3HOVC

Complete rna polymerase ii elongation complex ii
Total Genus 52
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
52
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural basis of transcription: mismatch-specific fidelity mechanisms and paused RNA polymerase II with frayed RNA.
pubmed doi rcsb
molecule tags Transcription, transferase/dna/rna
molecule keywords DNA-directed RNA polymerase II subunit RPB1
total genus 52
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2009-06-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3hovC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3hovC01
4YFXA 4A3GK 2E2HC 4A3BK 3CQZC 3HKZL 4BY7K 3EQLA 4A3DK 4XSXA 3I4MC 4Y7NK 4OIRA 3HOYC 1K83C 3RZDC 2NVQC 2NVXK 5C44C 2YU9K 5FLMC 4A3JK 4BY1C 3S1QC 4C3IK 2R92C 1I6HC 1SFOK 4KMUA 3PO2K 4A3EK 1IW7A 3DXJA 2A69A 4OIPA 3GTGC 5IYCK 4Y52K 3S16C 4BBRC 2NVYC 5IP7C 3FKIC 1TWGC 5IYDC 3S2HC 4QIWL 3S14K 2JA7K 2NVTK 4C3HK 5TMFA 4YFNA 1TWFK 5C3EC 3PO3C 3S15C 2WAQD 3S1NC 2JA6C 4OIOA 5IP9K 5M5WK 2PMZL 4A3MK 2PPBA 2E2IK 2WB1D 4C3JK 3S1MK 1I3QK 4A3IK 3HOZC 2R7ZK 4QJVA 2A6HA 4A3KC 2E2JK 4JK1A 4G7OA 1WCMK 3K7AK 3S17C 2PA8L 4BBSK 3GTJK 1TWCK 3H0GK 4A3LC 4KN7A 3GTQK 4A3FK 2PMZD 4XLNA 3RZOC 3GTOK 4X6AK 1TWHC 5D4DA 3HOUK 4A93C 2JA5K 3WODA 5TMCA 1R9TC 1Y1WC 3M4OK 4YG2A 4MEXA 5M5XK 4XLPA 3S2DK 1XPPA 4A3CC 5M5YK 4C2MC 2Y0SD 4AYBL 2A68A 5C4XC 1I50C 1TWCC 3GTLC 2JA8C 3I4NC 4A3GC 1TWAK 4A3BC 5C4JK 2E2HK 2VUMK 4QIWD 2BE5A 4A3DC 1Y1VC 2NVXC 4Y7NC 3H3VD 3HOYK 1K83K 5IYBK 3RZDK 2NVQK 3GTPK 3I4MK 2R93C 4C3IC 2B63C 3HOVC 3GTMK 4BXXC 1SFOC 3PO2C 3GTKK 1I6HK 3HOWC 4A3EC 2WB1L 4Q4ZA 4Y52C 2A6EA 5IYCC 3HOXC 3S14C 5IP7K 1ZYRA 3M3YK 3S1RC 1SMYA 2NVTC 4C3HC 4NOIA 1HQMA 1TWFC 5C3EK 3S1NK 3PO3K 4LK1A 4G7ZA 5IP9C 2PA8D 4BY7C 3CQZK 4A3MC 2E2IC 1I3QC 2YU9C 3HOZK 5C44K 5FLMK 4A3JC 2WAQL 4BY1K 3S1QK 3K7AC 2R92K 3S17K 2Y0SL 3GTJC 3H0GC 3GTGK 5FJ8K 3GTQC 3S16K 4A3LK 4BBRK 2NVYK 4X6AC 3FKIK 1TWGK 3S2HK 5IYDK 3H3VL 2JA7C 1R9TK 1Y1WK 1YNJA 4QJVB 4MEYA 4XSZA 4G7HA 3S15K 3S2DC 2JA6K 5M3MK 5M3FK 4OINA 5C4XK 3GTLK 4C3JC 3S1MC 2JA8K 3I4NK 1TWAC 2VUMC 4A3IC 5C4JC 2R7ZC 4A3KK 4MQ9A 2E2JC 1Y1VK 1WCMC 5IYBC 2O5IA 3GTPC 2O5JA 4OIQA 4LJZA 1BDFA 4BBSC 2R93K 2B63K 3HOVK 1I6VA 4ZH4A 4KN4A 3GTMC 4BXXK 3GTKC 4AYBD 4A3FC 3HOWK 3RZOK 3HKZD 4YFKA 3GTOC 4LK0A 3HOUC 2CW0A 1TWHK 2JA5C 4LLGA 4A93K 3M4OC 3HOXK 3M3YC 1YNNA 3S1RK 4GZYA 4Q5SA 4A3CK 4C2MK 1I50K
chains in the Genus database with same CATH superfamily
1USMA 2E2HC 1YX2A 3HKZL 1F7UA 4BY7K 4A3DK 1IE0A 4OIRA 4Y7NK 3RZDC 2NVQC 1IL2A 2JA7A 2FQOA 1HI9A 3OEPA 4G0VA 4WJ3M 3DXJA 3GTGC 5HL8A 5IP7C 1TWGC 3MMLB 1Y1VA 4GT9A 2V6UA 3GEHA 5C3EC 3PO3C 2ZJRS 2ZFZA 2PMZL 3S1MK 3HOZC 2R7ZK 2A6HA 4JK1A 4G7OA 3K7AK 4BBSK 1I3QA 4KN7A 2GSUA 2D6FC 4XLNA 1TWHC 3HOUK 1R9TC 3M4OK 4DDQA 2Y3PA 1XPPA 4AYBL 2Y0SD 1I50C 5IOSA 4WFAS 1L0WA 2JA5A 1TWAK 2E2HK 1J6VA 2BE5A 1WOOA 1ZVUA 4A3DC 4GTDA 2NVXC 3RZDK 2NVQK 3GTPK 2XCRB 3SZYA 2R93C 3GTMK 4BXXC 1O2AA 3GTKK 3GDZA 2RGRA 4C3HC 3GTKA 1TWFC 3PO3K 4LK1A 4O2DA 3AQOA 4WJ4A 5C44K 4BY1K 3K7AC 4RMFA 3GTJC 3GTQC 1JQWA 3FKIK 2R92A 1WOSA 1R9TK 1IQ0A 1Y1WK 4G7HA 2CFAA 2JA6K 1VRQC 2JH3A 3I4NK 1TWAC 4A3IC 5E68A 1XZQB 2E2JC 1O2BA 4ILDA 1WORA 3TFIA 5EGHA 4GTEA 4ZH4A 4G0UA 3GTKC 4AYBD 4A3FC 3GTOC 1I50A 4FM9A 2JA5C 3V4GA 2V6TA 3GEEA 3HOXK 2R7ZA 2ZJPS 4GZYA 1XXCA 4A3GK 4P5AA 3CQZC 4IO9S 3L4KA 1WSRA 4XSXA 1ZXOA 3HOYC 4IOAS 1R9TA 5C44C 4LQYA 3BP8C 4GTBA 2JA6A 1I6HC 1SFOK 4KMUA 3PO2K 1PJ6A 1IW7A 2KWAA 2A69A 3S16C 4BBRC 2NVYC 1G51A 3FKIC 3S14K 5JVHS 2JA7K 1XZQA 1BS2A 3S15C 4M1XA 4OIOA 5IP9K 2GSOA 4A3MK 2E2IK 5TJ3A 1DCOA 1I3QK 4GTLA 4A3IK 4QJVA 4A3KC 5JVOA 2E2JK 1WCMK 3H0GK 2PMZD 4X6AK 1O2FB 3GTOK 5D4DA 1WCMA 3GEIA 4A93C 5TMCA 3OREA 4YG2A 4XLPA 3S2DK 5M5YK 1SFOA 5C4XC 1EI6A 3GTGA 2JA8C 4GTFA 5C4JK 3S0XA 1Y1VC 3H3VD 4Y7NC 3T00A 3HOYK 5IYBK 1B4BA 4GTAA 3AD9C 1WSVA 5CHPA 3PIOS 2P8TA 2A6EA 3TFHA 1ZQ1C 5IP7K 3M3YK 1UV7A 1SMYA 4NOIA 5C3EK 1WQFA 2B63A 3GTJA 3GTQA 3ERED 1F93A 2YU9C 3HOZK 3ADAC 5FLMK 2WAQL 3S1QK 1F9NA 3FHZA 4KM8A 3H0GC 4P5BA 2VUMA 4PAAA 5IYDK 2KQ1A 1VJEA 4IOCS 1TWGA 4OINA 4KAWX 3N3YA 4KMDA 4C3JC 3TTGA 4KMAA 1Y1VK 3L4JA 2GSNA 3GTPC 2O5JA 4OIQA 2R93K 3GTMC 4KN4A 4BXXK 1AB4A 3LPXA 3CQZA 4YFKA 3RZOK 1TWCA 4LLGA 3DLLS 3M3YC 1O26A 4Q5SA 4A3CK 2RH6A 4YFXA 2XCQA 3GTOA 3EQLA 3G4AA 3I4MC 1XZPB 1K83C 4XCHA 1WQGA 4BY1C 4LOWA 3GSIA 1EH1A 1EK8A 4A3EK 5IYCK 4OIPA 1WQHA 4G0WA 5IYDC 4QIWL 3FOFA 1ZBSA 2NVTK 2WAQD 4KB4A 5HL7S 2JA6C 1PJ5A 3G4CA 4PABA 5L46A 3SZZA 3N0CA 2WB1D 4C3JK 3H0GA 1V5VA 3LAPA 3IPJA 5IOQA 3S17C 4KASA 4KC6A 1RU0A 3N0BA 4A3LC 4A3FK 2P5MA 3RZOC 1FEUA 4KDDA 1YCLA 1VLOA 4WFNS 3A8KA 2JA5K 3WODA 2YU9A 5M5XK 4A3CC 2A68A 1DCPA 4A3GC 2VUMK 2PHCB 1J6XA 1PJ7A 1BJTA 1USOA 3VA7A 1K83K 2B63C 1IS1A 1SFOC 3PO2C 1I6HK 3HOWC 4A3EC 4Q4ZA 5IYCC 4KB2A 1O29A 3S14C 3CAGA 3S1RC 2NVTC 2W7VA 1HQMA 4G7ZA 2GAGC 5IP9C 2KXYA 4BY7C 4A3MC 2E2IC 5DM7S 4KMHA 1I3QC 3HXAA 4WCES 4A3JC 5IOTA 2R92K 1INNA 2XCOA 4BKWA 4BLAA 2ZUEA 4WF9S 4X6AC 3S2HK 1XZPA 1O28A 3H3VL 4QJVB 4MEYA 3TFJA 3S2DC 5M3MK 3GTMA 3FKIA 4C45A 4KARA 5C4XK 1EQRA 2JA8K 2VUMC 3FOEA 1VGXA 2L3UA 5C4JC 1TWHA 2V6SA 5IYBC 4LR2A 2B63K 1I6VA 4AH6A 3HKZD 4LK0A 1GE9A 3JSTA 3AD8C 3BP3A 1YNNA 3S1RK 3Q3QA 4C2MK 1TWCK 1KQ4A 4GFQA 4A3BK 3GIRA 2ZUFA 2NVXK 2YU9K 4BLBA 5FLMC 4A3JK 3S1QC 1ISEA 4C3IK 2R92C 2CFAB 4Y52K 5EGEA 2E2HA 3CF5S 3S2HC 1B4AA 4C3HK 5TMFA 1BGWA 4YFNA 1TWFK 1F7VA 3S1NC 1JVIA 5M5WK 2PPBA 1XXBA 1WOPA 5HQHA 2KPUA 2PA8L 5JVGS 4WFBS 3GTJK 3GTQK 3A8IA 3OPFA 1Y1WC 3AH5A 4MEXA 4WILA 5CJ9A 1VH2A 1IBAA 4C2MC 3NUHA 1JOEA 1TWCC 3GTLC 1J6WA 3I4NC 4GTCA 4A3BC 1O24A 4FZBA 1XXAA 4QIWD 3I4MK 3AQPA 1TWFA 5IORA 4C3IC 3HOVC 3LYWA 2FQTA 2WB1L 1DD5A 4Y52C 3BUEA 1K83A 3GTPA 3HOXC 1ZYRA 2EBBA 3S1NK 2PA8D 1WIHA 3CQZK 3T01A 3LAJA 2NVYA 2GAHC 3S17K 1Y1WA 5DM6S 2Y0SL 4P9SA 3A8JA 2ZJQS 1X31C 3GTGK 1DCHA 5FJ8K 3S16K 4A3LK 1TWAA 2NVYK 4BBRK 3T02A 1TWGK 3GTLA 1O25A 2NVXA 2JA7C 5JFEA 3QX3A 1YNJA 4XSZA 3S15K 5M3FK 4KM9A 3GTLK 3S1MC 1O27A 1C0AA 3AD7C 2R7ZC 4A3KK 4MQ9A 1WCMC 4J3NA 2O5IA 4KATA 2L5NA 4LJZA 1BDFA 3PIPS 4BBSC 3HOVK 1J98A 2E2IA 3HOWK 3HOUC 2CW0A 4U67S 1TWHK 4A93K 3M4OC 1EFWA 2R93A 1I50K
chains in the Genus database with same CATH topology
4YFXA 4A3GK 2E2HC 4A3BK 3CQZC 3HKZL 4BY7K 3EQLA 4A3DK 4XSXA 3I4MC 4Y7NK 4OIRA 3HOYC 1K83C 3RZDC 2NVQC 2NVXK 5C44C 2YU9K 5FLMC 4A3JK 4BY1C 3S1QC 4C3IK 2R92C 1I6HC 1SFOK 4KMUA 3PO2K 4A3EK 1IW7A 3DXJA 2A69A 4OIPA 3GTGC 5IYCK 4Y52K 3S16C 4BBRC 2NVYC 5IP7C 3FKIC 1TWGC 5IYDC 3S2HC 4QIWL 3S14K 2JA7K 2NVTK 4C3HK 5TMFA 4YFNA 1TWFK 5C3EC 3PO3C 3S15C 2WAQD 3S1NC 2JA6C 4OIOA 5IP9K 5M5WK 2PMZL 4A3MK 2PPBA 2E2IK 2WB1D 4C3JK 3S1MK 1I3QK 4A3IK 3HOZC 2R7ZK 4QJVA 2A6HA 4A3KC 2E2JK 4JK1A 4G7OA 1WCMK 3K7AK 3S17C 2PA8L 4BBSK 3GTJK 1TWCK 3H0GK 4A3LC 4KN7A 3GTQK 4A3FK 2PMZD 4XLNA 3RZOC 3GTOK 4X6AK 1TWHC 5D4DA 3HOUK 4A93C 2JA5K 3WODA 5TMCA 1R9TC 1Y1WC 3M4OK 4YG2A 4MEXA 5M5XK 4XLPA 3S2DK 1XPPA 4A3CC 5M5YK 4C2MC 2Y0SD 4AYBL 2A68A 5C4XC 1I50C 1TWCC 3GTLC 2JA8C 3I4NC 4A3GC 1TWAK 4A3BC 5C4JK 2E2HK 2VUMK 4QIWD 2BE5A 4A3DC 1Y1VC 2NVXC 4Y7NC 3H3VD 3HOYK 1K83K 5IYBK 3RZDK 2NVQK 3GTPK 3I4MK 2R93C 4C3IC 2B63C 3HOVC 3GTMK 4BXXC 1SFOC 3PO2C 3GTKK 1I6HK 3HOWC 4A3EC 2WB1L 4Q4ZA 4Y52C 2A6EA 5IYCC 3HOXC 3S14C 5IP7K 1ZYRA 3M3YK 3S1RC 1SMYA 2NVTC 4C3HC 4NOIA 1HQMA 1TWFC 5C3EK 3S1NK 3PO3K 4LK1A 4G7ZA 5IP9C 2PA8D 4BY7C 3CQZK 4A3MC 2E2IC 1I3QC 2YU9C 3HOZK 5C44K 5FLMK 4A3JC 2WAQL 4BY1K 3S1QK 3K7AC 2R92K 3S17K 2Y0SL 3GTJC 3H0GC 3GTGK 5FJ8K 3GTQC 3S16K 4A3LK 4BBRK 2NVYK 4X6AC 3FKIK 1TWGK 3S2HK 5IYDK 3H3VL 2JA7C 1R9TK 1Y1WK 1YNJA 4QJVB 4MEYA 4XSZA 4G7HA 3S15K 3S2DC 2JA6K 5M3MK 5M3FK 4OINA 5C4XK 3GTLK 4C3JC 3S1MC 2JA8K 3I4NK 1TWAC 2VUMC 4A3IC 5C4JC 2R7ZC 4A3KK 4MQ9A 2E2JC 1Y1VK 1WCMC 5IYBC 2O5IA 3GTPC 2O5JA 4OIQA 4LJZA 1BDFA 4BBSC 2R93K 2B63K 3HOVK 1I6VA 4ZH4A 4KN4A 3GTMC 4BXXK 3GTKC 4AYBD 4A3FC 3HOWK 3RZOK 3HKZD 4YFKA 3GTOC 4LK0A 3HOUC 2CW0A 1TWHK 2JA5C 4LLGA 4A93K 3M4OC 3HOXK 3M3YC 1YNNA 3S1RK 4GZYA 4Q5SA 4A3CK 4C2MK 1I50K
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4YFX A;  4A3G K;  2E2H C;  4A3B K;  3CQZ C;  3HKZ L;  4BY7 K;  3EQL A;  4A3D K;  4XSX A;  3I4M C;  4Y7N K;  4OIR A;  3HOY C;  1K83 C;  3RZD C;  2NVQ C;  2NVX K;  5C44 C;  2YU9 K;  5FLM C;  4A3J K;  4BY1 C;  3S1Q C;  4C3I K;  2R92 C;  1I6H C;  1SFO K;  4KMU A;  3PO2 K;  4A3E K;  1IW7 A;  3DXJ A;  2A69 A;  4OIP A;  3GTG C;  5IYC K;  4Y52 K;  3S16 C;  4BBR C;  2NVY C;  5IP7 C;  3FKI C;  1TWG C;  5IYD C;  3S2H C;  4QIW L;  3S14 K;  2JA7 K;  2NVT K;  4C3H K;  5TMF A;  4YFN A;  1TWF K;  5C3E C;  3PO3 C;  3S15 C;  2WAQ D;  3S1N C;  2JA6 C;  4OIO A;  5IP9 K;  5M5W K;  2PMZ L;  4A3M K;  2PPB A;  2E2I K;  2WB1 D;  4C3J K;  3S1M K;  1I3Q K;  4A3I K;  3HOZ C;  2R7Z K;  4QJV A;  2A6H A;  4A3K C;  2E2J K;  4JK1 A;  4G7O A;  1WCM K;  3K7A K;  3S17 C;  2PA8 L;  4BBS K;  3GTJ K;  1TWC K;  3H0G K;  4A3L C;  4KN7 A;  3GTQ K;  4A3F K;  2PMZ D;  4XLN A;  3RZO C;  3GTO K;  4X6A K;  1TWH C;  5D4D A;  3HOU K;  4A93 C;  2JA5 K;  3WOD A;  5TMC A;  1R9T C;  1Y1W C;  3M4O K;  4YG2 A;  4MEX A;  5M5X K;  4XLP A;  3S2D K;  1XPP A;  4A3C C;  5M5Y K;  4C2M C;  2Y0S D;  4AYB L;  2A68 A;  5C4X C;  1I50 C;  1TWC C;  3GTL C;  2JA8 C;  3I4N C;  4A3G C;  1TWA K;  4A3B C;  5C4J K;  2E2H K;  2VUM K;  4QIW D;  2BE5 A;  4A3D C;  1Y1V C;  2NVX C;  4Y7N C;  3H3V D;  3HOY K;  1K83 K;  5IYB K;  3RZD K;  2NVQ K;  3GTP K;  3I4M K;  2R93 C;  4C3I C;  2B63 C;  3HOV C;  3GTM K;  4BXX C;  1SFO C;  3PO2 C;  3GTK K;  1I6H K;  3HOW C;  4A3E C;  2WB1 L;  4Q4Z A;  4Y52 C;  2A6E A;  5IYC C;  3HOX C;  3S14 C;  5IP7 K;  1ZYR A;  3M3Y K;  3S1R C;  1SMY A;  2NVT C;  4C3H C;  4NOI A;  1HQM A;  1TWF C;  5C3E K;  3S1N K;  3PO3 K;  4LK1 A;  4G7Z A;  5IP9 C;  2PA8 D;  4BY7 C;  3CQZ K;  4A3M C;  2E2I C;  1I3Q C;  2YU9 C;  3HOZ K;  5C44 K;  5FLM K;  4A3J C;  2WAQ L;  4BY1 K;  3S1Q K;  3K7A C;  2R92 K;  3S17 K;  2Y0S L;  3GTJ C;  3H0G C;  3GTG K;  5FJ8 K;  3GTQ C;  3S16 K;  4A3L K;  4BBR K;  2NVY K;  4X6A C;  3FKI K;  1TWG K;  3S2H K;  5IYD K;  3H3V L;  2JA7 C;  1R9T K;  1Y1W K;  1YNJ A;  4QJV B;  4MEY A;  4XSZ A;  4G7H A;  3S15 K;  3S2D C;  2JA6 K;  5M3M K;  5M3F K;  4OIN A;  5C4X K;  3GTL K;  4C3J C;  3S1M C;  2JA8 K;  3I4N K;  1TWA C;  2VUM C;  4A3I C;  5C4J C;  2R7Z C;  4A3K K;  4MQ9 A;  2E2J C;  1Y1V K;  1WCM C;  5IYB C;  2O5I A;  3GTP C;  2O5J A;  4OIQ A;  4LJZ A;  1BDF A;  4BBS C;  2R93 K;  2B63 K;  3HOV K;  1I6V A;  4ZH4 A;  4KN4 A;  3GTM C;  4BXX K;  3GTK C;  4AYB D;  4A3F C;  3HOW K;  3RZO K;  3HKZ D;  4YFK A;  3GTO C;  4LK0 A;  3HOU C;  2CW0 A;  1TWH K;  2JA5 C;  4LLG A;  4A93 K;  3M4O C;  3HOX K;  3M3Y C;  1YNN A;  3S1R K;  4GZY A;  4Q5S A;  4A3C K;  4C2M K;  1I50 K; 
#chains in the Genus database with same CATH topology
 1USM A;  2E2H C;  1YX2 A;  3HKZ L;  1F7U A;  4BY7 K;  4A3D K;  1IE0 A;  4OIR A;  4Y7N K;  3RZD C;  2NVQ C;  1IL2 A;  2JA7 A;  2FQO A;  1HI9 A;  3OEP A;  4G0V A;  4WJ3 M;  3DXJ A;  3GTG C;  5HL8 A;  5IP7 C;  1TWG C;  3MML B;  1Y1V A;  4GT9 A;  2V6U A;  3GEH A;  5C3E C;  3PO3 C;  2ZJR S;  2ZFZ A;  2PMZ L;  3S1M K;  3HOZ C;  2R7Z K;  2A6H A;  4JK1 A;  4G7O A;  3K7A K;  4BBS K;  1I3Q A;  4KN7 A;  2GSU A;  2D6F C;  4XLN A;  1TWH C;  3HOU K;  1R9T C;  3M4O K;  4DDQ A;  2Y3P A;  1XPP A;  4AYB L;  2Y0S D;  1I50 C;  5IOS A;  4WFA S;  1L0W A;  2JA5 A;  1TWA K;  2E2H K;  1J6V A;  2BE5 A;  1WOO A;  1ZVU A;  4A3D C;  4GTD A;  2NVX C;  3RZD K;  2NVQ K;  3GTP K;  2XCR B;  3SZY A;  2R93 C;  3GTM K;  4BXX C;  1O2A A;  3GTK K;  3GDZ A;  2RGR A;  4C3H C;  3GTK A;  1TWF C;  3PO3 K;  4LK1 A;  4O2D A;  3AQO A;  4WJ4 A;  5C44 K;  4BY1 K;  3K7A C;  4RMF A;  3GTJ C;  3GTQ C;  1JQW A;  3FKI K;  2R92 A;  1WOS A;  1R9T K;  1IQ0 A;  1Y1W K;  4G7H A;  2CFA A;  2JA6 K;  1VRQ C;  2JH3 A;  3I4N K;  1TWA C;  4A3I C;  5E68 A;  1XZQ B;  2E2J C;  1O2B A;  4ILD A;  1WOR A;  3TFI A;  5EGH A;  4GTE A;  4ZH4 A;  4G0U A;  3GTK C;  4AYB D;  4A3F C;  3GTO C;  1I50 A;  4FM9 A;  2JA5 C;  3V4G A;  2V6T A;  3GEE A;  3HOX K;  2R7Z A;  2ZJP S;  4GZY A;  1XXC A;  4A3G K;  4P5A A;  3CQZ C;  4IO9 S;  3L4K A;  1WSR A;  4XSX A;  1ZXO A;  3HOY C;  4IOA S;  1R9T A;  5C44 C;  4LQY A;  3BP8 C;  4GTB A;  2JA6 A;  1I6H C;  1SFO K;  4KMU A;  3PO2 K;  1PJ6 A;  1IW7 A;  2KWA A;  2A69 A;  3S16 C;  4BBR C;  2NVY C;  1G51 A;  3FKI C;  3S14 K;  5JVH S;  2JA7 K;  1XZQ A;  1BS2 A;  3S15 C;  4M1X A;  4OIO A;  5IP9 K;  2GSO A;  4A3M K;  2E2I K;  5TJ3 A;  1DCO A;  1I3Q K;  4GTL A;  4A3I K;  4QJV A;  4A3K C;  5JVO A;  2E2J K;  1WCM K;  3H0G K;  2PMZ D;  4X6A K;  1O2F B;  3GTO K;  5D4D A;  1WCM A;  3GEI A;  4A93 C;  5TMC A;  3ORE A;  4YG2 A;  4XLP A;  3S2D K;  5M5Y K;  1SFO A;  5C4X C;  1EI6 A;  3GTG A;  2JA8 C;  4GTF A;  5C4J K;  3S0X A;  1Y1V C;  3H3V D;  4Y7N C;  3T00 A;  3HOY K;  5IYB K;  1B4B A;  4GTA A;  3AD9 C;  1WSV A;  5CHP A;  3PIO S;  2P8T A;  2A6E A;  3TFH A;  1ZQ1 C;  5IP7 K;  3M3Y K;  1UV7 A;  1SMY A;  4NOI A;  5C3E K;  1WQF A;  2B63 A;  3GTJ A;  3GTQ A;  3ERE D;  1F93 A;  2YU9 C;  3HOZ K;  3ADA C;  5FLM K;  2WAQ L;  3S1Q K;  1F9N A;  3FHZ A;  4KM8 A;  3H0G C;  4P5B A;  2VUM A;  4PAA A;  5IYD K;  2KQ1 A;  1VJE A;  4IOC S;  1TWG A;  4OIN A;  4KAW X;  3N3Y A;  4KMD A;  4C3J C;  3TTG A;  4KMA A;  1Y1V K;  3L4J A;  2GSN A;  3GTP C;  2O5J A;  4OIQ A;  2R93 K;  3GTM C;  4KN4 A;  4BXX K;  1AB4 A;  3LPX A;  3CQZ A;  4YFK A;  3RZO K;  1TWC A;  4LLG A;  3DLL S;  3M3Y C;  1O26 A;  4Q5S A;  4A3C K;  2RH6 A;  4YFX A;  2XCQ A;  3GTO A;  3EQL A;  3G4A A;  3I4M C;  1XZP B;  1K83 C;  4XCH A;  1WQG A;  4BY1 C;  4LOW A;  3GSI A;  1EH1 A;  1EK8 A;  4A3E K;  5IYC K;  4OIP A;  1WQH A;  4G0W A;  5IYD C;  4QIW L;  3FOF A;  1ZBS A;  2NVT K;  2WAQ D;  4KB4 A;  5HL7 S;  2JA6 C;  1PJ5 A;  3G4C A;  4PAB A;  5L46 A;  3SZZ A;  3N0C A;  2WB1 D;  4C3J K;  3H0G A;  1V5V A;  3LAP A;  3IPJ A;  5IOQ A;  3S17 C;  4KAS A;  4KC6 A;  1RU0 A;  3N0B A;  4A3L C;  4A3F K;  2P5M A;  3RZO C;  1FEU A;  4KDD A;  1YCL A;  1VLO A;  4WFN S;  3A8K A;  2JA5 K;  3WOD A;  2YU9 A;  5M5X K;  4A3C C;  2A68 A;  1DCP A;  4A3G C;  2VUM K;  2PHC B;  1J6X A;  1PJ7 A;  1BJT A;  1USO A;  3VA7 A;  1K83 K;  2B63 C;  1IS1 A;  1SFO C;  3PO2 C;  1I6H K;  3HOW C;  4A3E C;  4Q4Z A;  5IYC C;  4KB2 A;  1O29 A;  3S14 C;  3CAG A;  3S1R C;  2NVT C;  2W7V A;  1HQM A;  4G7Z A;  2GAG C;  5IP9 C;  2KXY A;  4BY7 C;  4A3M C;  2E2I C;  5DM7 S;  4KMH A;  1I3Q C;  3HXA A;  4WCE S;  4A3J C;  5IOT A;  2R92 K;  1INN A;  2XCO A;  4BKW A;  4BLA A;  2ZUE A;  4WF9 S;  4X6A C;  3S2H K;  1XZP A;  1O28 A;  3H3V L;  4QJV B;  4MEY A;  3TFJ A;  3S2D C;  5M3M K;  3GTM A;  3FKI A;  4C45 A;  4KAR A;  5C4X K;  1EQR A;  2JA8 K;  2VUM C;  3FOE A;  1VGX A;  2L3U A;  5C4J C;  1TWH A;  2V6S A;  5IYB C;  4LR2 A;  2B63 K;  1I6V A;  4AH6 A;  3HKZ D;  4LK0 A;  1GE9 A;  3JST A;  3AD8 C;  3BP3 A;  1YNN A;  3S1R K;  3Q3Q A;  4C2M K;  1TWC K;  1KQ4 A;  4GFQ A;  4A3B K;  3GIR A;  2ZUF A;  2NVX K;  2YU9 K;  4BLB A;  5FLM C;  4A3J K;  3S1Q C;  1ISE A;  4C3I K;  2R92 C;  2CFA B;  4Y52 K;  5EGE A;  2E2H A;  3CF5 S;  3S2H C;  1B4A A;  4C3H K;  5TMF A;  1BGW A;  4YFN A;  1TWF K;  1F7V A;  3S1N C;  1JVI A;  5M5W K;  2PPB A;  1XXB A;  1WOP A;  5HQH A;  2KPU A;  2PA8 L;  5JVG S;  4WFB S;  3GTJ K;  3GTQ K;  3A8I A;  3OPF A;  1Y1W C;  3AH5 A;  4MEX A;  4WIL A;  5CJ9 A;  1VH2 A;  1IBA A;  4C2M C;  3NUH A;  1JOE A;  1TWC C;  3GTL C;  1J6W A;  3I4N C;  4GTC A;  4A3B C;  1O24 A;  4FZB A;  1XXA A;  4QIW D;  3I4M K;  3AQP A;  1TWF A;  5IOR A;  4C3I C;  3HOV C;  3LYW A;  2FQT A;  2WB1 L;  1DD5 A;  4Y52 C;  3BUE A;  1K83 A;  3GTP A;  3HOX C;  1ZYR A;  2EBB A;  3S1N K;  2PA8 D;  1WIH A;  3CQZ K;  3T01 A;  3LAJ A;  2NVY A;  2GAH C;  3S17 K;  1Y1W A;  5DM6 S;  2Y0S L;  4P9S A;  3A8J A;  2ZJQ S;  1X31 C;  3GTG K;  1DCH A;  5FJ8 K;  3S16 K;  4A3L K;  1TWA A;  2NVY K;  4BBR K;  3T02 A;  1TWG K;  3GTL A;  1O25 A;  2NVX A;  2JA7 C;  5JFE A;  3QX3 A;  1YNJ A;  4XSZ A;  3S15 K;  5M3F K;  4KM9 A;  3GTL K;  3S1M C;  1O27 A;  1C0A A;  3AD7 C;  2R7Z C;  4A3K K;  4MQ9 A;  1WCM C;  4J3N A;  2O5I A;  4KAT A;  2L5N A;  4LJZ A;  1BDF A;  3PIP S;  4BBS C;  3HOV K;  1J98 A;  2E2I A;  3HOW K;  3HOU C;  2CW0 A;  4U67 S;  1TWH K;  4A93 K;  3M4O C;  1EFW A;  2R93 A;  1I50 K; 
#chains in the Genus database with same CATH homology
 4YFX A;  4A3G K;  2E2H C;  4A3B K;  3CQZ C;  3HKZ L;  4BY7 K;  3EQL A;  4A3D K;  4XSX A;  3I4M C;  4Y7N K;  4OIR A;  3HOY C;  1K83 C;  3RZD C;  2NVQ C;  2NVX K;  5C44 C;  2YU9 K;  5FLM C;  4A3J K;  4BY1 C;  3S1Q C;  4C3I K;  2R92 C;  1I6H C;  1SFO K;  4KMU A;  3PO2 K;  4A3E K;  1IW7 A;  3DXJ A;  2A69 A;  4OIP A;  3GTG C;  5IYC K;  4Y52 K;  3S16 C;  4BBR C;  2NVY C;  5IP7 C;  3FKI C;  1TWG C;  5IYD C;  3S2H C;  4QIW L;  3S14 K;  2JA7 K;  2NVT K;  4C3H K;  5TMF A;  4YFN A;  1TWF K;  5C3E C;  3PO3 C;  3S15 C;  2WAQ D;  3S1N C;  2JA6 C;  4OIO A;  5IP9 K;  5M5W K;  2PMZ L;  4A3M K;  2PPB A;  2E2I K;  2WB1 D;  4C3J K;  3S1M K;  1I3Q K;  4A3I K;  3HOZ C;  2R7Z K;  4QJV A;  2A6H A;  4A3K C;  2E2J K;  4JK1 A;  4G7O A;  1WCM K;  3K7A K;  3S17 C;  2PA8 L;  4BBS K;  3GTJ K;  1TWC K;  3H0G K;  4A3L C;  4KN7 A;  3GTQ K;  4A3F K;  2PMZ D;  4XLN A;  3RZO C;  3GTO K;  4X6A K;  1TWH C;  5D4D A;  3HOU K;  4A93 C;  2JA5 K;  3WOD A;  5TMC A;  1R9T C;  1Y1W C;  3M4O K;  4YG2 A;  4MEX A;  5M5X K;  4XLP A;  3S2D K;  1XPP A;  4A3C C;  5M5Y K;  4C2M C;  2Y0S D;  4AYB L;  2A68 A;  5C4X C;  1I50 C;  1TWC C;  3GTL C;  2JA8 C;  3I4N C;  4A3G C;  1TWA K;  4A3B C;  5C4J K;  2E2H K;  2VUM K;  4QIW D;  2BE5 A;  4A3D C;  1Y1V C;  2NVX C;  4Y7N C;  3H3V D;  3HOY K;  1K83 K;  5IYB K;  3RZD K;  2NVQ K;  3GTP K;  3I4M K;  2R93 C;  4C3I C;  2B63 C;  3HOV C;  3GTM K;  4BXX C;  1SFO C;  3PO2 C;  3GTK K;  1I6H K;  3HOW C;  4A3E C;  2WB1 L;  4Q4Z A;  4Y52 C;  2A6E A;  5IYC C;  3HOX C;  3S14 C;  5IP7 K;  1ZYR A;  3M3Y K;  3S1R C;  1SMY A;  2NVT C;  4C3H C;  4NOI A;  1HQM A;  1TWF C;  5C3E K;  3S1N K;  3PO3 K;  4LK1 A;  4G7Z A;  5IP9 C;  2PA8 D;  4BY7 C;  3CQZ K;  4A3M C;  2E2I C;  1I3Q C;  2YU9 C;  3HOZ K;  5C44 K;  5FLM K;  4A3J C;  2WAQ L;  4BY1 K;  3S1Q K;  3K7A C;  2R92 K;  3S17 K;  2Y0S L;  3GTJ C;  3H0G C;  3GTG K;  5FJ8 K;  3GTQ C;  3S16 K;  4A3L K;  4BBR K;  2NVY K;  4X6A C;  3FKI K;  1TWG K;  3S2H K;  5IYD K;  3H3V L;  2JA7 C;  1R9T K;  1Y1W K;  1YNJ A;  4QJV B;  4MEY A;  4XSZ A;  4G7H A;  3S15 K;  3S2D C;  2JA6 K;  5M3M K;  5M3F K;  4OIN A;  5C4X K;  3GTL K;  4C3J C;  3S1M C;  2JA8 K;  3I4N K;  1TWA C;  2VUM C;  4A3I C;  5C4J C;  2R7Z C;  4A3K K;  4MQ9 A;  2E2J C;  1Y1V K;  1WCM C;  5IYB C;  2O5I A;  3GTP C;  2O5J A;  4OIQ A;  4LJZ A;  1BDF A;  4BBS C;  2R93 K;  2B63 K;  3HOV K;  1I6V A;  4ZH4 A;  4KN4 A;  3GTM C;  4BXX K;  3GTK C;  4AYB D;  4A3F C;  3HOW K;  3RZO K;  3HKZ D;  4YFK A;  3GTO C;  4LK0 A;  3HOU C;  2CW0 A;  1TWH K;  2JA5 C;  4LLG A;  4A93 K;  3M4O C;  3HOX K;  3M3Y C;  1YNN A;  3S1R K;  4GZY A;  4Q5S A;  4A3C K;  4C2M K;  1I50 K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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