4A3JC

Rna polymerase ii initial transcribing complex with a 2nt dna-rna hybrid and soaked with gmpcpp
Total Genus 62
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
62
sequence length
266
structure length
266
Chain Sequence
b'EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD'
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1
publication title Structural Basis of Initial RNA Polymerase II Transcription.
pubmed doi rcsb
molecule tags Transcription
total genus 62
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-09-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 4a3jC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 4a3jC01
2WAQD 3GTPC 5C44C 4ZH4A 3H3VL 2O5IA 2NVXC 4C3JC 3DXJA 4OIPA 4A3DK 4C3HC 4A3MC 4A3KC 5IP9C 3GTLC 3M3YK 4LJZA 4QIWD 4MQ9A 2YU9K 3HOXK 3I4NC 1I50C 1WCMK 3GTGK 3S1QC 4BY7K 1ZYRA 1R9TC 1I6HK 5C3EC 4A3JC 2NVQC 3HOUC 3GTMC 4A3LK 4BY1K 5FLMK 4A3GC 1YNJA 3S1MK 3S15K 3H0GC 5IYDC 5M5YK 3FKIK 4OIRA 3RZOK 4G7HA 2PPBA 4X6AK 3GTJK 3S2HK 3HOVK 4A3CK 3PO2K 5M3MK 2WB1D 2YU9C 3HOXC 4C2MK 4XSZA 1XPPA 5IYCC 4LLGA 3S14K 1TWFC 1WCMC 2PMZL 3HOZK 3GTKK 3S2DK 3K7AC 2R7ZK 1TWGC 2O5JA 5IP7K 1I6VA 2Y0SD 3S1RK 2JA5K 4A3BK 1TWHC 1K83K 2B63K 2VUMK 3GTOK 3HOWK 3PO2C 4AYBL 5C4JK 4BXXK 1IW7A 2PA8L 4A3IK 3HOYK 3S14C 1TWAK 4A3EK 3S2DC 4A3FC 2A68A 2WAQL 5IYBC 5TMFA 2NVTC 2NVYK 4A93K 1I3QK 2R93K 4Y52K 5IP7C 4Q4ZA 1HQMA 3EQLA 3S1RC 2R92K 4A3DC 2JA6K 3S16K 3M3YC 3S1NK 1BDFA 4BBSK 4YFKA 1TWAC 2A69A 5M5WK 2JA7C 3GTGC 4BY7C 1I6HC 4G7ZA 2JA8K 3M4OK 4Y52C 1Y1WK 2E2HK 4A3LC 4BY1C 4YG2A 5FLMC 4QJVB 4YFXA 2A6EA 3S15C 3S1MC 2R92C 4BBRK 4LK0A 1YNNA 3FKIC 4MEXA 2JA6C 3RZOC 2WB1L 4X6AC 3GTJC 4NOIA 3HOVC 3S2HC 4A3CC 3CQZK 3HKZD 3GTQK 4JK1A 4XSXA 3S17K 2PMZD 4C2MC 1TWCK 2JA7K 3GTPK 1SFOK 4Q5SA 2JA8C 3GTKC 2NVXK 4C3JK 4G7OA 2R7ZC 2Y0SL 4QJVA 5TMCA 2CW0A 1Y1WC 3H3VD 1Y1VK 4C3HK 4KN4A 4A3MK 4A3KK 2E2IK 4BBRC 5IP9K 3GTLK 2JA5C 4A3BC 2B63C 1K83C 4KMUA 2VUMC 3GTOC 3HOWC 2PA8D 4QIWL 3GTQC 3I4NK 1I50K 5C4JC 4BXXC 1R9TK 4A3IC 3S17C 3HOYC 5C3EK 3WODA 2BE5A 4A3EC 2NVQK 3GTMK 3HOUK 4A3GK 4XLPA 2A6HA 3H0GK 5IYDK 1Y1VC 2NVYC 4KN7A 1I3QC 4A93C 2R93C 1SMYA 2E2IC 5D4DA 5C4XK 3S16C 4GZYA 4LK1A 5IYCK 4C3IK 4OINA 1TWFK 3PO3K 3S1NC 3RZDK 4BBSC 3K7AK 3I4MK 1TWGK 2E2JK 5M3FK 5C44K 4YFNA 4OIQA 4OIOA 3M4OC 1TWHK 2E2HC 5FJ8K 4Y7NC 5M5XK 3HOZC 5C4XC 3HKZL 4AYBD 1SFOC 4Y7NK 3CQZC 4C3IC 4MEYA 3PO3C 4XLNA 4A3FK 3RZDC 3I4MC 3S1QK 5IYBK 2E2JC 2NVTK 4A3JK 1TWCC
chains in the Genus database with same CATH superfamily
5C44C 3DXJA 4P5BA 4OIPA 2GSNA 3N0CA 4C3HC 1AB4A 3M3YK 2YU9K 3HOXK 4WFNS 1ZBSA 1I50C 5DM7S 5C3EC 2JA5A 1PJ7A 3GTMC 3LAPA 1K83A 4A3LK 2VUMA 2B63A 2KQ1A 5IYDC 4OIRA 3RZOK 4G7HA 3S2HK 3QX3A 3HOVK 1IQ0A 5M3MK 2WB1D 5JVHS 2CFAA 4XSZA 2NVYA 1I3QA 2O5JA 1WORA 2Y0SD 1EFWA 2JA5K 4G0WA 2B63K 1K83K 2GAGC 2VUMK 4G0UA 1ISEA 3S14C 1F9NA 3S2DC 1XXBA 4IO9S 2E2HA 5IYBC 1USOA 1IBAA 5TMFA 4KM9A 2NVYK 1I3QK 3VA7A 4Q4ZA 1HQMA 3EQLA 3S1RC 1IE0A 2JA6K 4GTLA 3GTPA 1XZPA 3M3YC 4BBSK 2NVXA 2KWAA 2PHCB 2XCQA 4G7ZA 2EBBA 4Y52C 2E2HK 3A8KA 4A3LC 4YG2A 2ZFZA 4Y7NK 1PJ6A 3BP8C 4BBRK 3HOZK 3RZOC 3S2HC 1INNA 3HOVC 3HKZD 3GTQK 5CJ9A 4JK1A 3H0GA 3S17K 3GTPK 4WJ3M 2NVXK 4G7OA 4QJVA 4A3MK 1O25A 1WCMA 2JA5C 3AD9C 3NUHA 2B63C 1K83C 2VUMC 3I4NK 1X31C 2V6TA 4BKWA 4KMAA 3HOUK 4P9SA 1TWHA 3H0GK 2NVYC 4KN7A 1I3QC 1SMYA 1FEUA 2XCOA 4O2DA 5IYCK 1WOOA 4FM9A 2CFAB 1WIHA 4BBSC 3K7AK 3I4MK 3FHZA 5C44K 4YFNA 4OIOA 1XZQB 1VRQC 4ILDA 2JH3A 1O27A 1TWHK 2E2HC 5L46A 5FJ8K 4Y7NC 3HOZC 1B4AA 5C4XC 1RU0A 3PO3C 4MEYA 2XCRB 3AD8C 3RZDC 1EH1A 3IPJA 3T02A 3T01A 2WAQD 3GTPC 3N0BA 3H3VL 2NVXC 2Y3PA 3AD7C 3TFHA 3PIOS 4A3DK 4LR2A 4A3MC 1G51A 4LJZA 1DCOA 3GTKA 4GT9A 3I4NC 1Y1WA 1IL2A 1ZYRA 4PAAA 3SZYA 2RGRA 3HOUC 1YNJA 4KMDA 1DCHA 3BP3A 3H0GC 4A3CK 5DM6S 1JQWA 3S14K 5IYCC 1VJEA 3GEHA 1WCMC 3S2DK 2PMZL 3GTKK 3K7AC 3GEIA 3S1RK 4A3BK 1TWHC 3GTOK 3PO2C 1IW7A 2PA8L 1BJTA 1XXAA 5HL8A 1JVIA 4Y52K 4XCHA 5IP7C 4KDDA 1F7VA 4A3DC 1WQFA 1TWCA 2A69A 4P5AA 5M5WK 4G0VA 3GTLA 5IOTA 4LK0A 3GDZA 4GTFA 1R9TA 1EQRA 4A3CC 3DLLS 3G4AA 3Q3QA 1IS1A 1O2BA 2PMZD 1TWCK 2JA8C 3GTKC 4C3JK 1Y1WC 4KARA 3GTLK 4A3BC 3GTOC 1TWGA 4QIWL 2PA8D 3TTGA 1R9TK 1DD5A 4DDQA 3WODA 4GTDA 3L4KA 2NVQK 3CAGA 2ZUEA 4A3GK 1WQGA 4KMHA 1B4BA 3A8IA 4GTAA 5C4XK 4WFBS 3OEPA 4LK1A 3PO3K 3RZDK 3SZZA 3GEEA 4IOCS 1TWGK 5HQHA 5EGEA 1ZXOA 1TWAA 5M5XK 4XLNA 4A3FK 2R92A 2NVTK 1TWCC 1O29A 4ZH4A 4C3JC 3JSTA 5IOQA 1O26A 2ZJQS 3GTLC 4QIWD 3MMLB 2D6FC 1O24A 4KASA 1WCMK 4BY7K 3S1QC 1I6HK 1R9TC 5IOSA 1DCPA 4A3JC 2NVQC 1KQ4A 4A3GC 1F93A 3S1MK 1O2AA 2KXYA 2PPBA 1ZQ1C 1YX2A 4LQYA 4X6AK 3PO2K 3OPFA 4U67S 4C2MK 1XPPA 1Y1VA 4LLGA 4J3NA 5TJ3A 4KC6A 2E2IA 2KPUA 1TWGC 2ZJRS 5IP7K 1J98A 4AYBL 5C4JK 1XZPB 4A3EK 1BS2A 4GTBA 4WFAS 4A3FC 1BGWA 3AQPA 2NVTC 3FOEA 4A93K 1SFOA 3PIPS 2GSUA 1BDFA 3GSIA 1TWAC 3LYWA 4BY7C 1I6HC 2JA8K 3N3YA 1Y1WK 4LOWA 4QJVB 4YFXA 3S1MC 2R92C 2WB1L 1SFOK 4X6AC 1VH2A 2V6UA 4KATA 4C2MC 3V4GA 4Q5SA 2YU9A 2Y0SL 3H3VD 5TMCA 2CW0A 4A3KK 1TWFA 5IP9K 3CF5S 2FQOA 3OREA 4BLBA 4FZBA 5C4JC 3A8JA 3HXAA 4A3EC 2BE5A 1V5VA 1O28A 2A6HA 1J6XA 1C0AA 1Y1VC 4A93C 4WJ4A 2E2IC 2V6SA 5D4DA 5EGHA 4OINA 1O2FB 1TWFK 1EI6A 4KB2A 3GIRA 4KAWX 1L0WA 3GTGA 3HKZL 1SFOC 3TFJA 4C3IC 3S1QK 2E2JC 3FKIA 4WILA 4A3JK 2JA6A 5E68A 3GTJA 1XZQA 3FOFA 2O5IA 2P5MA 1WSRA 4A3KC 2GSOA 3BUEA 5IP9C 5JFEA 4MQ9A 1XXCA 2R7ZA 3GTGK 4C45A 4BY1K 5FLMK 3GTQA 3S15K 5IORA 5M5YK 4RMFA 3FKIK 1WSVA 4WCES 3GTJK 2RH6A 2YU9C 3HOXC 2R93A 1TWFC 1YCLA 4BLAA 2R7ZK 3G4CA 1I6VA 1USMA 3AQOA 1VGXA 2W7VA 3HOWK 4BXXK 4AH6A 4A3IK 3HOYK 1TWAK 2A68A 2WAQL 4KB4A 1WOSA 2R93K 3CQZA 5CHPA 3L4JA 2R92K 3S16K 1WOPA 3AH5A 2JA7A 3S1NK 5JVGS 4WF9S 1GE9A 4YFKA 1J6WA 3GTGC 4PABA 3M4OK 4KM8A 4BY1C 5FLMC 2A6EA 3S15C 1UV7A 1JOEA 1I50A 1YNNA 3FKIC 4MEXA 2JA6C 1HI9A 3GTJC 4NOIA 1EK8A 3CQZK 3T00A 3GTMA 3LAJA 4XSXA 5HL7S 2JA7K 2R7ZC 1Y1VK 3ADAC 4C3HK 4KN4A 2E2IK 4BBRC 1VLOA 3LPXA 3TFIA 4KMUA 3HOWC 2L3UA 3GTQC 1ZVUA 1I50K 4BXXC 2GAHC 4A3IC 3S17C 3HOYC 5C3EK 2ZUFA 3GTMK 4XLPA 5IYDK 1PJ5A 2R93C 3ERED 1WQHA 2FQTA 3S16C 4GZYA 1J6VA 4GTCA 4C3IK 2P8TA 3S1NC 2ZJPS 4GFQA 2E2JK 5M3FK 3GTOA 4GTEA 4OIQA 4M1XA 1F7UA 3M4OC 2L5NA 4AYBD 3CQZC 3S0XA 4IOAS 3I4MC 5JVOA 5IYBK 2JA7C
chains in the Genus database with same CATH topology
2WAQD 3GTPC 5C44C 4ZH4A 3H3VL 2O5IA 2NVXC 4C3JC 3DXJA 4OIPA 4A3DK 4C3HC 4A3MC 4A3KC 5IP9C 3GTLC 3M3YK 4LJZA 4QIWD 4MQ9A 2YU9K 3HOXK 3I4NC 1I50C 1WCMK 3GTGK 3S1QC 4BY7K 1ZYRA 1R9TC 1I6HK 5C3EC 4A3JC 2NVQC 3HOUC 3GTMC 4A3LK 4BY1K 5FLMK 4A3GC 1YNJA 3S1MK 3S15K 3H0GC 5IYDC 5M5YK 3FKIK 4OIRA 3RZOK 4G7HA 2PPBA 4X6AK 3GTJK 3S2HK 3HOVK 4A3CK 3PO2K 5M3MK 2WB1D 2YU9C 3HOXC 4C2MK 4XSZA 1XPPA 5IYCC 4LLGA 3S14K 1TWFC 1WCMC 2PMZL 3HOZK 3GTKK 3S2DK 3K7AC 2R7ZK 1TWGC 2O5JA 5IP7K 1I6VA 2Y0SD 3S1RK 2JA5K 4A3BK 1TWHC 1K83K 2B63K 2VUMK 3GTOK 3HOWK 3PO2C 4AYBL 5C4JK 4BXXK 1IW7A 2PA8L 4A3IK 3HOYK 3S14C 1TWAK 4A3EK 3S2DC 4A3FC 2A68A 2WAQL 5IYBC 5TMFA 2NVTC 2NVYK 4A93K 1I3QK 2R93K 4Y52K 5IP7C 4Q4ZA 1HQMA 3EQLA 3S1RC 2R92K 4A3DC 2JA6K 3S16K 3M3YC 3S1NK 1BDFA 4BBSK 4YFKA 1TWAC 2A69A 5M5WK 2JA7C 3GTGC 4BY7C 1I6HC 4G7ZA 2JA8K 3M4OK 4Y52C 1Y1WK 2E2HK 4A3LC 4BY1C 4YG2A 5FLMC 4QJVB 4YFXA 2A6EA 3S15C 3S1MC 2R92C 4BBRK 4LK0A 1YNNA 3FKIC 4MEXA 2JA6C 3RZOC 2WB1L 4X6AC 3GTJC 4NOIA 3HOVC 3S2HC 4A3CC 3CQZK 3HKZD 3GTQK 4JK1A 4XSXA 3S17K 2PMZD 4C2MC 1TWCK 2JA7K 3GTPK 1SFOK 4Q5SA 2JA8C 3GTKC 2NVXK 4C3JK 4G7OA 2R7ZC 2Y0SL 4QJVA 5TMCA 2CW0A 1Y1WC 3H3VD 1Y1VK 4C3HK 4KN4A 4A3MK 4A3KK 2E2IK 4BBRC 5IP9K 3GTLK 2JA5C 4A3BC 2B63C 1K83C 4KMUA 2VUMC 3GTOC 3HOWC 2PA8D 4QIWL 3GTQC 3I4NK 1I50K 5C4JC 4BXXC 1R9TK 4A3IC 3S17C 3HOYC 5C3EK 3WODA 2BE5A 4A3EC 2NVQK 3GTMK 3HOUK 4A3GK 4XLPA 2A6HA 3H0GK 5IYDK 1Y1VC 2NVYC 4KN7A 1I3QC 4A93C 2R93C 1SMYA 2E2IC 5D4DA 5C4XK 3S16C 4GZYA 4LK1A 5IYCK 4C3IK 4OINA 1TWFK 3PO3K 3S1NC 3RZDK 4BBSC 3K7AK 3I4MK 1TWGK 2E2JK 5M3FK 5C44K 4YFNA 4OIQA 4OIOA 3M4OC 1TWHK 2E2HC 5FJ8K 4Y7NC 5M5XK 3HOZC 5C4XC 3HKZL 4AYBD 1SFOC 4Y7NK 3CQZC 4C3IC 4MEYA 3PO3C 4XLNA 4A3FK 3RZDC 3I4MC 3S1QK 5IYBK 2E2JC 2NVTK 4A3JK 1TWCC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2WAQ D;  3GTP C;  5C44 C;  4ZH4 A;  3H3V L;  2O5I A;  2NVX C;  4C3J C;  3DXJ A;  4OIP A;  4A3D K;  4C3H C;  4A3M C;  4A3K C;  5IP9 C;  3GTL C;  3M3Y K;  4LJZ A;  4QIW D;  4MQ9 A;  2YU9 K;  3HOX K;  3I4N C;  1I50 C;  1WCM K;  3GTG K;  3S1Q C;  4BY7 K;  1ZYR A;  1R9T C;  1I6H K;  5C3E C;  4A3J C;  2NVQ C;  3HOU C;  3GTM C;  4A3L K;  4BY1 K;  5FLM K;  4A3G C;  1YNJ A;  3S1M K;  3S15 K;  3H0G C;  5IYD C;  5M5Y K;  3FKI K;  4OIR A;  3RZO K;  4G7H A;  2PPB A;  4X6A K;  3GTJ K;  3S2H K;  3HOV K;  4A3C K;  3PO2 K;  5M3M K;  2WB1 D;  2YU9 C;  3HOX C;  4C2M K;  4XSZ A;  1XPP A;  5IYC C;  4LLG A;  3S14 K;  1TWF C;  1WCM C;  2PMZ L;  3HOZ K;  3GTK K;  3S2D K;  3K7A C;  2R7Z K;  1TWG C;  2O5J A;  5IP7 K;  1I6V A;  2Y0S D;  3S1R K;  2JA5 K;  4A3B K;  1TWH C;  1K83 K;  2B63 K;  2VUM K;  3GTO K;  3HOW K;  3PO2 C;  4AYB L;  5C4J K;  4BXX K;  1IW7 A;  2PA8 L;  4A3I K;  3HOY K;  3S14 C;  1TWA K;  4A3E K;  3S2D C;  4A3F C;  2A68 A;  2WAQ L;  5IYB C;  5TMF A;  2NVT C;  2NVY K;  4A93 K;  1I3Q K;  2R93 K;  4Y52 K;  5IP7 C;  4Q4Z A;  1HQM A;  3EQL A;  3S1R C;  2R92 K;  4A3D C;  2JA6 K;  3S16 K;  3M3Y C;  3S1N K;  1BDF A;  4BBS K;  4YFK A;  1TWA C;  2A69 A;  5M5W K;  2JA7 C;  3GTG C;  4BY7 C;  1I6H C;  4G7Z A;  2JA8 K;  3M4O K;  4Y52 C;  1Y1W K;  2E2H K;  4A3L C;  4BY1 C;  4YG2 A;  5FLM C;  4QJV B;  4YFX A;  2A6E A;  3S15 C;  3S1M C;  2R92 C;  4BBR K;  4LK0 A;  1YNN A;  3FKI C;  4MEX A;  2JA6 C;  3RZO C;  2WB1 L;  4X6A C;  3GTJ C;  4NOI A;  3HOV C;  3S2H C;  4A3C C;  3CQZ K;  3HKZ D;  3GTQ K;  4JK1 A;  4XSX A;  3S17 K;  2PMZ D;  4C2M C;  1TWC K;  2JA7 K;  3GTP K;  1SFO K;  4Q5S A;  2JA8 C;  3GTK C;  2NVX K;  4C3J K;  4G7O A;  2R7Z C;  2Y0S L;  4QJV A;  5TMC A;  2CW0 A;  1Y1W C;  3H3V D;  1Y1V K;  4C3H K;  4KN4 A;  4A3M K;  4A3K K;  2E2I K;  4BBR C;  5IP9 K;  3GTL K;  2JA5 C;  4A3B C;  2B63 C;  1K83 C;  4KMU A;  2VUM C;  3GTO C;  3HOW C;  2PA8 D;  4QIW L;  3GTQ C;  3I4N K;  1I50 K;  5C4J C;  4BXX C;  1R9T K;  4A3I C;  3S17 C;  3HOY C;  5C3E K;  3WOD A;  2BE5 A;  4A3E C;  2NVQ K;  3GTM K;  3HOU K;  4A3G K;  4XLP A;  2A6H A;  3H0G K;  5IYD K;  1Y1V C;  2NVY C;  4KN7 A;  1I3Q C;  4A93 C;  2R93 C;  1SMY A;  2E2I C;  5D4D A;  5C4X K;  3S16 C;  4GZY A;  4LK1 A;  5IYC K;  4C3I K;  4OIN A;  1TWF K;  3PO3 K;  3S1N C;  3RZD K;  4BBS C;  3K7A K;  3I4M K;  1TWG K;  2E2J K;  5M3F K;  5C44 K;  4YFN A;  4OIQ A;  4OIO A;  3M4O C;  1TWH K;  2E2H C;  5FJ8 K;  4Y7N C;  5M5X K;  3HOZ C;  5C4X C;  3HKZ L;  4AYB D;  1SFO C;  4Y7N K;  3CQZ C;  4C3I C;  4MEY A;  3PO3 C;  4XLN A;  4A3F K;  3RZD C;  3I4M C;  3S1Q K;  5IYB K;  2E2J C;  2NVT K;  4A3J K;  1TWC C; 
#chains in the Genus database with same CATH topology
 5C44 C;  3DXJ A;  4P5B A;  4OIP A;  2GSN A;  3N0C A;  4C3H C;  1AB4 A;  3M3Y K;  2YU9 K;  3HOX K;  4WFN S;  1ZBS A;  1I50 C;  5DM7 S;  5C3E C;  2JA5 A;  1PJ7 A;  3GTM C;  3LAP A;  1K83 A;  4A3L K;  2VUM A;  2B63 A;  2KQ1 A;  5IYD C;  4OIR A;  3RZO K;  4G7H A;  3S2H K;  3QX3 A;  3HOV K;  1IQ0 A;  5M3M K;  2WB1 D;  5JVH S;  2CFA A;  4XSZ A;  2NVY A;  1I3Q A;  2O5J A;  1WOR A;  2Y0S D;  1EFW A;  2JA5 K;  4G0W A;  2B63 K;  1K83 K;  2GAG C;  2VUM K;  4G0U A;  1ISE A;  3S14 C;  1F9N A;  3S2D C;  1XXB A;  4IO9 S;  2E2H A;  5IYB C;  1USO A;  1IBA A;  5TMF A;  4KM9 A;  2NVY K;  1I3Q K;  3VA7 A;  4Q4Z A;  1HQM A;  3EQL A;  3S1R C;  1IE0 A;  2JA6 K;  4GTL A;  3GTP A;  1XZP A;  3M3Y C;  4BBS K;  2NVX A;  2KWA A;  2PHC B;  2XCQ A;  4G7Z A;  2EBB A;  4Y52 C;  2E2H K;  3A8K A;  4A3L C;  4YG2 A;  2ZFZ A;  4Y7N K;  1PJ6 A;  3BP8 C;  4BBR K;  3HOZ K;  3RZO C;  3S2H C;  1INN A;  3HOV C;  3HKZ D;  3GTQ K;  5CJ9 A;  4JK1 A;  3H0G A;  3S17 K;  3GTP K;  4WJ3 M;  2NVX K;  4G7O A;  4QJV A;  4A3M K;  1O25 A;  1WCM A;  2JA5 C;  3AD9 C;  3NUH A;  2B63 C;  1K83 C;  2VUM C;  3I4N K;  1X31 C;  2V6T A;  4BKW A;  4KMA A;  3HOU K;  4P9S A;  1TWH A;  3H0G K;  2NVY C;  4KN7 A;  1I3Q C;  1SMY A;  1FEU A;  2XCO A;  4O2D A;  5IYC K;  1WOO A;  4FM9 A;  2CFA B;  1WIH A;  4BBS C;  3K7A K;  3I4M K;  3FHZ A;  5C44 K;  4YFN A;  4OIO A;  1XZQ B;  1VRQ C;  4ILD A;  2JH3 A;  1O27 A;  1TWH K;  2E2H C;  5L46 A;  5FJ8 K;  4Y7N C;  3HOZ C;  1B4A A;  5C4X C;  1RU0 A;  3PO3 C;  4MEY A;  2XCR B;  3AD8 C;  3RZD C;  1EH1 A;  3IPJ A;  3T02 A;  3T01 A;  2WAQ D;  3GTP C;  3N0B A;  3H3V L;  2NVX C;  2Y3P A;  3AD7 C;  3TFH A;  3PIO S;  4A3D K;  4LR2 A;  4A3M C;  1G51 A;  4LJZ A;  1DCO A;  3GTK A;  4GT9 A;  3I4N C;  1Y1W A;  1IL2 A;  1ZYR A;  4PAA A;  3SZY A;  2RGR A;  3HOU C;  1YNJ A;  4KMD A;  1DCH A;  3BP3 A;  3H0G C;  4A3C K;  5DM6 S;  1JQW A;  3S14 K;  5IYC C;  1VJE A;  3GEH A;  1WCM C;  3S2D K;  2PMZ L;  3GTK K;  3K7A C;  3GEI A;  3S1R K;  4A3B K;  1TWH C;  3GTO K;  3PO2 C;  1IW7 A;  2PA8 L;  1BJT A;  1XXA A;  5HL8 A;  1JVI A;  4Y52 K;  4XCH A;  5IP7 C;  4KDD A;  1F7V A;  4A3D C;  1WQF A;  1TWC A;  2A69 A;  4P5A A;  5M5W K;  4G0V A;  3GTL A;  5IOT A;  4LK0 A;  3GDZ A;  4GTF A;  1R9T A;  1EQR A;  4A3C C;  3DLL S;  3G4A A;  3Q3Q A;  1IS1 A;  1O2B A;  2PMZ D;  1TWC K;  2JA8 C;  3GTK C;  4C3J K;  1Y1W C;  4KAR A;  3GTL K;  4A3B C;  3GTO C;  1TWG A;  4QIW L;  2PA8 D;  3TTG A;  1R9T K;  1DD5 A;  4DDQ A;  3WOD A;  4GTD A;  3L4K A;  2NVQ K;  3CAG A;  2ZUE A;  4A3G K;  1WQG A;  4KMH A;  1B4B A;  3A8I A;  4GTA A;  5C4X K;  4WFB S;  3OEP A;  4LK1 A;  3PO3 K;  3RZD K;  3SZZ A;  3GEE A;  4IOC S;  1TWG K;  5HQH A;  5EGE A;  1ZXO A;  1TWA A;  5M5X K;  4XLN A;  4A3F K;  2R92 A;  2NVT K;  1TWC C;  1O29 A;  4ZH4 A;  4C3J C;  3JST A;  5IOQ A;  1O26 A;  2ZJQ S;  3GTL C;  4QIW D;  3MML B;  2D6F C;  1O24 A;  4KAS A;  1WCM K;  4BY7 K;  3S1Q C;  1I6H K;  1R9T C;  5IOS A;  1DCP A;  4A3J C;  2NVQ C;  1KQ4 A;  4A3G C;  1F93 A;  3S1M K;  1O2A A;  2KXY A;  2PPB A;  1ZQ1 C;  1YX2 A;  4LQY A;  4X6A K;  3PO2 K;  3OPF A;  4U67 S;  4C2M K;  1XPP A;  1Y1V A;  4LLG A;  4J3N A;  5TJ3 A;  4KC6 A;  2E2I A;  2KPU A;  1TWG C;  2ZJR S;  5IP7 K;  1J98 A;  4AYB L;  5C4J K;  1XZP B;  4A3E K;  1BS2 A;  4GTB A;  4WFA S;  4A3F C;  1BGW A;  3AQP A;  2NVT C;  3FOE A;  4A93 K;  1SFO A;  3PIP S;  2GSU A;  1BDF A;  3GSI A;  1TWA C;  3LYW A;  4BY7 C;  1I6H C;  2JA8 K;  3N3Y A;  1Y1W K;  4LOW A;  4QJV B;  4YFX A;  3S1M C;  2R92 C;  2WB1 L;  1SFO K;  4X6A C;  1VH2 A;  2V6U A;  4KAT A;  4C2M C;  3V4G A;  4Q5S A;  2YU9 A;  2Y0S L;  3H3V D;  5TMC A;  2CW0 A;  4A3K K;  1TWF A;  5IP9 K;  3CF5 S;  2FQO A;  3ORE A;  4BLB A;  4FZB A;  5C4J C;  3A8J A;  3HXA A;  4A3E C;  2BE5 A;  1V5V A;  1O28 A;  2A6H A;  1J6X A;  1C0A A;  1Y1V C;  4A93 C;  4WJ4 A;  2E2I C;  2V6S A;  5D4D A;  5EGH A;  4OIN A;  1O2F B;  1TWF K;  1EI6 A;  4KB2 A;  3GIR A;  4KAW X;  1L0W A;  3GTG A;  3HKZ L;  1SFO C;  3TFJ A;  4C3I C;  3S1Q K;  2E2J C;  3FKI A;  4WIL A;  4A3J K;  2JA6 A;  5E68 A;  3GTJ A;  1XZQ A;  3FOF A;  2O5I A;  2P5M A;  1WSR A;  4A3K C;  2GSO A;  3BUE A;  5IP9 C;  5JFE A;  4MQ9 A;  1XXC A;  2R7Z A;  3GTG K;  4C45 A;  4BY1 K;  5FLM K;  3GTQ A;  3S15 K;  5IOR A;  5M5Y K;  4RMF A;  3FKI K;  1WSV A;  4WCE S;  3GTJ K;  2RH6 A;  2YU9 C;  3HOX C;  2R93 A;  1TWF C;  1YCL A;  4BLA A;  2R7Z K;  3G4C A;  1I6V A;  1USM A;  3AQO A;  1VGX A;  2W7V A;  3HOW K;  4BXX K;  4AH6 A;  4A3I K;  3HOY K;  1TWA K;  2A68 A;  2WAQ L;  4KB4 A;  1WOS A;  2R93 K;  3CQZ A;  5CHP A;  3L4J A;  2R92 K;  3S16 K;  1WOP A;  3AH5 A;  2JA7 A;  3S1N K;  5JVG S;  4WF9 S;  1GE9 A;  4YFK A;  1J6W A;  3GTG C;  4PAB A;  3M4O K;  4KM8 A;  4BY1 C;  5FLM C;  2A6E A;  3S15 C;  1UV7 A;  1JOE A;  1I50 A;  1YNN A;  3FKI C;  4MEX A;  2JA6 C;  1HI9 A;  3GTJ C;  4NOI A;  1EK8 A;  3CQZ K;  3T00 A;  3GTM A;  3LAJ A;  4XSX A;  5HL7 S;  2JA7 K;  2R7Z C;  1Y1V K;  3ADA C;  4C3H K;  4KN4 A;  2E2I K;  4BBR C;  1VLO A;  3LPX A;  3TFI A;  4KMU A;  3HOW C;  2L3U A;  3GTQ C;  1ZVU A;  1I50 K;  4BXX C;  2GAH C;  4A3I C;  3S17 C;  3HOY C;  5C3E K;  2ZUF A;  3GTM K;  4XLP A;  5IYD K;  1PJ5 A;  2R93 C;  3ERE D;  1WQH A;  2FQT A;  3S16 C;  4GZY A;  1J6V A;  4GTC A;  4C3I K;  2P8T A;  3S1N C;  2ZJP S;  4GFQ A;  2E2J K;  5M3F K;  3GTO A;  4GTE A;  4OIQ A;  4M1X A;  1F7U A;  3M4O C;  2L5N A;  4AYB D;  3CQZ C;  3S0X A;  4IOA S;  3I4M C;  5JVO A;  5IYB K;  2JA7 C; 
#chains in the Genus database with same CATH homology
 2WAQ D;  3GTP C;  5C44 C;  4ZH4 A;  3H3V L;  2O5I A;  2NVX C;  4C3J C;  3DXJ A;  4OIP A;  4A3D K;  4C3H C;  4A3M C;  4A3K C;  5IP9 C;  3GTL C;  3M3Y K;  4LJZ A;  4QIW D;  4MQ9 A;  2YU9 K;  3HOX K;  3I4N C;  1I50 C;  1WCM K;  3GTG K;  3S1Q C;  4BY7 K;  1ZYR A;  1R9T C;  1I6H K;  5C3E C;  4A3J C;  2NVQ C;  3HOU C;  3GTM C;  4A3L K;  4BY1 K;  5FLM K;  4A3G C;  1YNJ A;  3S1M K;  3S15 K;  3H0G C;  5IYD C;  5M5Y K;  3FKI K;  4OIR A;  3RZO K;  4G7H A;  2PPB A;  4X6A K;  3GTJ K;  3S2H K;  3HOV K;  4A3C K;  3PO2 K;  5M3M K;  2WB1 D;  2YU9 C;  3HOX C;  4C2M K;  4XSZ A;  1XPP A;  5IYC C;  4LLG A;  3S14 K;  1TWF C;  1WCM C;  2PMZ L;  3HOZ K;  3GTK K;  3S2D K;  3K7A C;  2R7Z K;  1TWG C;  2O5J A;  5IP7 K;  1I6V A;  2Y0S D;  3S1R K;  2JA5 K;  4A3B K;  1TWH C;  1K83 K;  2B63 K;  2VUM K;  3GTO K;  3HOW K;  3PO2 C;  4AYB L;  5C4J K;  4BXX K;  1IW7 A;  2PA8 L;  4A3I K;  3HOY K;  3S14 C;  1TWA K;  4A3E K;  3S2D C;  4A3F C;  2A68 A;  2WAQ L;  5IYB C;  5TMF A;  2NVT C;  2NVY K;  4A93 K;  1I3Q K;  2R93 K;  4Y52 K;  5IP7 C;  4Q4Z A;  1HQM A;  3EQL A;  3S1R C;  2R92 K;  4A3D C;  2JA6 K;  3S16 K;  3M3Y C;  3S1N K;  1BDF A;  4BBS K;  4YFK A;  1TWA C;  2A69 A;  5M5W K;  2JA7 C;  3GTG C;  4BY7 C;  1I6H C;  4G7Z A;  2JA8 K;  3M4O K;  4Y52 C;  1Y1W K;  2E2H K;  4A3L C;  4BY1 C;  4YG2 A;  5FLM C;  4QJV B;  4YFX A;  2A6E A;  3S15 C;  3S1M C;  2R92 C;  4BBR K;  4LK0 A;  1YNN A;  3FKI C;  4MEX A;  2JA6 C;  3RZO C;  2WB1 L;  4X6A C;  3GTJ C;  4NOI A;  3HOV C;  3S2H C;  4A3C C;  3CQZ K;  3HKZ D;  3GTQ K;  4JK1 A;  4XSX A;  3S17 K;  2PMZ D;  4C2M C;  1TWC K;  2JA7 K;  3GTP K;  1SFO K;  4Q5S A;  2JA8 C;  3GTK C;  2NVX K;  4C3J K;  4G7O A;  2R7Z C;  2Y0S L;  4QJV A;  5TMC A;  2CW0 A;  1Y1W C;  3H3V D;  1Y1V K;  4C3H K;  4KN4 A;  4A3M K;  4A3K K;  2E2I K;  4BBR C;  5IP9 K;  3GTL K;  2JA5 C;  4A3B C;  2B63 C;  1K83 C;  4KMU A;  2VUM C;  3GTO C;  3HOW C;  2PA8 D;  4QIW L;  3GTQ C;  3I4N K;  1I50 K;  5C4J C;  4BXX C;  1R9T K;  4A3I C;  3S17 C;  3HOY C;  5C3E K;  3WOD A;  2BE5 A;  4A3E C;  2NVQ K;  3GTM K;  3HOU K;  4A3G K;  4XLP A;  2A6H A;  3H0G K;  5IYD K;  1Y1V C;  2NVY C;  4KN7 A;  1I3Q C;  4A93 C;  2R93 C;  1SMY A;  2E2I C;  5D4D A;  5C4X K;  3S16 C;  4GZY A;  4LK1 A;  5IYC K;  4C3I K;  4OIN A;  1TWF K;  3PO3 K;  3S1N C;  3RZD K;  4BBS C;  3K7A K;  3I4M K;  1TWG K;  2E2J K;  5M3F K;  5C44 K;  4YFN A;  4OIQ A;  4OIO A;  3M4O C;  1TWH K;  2E2H C;  5FJ8 K;  4Y7N C;  5M5X K;  3HOZ C;  5C4X C;  3HKZ L;  4AYB D;  1SFO C;  4Y7N K;  3CQZ C;  4C3I C;  4MEY A;  3PO3 C;  4XLN A;  4A3F K;  3RZD C;  3I4M C;  3S1Q K;  5IYB K;  2E2J C;  2NVT K;  4A3J K;  1TWC C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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