4A3JC

Rna polymerase ii initial transcribing complex with a 2nt dna-rna hybrid and soaked with gmpcpp
Total Genus 62
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
62
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1
publication title Structural Basis of Initial RNA Polymerase II Transcription.
pubmed doi rcsb
molecule tags Transcription
total genus 62
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-09-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 4a3jC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 4a3jC01
4C3IC 4QJVB 4A3BK 3HOZC 4G7ZA 2E2IC 2WAQL 4LLGA 4OIPA 3GTOC 4A3CK 2PPBA 3GTLC 3GTKK 1BDFA 4BY1K 3PO2C 3HOUK 1HQMA 4C3IK 4MEYA 4C3HC 1I3QC 5IYBC 2R7ZC 3HOVC 3HOZK 3GTOK 2CW0A 3S15K 3DXJA 4KN4A 2JA5C 3PO2K 4JK1A 4LJZA 3H0GC 4YG2A 4C3HK 4A3LC 1I3QK 5IYBK 2R7ZK 4LK0A 3PO3C 3S1NC 3S2HC 5M3FK 2JA5K 2O5IA 4Y52C 4A3JK 3H0GK 4AYBD 4QIWL 4QIWD 4AYBL 4A3LK 3RZDC 3M4OC 3GTMC 3PO3K 2YU9C 1Y1WC 3S1NK 3S2HK 1YNJA 3S1MC 4Y52K 5M5XK 3HOXC 3HKZL 3HKZD 3S16C 1TWGC 3RZDK 3M3YC 2YU9K 1XPPA 5TMFA 2E2HC 3GTGC 3I4NK 5C3EC 1ZYRA 4XSZA 4C3JC 3GTQC 1I6VA 1SMYA 4OIQA 4C2MC 5C4XC 3HOXK 2E2IK 3S16K 2NVTC 4G7HA 3S2DC 5IP9C 1TWGK 3M3YK 4ZH4A 1TWHC 1IW7A 3GTLK 3CQZC 4NOIA 2R92C 4Q5SA 1TWCC 1Y1VC 4C3JK 5C4XK 3GTQK 4C2MK 3HOVK 4Q4ZA 2NVTK 3S2DK 5IP9K 5D4DA 1SFOC 2A6EA 3CQZK 5C4JC 4LK1A 4A93C 2R92K 1TWCK 4XLNA 2PMZL 2PMZD 1TWFC 1TWAC 4YFNA 2NVYC 4A3IC 3RZOC 4A3KC 1YNNA 5C4JK 5M5YK 4A93K 4MEXA 4MQ9A 3S1RC 4KN7A 4XLPA 2A6HA 5IYCC 1K83C 1TWFK 1TWAK 4A3IK 2NVYK 2PA8L 2PA8D 4A3KK 1Y1WK 3GTMK 2E2JC 4A3EC 4Y7NC 2JA7C 4BY7C 3S1MK 2NVXC 2JA8C 3RZOK 2NVQC 4A3GC 3S1RK 5IYCK 3H3VD 5FLMC 1I50C 4A3MC 1K83K 2WB1L 2WB1D 4X6AC 2E2JK 2E2HK 1I6HC 4Y7NK 5C44C 2JA7K 5C3EK 5TMCA 2NVXK 3GTGK 5IYDC 2R93C 4BY7K 2NVQK 4A3GK 4OIOA 4A3BC 1I50K 5FLMK 4A3MK 4GZYA 2A68A 4A3CC 1TWHK 4X6AK 3WODA 5C44K 2Y0SL 2Y0SD 3GTKC 2B63C 2R93K 4BY1C 1Y1VK 5IYDK 4YFXA 3GTJC 3S14C 3I4MC 1WCMC 2WAQD 5M5WK 1SFOK 4KMUA 3S15C 4QJVA 5FJ8K 2BE5A 3HOYC 2B63K 3GTJK 3S14K 3I4MK 1WCMK 3M4OK 4XSXA 2A69A 4BBSC 2JA6C 3S17C 2VUMC 4A3DC 3FKIC 2O5JA 3S1QC 3HOYK 4A3JC 5M3MK 4OINA 4A3FC 3H3VL 4YFKA 5IP7C 3EQLA 4BBSK 4BXXC 2JA6K 3S17K 2VUMK 4A3DK 3FKIK 4A3EK 3S1QK 3K7AC 4BBRC 3GTPC 2JA8K 3HOWC 1R9TC 4OIRA 4A3FK 5IP7K 4BXXK 3I4NC 1I6HK 3K7AK 4BBRK 3GTPK 4G7OA 3HOWK 3HOUC 1R9TK
chains in the Genus database with same CATH superfamily
1J6VA 2WAQL 1TWAA 3GTMA 4LLGA 4A3CK 2PPBA 1GE9A 2ZFZA 4P5BA 2Y3PA 4C3HC 3S15K 2KWAA 2ZUEA 3GTQA 3TTGA 3BP8C 4YG2A 4C3HK 4WFAS 1WSRA 4LK0A 4BLAA 3VA7A 3S2HC 5M3FK 2O5IA 1Y1VA 4AYBD 2V6UA 1SFOA 4G0VA 3RZDC 1Y1WC 3S2HK 3S1MC 1XZQB 3GTJA 3HKZD 4KM8A 1WOSA 3RZDK 1ZQ1C 5JVOA 2E2HC 1JQWA 5C3EC 4GT9A 3OEPA 1I6VA 4IO9S 4OIQA 4C2MC 3HXAA 4G7HA 2VUMA 1TWHC 4PAAA 1WORA 4FZBA 4Q5SA 3GEIA 4KAWX 1F7UA 4C2MK 3Q3QA 4KARA 1EFWA 4XLNA 2PMZL 3AD8C 1ISEA 4WILA 3LAJA 1ZXOA 2D6FC 4XLPA 3OPFA 3M4OK 1IBAA 4Y7NC 4BY7C 1WOOA 4A3MC 4KMDA 3FKIA 1XXCA 2WB1D 3GTGK 1I6HC 4Y7NK 4BY7K 5JVHS 3GSIA 4OIOA 2ZJRS 4A3BC 4A3MK 4GZYA 3GDZA 2KPUA 3WODA 2Y0SL 3A8JA 3V4GA 2B63C 1BGWA 2CFAB 4WJ3M 3TFJA 2WAQD 4WF9S 4KMUA 5JFEA 4KMHA 4G0UA 2B63K 1EK8A 3S17C 4ILDA 3S1QC 3AH5A 4A3JC 3S17K 4BKWA 3ERED 3S1QK 3K7AC 2V6SA 3GTPC 3H0GA 3FOEA 3K7AK 3GTPK 3HOUC 2GAHC 1O24A 4QJVB 3HOZC 4P5AA 4OIPA 3GTOC 1O2BA 4BY1K 3PO2C 3HOUK 1HQMA 1O25A 4MEYA 3HOZK 4WFBS 2R7ZC 3GTOK 2CW0A 3GTGA 4GTEA 2JA5C 1XZPA 3PO2K 4JK1A 4LJZA 4A3LC 1VH2A 2R7ZK 2L5NA 1J6XA 1WSVA 3S1NC 2JA5K 1PJ6A 4Y52C 2FQTA 4QIWL 4A3LK 3FOFA 2YU9C 2ZJQS 3S1NK 1PJ5A 1YNJA 4Y52K 3HOXC 3S16C 1TWGC 1F93A 2YU9K 3I4NK 3BUEA 4XSZA 3HOXK 1SMYA 1G51A 3S16K 3S2DC 1TWGK 5IP9C 4ZH4A 1IW7A 4XCHA 1TWCC 3S2DK 5IP9K 1TWCK 1X31C 3AD7C 1O28A 4A3IC 3RZOC 1BJTA 4A3KC 1YNNA 4GTAA 2ZUFA 4KN7A 5HL8A 4A3IK 1VJEA 3RZOK 2PA8L 4A3KK 1Y1WK 2E2JC 3S1MK 1USMA 1XXBA 3GIRA 4FM9A 4WJ4A 2R7ZA 5FLMC 1I50C 1VGXA 4X6AC 2E2JK 2E2HK 2JA5A 4LR2A 5C3EK 5TMCA 2R93C 3G4AA 1DCHA 4RMFA 1DCPA 5FLMK 1I50K 1TWHK 1INNA 4X6AK 5IOQA 3GTKC 2R93K 1F7VA 3I4MC 1IE0A 1B4AA 5M5WK 1O2AA 2YU9A 2FQOA 3HOYC 3TFIA 3I4MK 4BBSC 3GEHA 3N0CA 4GTFA 2O5JA 3HOYK 1WOPA 4OINA 3H3VL 4BBSK 4BXXC 5IORA 3N3YA 1L0WA 1TWCA 1R9TC 1PJ7A 4BXXK 1WIHA 1I6HK 3T02A 1R9TK 5HQHA 2KXYA 4C3IC 4A3BK 4G7ZA 2E2IC 1XZQA 1Y1WA 1J98A 4IOCS 3GTLC 4C3IK 5IYBC 3HOVC 3JSTA 2E2HA 4GTBA 3T00A 2GSNA 1YCLA 5IYBK 3A8IA 1TWHA 1C0AA 4U67S 2R93A 4A3JK 3IPJA 4AH6A 4AYBL 2PHCB 3GTMC 1JVIA 4KASA 2EBBA 5M5XK 3HKZL 3MMLB 5TJ3A 1VRQC 1XPPA 5TMFA 3AQOA 4KB2A 1ZYRA 3GTQC 1IS1A 2NVTC 1EQRA 3CQZC 4NOIA 5DM7S 2R92C 3GTQK 1Y1VC 4Q4ZA 3SZYA 2NVTK 1J6WA 5D4DA 1SFOC 3CQZK 4DDQA 5C4JC 1B4BA 4A93C 2R92K 2PMZD 4C45A 1TWFC 2NVYC 5C4JK 2B63A 5M5YK 2CFAA 4A93K 3AQPA 4MEXA 4MQ9A 3S1RC 4WCES 2A6HA 5HL7S 1BS2A 1K83C 1TWFK 1V5VA 1XXAA 2NVYK 2JA7C 4A3EC 4GTDA 3LYWA 2NVXC 2JA8C 3S1RK 3AD9C 2GSOA 4M1XA 3H3VD 1K83K 2WB1L 4LOWA 5IOTA 2JA7K 5C44C 3PIOS 1KQ4A 2NVXK 3NUHA 4GTCA 5E68A 4WFNS 5IOSA 4PABA 2A68A 4A3CC 1ZVUA 5C44K 3GTPA 2Y0SD 4LQYA 5DM6S 4P9SA 3S14C 1WCMC 2L3UA 1WQFA 3S15C 3CAGA 4QJVA 5FJ8K 3S14K 1WCMK 3GTOA 2JA6C 3BP3A 3FKIC 2V6TA 2P8TA 3LAPA 1DD5A 3LPXA 1O27A 4YFKA 5IP7C 3L4KA 2JA6K 3CQZA 3FKIK 1IL2A 4BBRC 2R92A 3HOWC 4OIRA 1FEUA 5IP7K 4J3NA 3CF5S 4BBRK 1EH1A 3HOWK 1RU0A 3A8KA 1TWFA 2ZJPS 2NVYA 4KMAA 4KATA 3L4JA 3GTKK 1BDFA 1UV7A 1TWGA 1I3QC 1K83A 4BLBA 2JA7A 3DXJA 2RGRA 2NVXA 4KN4A 3H0GC 1I3QK 3PO3C 4KM9A 1F9NA 3H0GK 4QIWD 1DCOA 3M4OC 3PO3K 1IQ0A 2XCQA 1WCMA 3M3YC 3QX3A 3GTGC 5EGEA 4C3JC 5C4XC 1AB4A 1VLOA 1XZPB 2E2IK 4O2DA 2JA6A 3M3YK 3GTLK 3FHZA 5L46A 4C3JK 5C4XK 1I50A 4G0WA 3HOVK 1ZBSA 2A6EA 3DLLS 4LK1A 3SZZA 2GAGC 4GFQA 4GTLA 5CHPA 1WQGA 1TWAC 4YFNA 3GTKA 1O2FB 4KB4A 3PIPS 5IYCC 3ADAC 1TWAK 3GTMK 2PA8D 3S0XA 2NVQC 4A3GC 1I3QA 5EGHA 2RH6A 5IYCK 1HI9A 5JVGS 5IYDC 2JH3A 2NVQK 4A3GK 3OREA 3N0BA 1R9TA 5IYDK 1YX2A 4BY1C 1Y1VK 4YFXA 3GTJC 4IOAS 3GEEA 4KC6A 1SFOK 2P5MA 2XCOA 2BE5A 4KDDA 3GTJK 1O29A 3T01A 2E2IA 4XSXA 2A69A 1JOEA 2VUMC 3GTLA 4A3DC 2W7VA 5CJ9A 1EI6A 5M3MK 3TFHA 4A3FC 1WQHA 3EQLA 2VUMK 4A3DK 4A3EK 3G4CA 2JA8K 2GSUA 1USOA 4A3FK 2KQ1A 1O26A 4G7OA 3I4NC 2XCRB
chains in the Genus database with same CATH topology
4C3IC 4QJVB 4A3BK 3HOZC 4G7ZA 2E2IC 2WAQL 4LLGA 4OIPA 3GTOC 4A3CK 2PPBA 3GTLC 3GTKK 1BDFA 4BY1K 3PO2C 3HOUK 1HQMA 4C3IK 4MEYA 4C3HC 1I3QC 5IYBC 2R7ZC 3HOVC 3HOZK 3GTOK 2CW0A 3S15K 3DXJA 4KN4A 2JA5C 3PO2K 4JK1A 4LJZA 3H0GC 4YG2A 4C3HK 4A3LC 1I3QK 5IYBK 2R7ZK 4LK0A 3PO3C 3S1NC 3S2HC 5M3FK 2JA5K 2O5IA 4Y52C 4A3JK 3H0GK 4AYBD 4QIWL 4QIWD 4AYBL 4A3LK 3RZDC 3M4OC 3GTMC 3PO3K 2YU9C 1Y1WC 3S1NK 3S2HK 1YNJA 3S1MC 4Y52K 5M5XK 3HOXC 3HKZL 3HKZD 3S16C 1TWGC 3RZDK 3M3YC 2YU9K 1XPPA 5TMFA 2E2HC 3GTGC 3I4NK 5C3EC 1ZYRA 4XSZA 4C3JC 3GTQC 1I6VA 1SMYA 4OIQA 4C2MC 5C4XC 3HOXK 2E2IK 3S16K 2NVTC 4G7HA 3S2DC 5IP9C 1TWGK 3M3YK 4ZH4A 1TWHC 1IW7A 3GTLK 3CQZC 4NOIA 2R92C 4Q5SA 1TWCC 1Y1VC 4C3JK 5C4XK 3GTQK 4C2MK 3HOVK 4Q4ZA 2NVTK 3S2DK 5IP9K 5D4DA 1SFOC 2A6EA 3CQZK 5C4JC 4LK1A 4A93C 2R92K 1TWCK 4XLNA 2PMZL 2PMZD 1TWFC 1TWAC 4YFNA 2NVYC 4A3IC 3RZOC 4A3KC 1YNNA 5C4JK 5M5YK 4A93K 4MEXA 4MQ9A 3S1RC 4KN7A 4XLPA 2A6HA 5IYCC 1K83C 1TWFK 1TWAK 4A3IK 2NVYK 2PA8L 2PA8D 4A3KK 1Y1WK 3GTMK 2E2JC 4A3EC 4Y7NC 2JA7C 4BY7C 3S1MK 2NVXC 2JA8C 3RZOK 2NVQC 4A3GC 3S1RK 5IYCK 3H3VD 5FLMC 1I50C 4A3MC 1K83K 2WB1L 2WB1D 4X6AC 2E2JK 2E2HK 1I6HC 4Y7NK 5C44C 2JA7K 5C3EK 5TMCA 2NVXK 3GTGK 5IYDC 2R93C 4BY7K 2NVQK 4A3GK 4OIOA 4A3BC 1I50K 5FLMK 4A3MK 4GZYA 2A68A 4A3CC 1TWHK 4X6AK 3WODA 5C44K 2Y0SL 2Y0SD 3GTKC 2B63C 2R93K 4BY1C 1Y1VK 5IYDK 4YFXA 3GTJC 3S14C 3I4MC 1WCMC 2WAQD 5M5WK 1SFOK 4KMUA 3S15C 4QJVA 5FJ8K 2BE5A 3HOYC 2B63K 3GTJK 3S14K 3I4MK 1WCMK 3M4OK 4XSXA 2A69A 4BBSC 2JA6C 3S17C 2VUMC 4A3DC 3FKIC 2O5JA 3S1QC 3HOYK 4A3JC 5M3MK 4OINA 4A3FC 3H3VL 4YFKA 5IP7C 3EQLA 4BBSK 4BXXC 2JA6K 3S17K 2VUMK 4A3DK 3FKIK 4A3EK 3S1QK 3K7AC 4BBRC 3GTPC 2JA8K 3HOWC 1R9TC 4OIRA 4A3FK 5IP7K 4BXXK 3I4NC 1I6HK 3K7AK 4BBRK 3GTPK 4G7OA 3HOWK 3HOUC 1R9TK
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4C3I C;  4QJV B;  4A3B K;  3HOZ C;  4G7Z A;  2E2I C;  2WAQ L;  4LLG A;  4OIP A;  3GTO C;  4A3C K;  2PPB A;  3GTL C;  3GTK K;  1BDF A;  4BY1 K;  3PO2 C;  3HOU K;  1HQM A;  4C3I K;  4MEY A;  4C3H C;  1I3Q C;  5IYB C;  2R7Z C;  3HOV C;  3HOZ K;  3GTO K;  2CW0 A;  3S15 K;  3DXJ A;  4KN4 A;  2JA5 C;  3PO2 K;  4JK1 A;  4LJZ A;  3H0G C;  4YG2 A;  4C3H K;  4A3L C;  1I3Q K;  5IYB K;  2R7Z K;  4LK0 A;  3PO3 C;  3S1N C;  3S2H C;  5M3F K;  2JA5 K;  2O5I A;  4Y52 C;  4A3J K;  3H0G K;  4AYB D;  4QIW L;  4QIW D;  4AYB L;  4A3L K;  3RZD C;  3M4O C;  3GTM C;  3PO3 K;  2YU9 C;  1Y1W C;  3S1N K;  3S2H K;  1YNJ A;  3S1M C;  4Y52 K;  5M5X K;  3HOX C;  3HKZ L;  3HKZ D;  3S16 C;  1TWG C;  3RZD K;  3M3Y C;  2YU9 K;  1XPP A;  5TMF A;  2E2H C;  3GTG C;  3I4N K;  5C3E C;  1ZYR A;  4XSZ A;  4C3J C;  3GTQ C;  1I6V A;  1SMY A;  4OIQ A;  4C2M C;  5C4X C;  3HOX K;  2E2I K;  3S16 K;  2NVT C;  4G7H A;  3S2D C;  5IP9 C;  1TWG K;  3M3Y K;  4ZH4 A;  1TWH C;  1IW7 A;  3GTL K;  3CQZ C;  4NOI A;  2R92 C;  4Q5S A;  1TWC C;  1Y1V C;  4C3J K;  5C4X K;  3GTQ K;  4C2M K;  3HOV K;  4Q4Z A;  2NVT K;  3S2D K;  5IP9 K;  5D4D A;  1SFO C;  2A6E A;  3CQZ K;  5C4J C;  4LK1 A;  4A93 C;  2R92 K;  1TWC K;  4XLN A;  2PMZ L;  2PMZ D;  1TWF C;  1TWA C;  4YFN A;  2NVY C;  4A3I C;  3RZO C;  4A3K C;  1YNN A;  5C4J K;  5M5Y K;  4A93 K;  4MEX A;  4MQ9 A;  3S1R C;  4KN7 A;  4XLP A;  2A6H A;  5IYC C;  1K83 C;  1TWF K;  1TWA K;  4A3I K;  2NVY K;  2PA8 L;  2PA8 D;  4A3K K;  1Y1W K;  3GTM K;  2E2J C;  4A3E C;  4Y7N C;  2JA7 C;  4BY7 C;  3S1M K;  2NVX C;  2JA8 C;  3RZO K;  2NVQ C;  4A3G C;  3S1R K;  5IYC K;  3H3V D;  5FLM C;  1I50 C;  4A3M C;  1K83 K;  2WB1 L;  2WB1 D;  4X6A C;  2E2J K;  2E2H K;  1I6H C;  4Y7N K;  5C44 C;  2JA7 K;  5C3E K;  5TMC A;  2NVX K;  3GTG K;  5IYD C;  2R93 C;  4BY7 K;  2NVQ K;  4A3G K;  4OIO A;  4A3B C;  1I50 K;  5FLM K;  4A3M K;  4GZY A;  2A68 A;  4A3C C;  1TWH K;  4X6A K;  3WOD A;  5C44 K;  2Y0S L;  2Y0S D;  3GTK C;  2B63 C;  2R93 K;  4BY1 C;  1Y1V K;  5IYD K;  4YFX A;  3GTJ C;  3S14 C;  3I4M C;  1WCM C;  2WAQ D;  5M5W K;  1SFO K;  4KMU A;  3S15 C;  4QJV A;  5FJ8 K;  2BE5 A;  3HOY C;  2B63 K;  3GTJ K;  3S14 K;  3I4M K;  1WCM K;  3M4O K;  4XSX A;  2A69 A;  4BBS C;  2JA6 C;  3S17 C;  2VUM C;  4A3D C;  3FKI C;  2O5J A;  3S1Q C;  3HOY K;  4A3J C;  5M3M K;  4OIN A;  4A3F C;  3H3V L;  4YFK A;  5IP7 C;  3EQL A;  4BBS K;  4BXX C;  2JA6 K;  3S17 K;  2VUM K;  4A3D K;  3FKI K;  4A3E K;  3S1Q K;  3K7A C;  4BBR C;  3GTP C;  2JA8 K;  3HOW C;  1R9T C;  4OIR A;  4A3F K;  5IP7 K;  4BXX K;  3I4N C;  1I6H K;  3K7A K;  4BBR K;  3GTP K;  4G7O A;  3HOW K;  3HOU C;  1R9T K; 
#chains in the Genus database with same CATH topology
 1J6V A;  2WAQ L;  1TWA A;  3GTM A;  4LLG A;  4A3C K;  2PPB A;  1GE9 A;  2ZFZ A;  4P5B A;  2Y3P A;  4C3H C;  3S15 K;  2KWA A;  2ZUE A;  3GTQ A;  3TTG A;  3BP8 C;  4YG2 A;  4C3H K;  4WFA S;  1WSR A;  4LK0 A;  4BLA A;  3VA7 A;  3S2H C;  5M3F K;  2O5I A;  1Y1V A;  4AYB D;  2V6U A;  1SFO A;  4G0V A;  3RZD C;  1Y1W C;  3S2H K;  3S1M C;  1XZQ B;  3GTJ A;  3HKZ D;  4KM8 A;  1WOS A;  3RZD K;  1ZQ1 C;  5JVO A;  2E2H C;  1JQW A;  5C3E C;  4GT9 A;  3OEP A;  1I6V A;  4IO9 S;  4OIQ A;  4C2M C;  3HXA A;  4G7H A;  2VUM A;  1TWH C;  4PAA A;  1WOR A;  4FZB A;  4Q5S A;  3GEI A;  4KAW X;  1F7U A;  4C2M K;  3Q3Q A;  4KAR A;  1EFW A;  4XLN A;  2PMZ L;  3AD8 C;  1ISE A;  4WIL A;  3LAJ A;  1ZXO A;  2D6F C;  4XLP A;  3OPF A;  3M4O K;  1IBA A;  4Y7N C;  4BY7 C;  1WOO A;  4A3M C;  4KMD A;  3FKI A;  1XXC A;  2WB1 D;  3GTG K;  1I6H C;  4Y7N K;  4BY7 K;  5JVH S;  3GSI A;  4OIO A;  2ZJR S;  4A3B C;  4A3M K;  4GZY A;  3GDZ A;  2KPU A;  3WOD A;  2Y0S L;  3A8J A;  3V4G A;  2B63 C;  1BGW A;  2CFA B;  4WJ3 M;  3TFJ A;  2WAQ D;  4WF9 S;  4KMU A;  5JFE A;  4KMH A;  4G0U A;  2B63 K;  1EK8 A;  3S17 C;  4ILD A;  3S1Q C;  3AH5 A;  4A3J C;  3S17 K;  4BKW A;  3ERE D;  3S1Q K;  3K7A C;  2V6S A;  3GTP C;  3H0G A;  3FOE A;  3K7A K;  3GTP K;  3HOU C;  2GAH C;  1O24 A;  4QJV B;  3HOZ C;  4P5A A;  4OIP A;  3GTO C;  1O2B A;  4BY1 K;  3PO2 C;  3HOU K;  1HQM A;  1O25 A;  4MEY A;  3HOZ K;  4WFB S;  2R7Z C;  3GTO K;  2CW0 A;  3GTG A;  4GTE A;  2JA5 C;  1XZP A;  3PO2 K;  4JK1 A;  4LJZ A;  4A3L C;  1VH2 A;  2R7Z K;  2L5N A;  1J6X A;  1WSV A;  3S1N C;  2JA5 K;  1PJ6 A;  4Y52 C;  2FQT A;  4QIW L;  4A3L K;  3FOF A;  2YU9 C;  2ZJQ S;  3S1N K;  1PJ5 A;  1YNJ A;  4Y52 K;  3HOX C;  3S16 C;  1TWG C;  1F93 A;  2YU9 K;  3I4N K;  3BUE A;  4XSZ A;  3HOX K;  1SMY A;  1G51 A;  3S16 K;  3S2D C;  1TWG K;  5IP9 C;  4ZH4 A;  1IW7 A;  4XCH A;  1TWC C;  3S2D K;  5IP9 K;  1TWC K;  1X31 C;  3AD7 C;  1O28 A;  4A3I C;  3RZO C;  1BJT A;  4A3K C;  1YNN A;  4GTA A;  2ZUF A;  4KN7 A;  5HL8 A;  4A3I K;  1VJE A;  3RZO K;  2PA8 L;  4A3K K;  1Y1W K;  2E2J C;  3S1M K;  1USM A;  1XXB A;  3GIR A;  4FM9 A;  4WJ4 A;  2R7Z A;  5FLM C;  1I50 C;  1VGX A;  4X6A C;  2E2J K;  2E2H K;  2JA5 A;  4LR2 A;  5C3E K;  5TMC A;  2R93 C;  3G4A A;  1DCH A;  4RMF A;  1DCP A;  5FLM K;  1I50 K;  1TWH K;  1INN A;  4X6A K;  5IOQ A;  3GTK C;  2R93 K;  1F7V A;  3I4M C;  1IE0 A;  1B4A A;  5M5W K;  1O2A A;  2YU9 A;  2FQO A;  3HOY C;  3TFI A;  3I4M K;  4BBS C;  3GEH A;  3N0C A;  4GTF A;  2O5J A;  3HOY K;  1WOP A;  4OIN A;  3H3V L;  4BBS K;  4BXX C;  5IOR A;  3N3Y A;  1L0W A;  1TWC A;  1R9T C;  1PJ7 A;  4BXX K;  1WIH A;  1I6H K;  3T02 A;  1R9T K;  5HQH A;  2KXY A;  4C3I C;  4A3B K;  4G7Z A;  2E2I C;  1XZQ A;  1Y1W A;  1J98 A;  4IOC S;  3GTL C;  4C3I K;  5IYB C;  3HOV C;  3JST A;  2E2H A;  4GTB A;  3T00 A;  2GSN A;  1YCL A;  5IYB K;  3A8I A;  1TWH A;  1C0A A;  4U67 S;  2R93 A;  4A3J K;  3IPJ A;  4AH6 A;  4AYB L;  2PHC B;  3GTM C;  1JVI A;  4KAS A;  2EBB A;  5M5X K;  3HKZ L;  3MML B;  5TJ3 A;  1VRQ C;  1XPP A;  5TMF A;  3AQO A;  4KB2 A;  1ZYR A;  3GTQ C;  1IS1 A;  2NVT C;  1EQR A;  3CQZ C;  4NOI A;  5DM7 S;  2R92 C;  3GTQ K;  1Y1V C;  4Q4Z A;  3SZY A;  2NVT K;  1J6W A;  5D4D A;  1SFO C;  3CQZ K;  4DDQ A;  5C4J C;  1B4B A;  4A93 C;  2R92 K;  2PMZ D;  4C45 A;  1TWF C;  2NVY C;  5C4J K;  2B63 A;  5M5Y K;  2CFA A;  4A93 K;  3AQP A;  4MEX A;  4MQ9 A;  3S1R C;  4WCE S;  2A6H A;  5HL7 S;  1BS2 A;  1K83 C;  1TWF K;  1V5V A;  1XXA A;  2NVY K;  2JA7 C;  4A3E C;  4GTD A;  3LYW A;  2NVX C;  2JA8 C;  3S1R K;  3AD9 C;  2GSO A;  4M1X A;  3H3V D;  1K83 K;  2WB1 L;  4LOW A;  5IOT A;  2JA7 K;  5C44 C;  3PIO S;  1KQ4 A;  2NVX K;  3NUH A;  4GTC A;  5E68 A;  4WFN S;  5IOS A;  4PAB A;  2A68 A;  4A3C C;  1ZVU A;  5C44 K;  3GTP A;  2Y0S D;  4LQY A;  5DM6 S;  4P9S A;  3S14 C;  1WCM C;  2L3U A;  1WQF A;  3S15 C;  3CAG A;  4QJV A;  5FJ8 K;  3S14 K;  1WCM K;  3GTO A;  2JA6 C;  3BP3 A;  3FKI C;  2V6T A;  2P8T A;  3LAP A;  1DD5 A;  3LPX A;  1O27 A;  4YFK A;  5IP7 C;  3L4K A;  2JA6 K;  3CQZ A;  3FKI K;  1IL2 A;  4BBR C;  2R92 A;  3HOW C;  4OIR A;  1FEU A;  5IP7 K;  4J3N A;  3CF5 S;  4BBR K;  1EH1 A;  3HOW K;  1RU0 A;  3A8K A;  1TWF A;  2ZJP S;  2NVY A;  4KMA A;  4KAT A;  3L4J A;  3GTK K;  1BDF A;  1UV7 A;  1TWG A;  1I3Q C;  1K83 A;  4BLB A;  2JA7 A;  3DXJ A;  2RGR A;  2NVX A;  4KN4 A;  3H0G C;  1I3Q K;  3PO3 C;  4KM9 A;  1F9N A;  3H0G K;  4QIW D;  1DCO A;  3M4O C;  3PO3 K;  1IQ0 A;  2XCQ A;  1WCM A;  3M3Y C;  3QX3 A;  3GTG C;  5EGE A;  4C3J C;  5C4X C;  1AB4 A;  1VLO A;  1XZP B;  2E2I K;  4O2D A;  2JA6 A;  3M3Y K;  3GTL K;  3FHZ A;  5L46 A;  4C3J K;  5C4X K;  1I50 A;  4G0W A;  3HOV K;  1ZBS A;  2A6E A;  3DLL S;  4LK1 A;  3SZZ A;  2GAG C;  4GFQ A;  4GTL A;  5CHP A;  1WQG A;  1TWA C;  4YFN A;  3GTK A;  1O2F B;  4KB4 A;  3PIP S;  5IYC C;  3ADA C;  1TWA K;  3GTM K;  2PA8 D;  3S0X A;  2NVQ C;  4A3G C;  1I3Q A;  5EGH A;  2RH6 A;  5IYC K;  1HI9 A;  5JVG S;  5IYD C;  2JH3 A;  2NVQ K;  4A3G K;  3ORE A;  3N0B A;  1R9T A;  5IYD K;  1YX2 A;  4BY1 C;  1Y1V K;  4YFX A;  3GTJ C;  4IOA S;  3GEE A;  4KC6 A;  1SFO K;  2P5M A;  2XCO A;  2BE5 A;  4KDD A;  3GTJ K;  1O29 A;  3T01 A;  2E2I A;  4XSX A;  2A69 A;  1JOE A;  2VUM C;  3GTL A;  4A3D C;  2W7V A;  5CJ9 A;  1EI6 A;  5M3M K;  3TFH A;  4A3F C;  1WQH A;  3EQL A;  2VUM K;  4A3D K;  4A3E K;  3G4C A;  2JA8 K;  2GSU A;  1USO A;  4A3F K;  2KQ1 A;  1O26 A;  4G7O A;  3I4N C;  2XCR B; 
#chains in the Genus database with same CATH homology
 4C3I C;  4QJV B;  4A3B K;  3HOZ C;  4G7Z A;  2E2I C;  2WAQ L;  4LLG A;  4OIP A;  3GTO C;  4A3C K;  2PPB A;  3GTL C;  3GTK K;  1BDF A;  4BY1 K;  3PO2 C;  3HOU K;  1HQM A;  4C3I K;  4MEY A;  4C3H C;  1I3Q C;  5IYB C;  2R7Z C;  3HOV C;  3HOZ K;  3GTO K;  2CW0 A;  3S15 K;  3DXJ A;  4KN4 A;  2JA5 C;  3PO2 K;  4JK1 A;  4LJZ A;  3H0G C;  4YG2 A;  4C3H K;  4A3L C;  1I3Q K;  5IYB K;  2R7Z K;  4LK0 A;  3PO3 C;  3S1N C;  3S2H C;  5M3F K;  2JA5 K;  2O5I A;  4Y52 C;  4A3J K;  3H0G K;  4AYB D;  4QIW L;  4QIW D;  4AYB L;  4A3L K;  3RZD C;  3M4O C;  3GTM C;  3PO3 K;  2YU9 C;  1Y1W C;  3S1N K;  3S2H K;  1YNJ A;  3S1M C;  4Y52 K;  5M5X K;  3HOX C;  3HKZ L;  3HKZ D;  3S16 C;  1TWG C;  3RZD K;  3M3Y C;  2YU9 K;  1XPP A;  5TMF A;  2E2H C;  3GTG C;  3I4N K;  5C3E C;  1ZYR A;  4XSZ A;  4C3J C;  3GTQ C;  1I6V A;  1SMY A;  4OIQ A;  4C2M C;  5C4X C;  3HOX K;  2E2I K;  3S16 K;  2NVT C;  4G7H A;  3S2D C;  5IP9 C;  1TWG K;  3M3Y K;  4ZH4 A;  1TWH C;  1IW7 A;  3GTL K;  3CQZ C;  4NOI A;  2R92 C;  4Q5S A;  1TWC C;  1Y1V C;  4C3J K;  5C4X K;  3GTQ K;  4C2M K;  3HOV K;  4Q4Z A;  2NVT K;  3S2D K;  5IP9 K;  5D4D A;  1SFO C;  2A6E A;  3CQZ K;  5C4J C;  4LK1 A;  4A93 C;  2R92 K;  1TWC K;  4XLN A;  2PMZ L;  2PMZ D;  1TWF C;  1TWA C;  4YFN A;  2NVY C;  4A3I C;  3RZO C;  4A3K C;  1YNN A;  5C4J K;  5M5Y K;  4A93 K;  4MEX A;  4MQ9 A;  3S1R C;  4KN7 A;  4XLP A;  2A6H A;  5IYC C;  1K83 C;  1TWF K;  1TWA K;  4A3I K;  2NVY K;  2PA8 L;  2PA8 D;  4A3K K;  1Y1W K;  3GTM K;  2E2J C;  4A3E C;  4Y7N C;  2JA7 C;  4BY7 C;  3S1M K;  2NVX C;  2JA8 C;  3RZO K;  2NVQ C;  4A3G C;  3S1R K;  5IYC K;  3H3V D;  5FLM C;  1I50 C;  4A3M C;  1K83 K;  2WB1 L;  2WB1 D;  4X6A C;  2E2J K;  2E2H K;  1I6H C;  4Y7N K;  5C44 C;  2JA7 K;  5C3E K;  5TMC A;  2NVX K;  3GTG K;  5IYD C;  2R93 C;  4BY7 K;  2NVQ K;  4A3G K;  4OIO A;  4A3B C;  1I50 K;  5FLM K;  4A3M K;  4GZY A;  2A68 A;  4A3C C;  1TWH K;  4X6A K;  3WOD A;  5C44 K;  2Y0S L;  2Y0S D;  3GTK C;  2B63 C;  2R93 K;  4BY1 C;  1Y1V K;  5IYD K;  4YFX A;  3GTJ C;  3S14 C;  3I4M C;  1WCM C;  2WAQ D;  5M5W K;  1SFO K;  4KMU A;  3S15 C;  4QJV A;  5FJ8 K;  2BE5 A;  3HOY C;  2B63 K;  3GTJ K;  3S14 K;  3I4M K;  1WCM K;  3M4O K;  4XSX A;  2A69 A;  4BBS C;  2JA6 C;  3S17 C;  2VUM C;  4A3D C;  3FKI C;  2O5J A;  3S1Q C;  3HOY K;  4A3J C;  5M3M K;  4OIN A;  4A3F C;  3H3V L;  4YFK A;  5IP7 C;  3EQL A;  4BBS K;  4BXX C;  2JA6 K;  3S17 K;  2VUM K;  4A3D K;  3FKI K;  4A3E K;  3S1Q K;  3K7A C;  4BBR C;  3GTP C;  2JA8 K;  3HOW C;  1R9T C;  4OIR A;  4A3F K;  5IP7 K;  4BXX K;  3I4N C;  1I6H K;  3K7A K;  4BBR K;  3GTP K;  4G7O A;  3HOW K;  3HOU C;  1R9T K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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