4A3FC

Rna polymerase ii initial transcribing complex with a 6nt dna-rna hybrid and soaked with ampcpp
Total Genus 63
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
63
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural basis of initial RNA polymerase II transcription.
pubmed doi rcsb
molecule tags Transcription
molecule keywords DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1
total genus 63
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-09-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 4a3fC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 4a3fC01
4A3DK 3I4MC 4A93C 2JA6K 1WCMC 3HOXC 5D4DA 2NVQC 3S1RC 4BXXC 3HOUC 1TWHK 1TWCC 4G7HA 3CQZK 5M3FK 2E2HK 4A3JK 4MEXA 3GTGK 2A68A 4A3LK 5IYDC 4A3BC 4AYBL 4Y52K 1YNJA 4A3FK 4Q4ZA 3K7AK 4BY7C 2NVXC 4OIOA 3S1QK 4KN4A 2JA6C 4OIQA 3GTMK 5FLMK 2YU9K 3GTQK 4YFNA 4C3HC 4A3JC 3FKIC 2WB1L 5C44C 3GTKC 4Y52C 2JA8C 2R93C 3RZDK 3PO2K 4A3BK 3GTLK 3S2DK 5IYDK 1ZYRA 4A3DC 3DXJA 4AYBD 5IP9C 5IP7K 4Y7NC 1SMYA 4ZH4A 3GTJK 2NVQK 4BXXK 4BBRC 3S1NK 2PA8D 3GTMC 3HOWK 3S1MK 1R9TK 4C2MK 2R7ZC 3HOZK 4XSZA 1Y1WC 3M3YC 4LK0A 1Y1VK 2A69A 2E2IC 2E2JK 4A3IK 3GTLC 5TMFA 3M4OC 5IYBK 3S2HK 2WAQD 3H0GK 3HOYK 5IP7C 3GTJC 4YFKA 2BE5A 4XLPA 4A3MC 1SFOC 2JA5C 2Y0SL 3S15C 1TWHC 3HKZL 2PMZD 4OIRA 4OIPA 4A3EK 4C3IC 1I6HC 3PO2C 5C44K 2B63K 3S2DC 2JA8K 4LJZA 3GTPC 2R93K 4A3KC 1Y1VC 4JK1A 4GZYA 4YG2A 4OINA 4A3FC 3HOVC 3K7AC 3H3VL 3I4NK 3I4MK 5IYBC 3S2HC 3M4OK 2R92C 3S17K 4A93K 3S1QC 3EQLA 4LK1A 2NVYK 4A3MK 5IYCC 1TWCK 4LLGA 2NVTK 3PO3C 2R7ZK 4C3HK 3RZOK 2JA7K 4C3IK 4QJVB 2B63C 5FJ8K 3S16K 4X6AC 1BDFA 1I6VA 3RZDC 3GTKK 5C3EC 2NVXK 3HOVK 5TMCA 5IP9K 1I3QC 4KMUA 3S17C 2R92K 4XSXA 4A3CK 1TWFC 4MEYA 3S14C 3S1NC 3HOUK 2NVTC 3FKIK 3CQZC 2E2HC 3GTGC 4A3LC 4MQ9A 2O5JA 3GTPK 5M3MK 4A3KK 4C2MC 5C4XK 4C3JK 4QIWD 4X6AK 1TWGK 2E2JC 2A6HA 2CW0A 4QIWL 2PPBA 1K83K 4Y7NK 3HOYC 5IYCK 1WCMK 3HOXK 1IW7A 1TWAC 1HQMA 4BBSC 1TWFK 3HOWC 5C4JC 3S1MC 3RZOC 3S15K 2Y0SD 3GTOC 4BY1K 1Y1WK 2WAQL 5M5WK 4YFXA 4QJVA 1TWGC 4KN7A 1XPPA 1I3QK 4A3CC 3I4NC 1K83C 4G7OA 2JA5K 2A6EA 2NVYC 5FLMC 4Q5SA 3GTQC 2PA8L 5C4JK 1I6HK 1I50C 4C3JC 2JA7C 5M5XK 3HOZC 2VUMC 3H3VD 4A3GC 3M3YK 5M5YK 5C3EK 2WB1D 2O5IA 1TWAK 4BBSK 4BBRK 2PMZL 4G7ZA 3PO3K 3HKZD 3S1RK 1SFOK 3GTOK 3S14K 4BY1C 1R9TC 2YU9C 1I50K 3S16C 4A3EC 2E2IK 5C4XC 4A3IC 2VUMK 4A3GK 1YNNA 4NOIA 4BY7K 3WODA 4XLNA 3H0GC
chains in the Genus database with same CATH superfamily
3I4MC 3N3YA 4BXXC 1TWHK 1XXCA 2E2HK 4PAAA 5M3FK 4G7HA 4A3LK 1TWGA 2FQTA 5IYDC 4Y52K 1PJ6A 4BY7C 4KATA 2NVXC 4KB4A 1TWAA 4WFNS 1JOEA 4WILA 4GTCA 4OIQA 3PIPS 2YU9K 4RMFA 4A3JC 1J98A 2GAGC 3OREA 5L46A 3PO2K 4A3BK 3GTLK 3BP3A 4A3DC 2NVQK 4BBRC 2NVYA 3HOWK 1USMA 1WCMA 4C2MK 3IPJA 4LK0A 4O2DA 4A3IK 2W7VA 3AQPA 5E68A 4P5BA 3GTOA 2YU9A 1GE9A 4OIRA 4G0UA 4C3IC 2R93K 4A3KC 3A8KA 2JA6A 1F9NA 1FEUA 3HOVC 1TWHA 3K7AC 3I4NK 3M4OK 2R92C 2D6FC 2NVTK 3PO3C 2R7ZK 3RZOK 4QJVB 2B63C 5FJ8K 1V5VA 2R7ZA 3GIRA 3GTKK 3GTMA 1I3QC 4KMUA 4A3CK 3S14C 3CQZC 4A3LC 4KB2A 4C3JK 4QIWD 1TWGK 3AH5A 2CW0A 4IOCS 3AD9C 3HOYC 1XZQA 5HL8A 1VLOA 5M5WK 4YFXA 4IO9S 1IS1A 3T02A 3SZZA 2ZFZA 1IL2A 2ZUFA 3I4NC 4G7OA 2JA5K 2A6EA 5FLMC 5C4JK 1O25A 3FOFA 1I6HK 3HOZC 4A3GC 1EQRA 1R9TA 1EFWA 1DD5A 1Y1VA 2O5IA 5DM7S 2CFAB 4BBRK 3HKZD 3S1RK 3GTOK 2XCRB 2VUMA 1SFOA 3S16C 2VUMK 1YNNA 1B4AA 4BY7K 2Y3PA 3WODA 4XLNA 5D4DA 3GEEA 1DCHA 1XXAA 3HOUC 3T00A 1F7UA 4A3JK 4A3BC 3CF5S 1YNJA 3K7AK 3MMLB 3GTKA 4KN4A 3BUEA 2JA6C 3GTMK 5FLMK 2KQ1A 4YFNA 1J6VA 2WB1L 3GTKC 4P5AA 2JA8C 1WOOA 1WSRA 5IOSA 1ZYRA 2EBBA 4KASA 3A8IA 1SMYA 4BXXK 4G0WA 4KDDA 3AD7C 2GSUA 2P5MA 1RU0A 5TMFA 5IOTA 3M4OC 1ISEA 3HOYK 5IP7C 4XLPA 1SFOC 1G51A 3PO2C 2B63K 3GTPA 1VJEA 5DM6S 1Y1VC 3G4CA 3GEIA 4LR2A 4A93K 4KM9A 3V4GA 2E2HA 3EQLA 1TWCK 2KXYA 1Y1WA 3S16K 3TFJA 4X6AC 1BDFA 3RZDC 1XZPB 3H0GA 3S17C 3LAJA 4MEYA 3TFIA 3CAGA 3FKIK 2E2HC 2O5JA 5M3MK 1KQ4A 2E2JC 1C0AA 4Y7NK 1K83K 3GEHA 5IYCK 3S1MC 5C4JC 1XZQB 3RZOC 2Y0SD 1ZXOA 3G4AA 2WAQL 1Y1WK 1I3QA 1XPPA 1I3QK 1WSVA 4XCHA 2B63A 4G0VA 4Q5SA 2GSOA 4C3JC 4KMHA 2KPUA 3L4KA 5M5XK 3H3VD 4ILDA 3SZYA 5HL7S 1TWAK 4BBSK 4AH6A 1XXBA 2YU9C 1I50K 2PHCB 3T01A 2XCOA 1I6VA 5IORA 4A93C 1J6WA 2JA6K 1WCMC 3HOXC 2V6SA 3GTGK 1JVIA 1WOSA 4BLAA 3FOEA 4WFBS 3N0CA 5JVOA 3GDZA 3FHZA 3GTQK 4C3HC 1WOPA 3FKIC 5C44C 5JFEA 3RZDK 3S2DK 3LYWA 1O2BA 3DXJA 3TTGA 3Q3QA 1WQHA 5CHPA 5IP7K 4Y7NC 4ZH4A 2PA8D 1L0WA 4FZBA 1HI9A 1O26A 4GFQA 4KAWX 4XSZA 1Y1WC 1VGXA 1Y1VK 2E2JK 3GTLC 2L5NA 1UV7A 4KC6A 4U67S 3OPFA 1WQFA 3GTJC 4YFKA 2BE5A 2JA5C 2ZUEA 2R93A 3S15C 4OIPA 1X31C 1I6HC 2JA8K 1O28A 4LJZA 3GTPC 4GZYA 3A8JA 5HQHA 3H3VL 5IYBC 3S2HC 3CQZA 3S17K 4GTAA 3S1QC 1VRQC 2NVYK 4LK1A 4A3MK 1B4BA 4C3HK 1ZQ1C 2JA7K 4C3IK 1WORA 4WCES 1IBAA 3HOVK 3LPXA 5IP9K 4XSXA 4J3NA 1O27A 1DCPA 2NVTC 3HOUK 4A3KK 3JSTA 1PJ5A 3AQOA 4C45A 2A6HA 1VH2A 4GTEA 2GSNA 1O24A 2XCQA 3DLLS 1WCMK 3HOXK 1IW7A 1HQMA 2JH3A 1TWFK 3HOWC 3S15K 2JA7A 3GTOC 1TWFA 4BY1K 4QJVA 5EGHA 4GT9A 3GTQA 1O2AA 1O29A 4FM9A 4A3CC 4GTLA 2RH6A 2NVYC 3GTQC 2PA8L 1BS2A 1F93A 3ERED 3QX3A 2JA7C 3N0BA 1EI6A 2VUMC 5M5YK 2PMZL 4G7ZA 5JVHS 1JQWA 1SFOK 3PO3K 1R9TC 2NVXA 3GSIA 1J6XA 4A3GK 4GTFA 4A3DK 3HXAA 3ADAC 1XZPA 2NVQC 1INNA 3S1RC 3VA7A 3CQZK 1TWCC 4BKWA 4MEXA 2A68A 1WIHA 4AYBL 2KWAA 4KMDA 4A3FK 4Q4ZA 3BP8C 4OIOA 3S1QK 3LAPA 3S0XA 4WJ4A 3PIOS 1ZBSA 4KMAA 2V6UA 2R93C 4Y52C 5IYDK 2JA5A 3GTJA 2V6TA 4M1XA 4AYBD 5IP9C 4P9SA 1WQGA 3GTJK 3S1NK 3GTMC 1TWCA 3S1MK 1K83A 1R9TK 1ZVUA 2P8TA 2R7ZC 3HOZK 3M3YC 2RGRA 2A69A 2E2IC 1O2FB 4WJ3M 5IYBK 3S2HK 5EGEA 2WAQD 3H0GK 1YCLA 1YX2A 2Y0SL 2R92A 4GTBA 4A3MC 1TWHC 4IOAS 3HKZL 2PMZD 3FKIA 4A3EK 2ZJRS 5C44K 3S2DC 4KARA 4JK1A 4YG2A 4OINA 4A3FC 4KM8A 3I4MK 3GTGA 5IYCC 4LLGA 4WF9S 4GTDA 5C3EC 1BJTA 2NVXK 5TMCA 2R92K 3NUHA 1TWFC 3S1NC 3GTGC 4MQ9A 3GTPK 1BGWA 4C2MC 4BLBA 5C4XK 4X6AK 1PJ7A 4LOWA 4LQYA 4QIWL 2PPBA 4DDQA 1EK8A 3TFHA 1TWAC 2ZJPS 4BBSC 5JVGS 5TJ3A 2E2IA 1TWGC 4KN7A 5CJ9A 1K83C 2GAHC 1DCOA 1AB4A 4PABA 1IQ0A 2FQOA 3AD8C 1I50C 3OEPA 3M3YK 5C3EK 1EH1A 2CFAA 2WB1D 2L3UA 3L4JA 2ZJQS 3S14K 4BY1C 1IE0A 4WFAS 4A3EC 1F7VA 2E2IK 5C4XC 1USOA 4A3IC 1I50A 4NOIA 5IOQA 3GTLA 3H0GC
chains in the Genus database with same CATH topology
4A3DK 3I4MC 4A93C 2JA6K 1WCMC 3HOXC 5D4DA 2NVQC 3S1RC 4BXXC 3HOUC 1TWHK 1TWCC 4G7HA 3CQZK 5M3FK 2E2HK 4A3JK 4MEXA 3GTGK 2A68A 4A3LK 5IYDC 4A3BC 4AYBL 4Y52K 1YNJA 4A3FK 4Q4ZA 3K7AK 4BY7C 2NVXC 4OIOA 3S1QK 4KN4A 2JA6C 4OIQA 3GTMK 5FLMK 2YU9K 3GTQK 4YFNA 4C3HC 4A3JC 3FKIC 2WB1L 5C44C 3GTKC 4Y52C 2JA8C 2R93C 3RZDK 3PO2K 4A3BK 3GTLK 3S2DK 5IYDK 1ZYRA 4A3DC 3DXJA 4AYBD 5IP9C 5IP7K 4Y7NC 1SMYA 4ZH4A 3GTJK 2NVQK 4BXXK 4BBRC 3S1NK 2PA8D 3GTMC 3HOWK 3S1MK 1R9TK 4C2MK 2R7ZC 3HOZK 4XSZA 1Y1WC 3M3YC 4LK0A 1Y1VK 2A69A 2E2IC 2E2JK 4A3IK 3GTLC 5TMFA 3M4OC 5IYBK 3S2HK 2WAQD 3H0GK 3HOYK 5IP7C 3GTJC 4YFKA 2BE5A 4XLPA 4A3MC 1SFOC 2JA5C 2Y0SL 3S15C 1TWHC 3HKZL 2PMZD 4OIRA 4OIPA 4A3EK 4C3IC 1I6HC 3PO2C 5C44K 2B63K 3S2DC 2JA8K 4LJZA 3GTPC 2R93K 4A3KC 1Y1VC 4JK1A 4GZYA 4YG2A 4OINA 4A3FC 3HOVC 3K7AC 3H3VL 3I4NK 3I4MK 5IYBC 3S2HC 3M4OK 2R92C 3S17K 4A93K 3S1QC 3EQLA 4LK1A 2NVYK 4A3MK 5IYCC 1TWCK 4LLGA 2NVTK 3PO3C 2R7ZK 4C3HK 3RZOK 2JA7K 4C3IK 4QJVB 2B63C 5FJ8K 3S16K 4X6AC 1BDFA 1I6VA 3RZDC 3GTKK 5C3EC 2NVXK 3HOVK 5TMCA 5IP9K 1I3QC 4KMUA 3S17C 2R92K 4XSXA 4A3CK 1TWFC 4MEYA 3S14C 3S1NC 3HOUK 2NVTC 3FKIK 3CQZC 2E2HC 3GTGC 4A3LC 4MQ9A 2O5JA 3GTPK 5M3MK 4A3KK 4C2MC 5C4XK 4C3JK 4QIWD 4X6AK 1TWGK 2E2JC 2A6HA 2CW0A 4QIWL 2PPBA 1K83K 4Y7NK 3HOYC 5IYCK 1WCMK 3HOXK 1IW7A 1TWAC 1HQMA 4BBSC 1TWFK 3HOWC 5C4JC 3S1MC 3RZOC 3S15K 2Y0SD 3GTOC 4BY1K 1Y1WK 2WAQL 5M5WK 4YFXA 4QJVA 1TWGC 4KN7A 1XPPA 1I3QK 4A3CC 3I4NC 1K83C 4G7OA 2JA5K 2A6EA 2NVYC 5FLMC 4Q5SA 3GTQC 2PA8L 5C4JK 1I6HK 1I50C 4C3JC 2JA7C 5M5XK 3HOZC 2VUMC 3H3VD 4A3GC 3M3YK 5M5YK 5C3EK 2WB1D 2O5IA 1TWAK 4BBSK 4BBRK 2PMZL 4G7ZA 3PO3K 3HKZD 3S1RK 1SFOK 3GTOK 3S14K 4BY1C 1R9TC 2YU9C 1I50K 3S16C 4A3EC 2E2IK 5C4XC 4A3IC 2VUMK 4A3GK 1YNNA 4NOIA 4BY7K 3WODA 4XLNA 3H0GC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4A3D K;  3I4M C;  4A93 C;  2JA6 K;  1WCM C;  3HOX C;  5D4D A;  2NVQ C;  3S1R C;  4BXX C;  3HOU C;  1TWH K;  1TWC C;  4G7H A;  3CQZ K;  5M3F K;  2E2H K;  4A3J K;  4MEX A;  3GTG K;  2A68 A;  4A3L K;  5IYD C;  4A3B C;  4AYB L;  4Y52 K;  1YNJ A;  4A3F K;  4Q4Z A;  3K7A K;  4BY7 C;  2NVX C;  4OIO A;  3S1Q K;  4KN4 A;  2JA6 C;  4OIQ A;  3GTM K;  5FLM K;  2YU9 K;  3GTQ K;  4YFN A;  4C3H C;  4A3J C;  3FKI C;  2WB1 L;  5C44 C;  3GTK C;  4Y52 C;  2JA8 C;  2R93 C;  3RZD K;  3PO2 K;  4A3B K;  3GTL K;  3S2D K;  5IYD K;  1ZYR A;  4A3D C;  3DXJ A;  4AYB D;  5IP9 C;  5IP7 K;  4Y7N C;  1SMY A;  4ZH4 A;  3GTJ K;  2NVQ K;  4BXX K;  4BBR C;  3S1N K;  2PA8 D;  3GTM C;  3HOW K;  3S1M K;  1R9T K;  4C2M K;  2R7Z C;  3HOZ K;  4XSZ A;  1Y1W C;  3M3Y C;  4LK0 A;  1Y1V K;  2A69 A;  2E2I C;  2E2J K;  4A3I K;  3GTL C;  5TMF A;  3M4O C;  5IYB K;  3S2H K;  2WAQ D;  3H0G K;  3HOY K;  5IP7 C;  3GTJ C;  4YFK A;  2BE5 A;  4XLP A;  4A3M C;  1SFO C;  2JA5 C;  2Y0S L;  3S15 C;  1TWH C;  3HKZ L;  2PMZ D;  4OIR A;  4OIP A;  4A3E K;  4C3I C;  1I6H C;  3PO2 C;  5C44 K;  2B63 K;  3S2D C;  2JA8 K;  4LJZ A;  3GTP C;  2R93 K;  4A3K C;  1Y1V C;  4JK1 A;  4GZY A;  4YG2 A;  4OIN A;  4A3F C;  3HOV C;  3K7A C;  3H3V L;  3I4N K;  3I4M K;  5IYB C;  3S2H C;  3M4O K;  2R92 C;  3S17 K;  4A93 K;  3S1Q C;  3EQL A;  4LK1 A;  2NVY K;  4A3M K;  5IYC C;  1TWC K;  4LLG A;  2NVT K;  3PO3 C;  2R7Z K;  4C3H K;  3RZO K;  2JA7 K;  4C3I K;  4QJV B;  2B63 C;  5FJ8 K;  3S16 K;  4X6A C;  1BDF A;  1I6V A;  3RZD C;  3GTK K;  5C3E C;  2NVX K;  3HOV K;  5TMC A;  5IP9 K;  1I3Q C;  4KMU A;  3S17 C;  2R92 K;  4XSX A;  4A3C K;  1TWF C;  4MEY A;  3S14 C;  3S1N C;  3HOU K;  2NVT C;  3FKI K;  3CQZ C;  2E2H C;  3GTG C;  4A3L C;  4MQ9 A;  2O5J A;  3GTP K;  5M3M K;  4A3K K;  4C2M C;  5C4X K;  4C3J K;  4QIW D;  4X6A K;  1TWG K;  2E2J C;  2A6H A;  2CW0 A;  4QIW L;  2PPB A;  1K83 K;  4Y7N K;  3HOY C;  5IYC K;  1WCM K;  3HOX K;  1IW7 A;  1TWA C;  1HQM A;  4BBS C;  1TWF K;  3HOW C;  5C4J C;  3S1M C;  3RZO C;  3S15 K;  2Y0S D;  3GTO C;  4BY1 K;  1Y1W K;  2WAQ L;  5M5W K;  4YFX A;  4QJV A;  1TWG C;  4KN7 A;  1XPP A;  1I3Q K;  4A3C C;  3I4N C;  1K83 C;  4G7O A;  2JA5 K;  2A6E A;  2NVY C;  5FLM C;  4Q5S A;  3GTQ C;  2PA8 L;  5C4J K;  1I6H K;  1I50 C;  4C3J C;  2JA7 C;  5M5X K;  3HOZ C;  2VUM C;  3H3V D;  4A3G C;  3M3Y K;  5M5Y K;  5C3E K;  2WB1 D;  2O5I A;  1TWA K;  4BBS K;  4BBR K;  2PMZ L;  4G7Z A;  3PO3 K;  3HKZ D;  3S1R K;  1SFO K;  3GTO K;  3S14 K;  4BY1 C;  1R9T C;  2YU9 C;  1I50 K;  3S16 C;  4A3E C;  2E2I K;  5C4X C;  4A3I C;  2VUM K;  4A3G K;  1YNN A;  4NOI A;  4BY7 K;  3WOD A;  4XLN A;  3H0G C; 
#chains in the Genus database with same CATH topology
 3I4M C;  3N3Y A;  4BXX C;  1TWH K;  1XXC A;  2E2H K;  4PAA A;  5M3F K;  4G7H A;  4A3L K;  1TWG A;  2FQT A;  5IYD C;  4Y52 K;  1PJ6 A;  4BY7 C;  4KAT A;  2NVX C;  4KB4 A;  1TWA A;  4WFN S;  1JOE A;  4WIL A;  4GTC A;  4OIQ A;  3PIP S;  2YU9 K;  4RMF A;  4A3J C;  1J98 A;  2GAG C;  3ORE A;  5L46 A;  3PO2 K;  4A3B K;  3GTL K;  3BP3 A;  4A3D C;  2NVQ K;  4BBR C;  2NVY A;  3HOW K;  1USM A;  1WCM A;  4C2M K;  3IPJ A;  4LK0 A;  4O2D A;  4A3I K;  2W7V A;  3AQP A;  5E68 A;  4P5B A;  3GTO A;  2YU9 A;  1GE9 A;  4OIR A;  4G0U A;  4C3I C;  2R93 K;  4A3K C;  3A8K A;  2JA6 A;  1F9N A;  1FEU A;  3HOV C;  1TWH A;  3K7A C;  3I4N K;  3M4O K;  2R92 C;  2D6F C;  2NVT K;  3PO3 C;  2R7Z K;  3RZO K;  4QJV B;  2B63 C;  5FJ8 K;  1V5V A;  2R7Z A;  3GIR A;  3GTK K;  3GTM A;  1I3Q C;  4KMU A;  4A3C K;  3S14 C;  3CQZ C;  4A3L C;  4KB2 A;  4C3J K;  4QIW D;  1TWG K;  3AH5 A;  2CW0 A;  4IOC S;  3AD9 C;  3HOY C;  1XZQ A;  5HL8 A;  1VLO A;  5M5W K;  4YFX A;  4IO9 S;  1IS1 A;  3T02 A;  3SZZ A;  2ZFZ A;  1IL2 A;  2ZUF A;  3I4N C;  4G7O A;  2JA5 K;  2A6E A;  5FLM C;  5C4J K;  1O25 A;  3FOF A;  1I6H K;  3HOZ C;  4A3G C;  1EQR A;  1R9T A;  1EFW A;  1DD5 A;  1Y1V A;  2O5I A;  5DM7 S;  2CFA B;  4BBR K;  3HKZ D;  3S1R K;  3GTO K;  2XCR B;  2VUM A;  1SFO A;  3S16 C;  2VUM K;  1YNN A;  1B4A A;  4BY7 K;  2Y3P A;  3WOD A;  4XLN A;  5D4D A;  3GEE A;  1DCH A;  1XXA A;  3HOU C;  3T00 A;  1F7U A;  4A3J K;  4A3B C;  3CF5 S;  1YNJ A;  3K7A K;  3MML B;  3GTK A;  4KN4 A;  3BUE A;  2JA6 C;  3GTM K;  5FLM K;  2KQ1 A;  4YFN A;  1J6V A;  2WB1 L;  3GTK C;  4P5A A;  2JA8 C;  1WOO A;  1WSR A;  5IOS A;  1ZYR A;  2EBB A;  4KAS A;  3A8I A;  1SMY A;  4BXX K;  4G0W A;  4KDD A;  3AD7 C;  2GSU A;  2P5M A;  1RU0 A;  5TMF A;  5IOT A;  3M4O C;  1ISE A;  3HOY K;  5IP7 C;  4XLP A;  1SFO C;  1G51 A;  3PO2 C;  2B63 K;  3GTP A;  1VJE A;  5DM6 S;  1Y1V C;  3G4C A;  3GEI A;  4LR2 A;  4A93 K;  4KM9 A;  3V4G A;  2E2H A;  3EQL A;  1TWC K;  2KXY A;  1Y1W A;  3S16 K;  3TFJ A;  4X6A C;  1BDF A;  3RZD C;  1XZP B;  3H0G A;  3S17 C;  3LAJ A;  4MEY A;  3TFI A;  3CAG A;  3FKI K;  2E2H C;  2O5J A;  5M3M K;  1KQ4 A;  2E2J C;  1C0A A;  4Y7N K;  1K83 K;  3GEH A;  5IYC K;  3S1M C;  5C4J C;  1XZQ B;  3RZO C;  2Y0S D;  1ZXO A;  3G4A A;  2WAQ L;  1Y1W K;  1I3Q A;  1XPP A;  1I3Q K;  1WSV A;  4XCH A;  2B63 A;  4G0V A;  4Q5S A;  2GSO A;  4C3J C;  4KMH A;  2KPU A;  3L4K A;  5M5X K;  3H3V D;  4ILD A;  3SZY A;  5HL7 S;  1TWA K;  4BBS K;  4AH6 A;  1XXB A;  2YU9 C;  1I50 K;  2PHC B;  3T01 A;  2XCO A;  1I6V A;  5IOR A;  4A93 C;  1J6W A;  2JA6 K;  1WCM C;  3HOX C;  2V6S A;  3GTG K;  1JVI A;  1WOS A;  4BLA A;  3FOE A;  4WFB S;  3N0C A;  5JVO A;  3GDZ A;  3FHZ A;  3GTQ K;  4C3H C;  1WOP A;  3FKI C;  5C44 C;  5JFE A;  3RZD K;  3S2D K;  3LYW A;  1O2B A;  3DXJ A;  3TTG A;  3Q3Q A;  1WQH A;  5CHP A;  5IP7 K;  4Y7N C;  4ZH4 A;  2PA8 D;  1L0W A;  4FZB A;  1HI9 A;  1O26 A;  4GFQ A;  4KAW X;  4XSZ A;  1Y1W C;  1VGX A;  1Y1V K;  2E2J K;  3GTL C;  2L5N A;  1UV7 A;  4KC6 A;  4U67 S;  3OPF A;  1WQF A;  3GTJ C;  4YFK A;  2BE5 A;  2JA5 C;  2ZUE A;  2R93 A;  3S15 C;  4OIP A;  1X31 C;  1I6H C;  2JA8 K;  1O28 A;  4LJZ A;  3GTP C;  4GZY A;  3A8J A;  5HQH A;  3H3V L;  5IYB C;  3S2H C;  3CQZ A;  3S17 K;  4GTA A;  3S1Q C;  1VRQ C;  2NVY K;  4LK1 A;  4A3M K;  1B4B A;  4C3H K;  1ZQ1 C;  2JA7 K;  4C3I K;  1WOR A;  4WCE S;  1IBA A;  3HOV K;  3LPX A;  5IP9 K;  4XSX A;  4J3N A;  1O27 A;  1DCP A;  2NVT C;  3HOU K;  4A3K K;  3JST A;  1PJ5 A;  3AQO A;  4C45 A;  2A6H A;  1VH2 A;  4GTE A;  2GSN A;  1O24 A;  2XCQ A;  3DLL S;  1WCM K;  3HOX K;  1IW7 A;  1HQM A;  2JH3 A;  1TWF K;  3HOW C;  3S15 K;  2JA7 A;  3GTO C;  1TWF A;  4BY1 K;  4QJV A;  5EGH A;  4GT9 A;  3GTQ A;  1O2A A;  1O29 A;  4FM9 A;  4A3C C;  4GTL A;  2RH6 A;  2NVY C;  3GTQ C;  2PA8 L;  1BS2 A;  1F93 A;  3ERE D;  3QX3 A;  2JA7 C;  3N0B A;  1EI6 A;  2VUM C;  5M5Y K;  2PMZ L;  4G7Z A;  5JVH S;  1JQW A;  1SFO K;  3PO3 K;  1R9T C;  2NVX A;  3GSI A;  1J6X A;  4A3G K;  4GTF A;  4A3D K;  3HXA A;  3ADA C;  1XZP A;  2NVQ C;  1INN A;  3S1R C;  3VA7 A;  3CQZ K;  1TWC C;  4BKW A;  4MEX A;  2A68 A;  1WIH A;  4AYB L;  2KWA A;  4KMD A;  4A3F K;  4Q4Z A;  3BP8 C;  4OIO A;  3S1Q K;  3LAP A;  3S0X A;  4WJ4 A;  3PIO S;  1ZBS A;  4KMA A;  2V6U A;  2R93 C;  4Y52 C;  5IYD K;  2JA5 A;  3GTJ A;  2V6T A;  4M1X A;  4AYB D;  5IP9 C;  4P9S A;  1WQG A;  3GTJ K;  3S1N K;  3GTM C;  1TWC A;  3S1M K;  1K83 A;  1R9T K;  1ZVU A;  2P8T A;  2R7Z C;  3HOZ K;  3M3Y C;  2RGR A;  2A69 A;  2E2I C;  1O2F B;  4WJ3 M;  5IYB K;  3S2H K;  5EGE A;  2WAQ D;  3H0G K;  1YCL A;  1YX2 A;  2Y0S L;  2R92 A;  4GTB A;  4A3M C;  1TWH C;  4IOA S;  3HKZ L;  2PMZ D;  3FKI A;  4A3E K;  2ZJR S;  5C44 K;  3S2D C;  4KAR A;  4JK1 A;  4YG2 A;  4OIN A;  4A3F C;  4KM8 A;  3I4M K;  3GTG A;  5IYC C;  4LLG A;  4WF9 S;  4GTD A;  5C3E C;  1BJT A;  2NVX K;  5TMC A;  2R92 K;  3NUH A;  1TWF C;  3S1N C;  3GTG C;  4MQ9 A;  3GTP K;  1BGW A;  4C2M C;  4BLB A;  5C4X K;  4X6A K;  1PJ7 A;  4LOW A;  4LQY A;  4QIW L;  2PPB A;  4DDQ A;  1EK8 A;  3TFH A;  1TWA C;  2ZJP S;  4BBS C;  5JVG S;  5TJ3 A;  2E2I A;  1TWG C;  4KN7 A;  5CJ9 A;  1K83 C;  2GAH C;  1DCO A;  1AB4 A;  4PAB A;  1IQ0 A;  2FQO A;  3AD8 C;  1I50 C;  3OEP A;  3M3Y K;  5C3E K;  1EH1 A;  2CFA A;  2WB1 D;  2L3U A;  3L4J A;  2ZJQ S;  3S14 K;  4BY1 C;  1IE0 A;  4WFA S;  4A3E C;  1F7V A;  2E2I K;  5C4X C;  1USO A;  4A3I C;  1I50 A;  4NOI A;  5IOQ A;  3GTL A;  3H0G C; 
#chains in the Genus database with same CATH homology
 4A3D K;  3I4M C;  4A93 C;  2JA6 K;  1WCM C;  3HOX C;  5D4D A;  2NVQ C;  3S1R C;  4BXX C;  3HOU C;  1TWH K;  1TWC C;  4G7H A;  3CQZ K;  5M3F K;  2E2H K;  4A3J K;  4MEX A;  3GTG K;  2A68 A;  4A3L K;  5IYD C;  4A3B C;  4AYB L;  4Y52 K;  1YNJ A;  4A3F K;  4Q4Z A;  3K7A K;  4BY7 C;  2NVX C;  4OIO A;  3S1Q K;  4KN4 A;  2JA6 C;  4OIQ A;  3GTM K;  5FLM K;  2YU9 K;  3GTQ K;  4YFN A;  4C3H C;  4A3J C;  3FKI C;  2WB1 L;  5C44 C;  3GTK C;  4Y52 C;  2JA8 C;  2R93 C;  3RZD K;  3PO2 K;  4A3B K;  3GTL K;  3S2D K;  5IYD K;  1ZYR A;  4A3D C;  3DXJ A;  4AYB D;  5IP9 C;  5IP7 K;  4Y7N C;  1SMY A;  4ZH4 A;  3GTJ K;  2NVQ K;  4BXX K;  4BBR C;  3S1N K;  2PA8 D;  3GTM C;  3HOW K;  3S1M K;  1R9T K;  4C2M K;  2R7Z C;  3HOZ K;  4XSZ A;  1Y1W C;  3M3Y C;  4LK0 A;  1Y1V K;  2A69 A;  2E2I C;  2E2J K;  4A3I K;  3GTL C;  5TMF A;  3M4O C;  5IYB K;  3S2H K;  2WAQ D;  3H0G K;  3HOY K;  5IP7 C;  3GTJ C;  4YFK A;  2BE5 A;  4XLP A;  4A3M C;  1SFO C;  2JA5 C;  2Y0S L;  3S15 C;  1TWH C;  3HKZ L;  2PMZ D;  4OIR A;  4OIP A;  4A3E K;  4C3I C;  1I6H C;  3PO2 C;  5C44 K;  2B63 K;  3S2D C;  2JA8 K;  4LJZ A;  3GTP C;  2R93 K;  4A3K C;  1Y1V C;  4JK1 A;  4GZY A;  4YG2 A;  4OIN A;  4A3F C;  3HOV C;  3K7A C;  3H3V L;  3I4N K;  3I4M K;  5IYB C;  3S2H C;  3M4O K;  2R92 C;  3S17 K;  4A93 K;  3S1Q C;  3EQL A;  4LK1 A;  2NVY K;  4A3M K;  5IYC C;  1TWC K;  4LLG A;  2NVT K;  3PO3 C;  2R7Z K;  4C3H K;  3RZO K;  2JA7 K;  4C3I K;  4QJV B;  2B63 C;  5FJ8 K;  3S16 K;  4X6A C;  1BDF A;  1I6V A;  3RZD C;  3GTK K;  5C3E C;  2NVX K;  3HOV K;  5TMC A;  5IP9 K;  1I3Q C;  4KMU A;  3S17 C;  2R92 K;  4XSX A;  4A3C K;  1TWF C;  4MEY A;  3S14 C;  3S1N C;  3HOU K;  2NVT C;  3FKI K;  3CQZ C;  2E2H C;  3GTG C;  4A3L C;  4MQ9 A;  2O5J A;  3GTP K;  5M3M K;  4A3K K;  4C2M C;  5C4X K;  4C3J K;  4QIW D;  4X6A K;  1TWG K;  2E2J C;  2A6H A;  2CW0 A;  4QIW L;  2PPB A;  1K83 K;  4Y7N K;  3HOY C;  5IYC K;  1WCM K;  3HOX K;  1IW7 A;  1TWA C;  1HQM A;  4BBS C;  1TWF K;  3HOW C;  5C4J C;  3S1M C;  3RZO C;  3S15 K;  2Y0S D;  3GTO C;  4BY1 K;  1Y1W K;  2WAQ L;  5M5W K;  4YFX A;  4QJV A;  1TWG C;  4KN7 A;  1XPP A;  1I3Q K;  4A3C C;  3I4N C;  1K83 C;  4G7O A;  2JA5 K;  2A6E A;  2NVY C;  5FLM C;  4Q5S A;  3GTQ C;  2PA8 L;  5C4J K;  1I6H K;  1I50 C;  4C3J C;  2JA7 C;  5M5X K;  3HOZ C;  2VUM C;  3H3V D;  4A3G C;  3M3Y K;  5M5Y K;  5C3E K;  2WB1 D;  2O5I A;  1TWA K;  4BBS K;  4BBR K;  2PMZ L;  4G7Z A;  3PO3 K;  3HKZ D;  3S1R K;  1SFO K;  3GTO K;  3S14 K;  4BY1 C;  1R9T C;  2YU9 C;  1I50 K;  3S16 C;  4A3E C;  2E2I K;  5C4X C;  4A3I C;  2VUM K;  4A3G K;  1YNN A;  4NOI A;  4BY7 K;  3WOD A;  4XLN A;  3H0G C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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