3GTGC

Backtracked rna polymerase ii complex with 12mer rna
Total Genus 49
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
49
sequence length
271
structure length
271
Chain Sequence
SEEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQDKVNF
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transcription, transferase/dna/rna hybrid
molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Structural basis of transcription: backtracked RNA polymerase II at 3.4 angstrom resolution.
pubmed doi rcsb
total genus 49
structure length 271
sequence length 271
ec nomenclature
pdb deposition date 2009-03-27

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3gtgC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3gtgC01
1I50K 2NVYC 3GTKC 3HOVC 2Y0SL 4C3JK 3S1NC 2VUMC 4A3EK 1SFOK 4A3JK 2WAQL 2JA6K 2JA8K 3I4MK 3HOZC 3RZDK 3DXJA 2WB1L 2WB1D 4OINA 3I4NC 1Y1WC 4X6AC 2NVYK 2Y0SD 5M5YK 3H3VL 4OIQA 4G7HA 2VUMK 3HOUC 3GTKK 3GTOK 2WAQD 3S1NK 3HOZK 4C3HK 5M5XK 5C44C 3S1RC 5TMFA 3GTGK 4YFXA 4A3CC 4OIOA 2E2IK 3H3VD 4XLPA 3I4NK 4A93K 4KN7A 4KN4A 4QJVA 1TWHC 2NVXC 2E2JC 1HQMA 4LK1A 3PO3C 4BY7C 3HOUK 3HOXC 4A3KC 3HOYC 3M4OC 2PA8L 3GTQC 2R92C 3GTLC 4A3FC 1Y1VC 3H0GC 4MEYA 1TWCC 3S2HC 1TWHK 1BDFA 5M5WK 3S16K 4BY7K 4A3KK 2PA8D 4KMUA 2CW0A 2R7ZC 3HOYK 2JA5C 4YFKA 1I6VA 3GTQK 2R92K 4A3FK 1Y1VK 3H0GK 3S2HK 2A6HA 3HOWC 2A69A 5FLMC 4A3GC 2A68A 3HOVK 5IP7C 2JA7C 1SMYA 1K83C 3GTPC 5C3EC 3GTMC 4OIRA 3S1QC 4BBSC 1Y1WK 3HOWK 5FLMK 4A3GK 4X6AK 1R9TC 4C2MC 2JA7K 2E2HC 1K83K 3RZOC 5C3EK 4ZH4A 5C44K 4MEXA 3S1RK 2YU9C 4YG2A 2B63C 4JK1A 4G7OA 3S1QK 2O5JA 4A3CK 3S14C 5IYCC 4A3DC 3S17C 2E2JK 2NVXK 3PO3K 1YNJA 5C4JC 1YNNA 3HOXK 1TWGC 2PPBA 3M4OK 3K7AC 3CQZC 4A3MC 2YU9K 2B63K 4Y7NC 4XSXA 2R93C 3S1MC 2BE5A 1TWFC 4Y52C 3GTLK 3S14K 5IYBC 1TWCK 5IYCK 1I3QC 3S17K 4LJZA 1I6HC 3S2DC 5C4JK 1WCMC 5IYDK 1TWGK 2R7ZK 3GTJC 2JA5K 3CQZK 4A3MK 4Y7NK 4LLGA 2R93K 3PO2C 4Y52K 2A6EA 4Q4ZA 4C3JC 5IP9C 3HKZD 2NVQC 3S2DK 1SFOC 4A3JC 4Q5SA 2JA6C 1WCMK 5IP7K 3EQLA 4QIWD 4BY1C 4AYBD 3GTPK 4G7ZA 4A3BC 4BXXC 4A3LC 5M3MK 5D4DA 3PO2K 3GTMK 1IW7A 4A3IC 5IP9K 4BBRC 4BBSK 2NVQK 4QJVB 3GTOC 5FJ8K 1ZYRA 1R9TK 4LK0A 4C2MK 4NOIA 4C3HC 2E2HK 5C4XC 4BY1K 4C3IC 3RZOK 4A3LK 1TWAC 4A3BK 4BXXK 3GTGC 2E2IC 4A93C 4A3IK 2PMZL 4BBRK 5M3FK 3S15C 2NVTC 4A3DK 3HKZL 5C4XK 4C3IK 1TWAK 3K7AK 3FKIC 3M3YC 4QIWL 4MQ9A 5TMCA 2PMZD 4AYBL 3S1MK 5IYDC 1TWFK 3S15K 1XPPA 3S16C 5IYBK 1I50C 2NVTK 2O5IA 1I3QK 4XSZA 3I4MC 1I6HK 4A3EC 3WODA 2JA8C 4YFNA 4XLNA 3RZDC 3GTJK 3FKIK 3M3YK 4GZYA 4OIPA
chains in the Genus database with same CATH superfamily
3GTKC 3GTLA 1SFOK 2JA8K 2D6FC 4KARA 3HOZC 3RZDK 5IOTA 2R7ZA 3CQZA 3I4NC 5E68A 1C0AA 2CFAA 5M5YK 4OIQA 3S1NK 5C44C 5TMFA 1B4BA 2E2IK 4P5BA 3L4JA 2XCQA 4KN4A 3TFJA 4A3KC 1O24A 1R9TA 3A8KA 3SZYA 5JVOA 3GTLC 1TWHK 1F9NA 2RH6A 5M5WK 2R7ZC 1JQWA 5CJ9A 3GTQK 2R92K 1EI6A 1XXCA 3S2HK 2A6HA 3HOWC 2A69A 1SMYA 3GIRA 3GTJA 4BBSC 3LAJA 1R9TC 4C2MC 2JA7K 3L4KA 5C44K 1IQ0A 1F93A 2JA6A 3S1QK 4JK1A 1YCLA 3S14C 1EK8A 4WJ4A 2FQOA 4A3MC 1XXBA 4BLAA 3GTLK 5IYCK 4KMHA 3S2DC 5C4JK 2R7ZK 3GTJC 1DCOA 3CQZK 1XZQA 1IL2A 3TFHA 4WFAS 2A6EA 4Q4ZA 3ERED 5TJ3A 1WSRA 4C3JC 4A3JC 2JA6C 2GSNA 1HI9A 4QIWD 4BY1C 3PO2K 5D4DA 3T00A 3JSTA 1IW7A 4A3IC 4BBSK 4BBRC 3AQOA 1Y1VA 5FJ8K 4LOWA 1R9TK 4LK0A 4C2MK 4C3HC 5C4XC 1BGWA 4A93C 4IOCS 3S15C 3N3YA 1J98A 1O27A 4MQ9A 5TMCA 4J3NA 2V6TA 1XPPA 2JA8C 1TWHA 4YFNA 1J6VA 3RZDC 2Y3PA 3GTJK 4OIPA 3V4GA 4C3JK 1IS1A 2R92A 3S1NC 4KM9A 4A3JK 1TWCA 2JA6K 4KDDA 1G51A 3DXJA 1PJ5A 2JA5A 4OINA 3H3VL 2VUMK 5IOSA 4C3HK 5JFEA 1O25A 3S1RC 1WCMA 2XCRB 2JA7A 4YFXA 3GTPA 3H3VD 4XLPA 4RMFA 2RGRA 4A93K 3HOUK 1TWHC 1F7UA 2E2JC 3HOXC 1O29A 4LR2A 3GTQC 2E2HA 2R92C 4BLBA 1TWCC 3S2HC 1BJTA 1BDFA 1WQFA 3MMLB 1IE0A 3HOYK 2JA5C 3T01A 1I6VA 4WFBS 1JVIA 1TWAA 4WFNS 1Y1VK 2V6UA 3FOEA 2JA7C 2ZUEA 4GTLA 3GTPC 1ZBSA 1WQGA 3S1QC 3BP3A 3FKIA 2L5NA 3LAPA 5FLMK 4GFQA 5EGEA 2E2HC 4ZH4A 3S1RK 1O26A 4GTBA 1WORA 4XCHA 1IBAA 5IYCC 2E2JK 1YNJA 5C4JC 3HOXK 1VJEA 2PPBA 3K7AC 4LQYA 3CQZC 3GTOA 2YU9K 2B63K 1AB4A 2BE5A 5IYBC 1TWCK 3AD8C 3GTGA 4G0WA 3S17K 3GEEA 4KAWX 4WCES 5IOQA 1UV7A 2JA5K 2P8TA 3PO2C 4PABA 2GSOA 3AD7C 3GEHA 3HKZD 1WCMK 3GSIA 3GTPK 3OEPA 5IP9K 2NVQK 2KWAA 3GTOC 4NOIA 2E2HK 3FOFA 4A3LK 4A3BK 2VUMA 3GTGC 3N0CA 3FHZA 1JOEA 2PMZL 1WIHA 2FQTA 1BS2A 1Y1WA 3NUHA 4IOAS 1TWAK 3K7AK 1J6WA 2ZFZA 5JVHS 4QIWL 2PMZD 1VRQC 4KB2A 4O2DA 5IYBK 1YX2A 2NVTK 1J6XA 3OPFA 4XSZA 2NVXA 4XLNA 3DLLS 3FKIK 4GTFA 1USMA 1XZPB 3TTGA 2WB1L 5IYDK 1I50K 2Y0SL 2VUMC 4G0UA 2WB1D 1Y1WC 2NVYK 2Y0SD 4P9SA 3HOUC 3GTOK 1X31C 4FZBA 3TFIA 3GDZA 3GTGK 4A3CC 3BP8C 4OIOA 3ADAC 2ZJQS 2NVXC 3GTMA 3PO3C 3HOYC 3M4OC 1XXAA 1Y1VC 4M1XA 2YU9A 2B63A 4BY7K 4KMUA 2JH3A 4YFKA 1GE9A 4GTDA 5HL7S 4KMAA 4A3FK 3H0GK 2KPUA 5FLMC 2A68A 2ZJRS 1I3QA 3AQPA 3GTMC 4OIRA 1INNA 2CFAB 1Y1WK 4A3GK 2XCOA 4G0VA 2KQ1A 1K83K 5C3EK 1WQHA 4MEXA 2YU9C 4YG2A 2B63C 4G7OA 2O5JA 4AH6A 4A3CK 4BKWA 1WOSA 4KC6A 4A3DC 3S17C 1O28A 2NVXK 3PO3K 3M4OK 2GSUA 1B4AA 3QX3A 1O2FB 1O2BA 3HXAA 4ILDA 3SZZA 1I3QC 4GTAA 1O2AA 1WCMC 3BUEA 1TWGK 4WILA 4Y7NK 2KXYA 4LLGA 2R93K 4Y52K 5IP9C 1USOA 2NVQC 2EBBA 3N0BA 4KMDA 1I50A 4AYBD 4A3BC 4A3LC 5M3MK 2L3UA 3GTMK 2V6SA 1EQRA 4QJVB 1ZYRA 2NVYA 4BXXK 1TWAC 1L0WA 3LYWA 3G4CA 4KB4A 5M3FK 2NVTC 4A3DK 5DM7S 2ZJPS 3HKZL 4C3IK 5IORA 1VLOA 3FKIC 4FM9A 5IYDC 3S16C 1I50C 2O5IA 1I3QK 4DDQA 4WF9S 5JVGS 3Q3QA 1F7VA 1XZQB 3G4AA 3M3YK 4GZYA 2NVYC 3HOVC 3I4MK 4A3EK 2WAQL 3H0GA 1EFWA 3A8JA 1ZXOA 1PJ6A 1ZQ1C 4X6AC 3GTKK 4G7HA 2WAQD 3HOZK 5M5XK 4KATA 3I4NK 1K83A 4KN7A 2W7VA 4QJVA 3AH5A 1HQMA 4LK1A 4BY7C 2PA8L 1ZVUA 4A3FC 3H0GC 4MEYA 2ZUFA 4C45A 3S16K 1WOOA 4A3KK 2PA8D 2CW0A 5CHPA 1TWGA 4A3GC 2R93A 3HOVK 5IP7C 1TWFA 1K83C 5C3EC 1DD5A 1RU0A 3VA7A 1KQ4A 3HOWK 1ISEA 4X6AK 2PHCB 3GEIA 3RZOC 1SFOA 3AD9C 1YNNA 1TWGC 1WSVA 4WJ3M 3LPXA 4Y7NC 4XSXA 2R93C 3S1MC 4KM8A 5HL8A 1TWFC 4Y52C 5L46A 3S14K 2E2IA 4LJZA 1I6HC 4A3MK 3CF5S 1XZPA 3S2DK 1SFOC 4Q5SA 5IP7K 3EQLA 1V5VA 1VH2A 4G7ZA 4BXXC 3GTQA 5HQHA 1PJ7A 4IO9S 5EGHA 1DCHA 2GAHC 4GTEA 3PIPS 4BY1K 4C3IC 3RZOK 1DCPA 3IPJA 3GTKA 2E2IC 2P5MA 1EH1A 4A3IK 5DM6S 4BBRK 4GT9A 4KASA 1VGXA 4GTCA 5C4XK 3PIOS 2GAGC 3M3YC 3S0XA 1FEUA 4AYBL 3OREA 3CAGA 3S1MK 1WOPA 1TWFK 3S15K 3I4MC 1I6HK 4A3EC 3WODA 4P5AA 4PAAA 4U67S 3A8IA 3T02A
chains in the Genus database with same CATH topology
1I50K 2NVYC 3GTKC 3HOVC 2Y0SL 4C3JK 3S1NC 2VUMC 4A3EK 1SFOK 4A3JK 2WAQL 2JA6K 2JA8K 3I4MK 3HOZC 3RZDK 3DXJA 2WB1L 2WB1D 4OINA 3I4NC 1Y1WC 4X6AC 2NVYK 2Y0SD 5M5YK 3H3VL 4OIQA 4G7HA 2VUMK 3HOUC 3GTKK 3GTOK 2WAQD 3S1NK 3HOZK 4C3HK 5M5XK 5C44C 3S1RC 5TMFA 3GTGK 4YFXA 4A3CC 4OIOA 2E2IK 3H3VD 4XLPA 3I4NK 4A93K 4KN7A 4KN4A 4QJVA 1TWHC 2NVXC 2E2JC 1HQMA 4LK1A 3PO3C 4BY7C 3HOUK 3HOXC 4A3KC 3HOYC 3M4OC 2PA8L 3GTQC 2R92C 3GTLC 4A3FC 1Y1VC 3H0GC 4MEYA 1TWCC 3S2HC 1TWHK 1BDFA 5M5WK 3S16K 4BY7K 4A3KK 2PA8D 4KMUA 2CW0A 2R7ZC 3HOYK 2JA5C 4YFKA 1I6VA 3GTQK 2R92K 4A3FK 1Y1VK 3H0GK 3S2HK 2A6HA 3HOWC 2A69A 5FLMC 4A3GC 2A68A 3HOVK 5IP7C 2JA7C 1SMYA 1K83C 3GTPC 5C3EC 3GTMC 4OIRA 3S1QC 4BBSC 1Y1WK 3HOWK 5FLMK 4A3GK 4X6AK 1R9TC 4C2MC 2JA7K 2E2HC 1K83K 3RZOC 5C3EK 4ZH4A 5C44K 4MEXA 3S1RK 2YU9C 4YG2A 2B63C 4JK1A 4G7OA 3S1QK 2O5JA 4A3CK 3S14C 5IYCC 4A3DC 3S17C 2E2JK 2NVXK 3PO3K 1YNJA 5C4JC 1YNNA 3HOXK 1TWGC 2PPBA 3M4OK 3K7AC 3CQZC 4A3MC 2YU9K 2B63K 4Y7NC 4XSXA 2R93C 3S1MC 2BE5A 1TWFC 4Y52C 3GTLK 3S14K 5IYBC 1TWCK 5IYCK 1I3QC 3S17K 4LJZA 1I6HC 3S2DC 5C4JK 1WCMC 5IYDK 1TWGK 2R7ZK 3GTJC 2JA5K 3CQZK 4A3MK 4Y7NK 4LLGA 2R93K 3PO2C 4Y52K 2A6EA 4Q4ZA 4C3JC 5IP9C 3HKZD 2NVQC 3S2DK 1SFOC 4A3JC 4Q5SA 2JA6C 1WCMK 5IP7K 3EQLA 4QIWD 4BY1C 4AYBD 3GTPK 4G7ZA 4A3BC 4BXXC 4A3LC 5M3MK 5D4DA 3PO2K 3GTMK 1IW7A 4A3IC 5IP9K 4BBRC 4BBSK 2NVQK 4QJVB 3GTOC 5FJ8K 1ZYRA 1R9TK 4LK0A 4C2MK 4NOIA 4C3HC 2E2HK 5C4XC 4BY1K 4C3IC 3RZOK 4A3LK 1TWAC 4A3BK 4BXXK 3GTGC 2E2IC 4A93C 4A3IK 2PMZL 4BBRK 5M3FK 3S15C 2NVTC 4A3DK 3HKZL 5C4XK 4C3IK 1TWAK 3K7AK 3FKIC 3M3YC 4QIWL 4MQ9A 5TMCA 2PMZD 4AYBL 3S1MK 5IYDC 1TWFK 3S15K 1XPPA 3S16C 5IYBK 1I50C 2NVTK 2O5IA 1I3QK 4XSZA 3I4MC 1I6HK 4A3EC 3WODA 2JA8C 4YFNA 4XLNA 3RZDC 3GTJK 3FKIK 3M3YK 4GZYA 4OIPA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1I50 K;  2NVY C;  3GTK C;  3HOV C;  2Y0S L;  4C3J K;  3S1N C;  2VUM C;  4A3E K;  1SFO K;  4A3J K;  2WAQ L;  2JA6 K;  2JA8 K;  3I4M K;  3HOZ C;  3RZD K;  3DXJ A;  2WB1 L;  2WB1 D;  4OIN A;  3I4N C;  1Y1W C;  4X6A C;  2NVY K;  2Y0S D;  5M5Y K;  3H3V L;  4OIQ A;  4G7H A;  2VUM K;  3HOU C;  3GTK K;  3GTO K;  2WAQ D;  3S1N K;  3HOZ K;  4C3H K;  5M5X K;  5C44 C;  3S1R C;  5TMF A;  3GTG K;  4YFX A;  4A3C C;  4OIO A;  2E2I K;  3H3V D;  4XLP A;  3I4N K;  4A93 K;  4KN7 A;  4KN4 A;  4QJV A;  1TWH C;  2NVX C;  2E2J C;  1HQM A;  4LK1 A;  3PO3 C;  4BY7 C;  3HOU K;  3HOX C;  4A3K C;  3HOY C;  3M4O C;  2PA8 L;  3GTQ C;  2R92 C;  3GTL C;  4A3F C;  1Y1V C;  3H0G C;  4MEY A;  1TWC C;  3S2H C;  1TWH K;  1BDF A;  5M5W K;  3S16 K;  4BY7 K;  4A3K K;  2PA8 D;  4KMU A;  2CW0 A;  2R7Z C;  3HOY K;  2JA5 C;  4YFK A;  1I6V A;  3GTQ K;  2R92 K;  4A3F K;  1Y1V K;  3H0G K;  3S2H K;  2A6H A;  3HOW C;  2A69 A;  5FLM C;  4A3G C;  2A68 A;  3HOV K;  5IP7 C;  2JA7 C;  1SMY A;  1K83 C;  3GTP C;  5C3E C;  3GTM C;  4OIR A;  3S1Q C;  4BBS C;  1Y1W K;  3HOW K;  5FLM K;  4A3G K;  4X6A K;  1R9T C;  4C2M C;  2JA7 K;  2E2H C;  1K83 K;  3RZO C;  5C3E K;  4ZH4 A;  5C44 K;  4MEX A;  3S1R K;  2YU9 C;  4YG2 A;  2B63 C;  4JK1 A;  4G7O A;  3S1Q K;  2O5J A;  4A3C K;  3S14 C;  5IYC C;  4A3D C;  3S17 C;  2E2J K;  2NVX K;  3PO3 K;  1YNJ A;  5C4J C;  1YNN A;  3HOX K;  1TWG C;  2PPB A;  3M4O K;  3K7A C;  3CQZ C;  4A3M C;  2YU9 K;  2B63 K;  4Y7N C;  4XSX A;  2R93 C;  3S1M C;  2BE5 A;  1TWF C;  4Y52 C;  3GTL K;  3S14 K;  5IYB C;  1TWC K;  5IYC K;  1I3Q C;  3S17 K;  4LJZ A;  1I6H C;  3S2D C;  5C4J K;  1WCM C;  5IYD K;  1TWG K;  2R7Z K;  3GTJ C;  2JA5 K;  3CQZ K;  4A3M K;  4Y7N K;  4LLG A;  2R93 K;  3PO2 C;  4Y52 K;  2A6E A;  4Q4Z A;  4C3J C;  5IP9 C;  3HKZ D;  2NVQ C;  3S2D K;  1SFO C;  4A3J C;  4Q5S A;  2JA6 C;  1WCM K;  5IP7 K;  3EQL A;  4QIW D;  4BY1 C;  4AYB D;  3GTP K;  4G7Z A;  4A3B C;  4BXX C;  4A3L C;  5M3M K;  5D4D A;  3PO2 K;  3GTM K;  1IW7 A;  4A3I C;  5IP9 K;  4BBR C;  4BBS K;  2NVQ K;  4QJV B;  3GTO C;  5FJ8 K;  1ZYR A;  1R9T K;  4LK0 A;  4C2M K;  4NOI A;  4C3H C;  2E2H K;  5C4X C;  4BY1 K;  4C3I C;  3RZO K;  4A3L K;  1TWA C;  4A3B K;  4BXX K;  3GTG C;  2E2I C;  4A93 C;  4A3I K;  2PMZ L;  4BBR K;  5M3F K;  3S15 C;  2NVT C;  4A3D K;  3HKZ L;  5C4X K;  4C3I K;  1TWA K;  3K7A K;  3FKI C;  3M3Y C;  4QIW L;  4MQ9 A;  5TMC A;  2PMZ D;  4AYB L;  3S1M K;  5IYD C;  1TWF K;  3S15 K;  1XPP A;  3S16 C;  5IYB K;  1I50 C;  2NVT K;  2O5I A;  1I3Q K;  4XSZ A;  3I4M C;  1I6H K;  4A3E C;  3WOD A;  2JA8 C;  4YFN A;  4XLN A;  3RZD C;  3GTJ K;  3FKI K;  3M3Y K;  4GZY A;  4OIP A; 
#chains in the Genus database with same CATH topology
 3GTK C;  3GTL A;  1SFO K;  2JA8 K;  2D6F C;  4KAR A;  3HOZ C;  3RZD K;  5IOT A;  2R7Z A;  3CQZ A;  3I4N C;  5E68 A;  1C0A A;  2CFA A;  5M5Y K;  4OIQ A;  3S1N K;  5C44 C;  5TMF A;  1B4B A;  2E2I K;  4P5B A;  3L4J A;  2XCQ A;  4KN4 A;  3TFJ A;  4A3K C;  1O24 A;  1R9T A;  3A8K A;  3SZY A;  5JVO A;  3GTL C;  1TWH K;  1F9N A;  2RH6 A;  5M5W K;  2R7Z C;  1JQW A;  5CJ9 A;  3GTQ K;  2R92 K;  1EI6 A;  1XXC A;  3S2H K;  2A6H A;  3HOW C;  2A69 A;  1SMY A;  3GIR A;  3GTJ A;  4BBS C;  3LAJ A;  1R9T C;  4C2M C;  2JA7 K;  3L4K A;  5C44 K;  1IQ0 A;  1F93 A;  2JA6 A;  3S1Q K;  4JK1 A;  1YCL A;  3S14 C;  1EK8 A;  4WJ4 A;  2FQO A;  4A3M C;  1XXB A;  4BLA A;  3GTL K;  5IYC K;  4KMH A;  3S2D C;  5C4J K;  2R7Z K;  3GTJ C;  1DCO A;  3CQZ K;  1XZQ A;  1IL2 A;  3TFH A;  4WFA S;  2A6E A;  4Q4Z A;  3ERE D;  5TJ3 A;  1WSR A;  4C3J C;  4A3J C;  2JA6 C;  2GSN A;  1HI9 A;  4QIW D;  4BY1 C;  3PO2 K;  5D4D A;  3T00 A;  3JST A;  1IW7 A;  4A3I C;  4BBS K;  4BBR C;  3AQO A;  1Y1V A;  5FJ8 K;  4LOW A;  1R9T K;  4LK0 A;  4C2M K;  4C3H C;  5C4X C;  1BGW A;  4A93 C;  4IOC S;  3S15 C;  3N3Y A;  1J98 A;  1O27 A;  4MQ9 A;  5TMC A;  4J3N A;  2V6T A;  1XPP A;  2JA8 C;  1TWH A;  4YFN A;  1J6V A;  3RZD C;  2Y3P A;  3GTJ K;  4OIP A;  3V4G A;  4C3J K;  1IS1 A;  2R92 A;  3S1N C;  4KM9 A;  4A3J K;  1TWC A;  2JA6 K;  4KDD A;  1G51 A;  3DXJ A;  1PJ5 A;  2JA5 A;  4OIN A;  3H3V L;  2VUM K;  5IOS A;  4C3H K;  5JFE A;  1O25 A;  3S1R C;  1WCM A;  2XCR B;  2JA7 A;  4YFX A;  3GTP A;  3H3V D;  4XLP A;  4RMF A;  2RGR A;  4A93 K;  3HOU K;  1TWH C;  1F7U A;  2E2J C;  3HOX C;  1O29 A;  4LR2 A;  3GTQ C;  2E2H A;  2R92 C;  4BLB A;  1TWC C;  3S2H C;  1BJT A;  1BDF A;  1WQF A;  3MML B;  1IE0 A;  3HOY K;  2JA5 C;  3T01 A;  1I6V A;  4WFB S;  1JVI A;  1TWA A;  4WFN S;  1Y1V K;  2V6U A;  3FOE A;  2JA7 C;  2ZUE A;  4GTL A;  3GTP C;  1ZBS A;  1WQG A;  3S1Q C;  3BP3 A;  3FKI A;  2L5N A;  3LAP A;  5FLM K;  4GFQ A;  5EGE A;  2E2H C;  4ZH4 A;  3S1R K;  1O26 A;  4GTB A;  1WOR A;  4XCH A;  1IBA A;  5IYC C;  2E2J K;  1YNJ A;  5C4J C;  3HOX K;  1VJE A;  2PPB A;  3K7A C;  4LQY A;  3CQZ C;  3GTO A;  2YU9 K;  2B63 K;  1AB4 A;  2BE5 A;  5IYB C;  1TWC K;  3AD8 C;  3GTG A;  4G0W A;  3S17 K;  3GEE A;  4KAW X;  4WCE S;  5IOQ A;  1UV7 A;  2JA5 K;  2P8T A;  3PO2 C;  4PAB A;  2GSO A;  3AD7 C;  3GEH A;  3HKZ D;  1WCM K;  3GSI A;  3GTP K;  3OEP A;  5IP9 K;  2NVQ K;  2KWA A;  3GTO C;  4NOI A;  2E2H K;  3FOF A;  4A3L K;  4A3B K;  2VUM A;  3GTG C;  3N0C A;  3FHZ A;  1JOE A;  2PMZ L;  1WIH A;  2FQT A;  1BS2 A;  1Y1W A;  3NUH A;  4IOA S;  1TWA K;  3K7A K;  1J6W A;  2ZFZ A;  5JVH S;  4QIW L;  2PMZ D;  1VRQ C;  4KB2 A;  4O2D A;  5IYB K;  1YX2 A;  2NVT K;  1J6X A;  3OPF A;  4XSZ A;  2NVX A;  4XLN A;  3DLL S;  3FKI K;  4GTF A;  1USM A;  1XZP B;  3TTG A;  2WB1 L;  5IYD K;  1I50 K;  2Y0S L;  2VUM C;  4G0U A;  2WB1 D;  1Y1W C;  2NVY K;  2Y0S D;  4P9S A;  3HOU C;  3GTO K;  1X31 C;  4FZB A;  3TFI A;  3GDZ A;  3GTG K;  4A3C C;  3BP8 C;  4OIO A;  3ADA C;  2ZJQ S;  2NVX C;  3GTM A;  3PO3 C;  3HOY C;  3M4O C;  1XXA A;  1Y1V C;  4M1X A;  2YU9 A;  2B63 A;  4BY7 K;  4KMU A;  2JH3 A;  4YFK A;  1GE9 A;  4GTD A;  5HL7 S;  4KMA A;  4A3F K;  3H0G K;  2KPU A;  5FLM C;  2A68 A;  2ZJR S;  1I3Q A;  3AQP A;  3GTM C;  4OIR A;  1INN A;  2CFA B;  1Y1W K;  4A3G K;  2XCO A;  4G0V A;  2KQ1 A;  1K83 K;  5C3E K;  1WQH A;  4MEX A;  2YU9 C;  4YG2 A;  2B63 C;  4G7O A;  2O5J A;  4AH6 A;  4A3C K;  4BKW A;  1WOS A;  4KC6 A;  4A3D C;  3S17 C;  1O28 A;  2NVX K;  3PO3 K;  3M4O K;  2GSU A;  1B4A A;  3QX3 A;  1O2F B;  1O2B A;  3HXA A;  4ILD A;  3SZZ A;  1I3Q C;  4GTA A;  1O2A A;  1WCM C;  3BUE A;  1TWG K;  4WIL A;  4Y7N K;  2KXY A;  4LLG A;  2R93 K;  4Y52 K;  5IP9 C;  1USO A;  2NVQ C;  2EBB A;  3N0B A;  4KMD A;  1I50 A;  4AYB D;  4A3B C;  4A3L C;  5M3M K;  2L3U A;  3GTM K;  2V6S A;  1EQR A;  4QJV B;  1ZYR A;  2NVY A;  4BXX K;  1TWA C;  1L0W A;  3LYW A;  3G4C A;  4KB4 A;  5M3F K;  2NVT C;  4A3D K;  5DM7 S;  2ZJP S;  3HKZ L;  4C3I K;  5IOR A;  1VLO A;  3FKI C;  4FM9 A;  5IYD C;  3S16 C;  1I50 C;  2O5I A;  1I3Q K;  4DDQ A;  4WF9 S;  5JVG S;  3Q3Q A;  1F7V A;  1XZQ B;  3G4A A;  3M3Y K;  4GZY A;  2NVY C;  3HOV C;  3I4M K;  4A3E K;  2WAQ L;  3H0G A;  1EFW A;  3A8J A;  1ZXO A;  1PJ6 A;  1ZQ1 C;  4X6A C;  3GTK K;  4G7H A;  2WAQ D;  3HOZ K;  5M5X K;  4KAT A;  3I4N K;  1K83 A;  4KN7 A;  2W7V A;  4QJV A;  3AH5 A;  1HQM A;  4LK1 A;  4BY7 C;  2PA8 L;  1ZVU A;  4A3F C;  3H0G C;  4MEY A;  2ZUF A;  4C45 A;  3S16 K;  1WOO A;  4A3K K;  2PA8 D;  2CW0 A;  5CHP A;  1TWG A;  4A3G C;  2R93 A;  3HOV K;  5IP7 C;  1TWF A;  1K83 C;  5C3E C;  1DD5 A;  1RU0 A;  3VA7 A;  1KQ4 A;  3HOW K;  1ISE A;  4X6A K;  2PHC B;  3GEI A;  3RZO C;  1SFO A;  3AD9 C;  1YNN A;  1TWG C;  1WSV A;  4WJ3 M;  3LPX A;  4Y7N C;  4XSX A;  2R93 C;  3S1M C;  4KM8 A;  5HL8 A;  1TWF C;  4Y52 C;  5L46 A;  3S14 K;  2E2I A;  4LJZ A;  1I6H C;  4A3M K;  3CF5 S;  1XZP A;  3S2D K;  1SFO C;  4Q5S A;  5IP7 K;  3EQL A;  1V5V A;  1VH2 A;  4G7Z A;  4BXX C;  3GTQ A;  5HQH A;  1PJ7 A;  4IO9 S;  5EGH A;  1DCH A;  2GAH C;  4GTE A;  3PIP S;  4BY1 K;  4C3I C;  3RZO K;  1DCP A;  3IPJ A;  3GTK A;  2E2I C;  2P5M A;  1EH1 A;  4A3I K;  5DM6 S;  4BBR K;  4GT9 A;  4KAS A;  1VGX A;  4GTC A;  5C4X K;  3PIO S;  2GAG C;  3M3Y C;  3S0X A;  1FEU A;  4AYB L;  3ORE A;  3CAG A;  3S1M K;  1WOP A;  1TWF K;  3S15 K;  3I4M C;  1I6H K;  4A3E C;  3WOD A;  4P5A A;  4PAA A;  4U67 S;  3A8I A;  3T02 A; 
#chains in the Genus database with same CATH homology
 1I50 K;  2NVY C;  3GTK C;  3HOV C;  2Y0S L;  4C3J K;  3S1N C;  2VUM C;  4A3E K;  1SFO K;  4A3J K;  2WAQ L;  2JA6 K;  2JA8 K;  3I4M K;  3HOZ C;  3RZD K;  3DXJ A;  2WB1 L;  2WB1 D;  4OIN A;  3I4N C;  1Y1W C;  4X6A C;  2NVY K;  2Y0S D;  5M5Y K;  3H3V L;  4OIQ A;  4G7H A;  2VUM K;  3HOU C;  3GTK K;  3GTO K;  2WAQ D;  3S1N K;  3HOZ K;  4C3H K;  5M5X K;  5C44 C;  3S1R C;  5TMF A;  3GTG K;  4YFX A;  4A3C C;  4OIO A;  2E2I K;  3H3V D;  4XLP A;  3I4N K;  4A93 K;  4KN7 A;  4KN4 A;  4QJV A;  1TWH C;  2NVX C;  2E2J C;  1HQM A;  4LK1 A;  3PO3 C;  4BY7 C;  3HOU K;  3HOX C;  4A3K C;  3HOY C;  3M4O C;  2PA8 L;  3GTQ C;  2R92 C;  3GTL C;  4A3F C;  1Y1V C;  3H0G C;  4MEY A;  1TWC C;  3S2H C;  1TWH K;  1BDF A;  5M5W K;  3S16 K;  4BY7 K;  4A3K K;  2PA8 D;  4KMU A;  2CW0 A;  2R7Z C;  3HOY K;  2JA5 C;  4YFK A;  1I6V A;  3GTQ K;  2R92 K;  4A3F K;  1Y1V K;  3H0G K;  3S2H K;  2A6H A;  3HOW C;  2A69 A;  5FLM C;  4A3G C;  2A68 A;  3HOV K;  5IP7 C;  2JA7 C;  1SMY A;  1K83 C;  3GTP C;  5C3E C;  3GTM C;  4OIR A;  3S1Q C;  4BBS C;  1Y1W K;  3HOW K;  5FLM K;  4A3G K;  4X6A K;  1R9T C;  4C2M C;  2JA7 K;  2E2H C;  1K83 K;  3RZO C;  5C3E K;  4ZH4 A;  5C44 K;  4MEX A;  3S1R K;  2YU9 C;  4YG2 A;  2B63 C;  4JK1 A;  4G7O A;  3S1Q K;  2O5J A;  4A3C K;  3S14 C;  5IYC C;  4A3D C;  3S17 C;  2E2J K;  2NVX K;  3PO3 K;  1YNJ A;  5C4J C;  1YNN A;  3HOX K;  1TWG C;  2PPB A;  3M4O K;  3K7A C;  3CQZ C;  4A3M C;  2YU9 K;  2B63 K;  4Y7N C;  4XSX A;  2R93 C;  3S1M C;  2BE5 A;  1TWF C;  4Y52 C;  3GTL K;  3S14 K;  5IYB C;  1TWC K;  5IYC K;  1I3Q C;  3S17 K;  4LJZ A;  1I6H C;  3S2D C;  5C4J K;  1WCM C;  5IYD K;  1TWG K;  2R7Z K;  3GTJ C;  2JA5 K;  3CQZ K;  4A3M K;  4Y7N K;  4LLG A;  2R93 K;  3PO2 C;  4Y52 K;  2A6E A;  4Q4Z A;  4C3J C;  5IP9 C;  3HKZ D;  2NVQ C;  3S2D K;  1SFO C;  4A3J C;  4Q5S A;  2JA6 C;  1WCM K;  5IP7 K;  3EQL A;  4QIW D;  4BY1 C;  4AYB D;  3GTP K;  4G7Z A;  4A3B C;  4BXX C;  4A3L C;  5M3M K;  5D4D A;  3PO2 K;  3GTM K;  1IW7 A;  4A3I C;  5IP9 K;  4BBR C;  4BBS K;  2NVQ K;  4QJV B;  3GTO C;  5FJ8 K;  1ZYR A;  1R9T K;  4LK0 A;  4C2M K;  4NOI A;  4C3H C;  2E2H K;  5C4X C;  4BY1 K;  4C3I C;  3RZO K;  4A3L K;  1TWA C;  4A3B K;  4BXX K;  3GTG C;  2E2I C;  4A93 C;  4A3I K;  2PMZ L;  4BBR K;  5M3F K;  3S15 C;  2NVT C;  4A3D K;  3HKZ L;  5C4X K;  4C3I K;  1TWA K;  3K7A K;  3FKI C;  3M3Y C;  4QIW L;  4MQ9 A;  5TMC A;  2PMZ D;  4AYB L;  3S1M K;  5IYD C;  1TWF K;  3S15 K;  1XPP A;  3S16 C;  5IYB K;  1I50 C;  2NVT K;  2O5I A;  1I3Q K;  4XSZ A;  3I4M C;  1I6H K;  4A3E C;  3WOD A;  2JA8 C;  4YFN A;  4XLN A;  3RZD C;  3GTJ K;  3FKI K;  3M3Y K;  4GZY A;  4OIP A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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