3GTGC

Backtracked rna polymerase ii complex with 12mer rna
Total Genus 49
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
49
sequence length
271
structure length
271
Chain Sequence
SEEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQDKVNF
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural basis of transcription: backtracked RNA polymerase II at 3.4 angstrom resolution.
pubmed doi rcsb
molecule tags Transcription, transferase/dna/rna hybrid
molecule keywords DNA-directed RNA polymerase II subunit RPB1
total genus 49
structure length 271
sequence length 271
ec nomenclature
pdb deposition date 2009-03-27

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3gtgC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3gtgC01
2WAQD 5IYCC 3HKZD 3M4OC 2E2HK 4A3GC 4MEXA 4XLNA 3H3VL 4LK0A 3S14C 1K83K 4XSZA 2E2JC 1TWCC 3HOZC 3CQZC 4C3JC 2R93K 1TWFK 2B63C 4A3BC 2Y0SL 1R9TK 2YU9C 3S14K 1SMYA 4C3IC 2E2JK 3HOZK 5IYDK 3S17K 1ZYRA 4YG2A 2CW0A 4A3BK 2PPBA 2JA7K 1YNJA 2NVYK 4A3CC 1I50C 5TMCA 4A93C 5C4XK 4BY7C 4QJVA 4OIOA 3GTLC 4A3IK 2VUMC 4AYBL 2PA8L 2JA8C 1TWHC 1XPPA 5IYBK 2E2IK 2R92C 4Q5SA 4A3JC 2O5JA 3RZOK 4A3FC 5IP7C 3GTOC 4G7OA 4C2MK 5M5YK 3GTJK 3S1QC 3S15K 2JA5K 1Y1WC 3GTGC 3S2DC 3S1NK 4A3DC 3RZDK 4C3JK 4A3EC 3S16K 2B63K 4XLPA 3HOWK 3HOVC 1K83C 4A3LC 3GTPK 5IYDC 4Q4ZA 4BXXC 3S17C 1BDFA 2YU9K 3HOVK 4C3IK 3S1RC 4BBRK 3HOXK 4QJVB 1WCMC 3PO3K 2JA7C 3GTLK 4A3KC 4Y52K 3PO2C 4KMUA 4LK1A 5FLMC 3HOUC 4LLGA 5FJ8K 4MQ9A 3FKIK 5C3EK 2JA8K 2NVQK 4BBRC 3HOXC 5C44C 4OINA 4Y52C 3PO3C 4GZYA 4G7HA 4A3JK 1HQMA 1Y1VC 4KN4A 4KN7A 5TMFA 2NVTC 2E2IC 2A69A 5C44K 2A6EA 3GTJC 4A3MK 3GTQK 3I4MK 4X6AK 5IP7K 3GTOK 2WAQL 2R93C 1TWCK 3H3VD 3RZDC 1I6HK 4A3EK 3S16C 2NVXC 3HOWC 4AYBD 3GTGK 2E2HC 4A3DK 3DXJA 1IW7A 5M3MK 5M3FK 4A3GK 4XSXA 1I6HC 3K7AK 3H0GK 4BXXK 4QIWL 4JK1A 1SFOC 3S2HK 5C4XC 1I50K 3CQZK 3EQLA 3GTMC 2JA6K 3H0GC 3M3YK 4BY1K 1R9TC 4Y7NC 3HOYC 2Y0SD 5FLMK 5M5XK 5C3EC 2NVQC 4BBSC 4BY1C 1WCMK 4ZH4A 4A3KK 2NVYC 4A3CK 4A93K 3FKIC 4BBSK 2O5IA 4NOIA 2JA5C 4A3MC 2VUMK 3S1NC 1Y1WK 3S2DK 3M4OK 2NVTK 1TWAC 1TWGC 5IP9C 5IYCK 2NVXK 3RZOC 4C3HC 4A3FK 4OIQA 4X6AC 2PA8D 1TWAK 1TWGK 5IP9K 3K7AC 3S15C 2PMZL 3S1QK 4C3HK 5C4JK 3WODA 4BY7K 4OIRA 3I4NK 1TWFC 2WB1D 5D4DA 4YFKA 2JA6C 3M3YC 3GTMK 1I3QK 2A6HA 5C4JC 3S2HC 1SFOK 3GTPC 4LJZA 3I4NC 4A3LK 4MEYA 4YFXA 2R7ZC 1I6VA 1I3QC 4OIPA 4G7ZA 2BE5A 4A3IC 3S1MC 2WB1L 1YNNA 4Y7NK 1Y1VK 4YFNA 3S1RK 3HOYK 5IYBC 3GTKC 2R7ZK 3S1MK 2PMZD 3PO2K 3GTQC 3I4MC 3HOUK 1TWHK 5M5WK 2A68A 3HKZL 4C2MC 3GTKK 2R92K 4QIWD
chains in the Genus database with same CATH superfamily
4XCHA 4KMDA 3S14C 1K83K 5HL8A 2E2JC 3CQZC 1EFWA 4WCES 1IS1A 1R9TK 1SMYA 4IOAS 3QX3A 3HOZK 5IYDK 4KB4A 4YG2A 4PABA 3GIRA 3A8KA 1F93A 4A3CC 5TMCA 4J3NA 4BY7C 5CHPA 1TWHA 4AH6A 5IYBK 3GTKA 4BKWA 3BP8C 2R92C 1ZVUA 4WF9S 2O5JA 1YCLA 4A3FC 1B4BA 1USOA 2GSOA 3S2DC 4KC6A 4C3JK 2R92A 3OEPA 3HOVC 3FOEA 3GTPK 5IYDC 1UV7A 3FHZA 3TFIA 5DM7S 1WOSA 1B4AA 4BBRK 2JA7C 3PO2C 5FJ8K 5FLMC 5HL7S 4BY7K 5C3EK 1WOPA 5C44C 4OINA 1WSRA 4GZYA 3LAPA 4G7HA 5TMFA 2NVYA 2E2IC 4DDQA 1FEUA 1J6WA 5IP7K 3GTOK 5DM6S 3N0CA 4A3DK 1XZPB 1IW7A 2GAGC 5M3MK 1ZXOA 4QIWL 4BLAA 1SFOC 4KASA 5JVHS 3GTMC 3CF5S 1O29A 1R9TC 4Y7NC 3GEEA 5C3EC 4BY1C 1WCMK 3SZYA 3S2DK 2NVTK 3G4AA 1JQWA 1TWAC 5IP9C 1R9TA 2NVXK 3LYWA 4A3FK 4X6AC 2CFAA 3AQPA 1XZPA 3S15C 5EGEA 4M1XA 2P5MA 3I4NK 1TWFC 3GTMK 4YFKA 5C4JC 3S2HC 4A3LK 1YX2A 3L4JA 2R7ZC 3H0GA 3S1MC 2BE5A 3HOYK 3S1RK 3VA7A 4GTCA 3AD7C 2R7ZK 2XCOA 3ERED 3HKZL 1V5VA 2R92K 1X31C 4IOCS 1VLOA 3A8JA 3ADAC 2E2HK 3M4OC 1VH2A 3G4CA 4A3GC 4MEXA 5TJ3A 2GSNA 2JA5A 4XSZA 1TWCC 2R93K 3N0BA 1WOOA 4WFBS 3S17K 4KMHA 4RMFA 4A3BK 2NVYK 4OIOA 3GTQA 2PA8L 1XPPA 5IP7C 3GTOC 4C2MK 2V6UA 5M5YK 3S1QC 3S1NK 4WFNS 4A3DC 1INNA 3RZDK 1DD5A 1TWFA 2L5NA 1BDFA 4WJ4A 5HQHA 2YU9K 1ISEA 4C3IK 3GTLK 4KMUA 4LK1A 3IPJA 4LLGA 1XZQA 2NVQK 3HOXC 3PO3C 4A3JK 1HQMA 4KN7A 4KDDA 4FZBA 2A6EA 4KAWX 4A3MK 4GTBA 4GT9A 3I4MK 1XZQB 2WAQL 4A3EK 4AYBD 2E2HC 2RGRA 3DXJA 5M3FK 1I6HC 3HXAA 1F9NA 4BXXK 3N3YA 2L3UA 4LQYA 3H0GC 2R7ZA 4GTFA 4G0WA 1J98A 3HOYC 4GTDA 2Y0SD 3GTPA 2RH6A 4ZH4A 3AD9C 4A3CK 1HI9A 3A8IA 2VUMK 1Y1WK 3M4OK 1WQHA 2ZJPS 2KWAA 4C3HC 5IP9K 3SZZA 3K7AC 3WODA 3TTGA 1K83A 1IL2A 2JA6C 2A6HA 3GTGA 4KB2A 4WJ3M 3NUHA 1I3QC 4Y7NK 1Y1VK 4G0VA 5IYBC 5JFEA 3GTKC 1WQFA 3PO2K 2VUMA 3HOUK 3S0XA 1BS2A 3GTKK 1YNNA 2WAQD 1WCMA 1G51A 1EK8A 1F7UA 4LR2A 3GTJA 3H3VL 3LPXA 2JH3A 5IOTA 4GTLA 2V6TA 1XXBA 4C3JC 1O24A 2ZUFA 2B63A 3S14K 1VRQC 4C3IC 1J6XA 4P5AA 1ZYRA 4FM9A 4G0UA 2PPBA 1YNJA 5L46A 5C4XK 5IOQA 4A93C 4A3IK 4U67S 2VUMC 3T00A 4A3JC 1BJTA 2GSUA 3V4GA 2V6SA 3GTJK 4O2DA 4IO9S 3GTGC 3GTOA 2JA6A 4A3EC 2B63K 4XLPA 3HOWK 1WORA 1K83C 4PAAA 4Q4ZA 4BXXC 3S17C 3LAJA 1VJEA 2FQTA 1I50A 2R93A 1O28A 1DCHA 3HOXK 4Y52K 4A3KC 2JA8K 4MQ9A 4GTEA 4Y52C 4KM9A 2A69A 5C44K 2KPUA 3GTQK 1WSVA 3H3VD 1I6HK 3S16C 2NVXC 3PIOS 3HOWC 4GTAA 3GTGK 1SFOA 2EBBA 3AH5A 4XSXA 2Y3PA 4JK1A 2XCRB 2KXYA 1I50K 3EQLA 1JVIA 3M3YK 1O2BA 1DCOA 5M5XK 1ZBSA 1ZQ1C 2ZJQS 4A3KK 2YU9A 2NVYC 2FQOA 4A93K 3FKIC 2ZJRS 4BBSK 2O5IA 2JA5C 3GTLA 5EGHA 3CAGA 3RZOC 1O26A 2PA8D 5JVGS 1PJ6A 1TWAK 1TWGK 2PMZL 3GEHA 3S1QK 1IBAA 4C3HK 2PHCB 5C4JK 1VGXA 1C0AA 1TWCA 5D4DA 2WB1D 3M3YC 1O25A 1EH1A 2KQ1A 4G7ZA 1IE0A 5E68A 4A3IC 4YFNA 1WQGA 1RU0A 3GTQC 1PJ7A 5M5WK 5IYCC 1EI6A 2NVXA 3HKZD 1TWAA 4LOWA 1TWGA 4XLNA 3BUEA 1WIHA 4LK0A 3HOZC 1PJ5A 1KQ4A 1TWFK 2B63C 4A3BC 2Y0SL 2D6FC 2YU9C 2E2JK 1BGWA 2CW0A 2JA7K 3FOFA 1I50C 4QJVA 4ILDA 1USMA 3GTLC 3PIPS 2W7VA 4AYBL 2JA8C 1TWHC 3FKIA 2E2IK 4Q5SA 3GSIA 3RZOK 1AB4A 2E2HA 3OPFA 4G7OA 3BP3A 3S15K 2JA5K 1Y1WC 4P9SA 4C45A 3S16K 3GDZA 3MMLB 3TFHA 4A3LC 3T02A 3DLLS 3T01A 3HOVK 2JA7A 3S1RC 1L0WA 4QJVB 1WCMC 3PO3K 3HOUC 3FKIK 2E2IA 4BBRC 1O2AA 3TFJA 1Y1VC 4KN4A 2NVTC 2P8TA 3GTJC 1J6VA 1Y1WA 3L4KA 4X6AK 2R93C 1TWCK 3RZDC 3GTMA 1IQ0A 4KM8A 4A3GK 3JSTA 3K7AK 3H0GK 4KMAA 2ZUEA 3S2HK 5C4XC 3CQZK 1F7VA 2JA6K 5IORA 2GAHC 4BY1K 1I3QA 1XXAA 5FLMK 2NVQC 4BBSC 4P5BA 2ZFZA 1Y1VA 4WFAS 4KATA 4NOIA 4A3MC 3S1NC 4GFQA 3AQOA 4BLBA 1TWGC 5IYCK 1GE9A 3AD8C 4OIQA 3GEIA 4WILA 1O2FB 5CJ9A 3OREA 5JVOA 1EQRA 4OIRA 3CQZA 1I3QK 1SFOK 3GTPC 4LJZA 3I4NC 1XXCA 3Q3QA 4MEYA 4YFXA 1I6VA 4OIPA 2WB1L 5IOSA 1DCPA 1JOEA 1O27A 4KARA 3S1MK 2PMZD 2CFAB 2XCQA 3I4MC 1TWHK 2A68A 4C2MC 4QIWD
chains in the Genus database with same CATH topology
2WAQD 5IYCC 3HKZD 3M4OC 2E2HK 4A3GC 4MEXA 4XLNA 3H3VL 4LK0A 3S14C 1K83K 4XSZA 2E2JC 1TWCC 3HOZC 3CQZC 4C3JC 2R93K 1TWFK 2B63C 4A3BC 2Y0SL 1R9TK 2YU9C 3S14K 1SMYA 4C3IC 2E2JK 3HOZK 5IYDK 3S17K 1ZYRA 4YG2A 2CW0A 4A3BK 2PPBA 2JA7K 1YNJA 2NVYK 4A3CC 1I50C 5TMCA 4A93C 5C4XK 4BY7C 4QJVA 4OIOA 3GTLC 4A3IK 2VUMC 4AYBL 2PA8L 2JA8C 1TWHC 1XPPA 5IYBK 2E2IK 2R92C 4Q5SA 4A3JC 2O5JA 3RZOK 4A3FC 5IP7C 3GTOC 4G7OA 4C2MK 5M5YK 3GTJK 3S1QC 3S15K 2JA5K 1Y1WC 3GTGC 3S2DC 3S1NK 4A3DC 3RZDK 4C3JK 4A3EC 3S16K 2B63K 4XLPA 3HOWK 3HOVC 1K83C 4A3LC 3GTPK 5IYDC 4Q4ZA 4BXXC 3S17C 1BDFA 2YU9K 3HOVK 4C3IK 3S1RC 4BBRK 3HOXK 4QJVB 1WCMC 3PO3K 2JA7C 3GTLK 4A3KC 4Y52K 3PO2C 4KMUA 4LK1A 5FLMC 3HOUC 4LLGA 5FJ8K 4MQ9A 3FKIK 5C3EK 2JA8K 2NVQK 4BBRC 3HOXC 5C44C 4OINA 4Y52C 3PO3C 4GZYA 4G7HA 4A3JK 1HQMA 1Y1VC 4KN4A 4KN7A 5TMFA 2NVTC 2E2IC 2A69A 5C44K 2A6EA 3GTJC 4A3MK 3GTQK 3I4MK 4X6AK 5IP7K 3GTOK 2WAQL 2R93C 1TWCK 3H3VD 3RZDC 1I6HK 4A3EK 3S16C 2NVXC 3HOWC 4AYBD 3GTGK 2E2HC 4A3DK 3DXJA 1IW7A 5M3MK 5M3FK 4A3GK 4XSXA 1I6HC 3K7AK 3H0GK 4BXXK 4QIWL 4JK1A 1SFOC 3S2HK 5C4XC 1I50K 3CQZK 3EQLA 3GTMC 2JA6K 3H0GC 3M3YK 4BY1K 1R9TC 4Y7NC 3HOYC 2Y0SD 5FLMK 5M5XK 5C3EC 2NVQC 4BBSC 4BY1C 1WCMK 4ZH4A 4A3KK 2NVYC 4A3CK 4A93K 3FKIC 4BBSK 2O5IA 4NOIA 2JA5C 4A3MC 2VUMK 3S1NC 1Y1WK 3S2DK 3M4OK 2NVTK 1TWAC 1TWGC 5IP9C 5IYCK 2NVXK 3RZOC 4C3HC 4A3FK 4OIQA 4X6AC 2PA8D 1TWAK 1TWGK 5IP9K 3K7AC 3S15C 2PMZL 3S1QK 4C3HK 5C4JK 3WODA 4BY7K 4OIRA 3I4NK 1TWFC 2WB1D 5D4DA 4YFKA 2JA6C 3M3YC 3GTMK 1I3QK 2A6HA 5C4JC 3S2HC 1SFOK 3GTPC 4LJZA 3I4NC 4A3LK 4MEYA 4YFXA 2R7ZC 1I6VA 1I3QC 4OIPA 4G7ZA 2BE5A 4A3IC 3S1MC 2WB1L 1YNNA 4Y7NK 1Y1VK 4YFNA 3S1RK 3HOYK 5IYBC 3GTKC 2R7ZK 3S1MK 2PMZD 3PO2K 3GTQC 3I4MC 3HOUK 1TWHK 5M5WK 2A68A 3HKZL 4C2MC 3GTKK 2R92K 4QIWD
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2WAQ D;  5IYC C;  3HKZ D;  3M4O C;  2E2H K;  4A3G C;  4MEX A;  4XLN A;  3H3V L;  4LK0 A;  3S14 C;  1K83 K;  4XSZ A;  2E2J C;  1TWC C;  3HOZ C;  3CQZ C;  4C3J C;  2R93 K;  1TWF K;  2B63 C;  4A3B C;  2Y0S L;  1R9T K;  2YU9 C;  3S14 K;  1SMY A;  4C3I C;  2E2J K;  3HOZ K;  5IYD K;  3S17 K;  1ZYR A;  4YG2 A;  2CW0 A;  4A3B K;  2PPB A;  2JA7 K;  1YNJ A;  2NVY K;  4A3C C;  1I50 C;  5TMC A;  4A93 C;  5C4X K;  4BY7 C;  4QJV A;  4OIO A;  3GTL C;  4A3I K;  2VUM C;  4AYB L;  2PA8 L;  2JA8 C;  1TWH C;  1XPP A;  5IYB K;  2E2I K;  2R92 C;  4Q5S A;  4A3J C;  2O5J A;  3RZO K;  4A3F C;  5IP7 C;  3GTO C;  4G7O A;  4C2M K;  5M5Y K;  3GTJ K;  3S1Q C;  3S15 K;  2JA5 K;  1Y1W C;  3GTG C;  3S2D C;  3S1N K;  4A3D C;  3RZD K;  4C3J K;  4A3E C;  3S16 K;  2B63 K;  4XLP A;  3HOW K;  3HOV C;  1K83 C;  4A3L C;  3GTP K;  5IYD C;  4Q4Z A;  4BXX C;  3S17 C;  1BDF A;  2YU9 K;  3HOV K;  4C3I K;  3S1R C;  4BBR K;  3HOX K;  4QJV B;  1WCM C;  3PO3 K;  2JA7 C;  3GTL K;  4A3K C;  4Y52 K;  3PO2 C;  4KMU A;  4LK1 A;  5FLM C;  3HOU C;  4LLG A;  5FJ8 K;  4MQ9 A;  3FKI K;  5C3E K;  2JA8 K;  2NVQ K;  4BBR C;  3HOX C;  5C44 C;  4OIN A;  4Y52 C;  3PO3 C;  4GZY A;  4G7H A;  4A3J K;  1HQM A;  1Y1V C;  4KN4 A;  4KN7 A;  5TMF A;  2NVT C;  2E2I C;  2A69 A;  5C44 K;  2A6E A;  3GTJ C;  4A3M K;  3GTQ K;  3I4M K;  4X6A K;  5IP7 K;  3GTO K;  2WAQ L;  2R93 C;  1TWC K;  3H3V D;  3RZD C;  1I6H K;  4A3E K;  3S16 C;  2NVX C;  3HOW C;  4AYB D;  3GTG K;  2E2H C;  4A3D K;  3DXJ A;  1IW7 A;  5M3M K;  5M3F K;  4A3G K;  4XSX A;  1I6H C;  3K7A K;  3H0G K;  4BXX K;  4QIW L;  4JK1 A;  1SFO C;  3S2H K;  5C4X C;  1I50 K;  3CQZ K;  3EQL A;  3GTM C;  2JA6 K;  3H0G C;  3M3Y K;  4BY1 K;  1R9T C;  4Y7N C;  3HOY C;  2Y0S D;  5FLM K;  5M5X K;  5C3E C;  2NVQ C;  4BBS C;  4BY1 C;  1WCM K;  4ZH4 A;  4A3K K;  2NVY C;  4A3C K;  4A93 K;  3FKI C;  4BBS K;  2O5I A;  4NOI A;  2JA5 C;  4A3M C;  2VUM K;  3S1N C;  1Y1W K;  3S2D K;  3M4O K;  2NVT K;  1TWA C;  1TWG C;  5IP9 C;  5IYC K;  2NVX K;  3RZO C;  4C3H C;  4A3F K;  4OIQ A;  4X6A C;  2PA8 D;  1TWA K;  1TWG K;  5IP9 K;  3K7A C;  3S15 C;  2PMZ L;  3S1Q K;  4C3H K;  5C4J K;  3WOD A;  4BY7 K;  4OIR A;  3I4N K;  1TWF C;  2WB1 D;  5D4D A;  4YFK A;  2JA6 C;  3M3Y C;  3GTM K;  1I3Q K;  2A6H A;  5C4J C;  3S2H C;  1SFO K;  3GTP C;  4LJZ A;  3I4N C;  4A3L K;  4MEY A;  4YFX A;  2R7Z C;  1I6V A;  1I3Q C;  4OIP A;  4G7Z A;  2BE5 A;  4A3I C;  3S1M C;  2WB1 L;  1YNN A;  4Y7N K;  1Y1V K;  4YFN A;  3S1R K;  3HOY K;  5IYB C;  3GTK C;  2R7Z K;  3S1M K;  2PMZ D;  3PO2 K;  3GTQ C;  3I4M C;  3HOU K;  1TWH K;  5M5W K;  2A68 A;  3HKZ L;  4C2M C;  3GTK K;  2R92 K;  4QIW D; 
#chains in the Genus database with same CATH topology
 4XCH A;  4KMD A;  3S14 C;  1K83 K;  5HL8 A;  2E2J C;  3CQZ C;  1EFW A;  4WCE S;  1IS1 A;  1R9T K;  1SMY A;  4IOA S;  3QX3 A;  3HOZ K;  5IYD K;  4KB4 A;  4YG2 A;  4PAB A;  3GIR A;  3A8K A;  1F93 A;  4A3C C;  5TMC A;  4J3N A;  4BY7 C;  5CHP A;  1TWH A;  4AH6 A;  5IYB K;  3GTK A;  4BKW A;  3BP8 C;  2R92 C;  1ZVU A;  4WF9 S;  2O5J A;  1YCL A;  4A3F C;  1B4B A;  1USO A;  2GSO A;  3S2D C;  4KC6 A;  4C3J K;  2R92 A;  3OEP A;  3HOV C;  3FOE A;  3GTP K;  5IYD C;  1UV7 A;  3FHZ A;  3TFI A;  5DM7 S;  1WOS A;  1B4A A;  4BBR K;  2JA7 C;  3PO2 C;  5FJ8 K;  5FLM C;  5HL7 S;  4BY7 K;  5C3E K;  1WOP A;  5C44 C;  4OIN A;  1WSR A;  4GZY A;  3LAP A;  4G7H A;  5TMF A;  2NVY A;  2E2I C;  4DDQ A;  1FEU A;  1J6W A;  5IP7 K;  3GTO K;  5DM6 S;  3N0C A;  4A3D K;  1XZP B;  1IW7 A;  2GAG C;  5M3M K;  1ZXO A;  4QIW L;  4BLA A;  1SFO C;  4KAS A;  5JVH S;  3GTM C;  3CF5 S;  1O29 A;  1R9T C;  4Y7N C;  3GEE A;  5C3E C;  4BY1 C;  1WCM K;  3SZY A;  3S2D K;  2NVT K;  3G4A A;  1JQW A;  1TWA C;  5IP9 C;  1R9T A;  2NVX K;  3LYW A;  4A3F K;  4X6A C;  2CFA A;  3AQP A;  1XZP A;  3S15 C;  5EGE A;  4M1X A;  2P5M A;  3I4N K;  1TWF C;  3GTM K;  4YFK A;  5C4J C;  3S2H C;  4A3L K;  1YX2 A;  3L4J A;  2R7Z C;  3H0G A;  3S1M C;  2BE5 A;  3HOY K;  3S1R K;  3VA7 A;  4GTC A;  3AD7 C;  2R7Z K;  2XCO A;  3ERE D;  3HKZ L;  1V5V A;  2R92 K;  1X31 C;  4IOC S;  1VLO A;  3A8J A;  3ADA C;  2E2H K;  3M4O C;  1VH2 A;  3G4C A;  4A3G C;  4MEX A;  5TJ3 A;  2GSN A;  2JA5 A;  4XSZ A;  1TWC C;  2R93 K;  3N0B A;  1WOO A;  4WFB S;  3S17 K;  4KMH A;  4RMF A;  4A3B K;  2NVY K;  4OIO A;  3GTQ A;  2PA8 L;  1XPP A;  5IP7 C;  3GTO C;  4C2M K;  2V6U A;  5M5Y K;  3S1Q C;  3S1N K;  4WFN S;  4A3D C;  1INN A;  3RZD K;  1DD5 A;  1TWF A;  2L5N A;  1BDF A;  4WJ4 A;  5HQH A;  2YU9 K;  1ISE A;  4C3I K;  3GTL K;  4KMU A;  4LK1 A;  3IPJ A;  4LLG A;  1XZQ A;  2NVQ K;  3HOX C;  3PO3 C;  4A3J K;  1HQM A;  4KN7 A;  4KDD A;  4FZB A;  2A6E A;  4KAW X;  4A3M K;  4GTB A;  4GT9 A;  3I4M K;  1XZQ B;  2WAQ L;  4A3E K;  4AYB D;  2E2H C;  2RGR A;  3DXJ A;  5M3F K;  1I6H C;  3HXA A;  1F9N A;  4BXX K;  3N3Y A;  2L3U A;  4LQY A;  3H0G C;  2R7Z A;  4GTF A;  4G0W A;  1J98 A;  3HOY C;  4GTD A;  2Y0S D;  3GTP A;  2RH6 A;  4ZH4 A;  3AD9 C;  4A3C K;  1HI9 A;  3A8I A;  2VUM K;  1Y1W K;  3M4O K;  1WQH A;  2ZJP S;  2KWA A;  4C3H C;  5IP9 K;  3SZZ A;  3K7A C;  3WOD A;  3TTG A;  1K83 A;  1IL2 A;  2JA6 C;  2A6H A;  3GTG A;  4KB2 A;  4WJ3 M;  3NUH A;  1I3Q C;  4Y7N K;  1Y1V K;  4G0V A;  5IYB C;  5JFE A;  3GTK C;  1WQF A;  3PO2 K;  2VUM A;  3HOU K;  3S0X A;  1BS2 A;  3GTK K;  1YNN A;  2WAQ D;  1WCM A;  1G51 A;  1EK8 A;  1F7U A;  4LR2 A;  3GTJ A;  3H3V L;  3LPX A;  2JH3 A;  5IOT A;  4GTL A;  2V6T A;  1XXB A;  4C3J C;  1O24 A;  2ZUF A;  2B63 A;  3S14 K;  1VRQ C;  4C3I C;  1J6X A;  4P5A A;  1ZYR A;  4FM9 A;  4G0U A;  2PPB A;  1YNJ A;  5L46 A;  5C4X K;  5IOQ A;  4A93 C;  4A3I K;  4U67 S;  2VUM C;  3T00 A;  4A3J C;  1BJT A;  2GSU A;  3V4G A;  2V6S A;  3GTJ K;  4O2D A;  4IO9 S;  3GTG C;  3GTO A;  2JA6 A;  4A3E C;  2B63 K;  4XLP A;  3HOW K;  1WOR A;  1K83 C;  4PAA A;  4Q4Z A;  4BXX C;  3S17 C;  3LAJ A;  1VJE A;  2FQT A;  1I50 A;  2R93 A;  1O28 A;  1DCH A;  3HOX K;  4Y52 K;  4A3K C;  2JA8 K;  4MQ9 A;  4GTE A;  4Y52 C;  4KM9 A;  2A69 A;  5C44 K;  2KPU A;  3GTQ K;  1WSV A;  3H3V D;  1I6H K;  3S16 C;  2NVX C;  3PIO S;  3HOW C;  4GTA A;  3GTG K;  1SFO A;  2EBB A;  3AH5 A;  4XSX A;  2Y3P A;  4JK1 A;  2XCR B;  2KXY A;  1I50 K;  3EQL A;  1JVI A;  3M3Y K;  1O2B A;  1DCO A;  5M5X K;  1ZBS A;  1ZQ1 C;  2ZJQ S;  4A3K K;  2YU9 A;  2NVY C;  2FQO A;  4A93 K;  3FKI C;  2ZJR S;  4BBS K;  2O5I A;  2JA5 C;  3GTL A;  5EGH A;  3CAG A;  3RZO C;  1O26 A;  2PA8 D;  5JVG S;  1PJ6 A;  1TWA K;  1TWG K;  2PMZ L;  3GEH A;  3S1Q K;  1IBA A;  4C3H K;  2PHC B;  5C4J K;  1VGX A;  1C0A A;  1TWC A;  5D4D A;  2WB1 D;  3M3Y C;  1O25 A;  1EH1 A;  2KQ1 A;  4G7Z A;  1IE0 A;  5E68 A;  4A3I C;  4YFN A;  1WQG A;  1RU0 A;  3GTQ C;  1PJ7 A;  5M5W K;  5IYC C;  1EI6 A;  2NVX A;  3HKZ D;  1TWA A;  4LOW A;  1TWG A;  4XLN A;  3BUE A;  1WIH A;  4LK0 A;  3HOZ C;  1PJ5 A;  1KQ4 A;  1TWF K;  2B63 C;  4A3B C;  2Y0S L;  2D6F C;  2YU9 C;  2E2J K;  1BGW A;  2CW0 A;  2JA7 K;  3FOF A;  1I50 C;  4QJV A;  4ILD A;  1USM A;  3GTL C;  3PIP S;  2W7V A;  4AYB L;  2JA8 C;  1TWH C;  3FKI A;  2E2I K;  4Q5S A;  3GSI A;  3RZO K;  1AB4 A;  2E2H A;  3OPF A;  4G7O A;  3BP3 A;  3S15 K;  2JA5 K;  1Y1W C;  4P9S A;  4C45 A;  3S16 K;  3GDZ A;  3MML B;  3TFH A;  4A3L C;  3T02 A;  3DLL S;  3T01 A;  3HOV K;  2JA7 A;  3S1R C;  1L0W A;  4QJV B;  1WCM C;  3PO3 K;  3HOU C;  3FKI K;  2E2I A;  4BBR C;  1O2A A;  3TFJ A;  1Y1V C;  4KN4 A;  2NVT C;  2P8T A;  3GTJ C;  1J6V A;  1Y1W A;  3L4K A;  4X6A K;  2R93 C;  1TWC K;  3RZD C;  3GTM A;  1IQ0 A;  4KM8 A;  4A3G K;  3JST A;  3K7A K;  3H0G K;  4KMA A;  2ZUE A;  3S2H K;  5C4X C;  3CQZ K;  1F7V A;  2JA6 K;  5IOR A;  2GAH C;  4BY1 K;  1I3Q A;  1XXA A;  5FLM K;  2NVQ C;  4BBS C;  4P5B A;  2ZFZ A;  1Y1V A;  4WFA S;  4KAT A;  4NOI A;  4A3M C;  3S1N C;  4GFQ A;  3AQO A;  4BLB A;  1TWG C;  5IYC K;  1GE9 A;  3AD8 C;  4OIQ A;  3GEI A;  4WIL A;  1O2F B;  5CJ9 A;  3ORE A;  5JVO A;  1EQR A;  4OIR A;  3CQZ A;  1I3Q K;  1SFO K;  3GTP C;  4LJZ A;  3I4N C;  1XXC A;  3Q3Q A;  4MEY A;  4YFX A;  1I6V A;  4OIP A;  2WB1 L;  5IOS A;  1DCP A;  1JOE A;  1O27 A;  4KAR A;  3S1M K;  2PMZ D;  2CFA B;  2XCQ A;  3I4M C;  1TWH K;  2A68 A;  4C2M C;  4QIW D; 
#chains in the Genus database with same CATH homology
 2WAQ D;  5IYC C;  3HKZ D;  3M4O C;  2E2H K;  4A3G C;  4MEX A;  4XLN A;  3H3V L;  4LK0 A;  3S14 C;  1K83 K;  4XSZ A;  2E2J C;  1TWC C;  3HOZ C;  3CQZ C;  4C3J C;  2R93 K;  1TWF K;  2B63 C;  4A3B C;  2Y0S L;  1R9T K;  2YU9 C;  3S14 K;  1SMY A;  4C3I C;  2E2J K;  3HOZ K;  5IYD K;  3S17 K;  1ZYR A;  4YG2 A;  2CW0 A;  4A3B K;  2PPB A;  2JA7 K;  1YNJ A;  2NVY K;  4A3C C;  1I50 C;  5TMC A;  4A93 C;  5C4X K;  4BY7 C;  4QJV A;  4OIO A;  3GTL C;  4A3I K;  2VUM C;  4AYB L;  2PA8 L;  2JA8 C;  1TWH C;  1XPP A;  5IYB K;  2E2I K;  2R92 C;  4Q5S A;  4A3J C;  2O5J A;  3RZO K;  4A3F C;  5IP7 C;  3GTO C;  4G7O A;  4C2M K;  5M5Y K;  3GTJ K;  3S1Q C;  3S15 K;  2JA5 K;  1Y1W C;  3GTG C;  3S2D C;  3S1N K;  4A3D C;  3RZD K;  4C3J K;  4A3E C;  3S16 K;  2B63 K;  4XLP A;  3HOW K;  3HOV C;  1K83 C;  4A3L C;  3GTP K;  5IYD C;  4Q4Z A;  4BXX C;  3S17 C;  1BDF A;  2YU9 K;  3HOV K;  4C3I K;  3S1R C;  4BBR K;  3HOX K;  4QJV B;  1WCM C;  3PO3 K;  2JA7 C;  3GTL K;  4A3K C;  4Y52 K;  3PO2 C;  4KMU A;  4LK1 A;  5FLM C;  3HOU C;  4LLG A;  5FJ8 K;  4MQ9 A;  3FKI K;  5C3E K;  2JA8 K;  2NVQ K;  4BBR C;  3HOX C;  5C44 C;  4OIN A;  4Y52 C;  3PO3 C;  4GZY A;  4G7H A;  4A3J K;  1HQM A;  1Y1V C;  4KN4 A;  4KN7 A;  5TMF A;  2NVT C;  2E2I C;  2A69 A;  5C44 K;  2A6E A;  3GTJ C;  4A3M K;  3GTQ K;  3I4M K;  4X6A K;  5IP7 K;  3GTO K;  2WAQ L;  2R93 C;  1TWC K;  3H3V D;  3RZD C;  1I6H K;  4A3E K;  3S16 C;  2NVX C;  3HOW C;  4AYB D;  3GTG K;  2E2H C;  4A3D K;  3DXJ A;  1IW7 A;  5M3M K;  5M3F K;  4A3G K;  4XSX A;  1I6H C;  3K7A K;  3H0G K;  4BXX K;  4QIW L;  4JK1 A;  1SFO C;  3S2H K;  5C4X C;  1I50 K;  3CQZ K;  3EQL A;  3GTM C;  2JA6 K;  3H0G C;  3M3Y K;  4BY1 K;  1R9T C;  4Y7N C;  3HOY C;  2Y0S D;  5FLM K;  5M5X K;  5C3E C;  2NVQ C;  4BBS C;  4BY1 C;  1WCM K;  4ZH4 A;  4A3K K;  2NVY C;  4A3C K;  4A93 K;  3FKI C;  4BBS K;  2O5I A;  4NOI A;  2JA5 C;  4A3M C;  2VUM K;  3S1N C;  1Y1W K;  3S2D K;  3M4O K;  2NVT K;  1TWA C;  1TWG C;  5IP9 C;  5IYC K;  2NVX K;  3RZO C;  4C3H C;  4A3F K;  4OIQ A;  4X6A C;  2PA8 D;  1TWA K;  1TWG K;  5IP9 K;  3K7A C;  3S15 C;  2PMZ L;  3S1Q K;  4C3H K;  5C4J K;  3WOD A;  4BY7 K;  4OIR A;  3I4N K;  1TWF C;  2WB1 D;  5D4D A;  4YFK A;  2JA6 C;  3M3Y C;  3GTM K;  1I3Q K;  2A6H A;  5C4J C;  3S2H C;  1SFO K;  3GTP C;  4LJZ A;  3I4N C;  4A3L K;  4MEY A;  4YFX A;  2R7Z C;  1I6V A;  1I3Q C;  4OIP A;  4G7Z A;  2BE5 A;  4A3I C;  3S1M C;  2WB1 L;  1YNN A;  4Y7N K;  1Y1V K;  4YFN A;  3S1R K;  3HOY K;  5IYB C;  3GTK C;  2R7Z K;  3S1M K;  2PMZ D;  3PO2 K;  3GTQ C;  3I4M C;  3HOU K;  1TWH K;  5M5W K;  2A68 A;  3HKZ L;  4C2M C;  3GTK K;  2R92 K;  4QIW D; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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