX C;  1BDF A;  1TWA C;  4KN7 A;  4BBR C;  4Q4Z A;  4A3B K;  2NVX C;  3HOW C;  3H3V L;  4C3H K;  4Y7N K;  2JA7 C;  2WAQ L;  4C3I C;  3HOU C;  4BBS C;  3H0G K;  4A3C K;  3M4O K;  3HOZ K;  4OIP A;  2PPB A;  3S17 C;  4XLN A;  2B63 C;  4A3D K;  1TWH C;  5M5X K;  4A3L C;  4OIQ A;  2R7Z C;  4C3H C;  4Y7N C;  4A3C C;  1SFO K;  5FJ8 K;  4X6A C;  2A6H A;  2NVQ C;  1IW7 A;  3M4O C;  1YNN A;  4GZY A;  3HOZ C;  4MEY A;  4BY1 K;  4A3D C;  4A93 K;  3GTL K;  5TMC A;  3S2D K;  2PMZ D;  4BXX K;  3WOD A;  3S1Q K;  4AYB L;  5M3M K;  2WB1 D;  2PA8 D;  5C4X K;  1SFO C;  4BBS K;  3RZO K;  5C4J C;  3HKZ L;  4BY1 C;  4OIN A;  5IP7 C;  4A93 C;  4C2M K;  2Y0S L;  3GTL C;  3GTG C;  3S2D C;  2YU9 K;  3S16 K;  4A3I K;  4YG2 A;  3S1Q C;  4G7Z A;  4QIW L;  4LK1 A;  2VUM K;  1XPP A;  3GTO K;  4Q5S A;  4XSX A;  3M3Y K;  5C4X C;  4YFK A;  2R7Z K;  1I6V A;  4A3J K;  4KN4 A;  4X6A K;  2NVQ K;  2E2J C;  3RZO C;  3K7A C;  3RZD K;  2NVT C;  2JA6 K;  3S16 C;  4LK0 A;  4C2M C;  2YU9 C;  1TWG K;  1SMY A;  4A3I C;  4Y52 C;  3GTO C;  3S15 C;  2VUM C;  4MQ9 A;  4YFN A;  3M3Y C;  4KMU A;  5IYC K;  4A3M K;  4QJV A;  4A3J C;  2JA6 C;  3RZD C;  2E2H C;  5C4J K;  4ZH4 A;  4A3L K;  5IP7 K;  1TWG C;  3I4M C;  3FKI K;  2O5J A;  3GTG K;  2R92 K;  4YFX A;  3CQZ K;  5D4D A;  1I3Q K;  5IYC C;  4A3M C;  1R9T K;  1Y1W K;  1HQM A;  3PO2 K;  2E2J K;  3K7A K;  2NVT K;  3FKI C;  4QIW D;  3PO3 K;  3DXJ A;  2R92 C;  3CQZ C;  3H3V D;  4Y52 K;  1I3Q C;  2WAQ D;  4XLP A;  5C3E K;  1R9T C;  2JA8 K;  1Y1W C;  1WCM K;  3GTP K;  3GTM K;  1YNJ A;  3PO2 C;  3GTK C;  2E2H K;  4XSZ A;  5M5W K;  3I4N K;  3S2H K;  3PO3 C;  3S2H C;  3I4M K;  1Y1V K;  3S1N C;  4JK1 A;  5C3E C;  5C44 K;  2JA8 C;  4OIO A;  2JA5 C;  1WCM C; 
#chains in the Genus database with same CATH topology
 4A3G K;  2E2I K;  2KQ1 A;  2NVX A;  4AYB D;  1Y1V C;  2JA7 A;  4KB4 A;  3LPX A;  1L0W A;  2CFA B;  3G4A A;  1ISE A;  1USO A;  4LLG A;  4A3E C;  5IYB C;  3L4J A;  4C3J C;  4LJZ A;  1HI9 A;  5IP9 K;  5FLM C;  3HOV C;  2ZJP S;  3G4C A;  3LAP A;  1I6H C;  5JFE A;  1EK8 A;  4WCE S;  3GTJ K;  3HOY C;  4OIR A;  2EBB A;  1SFO A;  3GDZ A;  4KC6 A;  4C45 A;  4BBR K;  1XZQ A;  2NVX K;  4XCH A;  2O5I A;  4A3E K;  3HOW K;  2JA7 K;  1XXA A;  5M3F K;  3HOV K;  2B63 K;  4RMF A;  1TWH K;  4BXX C;  1DCP A;  3AD7 C;  3H3V L;  3IPJ A;  4Y7N K;  5HL8 A;  4C3I C;  3JST A;  4A3C K;  2R7Z A;  4WF9 S;  3HOZ K;  2PPB A;  4IO9 S;  4A3L C;  4P5B A;  2R7Z C;  1SFO K;  4GTF A;  5IOS A;  3M4O C;  3BP3 A;  5E68 A;  4A3D C;  4A93 K;  5TJ3 A;  2PMZ D;  4BXX K;  3WOD A;  1V5V A;  3GTG A;  5EGH A;  4LQY A;  2WB1 D;  5C4X K;  3LYW A;  4PAB A;  1JOE A;  1Y1W A;  5C4J C;  4BY1 C;  3ADA C;  4C2M K;  3GTG C;  3S2D C;  1WQH A;  3GEE A;  1XZP B;  2VUM K;  3GEI A;  4A3L K;  4Q5S A;  4YFK A;  2R7Z K;  4A3J K;  1WCM A;  3RZD K;  2NVT C;  4KDD A;  1EFW A;  2YU9 C;  1SMY A;  2FQO A;  1O29 A;  4KMU A;  5IYC K;  1ZXO A;  5C4J K;  4ZH4 A;  4BKW A;  3CF5 S;  1C0A A;  3GTG K;  2R92 K;  4GFQ A;  4A3M C;  1Y1W K;  4AH6 A;  1HQM A;  3GTQ A;  3AH5 A;  2P5M A;  2NVT K;  3DXJ A;  3FOF A;  3CQZ C;  4XLP A;  4KM9 A;  4G0U A;  1WCM K;  3GTM K;  3PO2 C;  4BLB A;  3HXA A;  4GTB A;  3QX3 A;  1INN A;  3PO3 C;  3S2H C;  4P9S A;  3S1N C;  1EI6 A;  2JA8 C;  4KAS A;  3L4K A;  2A6E A;  3S1R K;  2E2I A;  4QJV B;  1WQF A;  4GTD A;  3S14 C;  5C44 C;  3GTP C;  1IS1 A;  1O2F B;  3GTQ K;  2NVY A;  3FHZ A;  4LOW A;  4A3G C;  2E2I C;  4G7H A;  3S2H K;  1TWF K;  3T00 A;  3S1N K;  2CW0 A;  5IYD C;  1BS2 A;  2RGR A;  2NVY C;  1F9N A;  1DD5 A;  3FOE A;  4G7O A;  1UV7 A;  5IP9 C;  1AB4 A;  3GTJ A;  3S14 K;  3TFJ A;  1PJ7 A;  3GTJ C;  3AQO A;  1IL2 A;  1WIH A;  2A69 A;  5IYD K;  2NVY K;  2B63 A;  4WFN S;  4BBR C;  1TWH A;  2ZJQ S;  2NVX C;  3HOW C;  4LR2 A;  4C3H K;  5DM6 S;  2JA7 C;  2WAQ L;  4BBS C;  4XLN A;  2B63 C;  1F93 A;  1TWH C;  1XXB A;  2Y3P A;  4Y7N C;  1PJ5 A;  4A3C C;  4X6A C;  2NVQ C;  1EQR A;  3HOZ C;  4WIL A;  1X31 C;  3S1Q K;  4G0W A;  4AYB L;  1WOO A;  2PA8 D;  1JQW A;  1KQ4 A;  1SFO C;  4BBS K;  2GSN A;  4A93 C;  4A3I K;  3VA7 A;  3GTO K;  4GTE A;  5IOT A;  3M3Y K;  4XSX A;  2VUM A;  5C4X C;  2KWA A;  3OPF A;  1B4A A;  4X6A K;  2NVQ K;  3K7A C;  4C2M C;  2VUM C;  1IBA A;  4G0V A;  4FZB A;  4A3J C;  3RZD C;  2CFA A;  1O26 A;  4KM8 A;  1J6X A;  5D4D A;  2R93 A;  2R92 A;  5IYC C;  5IOR A;  3PIP S;  1F7U A;  3K7A K;  3GTK A;  2R92 C;  5JVG S;  2V6T A;  5C3E K;  2XCR B;  1K83 A;  1Y1W C;  3SZY A;  3GTK C;  3GTM A;  4XSZ A;  5M5W K;  3I4N K;  4GTL A;  3NUH A;  1WCM C;  1DCO A;  2KXY A;  3GTM C;  1TWA A;  2PHC B;  5JVO A;  2V6S A;  2WB1 L;  3A8I A;  2R93 K;  4NOI A;  4WJ4 A;  1O2A A;  1WOR A;  4ILD A;  4BY7 K;  3HKZ D;  1TWC K;  2BE5 A;  2Y0S D;  3GTK K;  3N0C A;  5JVH S;  3S1R C;  3BP8 C;  4WJ3 M;  1WSV A;  5M5Y K;  4WFA S;  1K83 K;  3GSI A;  1TWF A;  3GTQ C;  4A3K K;  4P5A A;  1ZYR A;  4A3B C;  1O2B A;  3T01 A;  3S1M K;  1TWF C;  3HOX K;  3TFI A;  1TWA K;  3GTL A;  3HOU K;  1DCH A;  5HQH A;  1XZP A;  2GAG C;  4O2D A;  4KN7 A;  4Q4Z A;  4A3B K;  4GT9 A;  1WSR A;  1G51 A;  1GE9 A;  3S17 C;  2JA6 A;  3ERE D;  2RH6 A;  4C3H C;  1IW7 A;  1YNN A;  4KB2 A;  4MEY A;  1YX2 A;  3GTL K;  3FKI A;  1RU0 A;  2XCO A;  4GTA A;  4PAA A;  3RZO K;  1XZQ B;  4WFB S;  4FM9 A;  5HL7 S;  3S16 K;  3S17 K;  3T02 A;  5EGE A;  4BLA A;  3S1Q C;  4G7Z A;  4QIW L;  3S15 K;  2ZUE A;  3GTO A;  1VRQ C;  1BJT A;  1J6V A;  2JA6 K;  2KPU A;  4LK0 A;  2E2H A;  1TWG K;  3CAG A;  4A3I C;  3GTO C;  4MQ9 A;  3M3Y C;  2GSO A;  3PIO S;  2FQT A;  4QJV A;  2E2H C;  3S0X A;  3I4M C;  3FKI K;  4U67 S;  2O5J A;  4YFX A;  4IOA S;  5CJ9 A;  1I3Q K;  2P8T A;  3AQP A;  1R9T K;  5IOQ A;  4KAR A;  2GSU A;  3GEH A;  3H3V D;  3GIR A;  3N3Y A;  2ZUF A;  4GTC A;  1F7V A;  1YNJ A;  2JA5 A;  4DDQ A;  2E2H K;  3I4M K;  2L3U A;  1Y1V K;  4JK1 A;  1I50 A;  2GAH C;  5C3E C;  4KMH A;  1IE0 A;  4OIO A;  2JA5 C;  4A3F C;  2A68 A;  4MEX A;  5IYB K;  2ZJR S;  3TFH A;  3I4N C;  3V4G A;  1YCL A;  1I50 C;  1EH1 A;  2PA8 L;  4C3J K;  5FLM K;  1ZBS A;  1O28 A;  1I6H K;  1WOP A;  1BGW A;  1TWC A;  3EQL A;  3HOY K;  5DM7 S;  2R93 C;  3H0G A;  1J6W A;  4BY7 C;  2JA5 K;  1TWC C;  4A3F K;  2XCQ A;  4KAW X;  3H0G C;  1USM A;  1I50 K;  1WQG A;  1K83 C;  4J3N A;  4A3K C;  1O24 A;  1FEU A;  2PMZ L;  3S1M C;  5TMF A;  4C3I K;  5L46 A;  3HOX C;  1WOS A;  3ORE A;  3AD9 C;  2YU9 A;  1BDF A;  1TWA C;  1XXC A;  3N0B A;  3HOU C;  3DLL S;  3H0G K;  3BUE A;  3M4O K;  3OEP A;  4OIP A;  4A3D K;  3LAJ A;  2V6U A;  5M5X K;  1IQ0 A;  4OIQ A;  3MML B;  5CHP A;  5FJ8 K;  2A6H A;  4GZY A;  4BY1 K;  1PJ6 A;  4M1X A;  5TMC A;  3S2D K;  3SZZ A;  3CQZ A;  5M3M K;  1VH2 A;  3HKZ L;  2ZFZ A;  4OIN A;  5IP7 C;  1B4B A;  1VJE A;  2Y0S L;  3GTL C;  4KMA A;  2YU9 K;  4YG2 A;  4LK1 A;  1XPP A;  2D6F C;  2L5N A;  3AD8 C;  1I6V A;  4KN4 A;  2E2J C;  3RZO C;  1O27 A;  3S16 C;  4Y52 C;  3S15 C;  1JVI A;  1TWG A;  4YFN A;  3Q3Q A;  4A3M K;  3GTP A;  4KMD A;  2JA6 C;  1O25 A;  1VLO A;  5IP7 K;  4IOC S;  1TWG C;  3CQZ K;  1I3Q A;  3TTG A;  1R9T A;  1VGX A;  1ZVU A;  3PO2 K;  1J98 A;  2E2J K;  3FKI C;  4QIW D;  3PO3 K;  3A8K A;  4Y52 K;  1I3Q C;  2JH3 A;  2WAQ D;  1R9T C;  3A8J A;  2JA8 K;  2W7V A;  4KAT A;  1ZQ1 C;  1Y1V A;  5C44 K;  3GTP K; 
#chains in the Genus database with same CATH homology
 3GTM C;  4A3F C;  4A3G K;  2A68 A;  4MEX A;  2A6E A;  5IYB K;  2E2I K;  3I4N C;  3S1R K;  4AYB D;  1I50 C;  2PA8 L;  1Y1V C;  2WB1 L;  4QJV B;  4C3J K;  4NOI A;  3S17 K;  3S14 C;  5FLM K;  5C44 C;  3GTP C;  2R93 K;  3GTQ K;  4BY7 K;  4LLG A;  3HKZ D;  1TWC K;  2BE5 A;  4A3G C;  2Y0S D;  3GTK K;  1I6H K;  4A3E C;  5IYB C;  2E2I C;  4G7H A;  3S1R C;  3EQL A;  4C3J C;  4LJZ A;  2R93 C;  5IP9 K;  1TWF K;  5M5Y K;  3HOY K;  5FLM C;  1K83 K;  2CW0 A;  5IYD C;  3S1N K;  3HOV C;  3GTQ C;  2NVY C;  4BY7 C;  4A3K K;  2JA5 K;  1ZYR A;  1TWC C;  4A3B C;  1I6H C;  4A3F K;  4G7O A;  3S1M K;  3GTJ K;  3HOY C;  3H0G C;  1I50 K;  5IP9 C;  1TWF C;  4OIR A;  3HOX K;  1K83 C;  3S14 K;  4A3K C;  1TWA K;  4BBR K;  2PMZ L;  2NVX K;  2O5I A;  3S1M C;  4A3E K;  3HOW K;  3GTJ C;  5TMF A;  4C3I K;  2JA7 K;  3HOU K;  3S15 K;  3HOX C;  2A69 A;  5IYD K;  5M3F K;  3HOV K;  2B63 K;  1TWH K;  2NVY K;  4BXX C;  1BDF A;  1TWA C;  4KN7 A;  4BBR C;  4Q4Z A;  4A3B K;  2NVX C;  3HOW C;  3H3V L;  4C3H K;  4Y7N K;  2JA7 C;  2WAQ L;  4C3I C;  3HOU C;  4BBS C;  3H0G K;  4A3C K;  3M4O K;  3HOZ K;  4OIP A;  2PPB A;  3S17 C;  4XLN A;  2B63 C;  4A3D K;  1TWH C;  5M5X K;  4A3L C;  4OIQ A;  2R7Z C;  4C3H C;  4Y7N C;  4A3C C;  1SFO K;  5FJ8 K;  4X6A C;  2A6H A;  2NVQ C;  1IW7 A;  3M4O C;  1YNN A;  4GZY A;  3HOZ C;  4MEY A;  4BY1 K;  4A3D C;  4A93 K;  3GTL K;  5TMC A;  3S2D K;  2PMZ D;  4BXX K;  3WOD A;  3S1Q K;  4AYB L;  5M3M K;  2WB1 D;  2PA8 D;  5C4X K;  1SFO C;  4BBS K;  3RZO K;  5C4J C;  3HKZ L;  4BY1 C;  4OIN A;  5IP7 C;  4A93 C;  4C2M K;  2Y0S L;  3GTL C;  3GTG C;  3S2D C;  2YU9 K;  3S16 K;  4A3I K;  4YG2 A;  3S1Q C;  4G7Z A;  4QIW L;  4LK1 A;  2VUM K;  1XPP A;  3GTO K;  4Q5S A;  4XSX A;  3M3Y K;  5C4X C;  4YFK A;  2R7Z K;  1I6V A;  4A3J K;  4KN4 A;  4X6A K;  2NVQ K;  2E2J C;  3RZO C;  3K7A C;  3RZD K;  2NVT C;  2JA6 K;  3S16 C;  4LK0 A;  4C2M C;  2YU9 C;  1TWG K;  1SMY A;  4A3I C;  4Y52 C;  3GTO C;  3S15 C;  2VUM C;  4MQ9 A;  4YFN A;  3M3Y C;  4KMU A;  5IYC K;  4A3M K;  4QJV A;  4A3J C;  2JA6 C;  3RZD C;  2E2H C;  5C4J K;  4ZH4 A;  4A3L K;  5IP7 K;  1TWG C;  3I4M C;  3FKI K;  2O5J A;  3GTG K;  2R92 K;  4YFX A;  3CQZ K;  5D4D A;  1I3Q K;  5IYC C;  4A3M C;  1R9T K;  1Y1W K;  1HQM A;  3PO2 K;  2E2J K;  3K7A K;  2NVT K;  3FKI C;  4QIW D;  3PO3 K;  3DXJ A;  2R92 C;  3CQZ C;  3H3V D;  4Y52 K;  1I3Q C;  2WAQ D;  4XLP A;  5C3E K;  1R9T C;  2JA8 K;  1Y1W C;  1WCM K;  3GTP K;  3GTM K;  1YNJ A;  3PO2 C;  3GTK C;  2E2H K;  4XSZ A;  5M5W K;  3I4N K;  3S2H K;  3PO3 C;  3S2H C;  3I4M K;  1Y1V K;  3S1N C;  4JK1 A;  5C3E C;  5C44 K;  2JA8 C;  4OIO A;  2JA5 C;  1WCM C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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