4A3JC

Rna polymerase ii initial transcribing complex with a 2nt dna-rna hybrid and soaked with gmpcpp
Total Genus 62
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
62
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural Basis of Initial RNA Polymerase II Transcription.
pubmed doi rcsb
molecule tags Transcription
molecule keywords DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1
total genus 62
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-09-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 4a3jC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 4a3jC01
4C3HK 4QJVA 2YU9K 4ZH4A 5M5WK 4A3JC 2WAQL 4Y7NK 2JA8K 3GTGK 3H0GC 3HOZK 1XPPA 1Y1WC 4QJVB 3S15K 5IYBK 4A3CC 1WCMK 2R92K 3S16K 4A3BK 3GTKC 3RZOC 3DXJA 3GTGC 3WODA 2PMZL 3S1RC 2JA7K 1I50K 5M5XK 3I4NC 2NVTK 2WB1D 4XSZA 1K83C 4KMUA 3S1RK 4JK1A 1R9TK 3GTMK 5IP9C 4X6AK 3H3VD 5C4JK 2A6EA 3HOYC 4MQ9A 1R9TC 4MEXA 5TMFA 4XSXA 3M3YK 5D4DA 1IW7A 3GTLC 1I3QK 1Y1VK 5IYCK 1YNJA 1YNNA 3HKZD 5IYDC 1TWFK 4LLGA 3FKIK 4A93K 3HOVK 3S1NC 2NVQC 1I6HC 4A3DK 4A3EC 2CW0A 2YU9C 4A3KK 2PPBA 4OIRA 1ZYRA 4Y52K 4A3DC 2NVQK 2E2IC 4A3EK 1TWGC 4Y52C 4A3KC 1WCMC 4KN7A 4MEYA 3S16C 4BY7C 3CQZK 3HOXK 2VUMC 3GTQK 4BBSK 2Y0SL 4NOIA 1HQMA 3S17K 2Y0SD 2NVTC 2WB1L 3RZDC 5C4XC 3S2HC 2PA8D 2JA6K 2B63C 2R92C 5C44C 3GTKK 4X6AC 2PA8L 5C4JC 2E2JC 4YFXA 5C44K 5FLMC 3I4MC 3I4NK 3HOUK 5TMCA 1K83K 1I3QC 1TWHK 5IYCC 4A3MC 4A3GK 5FLMK 3I4MK 3GTOC 3HOUC 5IP7C 4KN4A 2WAQD 3FKIC 1SMYA 4LK0A 3HOYK 4OIPA 4AYBL 1SFOC 1Y1VC 2A68A 4C3JC 4C3IC 4BXXC 1TWCK 2NVXK 3M4OC 3PO3C 4BY1K 3S1MC 4A3FK 1I6HK 4BBSC 2VUMK 1Y1WK 1TWAC 4BBRK 3S15C 3M4OK 2O5IA 3PO2K 2E2IK 3S2HK 5C3EC 5M5YK 5M3FK 3GTPK 3S1QK 5IYBC 4A3BC 3S14C 4A3IK 2R93K 4C2MK 4G7OA 3GTPC 4YFKA 3S1QC 2JA6C 4A3GC 3HOWC 4A3MK 2B63K 3K7AK 2R7ZK 4A3LK 2JA5K 3HOWK 5IP9K 3HKZL 3GTJK 2A6HA 3HOVC 3GTOK 3GTLK 5IP7K 4YG2A 2O5JA 4OIOA 1I6VA 4BBRC 3EQLA 2NVYC 1TWAK 3H3VL 3CQZC 3S1NK 4Y7NC 2E2HC 3HOZC 1TWCC 3H0GK 4BXXK 2BE5A 4LK1A 2NVXC 2NVYK 4BY1C 4QIWL 5C3EK 3S17C 3PO3K 4C3HC 3RZOK 4LJZA 2JA7C 4Q5SA 3RZDK 4GZYA 4YFNA 3HOXC 3GTQC 3PO2C 2JA8C 4BY7K 2E2JK 2A69A 4A3CK 3GTMC 3K7AC 2R7ZC 4A3LC 1TWHC 5C4XK 1I50C 5FJ8K 4A3IC 2R93C 3S14K 4C2MC 4QIWD 3S2DK 1SFOK 3S2DC 4A93C 4AYBD 5IYDK 4G7ZA 2JA5C 4C3JK 4XLNA 3M3YC 4XLPA 4C3IK 3GTJC 2PMZD 4A3FC 3S1MK 2E2HK 4G7HA 1TWGK 1TWFC 4OIQA 5M3MK 4Q4ZA 4OINA 1BDFA 4A3JK
chains in the Genus database with same CATH superfamily
1TWFA 4KMAA 5M5WK 4Y7NK 3TFIA 3HOZK 5HQHA 1UV7A 3AD7C 3S16K 1XXBA 3S1RC 5JVGS 1VJEA 1K83C 5JVHS 3S1RK 4JK1A 1R9TK 3GTMK 1R9TA 4X6AK 3JSTA 3GEIA 5C4JK 3HOYC 1R9TC 5JFEA 1Y1VK 4BLAA 4A93K 1TWFK 2NVQC 4A3EC 1WIHA 4A3EK 2GSUA 1TWCA 4KB2A 2VUMC 4G0UA 2R92A 5E68A 2JA6K 2R92C 1G51A 5C44C 3GTKK 4X6AC 3CF5S 5JVOA 1VH2A 3A8IA 3HOUK 1DCHA 1ZVUA 4A3GK 1IBAA 1F7UA 1O29A 3HOUC 3HOYK 2WAQD 1IQ0A 1JOEA 4KB4A 1BGWA 1C0AA 4DDQA 3OREA 3NUHA 3SZYA 2VUMK 4J3NA 2O5IA 2E2IK 4GTDA 4KM8A 5C3EC 3FOFA 3S1QK 4C2MK 1USMA 3HOWC 1B4AA 1XXAA 1WORA 2W7VA 2V6SA 3QX3A 3N3YA 4YG2A 4BBRC 2NVYC 3IPJA 2YU9A 3HOZC 4BXXK 2NVXC 4QIWL 3PO3K 4C3HC 2L5NA 4LJZA 4Q5SA 1ZQ1C 4P5AA 3HXAA 2A69A 4A3CK 3Q3QA 5C4XK 5FJ8K 2JH3A 3S2DK 3SZZA 3S2DC 2XCQA 4A93C 1O2AA 2JA5C 4XLNA 2PMZD 1Y1VA 4C3HK 4QJVA 2YU9K 4BKWA 4BLBA 2JA8K 3GTGK 1XPPA 3GTGA 4KARA 1RU0A 4XCHA 5IYBK 4A3BK 3GTKC 3GTGC 1O24A 1B4BA 2WB1D 4XSZA 2XCOA 5IOSA 1JVIA 3H3VD 1J6WA 2A6EA 3DLLS 2GSNA 2JA6A 3M3YK 5D4DA 3TFJA 1J6XA 3N0CA 5IYCK 5CHPA 3HKZD 2KXYA 1YX2A 3L4JA 3LYWA 1WSVA 5L46A 4RMFA 1ZYRA 5HL8A 2NVQK 4GTLA 2E2IC 1TWGC 4AH6A 4Y52C 4KMDA 1WCMC 4G0VA 1O2BA 3GTQK 1HQMA 1L0WA 2Y0SD 5EGHA 4KMHA 2PA8L 3TFHA 5C4JC 2E2JC 3N0BA 4YFXA 1TWHA 5TMCA 1K83K 1I3QC 3OEPA 4A3MC 3TTGA 2XCRB 1IE0A 5IP7C 3FKIC 3PIPS 3AH5A 2CFAA 2RH6A 3T01A 1TWCK 2PHCB 3M4OC 4BY1K 3S1MC 3GSIA 4BBSC 1TWAC 3S15C 3M4OK 2D6FC 2GAGC 1DCPA 1TWAA 2GSOA 3S2HK 5M3FK 1WOSA 2EBBA 3ERED 1EQRA 5IYBC 4A3BC 4G7OA 1IL2A 4A3MK 2R7ZK 1INNA 3HOVC 3ADAC 1WSRA 3GTLK 2ZJQS 2O5JA 4G0WA 4OIOA 2ZUEA 2P8TA 1I6VA 4GTEA 3EQLA 1TWAK 4Y7NC 1KQ4A 1WOPA 3H0GK 4KASA 1DD5A 2JA7C 3RZDK 1EH1A 4LOWA 4LQYA 3HOXC 4BY7K 2JA7A 3G4CA 1GE9A 1I50C 2R93C 3S14K 1I50A 2FQTA 3GTOA 3AQPA 4P9SA 5CJ9A 4AYBD 2KPUA 2E2HK 4G7HA 3BP3A 1BDFA 3MMLB 3OPFA 4A3JC 2WAQL 4WCES 5EGEA 3V4GA 3GIRA 1Y1WC 4M1XA 4QJVB 3LAPA 3S15K 1WCMK 2R92K 3RZOC 1Y1WA 2JA7K 1ISEA 2PMZL 1I50K 2NVTK 5IOTA 4MQ9A 1EI6A 1EK8A 4P5BA 5HL7S 3GTLC 4LR2A 1ZXOA 1YNNA 5IYDC 2ZJRS 3FKIK 4WFAS 3HOVK 3AD9C 1O27A 4A3DK 2E2HA 4A3KK 2PPBA 4WILA 4A3KC 3GDZA 4KN7A 2NVXA 4NOIA 3S17K 3LPXA 4WJ4A 2PA8D 3I4NK 1XZPA 5FLMC 3I4MC 5C44K 1ZBSA 5IYCC 1XXCA 1SMYA 4OIPA 1SFOC 1HI9A 2JA5A 1SFOA 1IS1A 4C3JC 4C3IC 3FHZA 3T00A 2NVXK 4A3FK 1FEUA 1Y1WK 4BBRK 2V6UA 4GFQA 5M5YK 2L3UA 4IOAS 3GTPK 3GTPA 1K83A 4A3IK 3GTPC 5IORA 4A3GC 3K7AK 3T02A 4A3LK 2JA5K 2KWAA 2CFAB 5IP9K 3HKZL 4GTBA 2A6HA 3GTOK 4ILDA 3CQZA 5DM6S 3CQZC 1TWCC 4LK1A 2VUMA 4BY1C 5C3EK 3S17C 1TWGA 3RZOK 1WCMA 3BP8C 4GZYA 3PO2C 3A8JA 2E2JK 3GTMC 3K7AC 2ZUFA 3GEEA 4KC6A 4A3LC 1O2FB 3GTMA 1F93A 1PJ5A 3AD8C 5IOQA 4A3IC 4QIWD 4GTCA 4O2DA 4FM9A 1I3QA 1XZQA 5IYDK 1BS2A 4G7ZA 3GTJA 4C3IK 3FKIA 3GTJC 4FZBA 4A3FC 2KQ1A 1TWGK 4OIQA 5M3MK 4Q4ZA 1J6VA 4OINA 3G4AA 3H0GA 4ZH4A 1WQHA 3H0GC 1X31C 2ZJPS 4A3CC 3A8KA 4PABA 3DXJA 4U67S 3WODA 4KDDA 5M5XK 3I4NC 4KMUA 5IP9C 3FOEA 4MEXA 5TMFA 4XSXA 1IW7A 1F7VA 1I3QK 1YNJA 4LLGA 3S1NC 2NVYA 1I6HC 2CW0A 2YU9C 4Y52K 4OIRA 4A3DC 2P5MA 3S16C 1WQFA 4MEYA 4BY7C 3CQZK 3HOXK 4BBSK 3S0XA 2Y0SL 4WFNS 2NVTC 1XZPB 3RZDC 5C4XC 3S2HC 4IOCS 1WOOA 2B63C 5TJ3A 4KM9A 3CAGA 4WFBS 3BUEA 3L4KA 2B63A 1TWHK 2R93A 5FLMK 3I4MK 3GTOC 4KN4A 4LK0A 1J98A 4AYBL 1Y1VC 2A68A 4WF9S 1BJTA 4BXXC 3PO3C 1I6HK 1F9NA 1YCLA 3GEHA 3PO2K 1PJ7A 3GTKA 4KAWX 4GTAA 3PIOS 3S14C 3VA7A 2R93K 4YFKA 3S1QC 2JA6C 2B63K 3LAJA 1USOA 2RGRA 2GAHC 3HOWK 5DM7S 1O26A 4KATA 3GTJK 4WJ3M 3GTLA 5IP7K 1EFWA 4GTFA 2V6TA 2E2IA 1VRQC 1VLOA 4IO9S 4C45A 3H3VL 3S1NK 2E2HC 2BE5A 2NVYK 1JQWA 1VGXA 4GT9A 1O25A 4YFNA 3GTQC 3AQOA 2JA8C 1DCOA 2R7ZA 3GTQA 4PAAA 1O28A 1PJ6A 2R7ZC 1TWHC 4C2MC 2FQOA 1AB4A 1WQGA 1SFOK 2Y3PA 4C3JK 3M3YC 2ZFZA 4XLPA 1XZQB 3S1MK 1TWFC 1V5VA 2WB1L 4A3JK
chains in the Genus database with same CATH topology
4C3HK 4QJVA 2YU9K 4ZH4A 5M5WK 4A3JC 2WAQL 4Y7NK 2JA8K 3GTGK 3H0GC 3HOZK 1XPPA 1Y1WC 4QJVB 3S15K 5IYBK 4A3CC 1WCMK 2R92K 3S16K 4A3BK 3GTKC 3RZOC 3DXJA 3GTGC 3WODA 2PMZL 3S1RC 2JA7K 1I50K 5M5XK 3I4NC 2NVTK 2WB1D 4XSZA 1K83C 4KMUA 3S1RK 4JK1A 1R9TK 3GTMK 5IP9C 4X6AK 3H3VD 5C4JK 2A6EA 3HOYC 4MQ9A 1R9TC 4MEXA 5TMFA 4XSXA 3M3YK 5D4DA 1IW7A 3GTLC 1I3QK 1Y1VK 5IYCK 1YNJA 1YNNA 3HKZD 5IYDC 1TWFK 4LLGA 3FKIK 4A93K 3HOVK 3S1NC 2NVQC 1I6HC 4A3DK 4A3EC 2CW0A 2YU9C 4A3KK 2PPBA 4OIRA 1ZYRA 4Y52K 4A3DC 2NVQK 2E2IC 4A3EK 1TWGC 4Y52C 4A3KC 1WCMC 4KN7A 4MEYA 3S16C 4BY7C 3CQZK 3HOXK 2VUMC 3GTQK 4BBSK 2Y0SL 4NOIA 1HQMA 3S17K 2Y0SD 2NVTC 2WB1L 3RZDC 5C4XC 3S2HC 2PA8D 2JA6K 2B63C 2R92C 5C44C 3GTKK 4X6AC 2PA8L 5C4JC 2E2JC 4YFXA 5C44K 5FLMC 3I4MC 3I4NK 3HOUK 5TMCA 1K83K 1I3QC 1TWHK 5IYCC 4A3MC 4A3GK 5FLMK 3I4MK 3GTOC 3HOUC 5IP7C 4KN4A 2WAQD 3FKIC 1SMYA 4LK0A 3HOYK 4OIPA 4AYBL 1SFOC 1Y1VC 2A68A 4C3JC 4C3IC 4BXXC 1TWCK 2NVXK 3M4OC 3PO3C 4BY1K 3S1MC 4A3FK 1I6HK 4BBSC 2VUMK 1Y1WK 1TWAC 4BBRK 3S15C 3M4OK 2O5IA 3PO2K 2E2IK 3S2HK 5C3EC 5M5YK 5M3FK 3GTPK 3S1QK 5IYBC 4A3BC 3S14C 4A3IK 2R93K 4C2MK 4G7OA 3GTPC 4YFKA 3S1QC 2JA6C 4A3GC 3HOWC 4A3MK 2B63K 3K7AK 2R7ZK 4A3LK 2JA5K 3HOWK 5IP9K 3HKZL 3GTJK 2A6HA 3HOVC 3GTOK 3GTLK 5IP7K 4YG2A 2O5JA 4OIOA 1I6VA 4BBRC 3EQLA 2NVYC 1TWAK 3H3VL 3CQZC 3S1NK 4Y7NC 2E2HC 3HOZC 1TWCC 3H0GK 4BXXK 2BE5A 4LK1A 2NVXC 2NVYK 4BY1C 4QIWL 5C3EK 3S17C 3PO3K 4C3HC 3RZOK 4LJZA 2JA7C 4Q5SA 3RZDK 4GZYA 4YFNA 3HOXC 3GTQC 3PO2C 2JA8C 4BY7K 2E2JK 2A69A 4A3CK 3GTMC 3K7AC 2R7ZC 4A3LC 1TWHC 5C4XK 1I50C 5FJ8K 4A3IC 2R93C 3S14K 4C2MC 4QIWD 3S2DK 1SFOK 3S2DC 4A93C 4AYBD 5IYDK 4G7ZA 2JA5C 4C3JK 4XLNA 3M3YC 4XLPA 4C3IK 3GTJC 2PMZD 4A3FC 3S1MK 2E2HK 4G7HA 1TWGK 1TWFC 4OIQA 5M3MK 4Q4ZA 4OINA 1BDFA 4A3JK
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4C3H K;  4QJV A;  2YU9 K;  4ZH4 A;  5M5W K;  4A3J C;  2WAQ L;  4Y7N K;  2JA8 K;  3GTG K;  3H0G C;  3HOZ K;  1XPP A;  1Y1W C;  4QJV B;  3S15 K;  5IYB K;  4A3C C;  1WCM K;  2R92 K;  3S16 K;  4A3B K;  3GTK C;  3RZO C;  3DXJ A;  3GTG C;  3WOD A;  2PMZ L;  3S1R C;  2JA7 K;  1I50 K;  5M5X K;  3I4N C;  2NVT K;  2WB1 D;  4XSZ A;  1K83 C;  4KMU A;  3S1R K;  4JK1 A;  1R9T K;  3GTM K;  5IP9 C;  4X6A K;  3H3V D;  5C4J K;  2A6E A;  3HOY C;  4MQ9 A;  1R9T C;  4MEX A;  5TMF A;  4XSX A;  3M3Y K;  5D4D A;  1IW7 A;  3GTL C;  1I3Q K;  1Y1V K;  5IYC K;  1YNJ A;  1YNN A;  3HKZ D;  5IYD C;  1TWF K;  4LLG A;  3FKI K;  4A93 K;  3HOV K;  3S1N C;  2NVQ C;  1I6H C;  4A3D K;  4A3E C;  2CW0 A;  2YU9 C;  4A3K K;  2PPB A;  4OIR A;  1ZYR A;  4Y52 K;  4A3D C;  2NVQ K;  2E2I C;  4A3E K;  1TWG C;  4Y52 C;  4A3K C;  1WCM C;  4KN7 A;  4MEY A;  3S16 C;  4BY7 C;  3CQZ K;  3HOX K;  2VUM C;  3GTQ K;  4BBS K;  2Y0S L;  4NOI A;  1HQM A;  3S17 K;  2Y0S D;  2NVT C;  2WB1 L;  3RZD C;  5C4X C;  3S2H C;  2PA8 D;  2JA6 K;  2B63 C;  2R92 C;  5C44 C;  3GTK K;  4X6A C;  2PA8 L;  5C4J C;  2E2J C;  4YFX A;  5C44 K;  5FLM C;  3I4M C;  3I4N K;  3HOU K;  5TMC A;  1K83 K;  1I3Q C;  1TWH K;  5IYC C;  4A3M C;  4A3G K;  5FLM K;  3I4M K;  3GTO C;  3HOU C;  5IP7 C;  4KN4 A;  2WAQ D;  3FKI C;  1SMY A;  4LK0 A;  3HOY K;  4OIP A;  4AYB L;  1SFO C;  1Y1V C;  2A68 A;  4C3J C;  4C3I C;  4BXX C;  1TWC K;  2NVX K;  3M4O C;  3PO3 C;  4BY1 K;  3S1M C;  4A3F K;  1I6H K;  4BBS C;  2VUM K;  1Y1W K;  1TWA C;  4BBR K;  3S15 C;  3M4O K;  2O5I A;  3PO2 K;  2E2I K;  3S2H K;  5C3E C;  5M5Y K;  5M3F K;  3GTP K;  3S1Q K;  5IYB C;  4A3B C;  3S14 C;  4A3I K;  2R93 K;  4C2M K;  4G7O A;  3GTP C;  4YFK A;  3S1Q C;  2JA6 C;  4A3G C;  3HOW C;  4A3M K;  2B63 K;  3K7A K;  2R7Z K;  4A3L K;  2JA5 K;  3HOW K;  5IP9 K;  3HKZ L;  3GTJ K;  2A6H A;  3HOV C;  3GTO K;  3GTL K;  5IP7 K;  4YG2 A;  2O5J A;  4OIO A;  1I6V A;  4BBR C;  3EQL A;  2NVY C;  1TWA K;  3H3V L;  3CQZ C;  3S1N K;  4Y7N C;  2E2H C;  3HOZ C;  1TWC C;  3H0G K;  4BXX K;  2BE5 A;  4LK1 A;  2NVX C;  2NVY K;  4BY1 C;  4QIW L;  5C3E K;  3S17 C;  3PO3 K;  4C3H C;  3RZO K;  4LJZ A;  2JA7 C;  4Q5S A;  3RZD K;  4GZY A;  4YFN A;  3HOX C;  3GTQ C;  3PO2 C;  2JA8 C;  4BY7 K;  2E2J K;  2A69 A;  4A3C K;  3GTM C;  3K7A C;  2R7Z C;  4A3L C;  1TWH C;  5C4X K;  1I50 C;  5FJ8 K;  4A3I C;  2R93 C;  3S14 K;  4C2M C;  4QIW D;  3S2D K;  1SFO K;  3S2D C;  4A93 C;  4AYB D;  5IYD K;  4G7Z A;  2JA5 C;  4C3J K;  4XLN A;  3M3Y C;  4XLP A;  4C3I K;  3GTJ C;  2PMZ D;  4A3F C;  3S1M K;  2E2H K;  4G7H A;  1TWG K;  1TWF C;  4OIQ A;  5M3M K;  4Q4Z A;  4OIN A;  1BDF A;  4A3J K; 
#chains in the Genus database with same CATH topology
 1TWF A;  4KMA A;  5M5W K;  4Y7N K;  3TFI A;  3HOZ K;  5HQH A;  1UV7 A;  3AD7 C;  3S16 K;  1XXB A;  3S1R C;  5JVG S;  1VJE A;  1K83 C;  5JVH S;  3S1R K;  4JK1 A;  1R9T K;  3GTM K;  1R9T A;  4X6A K;  3JST A;  3GEI A;  5C4J K;  3HOY C;  1R9T C;  5JFE A;  1Y1V K;  4BLA A;  4A93 K;  1TWF K;  2NVQ C;  4A3E C;  1WIH A;  4A3E K;  2GSU A;  1TWC A;  4KB2 A;  2VUM C;  4G0U A;  2R92 A;  5E68 A;  2JA6 K;  2R92 C;  1G51 A;  5C44 C;  3GTK K;  4X6A C;  3CF5 S;  5JVO A;  1VH2 A;  3A8I A;  3HOU K;  1DCH A;  1ZVU A;  4A3G K;  1IBA A;  1F7U A;  1O29 A;  3HOU C;  3HOY K;  2WAQ D;  1IQ0 A;  1JOE A;  4KB4 A;  1BGW A;  1C0A A;  4DDQ A;  3ORE A;  3NUH A;  3SZY A;  2VUM K;  4J3N A;  2O5I A;  2E2I K;  4GTD A;  4KM8 A;  5C3E C;  3FOF A;  3S1Q K;  4C2M K;  1USM A;  3HOW C;  1B4A A;  1XXA A;  1WOR A;  2W7V A;  2V6S A;  3QX3 A;  3N3Y A;  4YG2 A;  4BBR C;  2NVY C;  3IPJ A;  2YU9 A;  3HOZ C;  4BXX K;  2NVX C;  4QIW L;  3PO3 K;  4C3H C;  2L5N A;  4LJZ A;  4Q5S A;  1ZQ1 C;  4P5A A;  3HXA A;  2A69 A;  4A3C K;  3Q3Q A;  5C4X K;  5FJ8 K;  2JH3 A;  3S2D K;  3SZZ A;  3S2D C;  2XCQ A;  4A93 C;  1O2A A;  2JA5 C;  4XLN A;  2PMZ D;  1Y1V A;  4C3H K;  4QJV A;  2YU9 K;  4BKW A;  4BLB A;  2JA8 K;  3GTG K;  1XPP A;  3GTG A;  4KAR A;  1RU0 A;  4XCH A;  5IYB K;  4A3B K;  3GTK C;  3GTG C;  1O24 A;  1B4B A;  2WB1 D;  4XSZ A;  2XCO A;  5IOS A;  1JVI A;  3H3V D;  1J6W A;  2A6E A;  3DLL S;  2GSN A;  2JA6 A;  3M3Y K;  5D4D A;  3TFJ A;  1J6X A;  3N0C A;  5IYC K;  5CHP A;  3HKZ D;  2KXY A;  1YX2 A;  3L4J A;  3LYW A;  1WSV A;  5L46 A;  4RMF A;  1ZYR A;  5HL8 A;  2NVQ K;  4GTL A;  2E2I C;  1TWG C;  4AH6 A;  4Y52 C;  4KMD A;  1WCM C;  4G0V A;  1O2B A;  3GTQ K;  1HQM A;  1L0W A;  2Y0S D;  5EGH A;  4KMH A;  2PA8 L;  3TFH A;  5C4J C;  2E2J C;  3N0B A;  4YFX A;  1TWH A;  5TMC A;  1K83 K;  1I3Q C;  3OEP A;  4A3M C;  3TTG A;  2XCR B;  1IE0 A;  5IP7 C;  3FKI C;  3PIP S;  3AH5 A;  2CFA A;  2RH6 A;  3T01 A;  1TWC K;  2PHC B;  3M4O C;  4BY1 K;  3S1M C;  3GSI A;  4BBS C;  1TWA C;  3S15 C;  3M4O K;  2D6F C;  2GAG C;  1DCP A;  1TWA A;  2GSO A;  3S2H K;  5M3F K;  1WOS A;  2EBB A;  3ERE D;  1EQR A;  5IYB C;  4A3B C;  4G7O A;  1IL2 A;  4A3M K;  2R7Z K;  1INN A;  3HOV C;  3ADA C;  1WSR A;  3GTL K;  2ZJQ S;  2O5J A;  4G0W A;  4OIO A;  2ZUE A;  2P8T A;  1I6V A;  4GTE A;  3EQL A;  1TWA K;  4Y7N C;  1KQ4 A;  1WOP A;  3H0G K;  4KAS A;  1DD5 A;  2JA7 C;  3RZD K;  1EH1 A;  4LOW A;  4LQY A;  3HOX C;  4BY7 K;  2JA7 A;  3G4C A;  1GE9 A;  1I50 C;  2R93 C;  3S14 K;  1I50 A;  2FQT A;  3GTO A;  3AQP A;  4P9S A;  5CJ9 A;  4AYB D;  2KPU A;  2E2H K;  4G7H A;  3BP3 A;  1BDF A;  3MML B;  3OPF A;  4A3J C;  2WAQ L;  4WCE S;  5EGE A;  3V4G A;  3GIR A;  1Y1W C;  4M1X A;  4QJV B;  3LAP A;  3S15 K;  1WCM K;  2R92 K;  3RZO C;  1Y1W A;  2JA7 K;  1ISE A;  2PMZ L;  1I50 K;  2NVT K;  5IOT A;  4MQ9 A;  1EI6 A;  1EK8 A;  4P5B A;  5HL7 S;  3GTL C;  4LR2 A;  1ZXO A;  1YNN A;  5IYD C;  2ZJR S;  3FKI K;  4WFA S;  3HOV K;  3AD9 C;  1O27 A;  4A3D K;  2E2H A;  4A3K K;  2PPB A;  4WIL A;  4A3K C;  3GDZ A;  4KN7 A;  2NVX A;  4NOI A;  3S17 K;  3LPX A;  4WJ4 A;  2PA8 D;  3I4N K;  1XZP A;  5FLM C;  3I4M C;  5C44 K;  1ZBS A;  5IYC C;  1XXC A;  1SMY A;  4OIP A;  1SFO C;  1HI9 A;  2JA5 A;  1SFO A;  1IS1 A;  4C3J C;  4C3I C;  3FHZ A;  3T00 A;  2NVX K;  4A3F K;  1FEU A;  1Y1W K;  4BBR K;  2V6U A;  4GFQ A;  5M5Y K;  2L3U A;  4IOA S;  3GTP K;  3GTP A;  1K83 A;  4A3I K;  3GTP C;  5IOR A;  4A3G C;  3K7A K;  3T02 A;  4A3L K;  2JA5 K;  2KWA A;  2CFA B;  5IP9 K;  3HKZ L;  4GTB A;  2A6H A;  3GTO K;  4ILD A;  3CQZ A;  5DM6 S;  3CQZ C;  1TWC C;  4LK1 A;  2VUM A;  4BY1 C;  5C3E K;  3S17 C;  1TWG A;  3RZO K;  1WCM A;  3BP8 C;  4GZY A;  3PO2 C;  3A8J A;  2E2J K;  3GTM C;  3K7A C;  2ZUF A;  3GEE A;  4KC6 A;  4A3L C;  1O2F B;  3GTM A;  1F93 A;  1PJ5 A;  3AD8 C;  5IOQ A;  4A3I C;  4QIW D;  4GTC A;  4O2D A;  4FM9 A;  1I3Q A;  1XZQ A;  5IYD K;  1BS2 A;  4G7Z A;  3GTJ A;  4C3I K;  3FKI A;  3GTJ C;  4FZB A;  4A3F C;  2KQ1 A;  1TWG K;  4OIQ A;  5M3M K;  4Q4Z A;  1J6V A;  4OIN A;  3G4A A;  3H0G A;  4ZH4 A;  1WQH A;  3H0G C;  1X31 C;  2ZJP S;  4A3C C;  3A8K A;  4PAB A;  3DXJ A;  4U67 S;  3WOD A;  4KDD A;  5M5X K;  3I4N C;  4KMU A;  5IP9 C;  3FOE A;  4MEX A;  5TMF A;  4XSX A;  1IW7 A;  1F7V A;  1I3Q K;  1YNJ A;  4LLG A;  3S1N C;  2NVY A;  1I6H C;  2CW0 A;  2YU9 C;  4Y52 K;  4OIR A;  4A3D C;  2P5M A;  3S16 C;  1WQF A;  4MEY A;  4BY7 C;  3CQZ K;  3HOX K;  4BBS K;  3S0X A;  2Y0S L;  4WFN S;  2NVT C;  1XZP B;  3RZD C;  5C4X C;  3S2H C;  4IOC S;  1WOO A;  2B63 C;  5TJ3 A;  4KM9 A;  3CAG A;  4WFB S;  3BUE A;  3L4K A;  2B63 A;  1TWH K;  2R93 A;  5FLM K;  3I4M K;  3GTO C;  4KN4 A;  4LK0 A;  1J98 A;  4AYB L;  1Y1V C;  2A68 A;  4WF9 S;  1BJT A;  4BXX C;  3PO3 C;  1I6H K;  1F9N A;  1YCL A;  3GEH A;  3PO2 K;  1PJ7 A;  3GTK A;  4KAW X;  4GTA A;  3PIO S;  3S14 C;  3VA7 A;  2R93 K;  4YFK A;  3S1Q C;  2JA6 C;  2B63 K;  3LAJ A;  1USO A;  2RGR A;  2GAH C;  3HOW K;  5DM7 S;  1O26 A;  4KAT A;  3GTJ K;  4WJ3 M;  3GTL A;  5IP7 K;  1EFW A;  4GTF A;  2V6T A;  2E2I A;  1VRQ C;  1VLO A;  4IO9 S;  4C45 A;  3H3V L;  3S1N K;  2E2H C;  2BE5 A;  2NVY K;  1JQW A;  1VGX A;  4GT9 A;  1O25 A;  4YFN A;  3GTQ C;  3AQO A;  2JA8 C;  1DCO A;  2R7Z A;  3GTQ A;  4PAA A;  1O28 A;  1PJ6 A;  2R7Z C;  1TWH C;  4C2M C;  2FQO A;  1AB4 A;  1WQG A;  1SFO K;  2Y3P A;  4C3J K;  3M3Y C;  2ZFZ A;  4XLP A;  1XZQ B;  3S1M K;  1TWF C;  1V5V A;  2WB1 L;  4A3J K; 
#chains in the Genus database with same CATH homology
 4C3H K;  4QJV A;  2YU9 K;  4ZH4 A;  5M5W K;  4A3J C;  2WAQ L;  4Y7N K;  2JA8 K;  3GTG K;  3H0G C;  3HOZ K;  1XPP A;  1Y1W C;  4QJV B;  3S15 K;  5IYB K;  4A3C C;  1WCM K;  2R92 K;  3S16 K;  4A3B K;  3GTK C;  3RZO C;  3DXJ A;  3GTG C;  3WOD A;  2PMZ L;  3S1R C;  2JA7 K;  1I50 K;  5M5X K;  3I4N C;  2NVT K;  2WB1 D;  4XSZ A;  1K83 C;  4KMU A;  3S1R K;  4JK1 A;  1R9T K;  3GTM K;  5IP9 C;  4X6A K;  3H3V D;  5C4J K;  2A6E A;  3HOY C;  4MQ9 A;  1R9T C;  4MEX A;  5TMF A;  4XSX A;  3M3Y K;  5D4D A;  1IW7 A;  3GTL C;  1I3Q K;  1Y1V K;  5IYC K;  1YNJ A;  1YNN A;  3HKZ D;  5IYD C;  1TWF K;  4LLG A;  3FKI K;  4A93 K;  3HOV K;  3S1N C;  2NVQ C;  1I6H C;  4A3D K;  4A3E C;  2CW0 A;  2YU9 C;  4A3K K;  2PPB A;  4OIR A;  1ZYR A;  4Y52 K;  4A3D C;  2NVQ K;  2E2I C;  4A3E K;  1TWG C;  4Y52 C;  4A3K C;  1WCM C;  4KN7 A;  4MEY A;  3S16 C;  4BY7 C;  3CQZ K;  3HOX K;  2VUM C;  3GTQ K;  4BBS K;  2Y0S L;  4NOI A;  1HQM A;  3S17 K;  2Y0S D;  2NVT C;  2WB1 L;  3RZD C;  5C4X C;  3S2H C;  2PA8 D;  2JA6 K;  2B63 C;  2R92 C;  5C44 C;  3GTK K;  4X6A C;  2PA8 L;  5C4J C;  2E2J C;  4YFX A;  5C44 K;  5FLM C;  3I4M C;  3I4N K;  3HOU K;  5TMC A;  1K83 K;  1I3Q C;  1TWH K;  5IYC C;  4A3M C;  4A3G K;  5FLM K;  3I4M K;  3GTO C;  3HOU C;  5IP7 C;  4KN4 A;  2WAQ D;  3FKI C;  1SMY A;  4LK0 A;  3HOY K;  4OIP A;  4AYB L;  1SFO C;  1Y1V C;  2A68 A;  4C3J C;  4C3I C;  4BXX C;  1TWC K;  2NVX K;  3M4O C;  3PO3 C;  4BY1 K;  3S1M C;  4A3F K;  1I6H K;  4BBS C;  2VUM K;  1Y1W K;  1TWA C;  4BBR K;  3S15 C;  3M4O K;  2O5I A;  3PO2 K;  2E2I K;  3S2H K;  5C3E C;  5M5Y K;  5M3F K;  3GTP K;  3S1Q K;  5IYB C;  4A3B C;  3S14 C;  4A3I K;  2R93 K;  4C2M K;  4G7O A;  3GTP C;  4YFK A;  3S1Q C;  2JA6 C;  4A3G C;  3HOW C;  4A3M K;  2B63 K;  3K7A K;  2R7Z K;  4A3L K;  2JA5 K;  3HOW K;  5IP9 K;  3HKZ L;  3GTJ K;  2A6H A;  3HOV C;  3GTO K;  3GTL K;  5IP7 K;  4YG2 A;  2O5J A;  4OIO A;  1I6V A;  4BBR C;  3EQL A;  2NVY C;  1TWA K;  3H3V L;  3CQZ C;  3S1N K;  4Y7N C;  2E2H C;  3HOZ C;  1TWC C;  3H0G K;  4BXX K;  2BE5 A;  4LK1 A;  2NVX C;  2NVY K;  4BY1 C;  4QIW L;  5C3E K;  3S17 C;  3PO3 K;  4C3H C;  3RZO K;  4LJZ A;  2JA7 C;  4Q5S A;  3RZD K;  4GZY A;  4YFN A;  3HOX C;  3GTQ C;  3PO2 C;  2JA8 C;  4BY7 K;  2E2J K;  2A69 A;  4A3C K;  3GTM C;  3K7A C;  2R7Z C;  4A3L C;  1TWH C;  5C4X K;  1I50 C;  5FJ8 K;  4A3I C;  2R93 C;  3S14 K;  4C2M C;  4QIW D;  3S2D K;  1SFO K;  3S2D C;  4A93 C;  4AYB D;  5IYD K;  4G7Z A;  2JA5 C;  4C3J K;  4XLN A;  3M3Y C;  4XLP A;  4C3I K;  3GTJ C;  2PMZ D;  4A3F C;  3S1M K;  2E2H K;  4G7H A;  1TWG K;  1TWF C;  4OIQ A;  5M3M K;  4Q4Z A;  4OIN A;  1BDF A;  4A3J K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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