3GTGC

Backtracked rna polymerase ii complex with 12mer rna
Total Genus 49
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
49
sequence length
271
structure length
271
Chain Sequence
SEEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQDKVNF
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Structural basis of transcription: backtracked RNA polymerase II at 3.4 angstrom resolution.
pubmed doi rcsb
molecule tags Transcription, transferase/dna/rna hybrid
total genus 49
structure length 271
sequence length 271
ec nomenclature
pdb deposition date 2009-03-27

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3gtgC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3gtgC01
3CQZK 3RZOC 3M4OC 1I3QK 3S16C 2A6EA 3GTOK 1TWCK 2E2HK 4C3HC 2YU9C 1TWAC 4LK0A 2JA5C 4A3CC 1ZYRA 4MQ9A 3S1MC 3HOUK 3GTJK 4YG2A 2A68A 5TMCA 3HOWC 5IP9K 3RZDK 4KMUA 3PO3C 3GTMC 5M3FK 4A3LK 3GTLK 2NVXC 5D4DA 4X6AK 3HKZD 5FLMC 3HKZL 4Y7NK 3RZOK 4Q4ZA 3M4OK 2A69A 3S16K 2E2JK 3PO2K 1I6HC 3S14K 2JA6C 5M5XK 3S1NK 2YU9K 4NOIA 1TWAK 2R93K 2JA5K 4A3CK 3HOVC 4A3BC 3S1MK 3S1QK 1BDFA 3S17C 5C4XC 2PA8D 3FKIC 4Y7NC 2PA8L 3HOWK 1YNNA 3PO3K 2E2JC 2JA7K 3PO2C 4A3MC 3GTMK 3GTQC 3S14C 5C3EC 3S1NC 1TWGK 2WB1D 4KN4A 2WB1L 2R93C 4C3IK 5FLMK 2NVYK 2NVXK 2PMZD 2PMZL 5M5YK 2JA8K 3GTKC 3S1QC 4A3GK 1I6HK 1K83K 2JA6K 4G7OA 4AYBD 2JA7C 4AYBL 5IYBC 4A3JC 3S15C 5C4JC 4BY7C 2E2IC 4G7HA 4BBSC 3HOVK 4XSXA 1TWGC 4A3BK 4C3IC 4QJVB 2NVYC 3S17K 5C4XK 3FKIK 4A3KK 3I4MK 4YFXA 2JA8C 4LJZA 4A3GC 2BE5A 4A3MK 4A93C 1K83C 4A3IK 3GTGC 3GTQK 4BBSK 5C3EK 1I50C 4BBRK 5C44C 4XLNA 2PPBA 3M3YK 2B63C 3H0GC 4Y52K 3K7AC 4C3JC 3HOZC 3GTKK 4A3KC 1HQMA 3I4MC 4A3DC 2NVQC 2NVTC 4C2MK 5IP7K 4OIOA 1TWHC 4KN7A 4A3IC 5IYBK 5C4JK 4A3JK 2E2IK 3S15K 4BY7K 2CW0A 4G7ZA 4BBRC 1WCMK 3M3YC 4A3FK 4BXXK 4Y52C 2O5JA 2Y0SD 2Y0SL 5M5WK 3HOYK 3GTPC 4A93K 5IYDC 3GTGK 4XLPA 4C2MC 4YFKA 3S2DC 1I50K 5IP7C 2R7ZC 5C44K 1Y1WC 2B63K 3H0GK 3K7AK 4C3JK 3HOZK 1WCMC 4A3FC 4JK1A 4LLGA 4BXXC 1TWFK 3HOYC 4A3DK 2NVQK 3S2HC 2NVTK 3S1RC 4MEXA 2VUMC 3DXJA 2O5IA 3I4NC 1TWHK 4BY1K 3H3VD 3H3VL 4A3EC 4LK1A 1Y1VK 2R92C 1SMYA 3HOXC 1YNJA 5M3MK 1R9TC 1SFOC 4OIPA 3GTPK 5IYCC 1IW7A 1TWFC 4OINA 5IYDK 4GZYA 3S2DK 4QIWD 4QIWL 2R7ZK 4BY1C 5TMFA 4MEYA 1Y1WK 3CQZC 4OIQA 1Y1VC 1I3QC 3GTOC 2WAQD 2WAQL 1TWCC 2E2HC 3S2HK 2A6HA 3S1RK 2VUMK 3I4NK 4A3EK 3EQLA 4YFNA 3HOUC 3GTJC 1XPPA 3HOXK 1I6VA 2R92K 3RZDC 5IP9C 4OIRA 4QJVA 4ZH4A 1R9TK 4C3HK 1SFOK 5IYCK 4XSZA 3WODA 4A3LC 3GTLC 4X6AC 5FJ8K 4Q5SA
chains in the Genus database with same CATH superfamily
3CQZK 1O26A 1B4BA 1I3QK 3S16C 2A6EA 3GTOK 1TWCK 1GE9A 1WOSA 4A3CC 3S1MC 4GTBA 3GTJK 3HOUK 4YG2A 5TMCA 3HOWC 3JSTA 3RZDK 3BP8C 3GTLK 2NVXC 2GSUA 3HKZD 2XCRB 3N0BA 2E2JK 3PO2K 1I6HC 1O2BA 2JA6C 3S1NK 2YU9K 1TWAK 4ILDA 2R93K 2E2IA 1JOEA 3S0XA 3S1QK 5IOQA 3S17C 1IS1A 2PA8L 1XXBA 1O2AA 3PO3K 5DM7S 2WB1L 3LPXA 4RMFA 1XZPA 3H0GA 4GT9A 2L5NA 1EH1A 3FKIA 4GTAA 2FQTA 2JA7C 1J6XA 3S15C 4BBSC 4KMDA 3HOVK 2PHCB 4C3IC 2NVYC 3I4MK 1BS2A 3GTKA 1K83C 3FOEA 3GTGC 1I50C 1WQHA 4GFQA 4BBRK 4XLNA 1HQMA 1UV7A 4A3DC 2NVQC 1PJ6A 5L46A 5IYBK 4A3JK 1TWHC 4A3IC 2E2IK 2GSNA 3TTGA 3CF5S 1WCMK 3M3YC 2KPUA 1PJ7A 3Q3QA 1SFOA 4WJ4A 1TWFA 4KARA 1DD5A 4XLPA 3S2DC 3GEEA 1J98A 1Y1WC 2RGRA 2B63K 3H0GK 3K7AK 3PIPS 5CJ9A 3CAGA 3HOYC 2NVTK 3S1RC 4MEXA 2D6FC 3H3VD 1J6WA 3HOXC 1O29A 3VA7A 3GTPK 4OIPA 4OINA 3GSIA 1X31C 4BY1C 4MEYA 1Y1VC 4XCHA 2WAQD 4P5AA 2FQOA 1R9TA 2VUMK 4KM9A 4WFBS 1I3QA 1SFOK 1TWCA 4A3LC 4U67S 4KDDA 4X6AC 4Q5SA 3M4OC 3ERED 2E2HK 4C3HC 5EGEA 4LK0A 5DM6S 1ZYRA 4MQ9A 3GTLA 1XZQB 5TJ3A 5IP9K 3V4GA 4DDQA 3NUHA 2YU9A 1JVIA 1TWAA 2R93A 4PAAA 3RZOK 4Q4ZA 2A69A 2ZUFA 5M5XK 2JA5K 4GTCA 1WQGA 5JVOA 3FKIC 4Y7NC 5EGHA 2JA7K 3GTMK 4A3MC 3GTQC 1WQFA 4WFAS 3S14C 5C3EC 3AD7C 4KN4A 4C3IK 5FLMK 2NVYK 5JVHS 4WF9S 1IQ0A 2PMZD 3GTKC 2P8TA 1K83K 1L0WA 4AYBL 1ISEA 1DCOA 3G4CA 5C4JC 5JFEA 1TWGC 4A3BK 5C4XK 2JA8C 4LJZA 3T01A 4A3IK 3AQPA 3M3YK 4BLBA 2ZUEA 1RU0A 1WCMA 1DCPA 4A3KC 2CFAA 1BJTA 4OIOA 4BY7K 4KN7A 3LAPA 1ZXOA 4G7ZA 1XZQA 2B63A 5M5WK 2Y0SD 3HOYK 2KWAA 1XXCA 4A93K 5IYDC 4C2MC 5IP7C 5C44K 4WFNS 1V5VA 4C3JK 3HOZK 3FOFA 4BXXC 3HXAA 1VLOA 3T02A 3PIOS 4GTEA 3S2HC 3GTPA 4AH6A 4BY1K 3I4NC 1VGXA 1YX2A 4KASA 1Y1VK 1SMYA 2RH6A 3BP3A 1R9TC 4O2DA 4GZYA 4QIWD 2VUMA 2R7ZK 5TMFA 3CQZC 1I3QC 4BKWA 3GTOC 1TWCC 4WJ3M 4A3EK 4YFNA 3HOUC 3GTJC 2R92K 1EQRA 3GEIA 3RZDC 3ADAC 4ZH4A 2KQ1A 4LOWA 3OEPA 3N0CA 4LR2A 4C3HK 5IYCK 2E2HA 3TFIA 3GTLC 1B4AA 1F93A 2EBBA 1IE0A 1WSVA 3AH5A 2JA6A 2YU9C 1TWAC 4BLAA 2KXYA 4IOAS 3PO3C 1O28A 3L4JA 3HKZL 2JA5A 4Y7NK 1WORA 3S16K 3S14K 2JA7A 3GTMA 4NOIA 4A3CK 3HOVC 3S1MK 2GAHC 2NVYA 3HOWK 2PA8D 4GTDA 2CFAB 1K83A 2NVXK 1TWGK 2WB1D 1I50A 3OPFA 1EFWA 2JA8K 1O24A 5E68A 2V6TA 1I6HK 2JA6K 4G7OA 3AQOA 3T00A 5IYBC 4A3JC 2E2IC 4G7HA 3SZZA 3S17K 3DLLS 4A3KK 4YFXA 4A3GC 2BE5A 4KAWX 3SZYA 2JH3A 2PPBA 2B63C 3H0GC 2ZJRS 2L3UA 3K7AC 1O2FB 3AD8C 2V6UA 4C2MK 2NVTC 2ZJQS 4GTLA 5IP7K 3S15K 4BBSK 2CW0A 1FEUA 4BXXK 4Y52C 4LQYA 2Y3PA 3GTPC 5HL8A 2W7VA 3MMLB 3GTGK 4YFKA 1I50K 4G0UA 1Y1VA 4A3FC 4JK1A 4LLGA 4A3DK 2NVQK 2VUMC 1JQWA 1KQ4A 3DXJA 1TWHK 3H3VL 4LK1A 2R7ZA 1AB4A 5M3MK 1SFOC 1TWFC 4IO9S 3S2DK 1Y1WK 1WOOA 3TFJA 1IL2A 2R92A 2WAQL 2E2HC 4KMHA 4P9SA 1F7VA 1IBAA 3S1RK 1HI9A 5HQHA 1VRQC 2P5MA 3EQLA 4KB4A 3HOXK 1DCHA 4G0VA 5IP9C 4OIRA 4P5BA 1PJ5A 2XCQA 3A8KA 4KMAA 3TFHA 1WSRA 3G4AA 3RZOC 5FJ8K 1VJEA 4KM8A 3BUEA 2JA5C 1INNA 2A68A 4GTFA 4KMUA 3GTMC 2ZFZA 4WCES 3GTQA 5M3FK 4A3LK 5D4DA 4X6AK 5FLMC 3M4OK 1BGWA 1USMA 5CHPA 1O27A 4A3BC 1TWGA 3LAJA 2NVXA 1BDFA 3AD9C 3QX3A 5C4XC 4KB2A 1YNNA 4J3NA 2E2JC 3PO2C 3GDZA 3S1NC 2R93C 2PMZL 5M5YK 3S1QC 4A3GK 4IOCS 4AYBD 4BY7C 1O25A 4XSXA 1EI6A 5HL7S 2XCOA 4QJVB 3OREA 3FKIK 1USOA 1ZBSA 3L4KA 1G51A 1EK8A 4A3MK 4A93C 3GTQK 5C3EK 1C0AA 5C44C 1ZQ1C 1VH2A 4Y52K 4C3JC 3HOZC 3GTKK 2ZJPS 3I4MC 5C4JK 3GTGA 4BBRC 4A3FK 3N3YA 2O5JA 2Y0SL 1WIHA 2GSOA 5JVGS 2R7ZC 1TWHA 3CQZA 1WCMC 1J6VA 1YCLA 3GTOA 3FHZA 1TWFK 1XXAA 2O5IA 2GAGC 4M1XA 5IOTA 4A3EC 2R92C 3GTJA 3GEHA 3LYWA 4FZBA 1F7UA 1Y1WA 1YNJA 4KC6A 3A8IA 5IYCC 1IW7A 5IYDK 4WILA 4G0WA 5IOSA 3GIRA 1XZPB 1ZVUA 4QIWL 4C45A 4OIQA 5IORA 3S2HK 2A6HA 4PABA 3I4NK 3A8JA 1XPPA 4KATA 1I6VA 4FM9A 3IPJA 4QJVA 1F9NA 1R9TK 4XSZA 3WODA 2V6SA 1WOPA
chains in the Genus database with same CATH topology
3CQZK 3RZOC 3M4OC 1I3QK 3S16C 2A6EA 3GTOK 1TWCK 2E2HK 4C3HC 2YU9C 1TWAC 4LK0A 2JA5C 4A3CC 1ZYRA 4MQ9A 3S1MC 3HOUK 3GTJK 4YG2A 2A68A 5TMCA 3HOWC 5IP9K 3RZDK 4KMUA 3PO3C 3GTMC 5M3FK 4A3LK 3GTLK 2NVXC 5D4DA 4X6AK 3HKZD 5FLMC 3HKZL 4Y7NK 3RZOK 4Q4ZA 3M4OK 2A69A 3S16K 2E2JK 3PO2K 1I6HC 3S14K 2JA6C 5M5XK 3S1NK 2YU9K 4NOIA 1TWAK 2R93K 2JA5K 4A3CK 3HOVC 4A3BC 3S1MK 3S1QK 1BDFA 3S17C 5C4XC 2PA8D 3FKIC 4Y7NC 2PA8L 3HOWK 1YNNA 3PO3K 2E2JC 2JA7K 3PO2C 4A3MC 3GTMK 3GTQC 3S14C 5C3EC 3S1NC 1TWGK 2WB1D 4KN4A 2WB1L 2R93C 4C3IK 5FLMK 2NVYK 2NVXK 2PMZD 2PMZL 5M5YK 2JA8K 3GTKC 3S1QC 4A3GK 1I6HK 1K83K 2JA6K 4G7OA 4AYBD 2JA7C 4AYBL 5IYBC 4A3JC 3S15C 5C4JC 4BY7C 2E2IC 4G7HA 4BBSC 3HOVK 4XSXA 1TWGC 4A3BK 4C3IC 4QJVB 2NVYC 3S17K 5C4XK 3FKIK 4A3KK 3I4MK 4YFXA 2JA8C 4LJZA 4A3GC 2BE5A 4A3MK 4A93C 1K83C 4A3IK 3GTGC 3GTQK 4BBSK 5C3EK 1I50C 4BBRK 5C44C 4XLNA 2PPBA 3M3YK 2B63C 3H0GC 4Y52K 3K7AC 4C3JC 3HOZC 3GTKK 4A3KC 1HQMA 3I4MC 4A3DC 2NVQC 2NVTC 4C2MK 5IP7K 4OIOA 1TWHC 4KN7A 4A3IC 5IYBK 5C4JK 4A3JK 2E2IK 3S15K 4BY7K 2CW0A 4G7ZA 4BBRC 1WCMK 3M3YC 4A3FK 4BXXK 4Y52C 2O5JA 2Y0SD 2Y0SL 5M5WK 3HOYK 3GTPC 4A93K 5IYDC 3GTGK 4XLPA 4C2MC 4YFKA 3S2DC 1I50K 5IP7C 2R7ZC 5C44K 1Y1WC 2B63K 3H0GK 3K7AK 4C3JK 3HOZK 1WCMC 4A3FC 4JK1A 4LLGA 4BXXC 1TWFK 3HOYC 4A3DK 2NVQK 3S2HC 2NVTK 3S1RC 4MEXA 2VUMC 3DXJA 2O5IA 3I4NC 1TWHK 4BY1K 3H3VD 3H3VL 4A3EC 4LK1A 1Y1VK 2R92C 1SMYA 3HOXC 1YNJA 5M3MK 1R9TC 1SFOC 4OIPA 3GTPK 5IYCC 1IW7A 1TWFC 4OINA 5IYDK 4GZYA 3S2DK 4QIWD 4QIWL 2R7ZK 4BY1C 5TMFA 4MEYA 1Y1WK 3CQZC 4OIQA 1Y1VC 1I3QC 3GTOC 2WAQD 2WAQL 1TWCC 2E2HC 3S2HK 2A6HA 3S1RK 2VUMK 3I4NK 4A3EK 3EQLA 4YFNA 3HOUC 3GTJC 1XPPA 3HOXK 1I6VA 2R92K 3RZDC 5IP9C 4OIRA 4QJVA 4ZH4A 1R9TK 4C3HK 1SFOK 5IYCK 4XSZA 3WODA 4A3LC 3GTLC 4X6AC 5FJ8K 4Q5SA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3CQZ K;  3RZO C;  3M4O C;  1I3Q K;  3S16 C;  2A6E A;  3GTO K;  1TWC K;  2E2H K;  4C3H C;  2YU9 C;  1TWA C;  4LK0 A;  2JA5 C;  4A3C C;  1ZYR A;  4MQ9 A;  3S1M C;  3HOU K;  3GTJ K;  4YG2 A;  2A68 A;  5TMC A;  3HOW C;  5IP9 K;  3RZD K;  4KMU A;  3PO3 C;  3GTM C;  5M3F K;  4A3L K;  3GTL K;  2NVX C;  5D4D A;  4X6A K;  3HKZ D;  5FLM C;  3HKZ L;  4Y7N K;  3RZO K;  4Q4Z A;  3M4O K;  2A69 A;  3S16 K;  2E2J K;  3PO2 K;  1I6H C;  3S14 K;  2JA6 C;  5M5X K;  3S1N K;  2YU9 K;  4NOI A;  1TWA K;  2R93 K;  2JA5 K;  4A3C K;  3HOV C;  4A3B C;  3S1M K;  3S1Q K;  1BDF A;  3S17 C;  5C4X C;  2PA8 D;  3FKI C;  4Y7N C;  2PA8 L;  3HOW K;  1YNN A;  3PO3 K;  2E2J C;  2JA7 K;  3PO2 C;  4A3M C;  3GTM K;  3GTQ C;  3S14 C;  5C3E C;  3S1N C;  1TWG K;  2WB1 D;  4KN4 A;  2WB1 L;  2R93 C;  4C3I K;  5FLM K;  2NVY K;  2NVX K;  2PMZ D;  2PMZ L;  5M5Y K;  2JA8 K;  3GTK C;  3S1Q C;  4A3G K;  1I6H K;  1K83 K;  2JA6 K;  4G7O A;  4AYB D;  2JA7 C;  4AYB L;  5IYB C;  4A3J C;  3S15 C;  5C4J C;  4BY7 C;  2E2I C;  4G7H A;  4BBS C;  3HOV K;  4XSX A;  1TWG C;  4A3B K;  4C3I C;  4QJV B;  2NVY C;  3S17 K;  5C4X K;  3FKI K;  4A3K K;  3I4M K;  4YFX A;  2JA8 C;  4LJZ A;  4A3G C;  2BE5 A;  4A3M K;  4A93 C;  1K83 C;  4A3I K;  3GTG C;  3GTQ K;  4BBS K;  5C3E K;  1I50 C;  4BBR K;  5C44 C;  4XLN A;  2PPB A;  3M3Y K;  2B63 C;  3H0G C;  4Y52 K;  3K7A C;  4C3J C;  3HOZ C;  3GTK K;  4A3K C;  1HQM A;  3I4M C;  4A3D C;  2NVQ C;  2NVT C;  4C2M K;  5IP7 K;  4OIO A;  1TWH C;  4KN7 A;  4A3I C;  5IYB K;  5C4J K;  4A3J K;  2E2I K;  3S15 K;  4BY7 K;  2CW0 A;  4G7Z A;  4BBR C;  1WCM K;  3M3Y C;  4A3F K;  4BXX K;  4Y52 C;  2O5J A;  2Y0S D;  2Y0S L;  5M5W K;  3HOY K;  3GTP C;  4A93 K;  5IYD C;  3GTG K;  4XLP A;  4C2M C;  4YFK A;  3S2D C;  1I50 K;  5IP7 C;  2R7Z C;  5C44 K;  1Y1W C;  2B63 K;  3H0G K;  3K7A K;  4C3J K;  3HOZ K;  1WCM C;  4A3F C;  4JK1 A;  4LLG A;  4BXX C;  1TWF K;  3HOY C;  4A3D K;  2NVQ K;  3S2H C;  2NVT K;  3S1R C;  4MEX A;  2VUM C;  3DXJ A;  2O5I A;  3I4N C;  1TWH K;  4BY1 K;  3H3V D;  3H3V L;  4A3E C;  4LK1 A;  1Y1V K;  2R92 C;  1SMY A;  3HOX C;  1YNJ A;  5M3M K;  1R9T C;  1SFO C;  4OIP A;  3GTP K;  5IYC C;  1IW7 A;  1TWF C;  4OIN A;  5IYD K;  4GZY A;  3S2D K;  4QIW D;  4QIW L;  2R7Z K;  4BY1 C;  5TMF A;  4MEY A;  1Y1W K;  3CQZ C;  4OIQ A;  1Y1V C;  1I3Q C;  3GTO C;  2WAQ D;  2WAQ L;  1TWC C;  2E2H C;  3S2H K;  2A6H A;  3S1R K;  2VUM K;  3I4N K;  4A3E K;  3EQL A;  4YFN A;  3HOU C;  3GTJ C;  1XPP A;  3HOX K;  1I6V A;  2R92 K;  3RZD C;  5IP9 C;  4OIR A;  4QJV A;  4ZH4 A;  1R9T K;  4C3H K;  1SFO K;  5IYC K;  4XSZ A;  3WOD A;  4A3L C;  3GTL C;  4X6A C;  5FJ8 K;  4Q5S A; 
#chains in the Genus database with same CATH topology
 3CQZ K;  1O26 A;  1B4B A;  1I3Q K;  3S16 C;  2A6E A;  3GTO K;  1TWC K;  1GE9 A;  1WOS A;  4A3C C;  3S1M C;  4GTB A;  3GTJ K;  3HOU K;  4YG2 A;  5TMC A;  3HOW C;  3JST A;  3RZD K;  3BP8 C;  3GTL K;  2NVX C;  2GSU A;  3HKZ D;  2XCR B;  3N0B A;  2E2J K;  3PO2 K;  1I6H C;  1O2B A;  2JA6 C;  3S1N K;  2YU9 K;  1TWA K;  4ILD A;  2R93 K;  2E2I A;  1JOE A;  3S0X A;  3S1Q K;  5IOQ A;  3S17 C;  1IS1 A;  2PA8 L;  1XXB A;  1O2A A;  3PO3 K;  5DM7 S;  2WB1 L;  3LPX A;  4RMF A;  1XZP A;  3H0G A;  4GT9 A;  2L5N A;  1EH1 A;  3FKI A;  4GTA A;  2FQT A;  2JA7 C;  1J6X A;  3S15 C;  4BBS C;  4KMD A;  3HOV K;  2PHC B;  4C3I C;  2NVY C;  3I4M K;  1BS2 A;  3GTK A;  1K83 C;  3FOE A;  3GTG C;  1I50 C;  1WQH A;  4GFQ A;  4BBR K;  4XLN A;  1HQM A;  1UV7 A;  4A3D C;  2NVQ C;  1PJ6 A;  5L46 A;  5IYB K;  4A3J K;  1TWH C;  4A3I C;  2E2I K;  2GSN A;  3TTG A;  3CF5 S;  1WCM K;  3M3Y C;  2KPU A;  1PJ7 A;  3Q3Q A;  1SFO A;  4WJ4 A;  1TWF A;  4KAR A;  1DD5 A;  4XLP A;  3S2D C;  3GEE A;  1J98 A;  1Y1W C;  2RGR A;  2B63 K;  3H0G K;  3K7A K;  3PIP S;  5CJ9 A;  3CAG A;  3HOY C;  2NVT K;  3S1R C;  4MEX A;  2D6F C;  3H3V D;  1J6W A;  3HOX C;  1O29 A;  3VA7 A;  3GTP K;  4OIP A;  4OIN A;  3GSI A;  1X31 C;  4BY1 C;  4MEY A;  1Y1V C;  4XCH A;  2WAQ D;  4P5A A;  2FQO A;  1R9T A;  2VUM K;  4KM9 A;  4WFB S;  1I3Q A;  1SFO K;  1TWC A;  4A3L C;  4U67 S;  4KDD A;  4X6A C;  4Q5S A;  3M4O C;  3ERE D;  2E2H K;  4C3H C;  5EGE A;  4LK0 A;  5DM6 S;  1ZYR A;  4MQ9 A;  3GTL A;  1XZQ B;  5TJ3 A;  5IP9 K;  3V4G A;  4DDQ A;  3NUH A;  2YU9 A;  1JVI A;  1TWA A;  2R93 A;  4PAA A;  3RZO K;  4Q4Z A;  2A69 A;  2ZUF A;  5M5X K;  2JA5 K;  4GTC A;  1WQG A;  5JVO A;  3FKI C;  4Y7N C;  5EGH A;  2JA7 K;  3GTM K;  4A3M C;  3GTQ C;  1WQF A;  4WFA S;  3S14 C;  5C3E C;  3AD7 C;  4KN4 A;  4C3I K;  5FLM K;  2NVY K;  5JVH S;  4WF9 S;  1IQ0 A;  2PMZ D;  3GTK C;  2P8T A;  1K83 K;  1L0W A;  4AYB L;  1ISE A;  1DCO A;  3G4C A;  5C4J C;  5JFE A;  1TWG C;  4A3B K;  5C4X K;  2JA8 C;  4LJZ A;  3T01 A;  4A3I K;  3AQP A;  3M3Y K;  4BLB A;  2ZUE A;  1RU0 A;  1WCM A;  1DCP A;  4A3K C;  2CFA A;  1BJT A;  4OIO A;  4BY7 K;  4KN7 A;  3LAP A;  1ZXO A;  4G7Z A;  1XZQ A;  2B63 A;  5M5W K;  2Y0S D;  3HOY K;  2KWA A;  1XXC A;  4A93 K;  5IYD C;  4C2M C;  5IP7 C;  5C44 K;  4WFN S;  1V5V A;  4C3J K;  3HOZ K;  3FOF A;  4BXX C;  3HXA A;  1VLO A;  3T02 A;  3PIO S;  4GTE A;  3S2H C;  3GTP A;  4AH6 A;  4BY1 K;  3I4N C;  1VGX A;  1YX2 A;  4KAS A;  1Y1V K;  1SMY A;  2RH6 A;  3BP3 A;  1R9T C;  4O2D A;  4GZY A;  4QIW D;  2VUM A;  2R7Z K;  5TMF A;  3CQZ C;  1I3Q C;  4BKW A;  3GTO C;  1TWC C;  4WJ3 M;  4A3E K;  4YFN A;  3HOU C;  3GTJ C;  2R92 K;  1EQR A;  3GEI A;  3RZD C;  3ADA C;  4ZH4 A;  2KQ1 A;  4LOW A;  3OEP A;  3N0C A;  4LR2 A;  4C3H K;  5IYC K;  2E2H A;  3TFI A;  3GTL C;  1B4A A;  1F93 A;  2EBB A;  1IE0 A;  1WSV A;  3AH5 A;  2JA6 A;  2YU9 C;  1TWA C;  4BLA A;  2KXY A;  4IOA S;  3PO3 C;  1O28 A;  3L4J A;  3HKZ L;  2JA5 A;  4Y7N K;  1WOR A;  3S16 K;  3S14 K;  2JA7 A;  3GTM A;  4NOI A;  4A3C K;  3HOV C;  3S1M K;  2GAH C;  2NVY A;  3HOW K;  2PA8 D;  4GTD A;  2CFA B;  1K83 A;  2NVX K;  1TWG K;  2WB1 D;  1I50 A;  3OPF A;  1EFW A;  2JA8 K;  1O24 A;  5E68 A;  2V6T A;  1I6H K;  2JA6 K;  4G7O A;  3AQO A;  3T00 A;  5IYB C;  4A3J C;  2E2I C;  4G7H A;  3SZZ A;  3S17 K;  3DLL S;  4A3K K;  4YFX A;  4A3G C;  2BE5 A;  4KAW X;  3SZY A;  2JH3 A;  2PPB A;  2B63 C;  3H0G C;  2ZJR S;  2L3U A;  3K7A C;  1O2F B;  3AD8 C;  2V6U A;  4C2M K;  2NVT C;  2ZJQ S;  4GTL A;  5IP7 K;  3S15 K;  4BBS K;  2CW0 A;  1FEU A;  4BXX K;  4Y52 C;  4LQY A;  2Y3P A;  3GTP C;  5HL8 A;  2W7V A;  3MML B;  3GTG K;  4YFK A;  1I50 K;  4G0U A;  1Y1V A;  4A3F C;  4JK1 A;  4LLG A;  4A3D K;  2NVQ K;  2VUM C;  1JQW A;  1KQ4 A;  3DXJ A;  1TWH K;  3H3V L;  4LK1 A;  2R7Z A;  1AB4 A;  5M3M K;  1SFO C;  1TWF C;  4IO9 S;  3S2D K;  1Y1W K;  1WOO A;  3TFJ A;  1IL2 A;  2R92 A;  2WAQ L;  2E2H C;  4KMH A;  4P9S A;  1F7V A;  1IBA A;  3S1R K;  1HI9 A;  5HQH A;  1VRQ C;  2P5M A;  3EQL A;  4KB4 A;  3HOX K;  1DCH A;  4G0V A;  5IP9 C;  4OIR A;  4P5B A;  1PJ5 A;  2XCQ A;  3A8K A;  4KMA A;  3TFH A;  1WSR A;  3G4A A;  3RZO C;  5FJ8 K;  1VJE A;  4KM8 A;  3BUE A;  2JA5 C;  1INN A;  2A68 A;  4GTF A;  4KMU A;  3GTM C;  2ZFZ A;  4WCE S;  3GTQ A;  5M3F K;  4A3L K;  5D4D A;  4X6A K;  5FLM C;  3M4O K;  1BGW A;  1USM A;  5CHP A;  1O27 A;  4A3B C;  1TWG A;  3LAJ A;  2NVX A;  1BDF A;  3AD9 C;  3QX3 A;  5C4X C;  4KB2 A;  1YNN A;  4J3N A;  2E2J C;  3PO2 C;  3GDZ A;  3S1N C;  2R93 C;  2PMZ L;  5M5Y K;  3S1Q C;  4A3G K;  4IOC S;  4AYB D;  4BY7 C;  1O25 A;  4XSX A;  1EI6 A;  5HL7 S;  2XCO A;  4QJV B;  3ORE A;  3FKI K;  1USO A;  1ZBS A;  3L4K A;  1G51 A;  1EK8 A;  4A3M K;  4A93 C;  3GTQ K;  5C3E K;  1C0A A;  5C44 C;  1ZQ1 C;  1VH2 A;  4Y52 K;  4C3J C;  3HOZ C;  3GTK K;  2ZJP S;  3I4M C;  5C4J K;  3GTG A;  4BBR C;  4A3F K;  3N3Y A;  2O5J A;  2Y0S L;  1WIH A;  2GSO A;  5JVG S;  2R7Z C;  1TWH A;  3CQZ A;  1WCM C;  1J6V A;  1YCL A;  3GTO A;  3FHZ A;  1TWF K;  1XXA A;  2O5I A;  2GAG C;  4M1X A;  5IOT A;  4A3E C;  2R92 C;  3GTJ A;  3GEH A;  3LYW A;  4FZB A;  1F7U A;  1Y1W A;  1YNJ A;  4KC6 A;  3A8I A;  5IYC C;  1IW7 A;  5IYD K;  4WIL A;  4G0W A;  5IOS A;  3GIR A;  1XZP B;  1ZVU A;  4QIW L;  4C45 A;  4OIQ A;  5IOR A;  3S2H K;  2A6H A;  4PAB A;  3I4N K;  3A8J A;  1XPP A;  4KAT A;  1I6V A;  4FM9 A;  3IPJ A;  4QJV A;  1F9N A;  1R9T K;  4XSZ A;  3WOD A;  2V6S A;  1WOP A; 
#chains in the Genus database with same CATH homology
 3CQZ K;  3RZO C;  3M4O C;  1I3Q K;  3S16 C;  2A6E A;  3GTO K;  1TWC K;  2E2H K;  4C3H C;  2YU9 C;  1TWA C;  4LK0 A;  2JA5 C;  4A3C C;  1ZYR A;  4MQ9 A;  3S1M C;  3HOU K;  3GTJ K;  4YG2 A;  2A68 A;  5TMC A;  3HOW C;  5IP9 K;  3RZD K;  4KMU A;  3PO3 C;  3GTM C;  5M3F K;  4A3L K;  3GTL K;  2NVX C;  5D4D A;  4X6A K;  3HKZ D;  5FLM C;  3HKZ L;  4Y7N K;  3RZO K;  4Q4Z A;  3M4O K;  2A69 A;  3S16 K;  2E2J K;  3PO2 K;  1I6H C;  3S14 K;  2JA6 C;  5M5X K;  3S1N K;  2YU9 K;  4NOI A;  1TWA K;  2R93 K;  2JA5 K;  4A3C K;  3HOV C;  4A3B C;  3S1M K;  3S1Q K;  1BDF A;  3S17 C;  5C4X C;  2PA8 D;  3FKI C;  4Y7N C;  2PA8 L;  3HOW K;  1YNN A;  3PO3 K;  2E2J C;  2JA7 K;  3PO2 C;  4A3M C;  3GTM K;  3GTQ C;  3S14 C;  5C3E C;  3S1N C;  1TWG K;  2WB1 D;  4KN4 A;  2WB1 L;  2R93 C;  4C3I K;  5FLM K;  2NVY K;  2NVX K;  2PMZ D;  2PMZ L;  5M5Y K;  2JA8 K;  3GTK C;  3S1Q C;  4A3G K;  1I6H K;  1K83 K;  2JA6 K;  4G7O A;  4AYB D;  2JA7 C;  4AYB L;  5IYB C;  4A3J C;  3S15 C;  5C4J C;  4BY7 C;  2E2I C;  4G7H A;  4BBS C;  3HOV K;  4XSX A;  1TWG C;  4A3B K;  4C3I C;  4QJV B;  2NVY C;  3S17 K;  5C4X K;  3FKI K;  4A3K K;  3I4M K;  4YFX A;  2JA8 C;  4LJZ A;  4A3G C;  2BE5 A;  4A3M K;  4A93 C;  1K83 C;  4A3I K;  3GTG C;  3GTQ K;  4BBS K;  5C3E K;  1I50 C;  4BBR K;  5C44 C;  4XLN A;  2PPB A;  3M3Y K;  2B63 C;  3H0G C;  4Y52 K;  3K7A C;  4C3J C;  3HOZ C;  3GTK K;  4A3K C;  1HQM A;  3I4M C;  4A3D C;  2NVQ C;  2NVT C;  4C2M K;  5IP7 K;  4OIO A;  1TWH C;  4KN7 A;  4A3I C;  5IYB K;  5C4J K;  4A3J K;  2E2I K;  3S15 K;  4BY7 K;  2CW0 A;  4G7Z A;  4BBR C;  1WCM K;  3M3Y C;  4A3F K;  4BXX K;  4Y52 C;  2O5J A;  2Y0S D;  2Y0S L;  5M5W K;  3HOY K;  3GTP C;  4A93 K;  5IYD C;  3GTG K;  4XLP A;  4C2M C;  4YFK A;  3S2D C;  1I50 K;  5IP7 C;  2R7Z C;  5C44 K;  1Y1W C;  2B63 K;  3H0G K;  3K7A K;  4C3J K;  3HOZ K;  1WCM C;  4A3F C;  4JK1 A;  4LLG A;  4BXX C;  1TWF K;  3HOY C;  4A3D K;  2NVQ K;  3S2H C;  2NVT K;  3S1R C;  4MEX A;  2VUM C;  3DXJ A;  2O5I A;  3I4N C;  1TWH K;  4BY1 K;  3H3V D;  3H3V L;  4A3E C;  4LK1 A;  1Y1V K;  2R92 C;  1SMY A;  3HOX C;  1YNJ A;  5M3M K;  1R9T C;  1SFO C;  4OIP A;  3GTP K;  5IYC C;  1IW7 A;  1TWF C;  4OIN A;  5IYD K;  4GZY A;  3S2D K;  4QIW D;  4QIW L;  2R7Z K;  4BY1 C;  5TMF A;  4MEY A;  1Y1W K;  3CQZ C;  4OIQ A;  1Y1V C;  1I3Q C;  3GTO C;  2WAQ D;  2WAQ L;  1TWC C;  2E2H C;  3S2H K;  2A6H A;  3S1R K;  2VUM K;  3I4N K;  4A3E K;  3EQL A;  4YFN A;  3HOU C;  3GTJ C;  1XPP A;  3HOX K;  1I6V A;  2R92 K;  3RZD C;  5IP9 C;  4OIR A;  4QJV A;  4ZH4 A;  1R9T K;  4C3H K;  1SFO K;  5IYC K;  4XSZ A;  3WOD A;  4A3L C;  3GTL C;  4X6A C;  5FJ8 K;  4Q5S A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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