4A3FC

Rna polymerase ii initial transcribing complex with a 6nt dna-rna hybrid and soaked with ampcpp
Total Genus 63
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
63
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural basis of initial RNA polymerase II transcription.
pubmed doi rcsb
molecule tags Transcription
molecule keywords DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1
total genus 63
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-09-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 4a3fC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 4a3fC01
4YFXA 1YNNA 3PO2C 4A3EK 2NVQC 3I4MC 3S2HK 2WB1L 4Y7NC 3M4OC 2E2IK 3I4NC 4XSXA 3GTOC 3GTKK 4BXXK 4A3GC 4A3DK 2R92C 5IYDK 2JA7C 2O5JA 4QIWD 3S1QC 5M3MK 1R9TK 3GTJC 4C3IC 4A3FC 4OIRA 3RZDK 2BE5A 5C44C 5C4XC 3GTQC 3M4OK 4Q5SA 5IP7K 1I3QK 4BY7C 1TWAK 4BBSK 3S14K 5C4XK 2NVTK 3HKZD 4OINA 4AYBL 1YNJA 2R7ZC 1SFOK 3M3YC 4LK1A 1TWHK 2B63C 1I50C 4BY1C 3PO3C 4A93C 2NVXC 4XLPA 2Y0SL 3GTMK 3HOWC 4YFKA 5IP9C 2JA6C 4A3CK 1WCMC 2CW0A 4Y52K 4C3HC 4C3JC 5IYBC 3GTKC 4BBRK 3WODA 4QJVB 2VUMK 1XPPA 4Y7NK 4G7HA 4C3HK 1I6VA 1WCMK 5IYBK 3S15K 2PMZD 3S2HC 4QIWL 1Y1WK 3HOWK 4A3CC 3I4MK 4A3IC 4MEYA 3HOVK 1I50K 4YG2A 3PO2K 1TWHC 3CQZK 3S1MK 5M3FK 5C4JC 2JA8K 5TMCA 4OIQA 2NVTC 4A3KC 1K83K 4C2MK 3GTPC 4BBSC 4OIOA 3HOUK 2A69A 5C3EK 3H0GK 1K83C 4KN7A 3S2DC 2E2JK 2R93K 5C4JK 5M5XK 4C3IK 4XLNA 1R9TC 3H3VD 4MEXA 2WAQD 4A3IK 1TWGC 4A3DC 4A3LC 3EQLA 4G7ZA 3K7AK 3S15C 4A3GK 1IW7A 3RZOK 3S1QK 2PA8L 4BBRC 4KMUA 2PMZL 2YU9K 3K7AC 3GTGK 2PA8D 5IP9K 2JA6K 1TWGK 4Y52C 5FLMC 4LK0A 4A3EC 3GTMC 4KN4A 2B63K 3PO3K 3S16K 4A3MK 2E2JC 5IYCK 4X6AC 1I3QC 3S1RK 3GTPK 3GTQK 4A3KK 4LLGA 5C44K 1BDFA 2JA8C 3HOXK 1I6HC 4NOIA 1Y1VC 3H3VL 4GZYA 1Y1VK 3CQZC 2WAQL 3GTJK 1I6HK 3HOVC 2PPBA 3HOXC 3S1MC 3GTLC 5IYDC 2R92K 2Y0SD 1Y1WC 2A6EA 3DXJA 3S1RC 4A3JK 4X6AK 3GTOK 2VUMC 5IYCC 1HQMA 3HOZK 4MQ9A 4QJVA 4JK1A 2E2IC 3S1NK 4C3JK 4A3MC 1TWCC 4OIPA 4Q4ZA 1TWFK 2E2HK 2NVXK 2NVQK 4BY1K 1TWFC 2E2HC 5FLMK 4A93K 3M3YK 1SFOC 1TWCK 5D4DA 2YU9C 3GTGC 3HOYK 2R7ZK 3S1NC 3FKIC 3HOZC 2A68A 4YFNA 2NVYK 3S14C 4A3BK 2JA5C 3RZOC 1TWAC 4A3JC 4BY7K 5IP7C 4A3LK 3GTLK 3S17C 3RZDC 5FJ8K 4A3FK 4XSZA 3S17K 1ZYRA 2R93C 3S2DK 4LJZA 3HKZL 3H0GC 4AYBD 5M5WK 4G7OA 5TMFA 2JA7K 4BXXC 5C3EC 2JA5K 2O5IA 4A3BC 4C2MC 2NVYC 4ZH4A 3HOUC 3FKIK 2A6HA 3I4NK 3HOYC 1SMYA 3S16C 5M5YK 2WB1D
chains in the Genus database with same CATH superfamily
1YNNA 1WOPA 2NVXA 3I4MC 1AB4A 1TWCA 2E2IK 3GSIA 4XSXA 3CF5S 1SFOA 4A3DK 2R92C 4C45A 4QIWD 1O2FB 4G0WA 4A3FC 4G0UA 4GFQA 3GTQC 5HL8A 1WORA 5IP7K 2GAGC 1FEUA 4P9SA 3CQZA 3ERED 4KASA 5IORA 4WFNS 3M3YC 4LK1A 1VJEA 2B63C 4Y52K 3HOWC 1WCMC 4ILDA 3GTKC 3OPFA 3WODA 4QJVB 1V5VA 3LYWA 3FHZA 1XPPA 1I6VA 3S2HC 3GDZA 4QIWL 1Y1WK 3HOWK 4A3CC 3I4MK 5C4JC 5TMCA 4OIQA 4C2MK 2EBBA 4P5BA 2KWAA 3V4GA 3H0GK 1ZVUA 4KN7A 2R93K 5C4JK 2L3UA 4XLNA 4MEXA 2WAQD 3AQOA 4GTEA 1TWGC 4A3DC 3EQLA 3K7AK 3VA7A 2PA8L 1GE9A 1XXAA 3GTJA 3GTGK 1EK8A 5IP9K 1TWGK 4Y52C 3TFJA 3GTMC 3AD8C 3GTOA 2E2JC 3PIPS 4BLBA 3FOFA 3GTPK 4LLGA 3G4AA 4GZYA 3G4CA 3CQZC 2WAQL 1F7UA 3HOVC 2JA7A 2R92K 1Y1WC 2B63A 3AH5A 2V6SA 4GTLA 4QJVA 2KPUA 4GT9A 3S1NK 4C3JK 1TWCC 1F9NA 2JA6A 4BY1K 5FLMK 1SFOC 1WIHA 2ZFZA 4LOWA 2R7ZK 2W7VA 3S1NC 1BGWA 3FKIC 4O2DA 2A68A 4GTBA 4KM9A 2JA5C 3RZOC 3BUEA 5IOSA 3LPXA 3S17C 5M5WK 4G7OA 1EH1A 2CFAA 1JQWA 4ZH4A 3FKIK 2KQ1A 4G0VA 3HOYC 1G51A 4YFXA 3PO2C 2E2HA 2NVQC 4U67S 3DLLS 4Y7NC 1EQRA 1EFWA 2NVYA 3GTOC 4KAWX 4A3GC 2JA7C 5M3MK 3S1QC 3GTLA 1R9TK 3GTJC 4IO9S 5C44C 2XCRB 1WQFA 4BBSK 3S14K 2JA5A 5C4XK 1B4BA 2NVTK 5JFEA 4OINA 1BJTA 5JVGS 3PO3C 3IPJA 3LAPA 3GTMK 2NVXC 1O2BA 4A3CK 2JA6C 2E2IA 2V6UA 5DM6S 2VUMK 1VRQC 3M4OK 3GTKA 2GAHC 4C3HK 5IYBK 1WCMK 1PJ7A 4A3IC 4MEYA 1I50K 1YX2A 1TWHC 2JA8K 3HOUK 2ZJPS 4A3KC 1JVIA 3GTGA 1I3QA 3OREA 3GEEA 1UV7A 2E2JK 1DCOA 3N3YA 1Y1VA 4GTFA 3AD7C 3TFHA 4A3GK 3S15C 1IQ0A 3N0CA 1O25A 4GTCA 1K83A 4BBRC 3L4KA 3K7AC 5HQHA 5FLMC 4GTDA 4PABA 1J98A 3S16K 3N0BA 1XZPA 5IYCK 3JSTA 1XXBA 3T02A 3H0GA 3SZZA 4NOIA 1O28A 1I6HK 3HOXC 3GTLC 2Y0SD 1ISEA 3DXJA 1ZBSA 4GTAA 4X6AK 1RU0A 4A3MC 4OIPA 4Q4ZA 1TWFK 2NVXK 3MMLB 2NVQK 4A93K 1TWFC 4KATA 4KMAA 1DD5A 5D4DA 3GTGC 3NUHA 3T01A 3PIOS 1B4AA 4KMHA 4BLAA 1IE0A 4KM8A 1USMA 2RH6A 1C0AA 3S2DK 3HKZL 3H0GC 4AYBD 2R92A 1WOSA 4BXXC 1TWAA 5EGHA 2XCOA 4A3BC 4C2MC 1J6VA 3HOUC 3I4NK 5M5YK 5CHPA 5IOQA 4A3EK 2P8TA 4KDDA 2WB1L 4LQYA 1IS1A 3I4NC 1J6WA 4BXXK 5JVHS 5IOTA 3RZDK 4RMFA 2VUMA 4Q5SA 1WCMA 4BY7C 1Y1WA 5L46A 2GSNA 4LR2A 1XXCA 1I50C 4BY1C 4IOCS 2Y0SL 3S1QK 4XLPA 1WSRA 2CW0A 4C3JC 1BS2A 4BBRK 1WSVA 2Y3PA 4G7HA 5HL7S 2PMZD 1KQ4A 3S1MK 3HOVK 3CQZK 1VH2A 5M3FK 1TWHA 1K83K 3GTPC 4OIOA 4IOAS 2A69A 3ADAC 5C3EK 4WF9S 4C3IK 2FQOA 4A3IK 4A3LC 1IW7A 3RZOK 3S0XA 4KMUA 2PMZL 2YU9K 2JA6K 2RGRA 4LK0A 4A3EC 1X31C 2B63K 1F93A 1I50A 4X6AC 3AD9C 1I3QC 3GIRA 3GTQK 4A3KK 5C44K 1BDFA 2JA8C 1I6HC 1VGXA 1Y1VC 1Y1VK 2PPBA 1O27A 3S1MC 2PHCB 2A6EA 2V6TA 1XZQB 3S1RC 3CAGA 4A3JK 3GTOK 2VUMC 2ZUFA 5IYCC 4JK1A 2E2IC 5CJ9A 3AQPA 1JOEA 1O26A 2GSOA 3M3YK 1TWCK 3HOYK 3GEHA 2NVYK 3HOZC 3T00A 4KMDA 3S14C 4WCES 4BY7K 1J6XA 4A3LK 2KXYA 3RZDC 1IBAA 1ZYRA 2R93C 2JA7K 1XZQA 5TMFA 3FOEA 5C3EC 3BP8C 2R7ZA 2O5IA 2NVYC 1R9TA 1PJ6A 1IL2A 1SMYA 2WB1D 1TWFA 3S2HK 3M4OC 4FM9A 3GTKK 4WFBS 1F7VA 2ZUEA 5IYDK 2O5JA 1YCLA 2XCQA 4J3NA 4C3IC 4OIRA 2D6FC 1O29A 2BE5A 5C4XC 1WQGA 1O2AA 1I3QK 1TWAK 1O24A 2R93A 4XCHA 3HKZD 3TFIA 4AYBL 1YNJA 2R7ZC 1SFOK 1TWHK 2CFAB 4A93C 3QX3A 1INNA 4YFKA 5IP9C 4WJ3M 1ZXOA 4C3HC 5IYBC 1WQHA 1DCHA 4DDQA 5JVOA 2GSUA 4KC6A 4Y7NK 1XZPB 3S15K 2ZJRS 1TWGA 1WOOA 3BP3A 4WILA 4YG2A 3PO2K 2NVTC 3TTGA 1ZQ1C 4BBSC 2ZJQS 4M1XA 2YU9A 3GTPA 5E68A 1K83C 3S2DC 1HI9A 2JH3A 4KARA 4KB2A 4AH6A 5M5XK 1R9TC 3H3VD 5TJ3A 3GTMA 4G7ZA 1DCPA 4WJ4A 3L4JA 2PA8D 1VLOA 4KN4A 3PO3K 4KB4A 4A3MK 3A8KA 3S1RK 3HOXK 1USOA 3H3VL 3GTJK 3Q3QA 5IYDC 4PAAA 3FKIA 1HQMA 1EI6A 4MQ9A 4WFAS 2P5MA 3HOZK 2L5NA 3A8JA 2E2HK 2E2HC 2YU9C 5EGEA 4YFNA 4A3BK 1TWAC 4A3JC 3SZYA 5IP7C 3GEIA 3GTLK 3GTQA 5FJ8K 4A3FK 4XSZA 4FZBA 3S17K 3OEPA 3HXAA 4LJZA 4P5AA 1L0WA 2JA5K 2FQTA 3LAJA 4BKWA 2A6HA 5DM7S 3S16C 3A8IA 1PJ5A
chains in the Genus database with same CATH topology
4YFXA 1YNNA 3PO2C 4A3EK 2NVQC 3I4MC 3S2HK 2WB1L 4Y7NC 3M4OC 2E2IK 3I4NC 4XSXA 3GTOC 3GTKK 4BXXK 4A3GC 4A3DK 2R92C 5IYDK 2JA7C 2O5JA 4QIWD 3S1QC 5M3MK 1R9TK 3GTJC 4C3IC 4A3FC 4OIRA 3RZDK 2BE5A 5C44C 5C4XC 3GTQC 3M4OK 4Q5SA 5IP7K 1I3QK 4BY7C 1TWAK 4BBSK 3S14K 5C4XK 2NVTK 3HKZD 4OINA 4AYBL 1YNJA 2R7ZC 1SFOK 3M3YC 4LK1A 1TWHK 2B63C 1I50C 4BY1C 3PO3C 4A93C 2NVXC 4XLPA 2Y0SL 3GTMK 3HOWC 4YFKA 5IP9C 2JA6C 4A3CK 1WCMC 2CW0A 4Y52K 4C3HC 4C3JC 5IYBC 3GTKC 4BBRK 3WODA 4QJVB 2VUMK 1XPPA 4Y7NK 4G7HA 4C3HK 1I6VA 1WCMK 5IYBK 3S15K 2PMZD 3S2HC 4QIWL 1Y1WK 3HOWK 4A3CC 3I4MK 4A3IC 4MEYA 3HOVK 1I50K 4YG2A 3PO2K 1TWHC 3CQZK 3S1MK 5M3FK 5C4JC 2JA8K 5TMCA 4OIQA 2NVTC 4A3KC 1K83K 4C2MK 3GTPC 4BBSC 4OIOA 3HOUK 2A69A 5C3EK 3H0GK 1K83C 4KN7A 3S2DC 2E2JK 2R93K 5C4JK 5M5XK 4C3IK 4XLNA 1R9TC 3H3VD 4MEXA 2WAQD 4A3IK 1TWGC 4A3DC 4A3LC 3EQLA 4G7ZA 3K7AK 3S15C 4A3GK 1IW7A 3RZOK 3S1QK 2PA8L 4BBRC 4KMUA 2PMZL 2YU9K 3K7AC 3GTGK 2PA8D 5IP9K 2JA6K 1TWGK 4Y52C 5FLMC 4LK0A 4A3EC 3GTMC 4KN4A 2B63K 3PO3K 3S16K 4A3MK 2E2JC 5IYCK 4X6AC 1I3QC 3S1RK 3GTPK 3GTQK 4A3KK 4LLGA 5C44K 1BDFA 2JA8C 3HOXK 1I6HC 4NOIA 1Y1VC 3H3VL 4GZYA 1Y1VK 3CQZC 2WAQL 3GTJK 1I6HK 3HOVC 2PPBA 3HOXC 3S1MC 3GTLC 5IYDC 2R92K 2Y0SD 1Y1WC 2A6EA 3DXJA 3S1RC 4A3JK 4X6AK 3GTOK 2VUMC 5IYCC 1HQMA 3HOZK 4MQ9A 4QJVA 4JK1A 2E2IC 3S1NK 4C3JK 4A3MC 1TWCC 4OIPA 4Q4ZA 1TWFK 2E2HK 2NVXK 2NVQK 4BY1K 1TWFC 2E2HC 5FLMK 4A93K 3M3YK 1SFOC 1TWCK 5D4DA 2YU9C 3GTGC 3HOYK 2R7ZK 3S1NC 3FKIC 3HOZC 2A68A 4YFNA 2NVYK 3S14C 4A3BK 2JA5C 3RZOC 1TWAC 4A3JC 4BY7K 5IP7C 4A3LK 3GTLK 3S17C 3RZDC 5FJ8K 4A3FK 4XSZA 3S17K 1ZYRA 2R93C 3S2DK 4LJZA 3HKZL 3H0GC 4AYBD 5M5WK 4G7OA 5TMFA 2JA7K 4BXXC 5C3EC 2JA5K 2O5IA 4A3BC 4C2MC 2NVYC 4ZH4A 3HOUC 3FKIK 2A6HA 3I4NK 3HOYC 1SMYA 3S16C 5M5YK 2WB1D
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4YFX A;  1YNN A;  3PO2 C;  4A3E K;  2NVQ C;  3I4M C;  3S2H K;  2WB1 L;  4Y7N C;  3M4O C;  2E2I K;  3I4N C;  4XSX A;  3GTO C;  3GTK K;  4BXX K;  4A3G C;  4A3D K;  2R92 C;  5IYD K;  2JA7 C;  2O5J A;  4QIW D;  3S1Q C;  5M3M K;  1R9T K;  3GTJ C;  4C3I C;  4A3F C;  4OIR A;  3RZD K;  2BE5 A;  5C44 C;  5C4X C;  3GTQ C;  3M4O K;  4Q5S A;  5IP7 K;  1I3Q K;  4BY7 C;  1TWA K;  4BBS K;  3S14 K;  5C4X K;  2NVT K;  3HKZ D;  4OIN A;  4AYB L;  1YNJ A;  2R7Z C;  1SFO K;  3M3Y C;  4LK1 A;  1TWH K;  2B63 C;  1I50 C;  4BY1 C;  3PO3 C;  4A93 C;  2NVX C;  4XLP A;  2Y0S L;  3GTM K;  3HOW C;  4YFK A;  5IP9 C;  2JA6 C;  4A3C K;  1WCM C;  2CW0 A;  4Y52 K;  4C3H C;  4C3J C;  5IYB C;  3GTK C;  4BBR K;  3WOD A;  4QJV B;  2VUM K;  1XPP A;  4Y7N K;  4G7H A;  4C3H K;  1I6V A;  1WCM K;  5IYB K;  3S15 K;  2PMZ D;  3S2H C;  4QIW L;  1Y1W K;  3HOW K;  4A3C C;  3I4M K;  4A3I C;  4MEY A;  3HOV K;  1I50 K;  4YG2 A;  3PO2 K;  1TWH C;  3CQZ K;  3S1M K;  5M3F K;  5C4J C;  2JA8 K;  5TMC A;  4OIQ A;  2NVT C;  4A3K C;  1K83 K;  4C2M K;  3GTP C;  4BBS C;  4OIO A;  3HOU K;  2A69 A;  5C3E K;  3H0G K;  1K83 C;  4KN7 A;  3S2D C;  2E2J K;  2R93 K;  5C4J K;  5M5X K;  4C3I K;  4XLN A;  1R9T C;  3H3V D;  4MEX A;  2WAQ D;  4A3I K;  1TWG C;  4A3D C;  4A3L C;  3EQL A;  4G7Z A;  3K7A K;  3S15 C;  4A3G K;  1IW7 A;  3RZO K;  3S1Q K;  2PA8 L;  4BBR C;  4KMU A;  2PMZ L;  2YU9 K;  3K7A C;  3GTG K;  2PA8 D;  5IP9 K;  2JA6 K;  1TWG K;  4Y52 C;  5FLM C;  4LK0 A;  4A3E C;  3GTM C;  4KN4 A;  2B63 K;  3PO3 K;  3S16 K;  4A3M K;  2E2J C;  5IYC K;  4X6A C;  1I3Q C;  3S1R K;  3GTP K;  3GTQ K;  4A3K K;  4LLG A;  5C44 K;  1BDF A;  2JA8 C;  3HOX K;  1I6H C;  4NOI A;  1Y1V C;  3H3V L;  4GZY A;  1Y1V K;  3CQZ C;  2WAQ L;  3GTJ K;  1I6H K;  3HOV C;  2PPB A;  3HOX C;  3S1M C;  3GTL C;  5IYD C;  2R92 K;  2Y0S D;  1Y1W C;  2A6E A;  3DXJ A;  3S1R C;  4A3J K;  4X6A K;  3GTO K;  2VUM C;  5IYC C;  1HQM A;  3HOZ K;  4MQ9 A;  4QJV A;  4JK1 A;  2E2I C;  3S1N K;  4C3J K;  4A3M C;  1TWC C;  4OIP A;  4Q4Z A;  1TWF K;  2E2H K;  2NVX K;  2NVQ K;  4BY1 K;  1TWF C;  2E2H C;  5FLM K;  4A93 K;  3M3Y K;  1SFO C;  1TWC K;  5D4D A;  2YU9 C;  3GTG C;  3HOY K;  2R7Z K;  3S1N C;  3FKI C;  3HOZ C;  2A68 A;  4YFN A;  2NVY K;  3S14 C;  4A3B K;  2JA5 C;  3RZO C;  1TWA C;  4A3J C;  4BY7 K;  5IP7 C;  4A3L K;  3GTL K;  3S17 C;  3RZD C;  5FJ8 K;  4A3F K;  4XSZ A;  3S17 K;  1ZYR A;  2R93 C;  3S2D K;  4LJZ A;  3HKZ L;  3H0G C;  4AYB D;  5M5W K;  4G7O A;  5TMF A;  2JA7 K;  4BXX C;  5C3E C;  2JA5 K;  2O5I A;  4A3B C;  4C2M C;  2NVY C;  4ZH4 A;  3HOU C;  3FKI K;  2A6H A;  3I4N K;  3HOY C;  1SMY A;  3S16 C;  5M5Y K;  2WB1 D; 
#chains in the Genus database with same CATH topology
 1YNN A;  1WOP A;  2NVX A;  3I4M C;  1AB4 A;  1TWC A;  2E2I K;  3GSI A;  4XSX A;  3CF5 S;  1SFO A;  4A3D K;  2R92 C;  4C45 A;  4QIW D;  1O2F B;  4G0W A;  4A3F C;  4G0U A;  4GFQ A;  3GTQ C;  5HL8 A;  1WOR A;  5IP7 K;  2GAG C;  1FEU A;  4P9S A;  3CQZ A;  3ERE D;  4KAS A;  5IOR A;  4WFN S;  3M3Y C;  4LK1 A;  1VJE A;  2B63 C;  4Y52 K;  3HOW C;  1WCM C;  4ILD A;  3GTK C;  3OPF A;  3WOD A;  4QJV B;  1V5V A;  3LYW A;  3FHZ A;  1XPP A;  1I6V A;  3S2H C;  3GDZ A;  4QIW L;  1Y1W K;  3HOW K;  4A3C C;  3I4M K;  5C4J C;  5TMC A;  4OIQ A;  4C2M K;  2EBB A;  4P5B A;  2KWA A;  3V4G A;  3H0G K;  1ZVU A;  4KN7 A;  2R93 K;  5C4J K;  2L3U A;  4XLN A;  4MEX A;  2WAQ D;  3AQO A;  4GTE A;  1TWG C;  4A3D C;  3EQL A;  3K7A K;  3VA7 A;  2PA8 L;  1GE9 A;  1XXA A;  3GTJ A;  3GTG K;  1EK8 A;  5IP9 K;  1TWG K;  4Y52 C;  3TFJ A;  3GTM C;  3AD8 C;  3GTO A;  2E2J C;  3PIP S;  4BLB A;  3FOF A;  3GTP K;  4LLG A;  3G4A A;  4GZY A;  3G4C A;  3CQZ C;  2WAQ L;  1F7U A;  3HOV C;  2JA7 A;  2R92 K;  1Y1W C;  2B63 A;  3AH5 A;  2V6S A;  4GTL A;  4QJV A;  2KPU A;  4GT9 A;  3S1N K;  4C3J K;  1TWC C;  1F9N A;  2JA6 A;  4BY1 K;  5FLM K;  1SFO C;  1WIH A;  2ZFZ A;  4LOW A;  2R7Z K;  2W7V A;  3S1N C;  1BGW A;  3FKI C;  4O2D A;  2A68 A;  4GTB A;  4KM9 A;  2JA5 C;  3RZO C;  3BUE A;  5IOS A;  3LPX A;  3S17 C;  5M5W K;  4G7O A;  1EH1 A;  2CFA A;  1JQW A;  4ZH4 A;  3FKI K;  2KQ1 A;  4G0V A;  3HOY C;  1G51 A;  4YFX A;  3PO2 C;  2E2H A;  2NVQ C;  4U67 S;  3DLL S;  4Y7N C;  1EQR A;  1EFW A;  2NVY A;  3GTO C;  4KAW X;  4A3G C;  2JA7 C;  5M3M K;  3S1Q C;  3GTL A;  1R9T K;  3GTJ C;  4IO9 S;  5C44 C;  2XCR B;  1WQF A;  4BBS K;  3S14 K;  2JA5 A;  5C4X K;  1B4B A;  2NVT K;  5JFE A;  4OIN A;  1BJT A;  5JVG S;  3PO3 C;  3IPJ A;  3LAP A;  3GTM K;  2NVX C;  1O2B A;  4A3C K;  2JA6 C;  2E2I A;  2V6U A;  5DM6 S;  2VUM K;  1VRQ C;  3M4O K;  3GTK A;  2GAH C;  4C3H K;  5IYB K;  1WCM K;  1PJ7 A;  4A3I C;  4MEY A;  1I50 K;  1YX2 A;  1TWH C;  2JA8 K;  3HOU K;  2ZJP S;  4A3K C;  1JVI A;  3GTG A;  1I3Q A;  3ORE A;  3GEE A;  1UV7 A;  2E2J K;  1DCO A;  3N3Y A;  1Y1V A;  4GTF A;  3AD7 C;  3TFH A;  4A3G K;  3S15 C;  1IQ0 A;  3N0C A;  1O25 A;  4GTC A;  1K83 A;  4BBR C;  3L4K A;  3K7A C;  5HQH A;  5FLM C;  4GTD A;  4PAB A;  1J98 A;  3S16 K;  3N0B A;  1XZP A;  5IYC K;  3JST A;  1XXB A;  3T02 A;  3H0G A;  3SZZ A;  4NOI A;  1O28 A;  1I6H K;  3HOX C;  3GTL C;  2Y0S D;  1ISE A;  3DXJ A;  1ZBS A;  4GTA A;  4X6A K;  1RU0 A;  4A3M C;  4OIP A;  4Q4Z A;  1TWF K;  2NVX K;  3MML B;  2NVQ K;  4A93 K;  1TWF C;  4KAT A;  4KMA A;  1DD5 A;  5D4D A;  3GTG C;  3NUH A;  3T01 A;  3PIO S;  1B4A A;  4KMH A;  4BLA A;  1IE0 A;  4KM8 A;  1USM A;  2RH6 A;  1C0A A;  3S2D K;  3HKZ L;  3H0G C;  4AYB D;  2R92 A;  1WOS A;  4BXX C;  1TWA A;  5EGH A;  2XCO A;  4A3B C;  4C2M C;  1J6V A;  3HOU C;  3I4N K;  5M5Y K;  5CHP A;  5IOQ A;  4A3E K;  2P8T A;  4KDD A;  2WB1 L;  4LQY A;  1IS1 A;  3I4N C;  1J6W A;  4BXX K;  5JVH S;  5IOT A;  3RZD K;  4RMF A;  2VUM A;  4Q5S A;  1WCM A;  4BY7 C;  1Y1W A;  5L46 A;  2GSN A;  4LR2 A;  1XXC A;  1I50 C;  4BY1 C;  4IOC S;  2Y0S L;  3S1Q K;  4XLP A;  1WSR A;  2CW0 A;  4C3J C;  1BS2 A;  4BBR K;  1WSV A;  2Y3P A;  4G7H A;  5HL7 S;  2PMZ D;  1KQ4 A;  3S1M K;  3HOV K;  3CQZ K;  1VH2 A;  5M3F K;  1TWH A;  1K83 K;  3GTP C;  4OIO A;  4IOA S;  2A69 A;  3ADA C;  5C3E K;  4WF9 S;  4C3I K;  2FQO A;  4A3I K;  4A3L C;  1IW7 A;  3RZO K;  3S0X A;  4KMU A;  2PMZ L;  2YU9 K;  2JA6 K;  2RGR A;  4LK0 A;  4A3E C;  1X31 C;  2B63 K;  1F93 A;  1I50 A;  4X6A C;  3AD9 C;  1I3Q C;  3GIR A;  3GTQ K;  4A3K K;  5C44 K;  1BDF A;  2JA8 C;  1I6H C;  1VGX A;  1Y1V C;  1Y1V K;  2PPB A;  1O27 A;  3S1M C;  2PHC B;  2A6E A;  2V6T A;  1XZQ B;  3S1R C;  3CAG A;  4A3J K;  3GTO K;  2VUM C;  2ZUF A;  5IYC C;  4JK1 A;  2E2I C;  5CJ9 A;  3AQP A;  1JOE A;  1O26 A;  2GSO A;  3M3Y K;  1TWC K;  3HOY K;  3GEH A;  2NVY K;  3HOZ C;  3T00 A;  4KMD A;  3S14 C;  4WCE S;  4BY7 K;  1J6X A;  4A3L K;  2KXY A;  3RZD C;  1IBA A;  1ZYR A;  2R93 C;  2JA7 K;  1XZQ A;  5TMF A;  3FOE A;  5C3E C;  3BP8 C;  2R7Z A;  2O5I A;  2NVY C;  1R9T A;  1PJ6 A;  1IL2 A;  1SMY A;  2WB1 D;  1TWF A;  3S2H K;  3M4O C;  4FM9 A;  3GTK K;  4WFB S;  1F7V A;  2ZUE A;  5IYD K;  2O5J A;  1YCL A;  2XCQ A;  4J3N A;  4C3I C;  4OIR A;  2D6F C;  1O29 A;  2BE5 A;  5C4X C;  1WQG A;  1O2A A;  1I3Q K;  1TWA K;  1O24 A;  2R93 A;  4XCH A;  3HKZ D;  3TFI A;  4AYB L;  1YNJ A;  2R7Z C;  1SFO K;  1TWH K;  2CFA B;  4A93 C;  3QX3 A;  1INN A;  4YFK A;  5IP9 C;  4WJ3 M;  1ZXO A;  4C3H C;  5IYB C;  1WQH A;  1DCH A;  4DDQ A;  5JVO A;  2GSU A;  4KC6 A;  4Y7N K;  1XZP B;  3S15 K;  2ZJR S;  1TWG A;  1WOO A;  3BP3 A;  4WIL A;  4YG2 A;  3PO2 K;  2NVT C;  3TTG A;  1ZQ1 C;  4BBS C;  2ZJQ S;  4M1X A;  2YU9 A;  3GTP A;  5E68 A;  1K83 C;  3S2D C;  1HI9 A;  2JH3 A;  4KAR A;  4KB2 A;  4AH6 A;  5M5X K;  1R9T C;  3H3V D;  5TJ3 A;  3GTM A;  4G7Z A;  1DCP A;  4WJ4 A;  3L4J A;  2PA8 D;  1VLO A;  4KN4 A;  3PO3 K;  4KB4 A;  4A3M K;  3A8K A;  3S1R K;  3HOX K;  1USO A;  3H3V L;  3GTJ K;  3Q3Q A;  5IYD C;  4PAA A;  3FKI A;  1HQM A;  1EI6 A;  4MQ9 A;  4WFA S;  2P5M A;  3HOZ K;  2L5N A;  3A8J A;  2E2H K;  2E2H C;  2YU9 C;  5EGE A;  4YFN A;  4A3B K;  1TWA C;  4A3J C;  3SZY A;  5IP7 C;  3GEI A;  3GTL K;  3GTQ A;  5FJ8 K;  4A3F K;  4XSZ A;  4FZB A;  3S17 K;  3OEP A;  3HXA A;  4LJZ A;  4P5A A;  1L0W A;  2JA5 K;  2FQT A;  3LAJ A;  4BKW A;  2A6H A;  5DM7 S;  3S16 C;  3A8I A;  1PJ5 A; 
#chains in the Genus database with same CATH homology
 4YFX A;  1YNN A;  3PO2 C;  4A3E K;  2NVQ C;  3I4M C;  3S2H K;  2WB1 L;  4Y7N C;  3M4O C;  2E2I K;  3I4N C;  4XSX A;  3GTO C;  3GTK K;  4BXX K;  4A3G C;  4A3D K;  2R92 C;  5IYD K;  2JA7 C;  2O5J A;  4QIW D;  3S1Q C;  5M3M K;  1R9T K;  3GTJ C;  4C3I C;  4A3F C;  4OIR A;  3RZD K;  2BE5 A;  5C44 C;  5C4X C;  3GTQ C;  3M4O K;  4Q5S A;  5IP7 K;  1I3Q K;  4BY7 C;  1TWA K;  4BBS K;  3S14 K;  5C4X K;  2NVT K;  3HKZ D;  4OIN A;  4AYB L;  1YNJ A;  2R7Z C;  1SFO K;  3M3Y C;  4LK1 A;  1TWH K;  2B63 C;  1I50 C;  4BY1 C;  3PO3 C;  4A93 C;  2NVX C;  4XLP A;  2Y0S L;  3GTM K;  3HOW C;  4YFK A;  5IP9 C;  2JA6 C;  4A3C K;  1WCM C;  2CW0 A;  4Y52 K;  4C3H C;  4C3J C;  5IYB C;  3GTK C;  4BBR K;  3WOD A;  4QJV B;  2VUM K;  1XPP A;  4Y7N K;  4G7H A;  4C3H K;  1I6V A;  1WCM K;  5IYB K;  3S15 K;  2PMZ D;  3S2H C;  4QIW L;  1Y1W K;  3HOW K;  4A3C C;  3I4M K;  4A3I C;  4MEY A;  3HOV K;  1I50 K;  4YG2 A;  3PO2 K;  1TWH C;  3CQZ K;  3S1M K;  5M3F K;  5C4J C;  2JA8 K;  5TMC A;  4OIQ A;  2NVT C;  4A3K C;  1K83 K;  4C2M K;  3GTP C;  4BBS C;  4OIO A;  3HOU K;  2A69 A;  5C3E K;  3H0G K;  1K83 C;  4KN7 A;  3S2D C;  2E2J K;  2R93 K;  5C4J K;  5M5X K;  4C3I K;  4XLN A;  1R9T C;  3H3V D;  4MEX A;  2WAQ D;  4A3I K;  1TWG C;  4A3D C;  4A3L C;  3EQL A;  4G7Z A;  3K7A K;  3S15 C;  4A3G K;  1IW7 A;  3RZO K;  3S1Q K;  2PA8 L;  4BBR C;  4KMU A;  2PMZ L;  2YU9 K;  3K7A C;  3GTG K;  2PA8 D;  5IP9 K;  2JA6 K;  1TWG K;  4Y52 C;  5FLM C;  4LK0 A;  4A3E C;  3GTM C;  4KN4 A;  2B63 K;  3PO3 K;  3S16 K;  4A3M K;  2E2J C;  5IYC K;  4X6A C;  1I3Q C;  3S1R K;  3GTP K;  3GTQ K;  4A3K K;  4LLG A;  5C44 K;  1BDF A;  2JA8 C;  3HOX K;  1I6H C;  4NOI A;  1Y1V C;  3H3V L;  4GZY A;  1Y1V K;  3CQZ C;  2WAQ L;  3GTJ K;  1I6H K;  3HOV C;  2PPB A;  3HOX C;  3S1M C;  3GTL C;  5IYD C;  2R92 K;  2Y0S D;  1Y1W C;  2A6E A;  3DXJ A;  3S1R C;  4A3J K;  4X6A K;  3GTO K;  2VUM C;  5IYC C;  1HQM A;  3HOZ K;  4MQ9 A;  4QJV A;  4JK1 A;  2E2I C;  3S1N K;  4C3J K;  4A3M C;  1TWC C;  4OIP A;  4Q4Z A;  1TWF K;  2E2H K;  2NVX K;  2NVQ K;  4BY1 K;  1TWF C;  2E2H C;  5FLM K;  4A93 K;  3M3Y K;  1SFO C;  1TWC K;  5D4D A;  2YU9 C;  3GTG C;  3HOY K;  2R7Z K;  3S1N C;  3FKI C;  3HOZ C;  2A68 A;  4YFN A;  2NVY K;  3S14 C;  4A3B K;  2JA5 C;  3RZO C;  1TWA C;  4A3J C;  4BY7 K;  5IP7 C;  4A3L K;  3GTL K;  3S17 C;  3RZD C;  5FJ8 K;  4A3F K;  4XSZ A;  3S17 K;  1ZYR A;  2R93 C;  3S2D K;  4LJZ A;  3HKZ L;  3H0G C;  4AYB D;  5M5W K;  4G7O A;  5TMF A;  2JA7 K;  4BXX C;  5C3E C;  2JA5 K;  2O5I A;  4A3B C;  4C2M C;  2NVY C;  4ZH4 A;  3HOU C;  3FKI K;  2A6H A;  3I4N K;  3HOY C;  1SMY A;  3S16 C;  5M5Y K;  2WB1 D; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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