3S1RC

Rna polymerase ii initiation complex with a 5-nt 3'-deoxy rna soaked with gtp
Total Genus 56
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
56
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Initiation complex structure and promoter proofreading.
pubmed doi rcsb
molecule tags Transcription/rna/dna
total genus 56
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-05-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3s1rC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3s1rC01
3GTGC 4QJVA 2E2HC 2PA8D 2PPBA 2WAQL 4C2MC 5TMCA 4A3LK 2PMZD 3HOZC 5C3EK 2NVXK 3GTQK 4BXXK 3HKZD 4A3MC 4MEXA 1YNNA 4XSXA 4BBRK 1Y1WK 3HOYK 5M5YK 1SFOK 4A3IC 1TWHC 1TWCK 2VUMC 1Y1WC 4A93C 1WCMK 3PO3K 3PO2K 2JA8K 4YFNA 5C4XC 3S2DK 3S1NK 3HOWK 4X6AC 1I50C 1TWCC 4OIOA 1TWGK 3S15K 3S2HK 2A68A 3CQZC 1WCMC 2NVTC 3PO3C 2JA8C 3H0GC 4A3EC 4AYBD 3S2DC 4BY7K 5IP7K 4G7HA 1I3QK 2R7ZK 4QIWL 3I4NK 2R92C 1I6HC 1HQMA 4A3FK 3S1QK 4LK0A 1TWAC 2YU9C 3H3VD 4BBSC 3GTMK 4C3IK 3HOUK 4A3JC 3I4NC 4KN7A 2Y0SD 3GTJC 3S17C 5IYCK 4C3HK 4Q5SA 3HOVK 2PA8L 1YNJA 3GTOK 4A3BK 5FJ8K 2BE5A 2PMZL 4JK1A 1K83K 4A3LC 5C3EC 3EQLA 2NVXC 3GTQC 1TWFK 4BY1K 2R93K 3GTOC 1R9TK 3WODA 4BBRC 3M3YK 3HOYC 1K83C 1SFOC 2B63K 2A69A 4BY1C 1R9TC 1I6VA 3RZOK 4LLGA 4Y7NK 2WAQD 3PO2C 4YG2A 1BDFA 1Y1VK 2NVYK 3K7AK 3GTKK 3S1RK 2CW0A 3S1NC 4LK1A 3HOWC 4C3JK 3S2HC 1TWGC 4OIQA 3S15C 4A3DK 5M5WK 3S1MK 4AYBL 3GTLK 3DXJA 3GTPK 4BY7C 5IP7C 4G7OA 1I3QC 2R7ZC 4MEYA 5IP9K 3S16K 4A3FC 2JA6K 3S14K 3S1QC 3H3VL 2WB1D 5C44K 3I4MK 3HOUC 3GTMC 4C3IC 5IYDK 5FLMK 3HOXK 5M5XK 2JA7K 5IYCC 3HKZL 4C3HC 5IYBK 3RZDK 4LJZA 3HOVC 4A3CK 3I4MC 4A3BC 4A3GK 2NVQK 4YFKA 2A6HA 5C4JK 5FLMC 2JA7C 3FKIK 1TWFC 2R93C 4GZYA 4Y52K 5M3MK 2A6EA 3GTGK 4OIPA 4XLNA 2E2HK 2NVQC 2E2JK 3M3YC 4C2MK 4YFXA 5TMFA 2B63C 3M4OK 4NOIA 4Y52C 4MQ9A 4A3MK 2E2JC 3RZOC 4Y7NC 4Q4ZA 3K7AC 4BXXC 1Y1VC 2NVYC 3GTKC 3M4OC 1ZYRA 4KMUA 3S1RC 1TWHK 4A3IK 4C3JC 2VUMK 2O5JA 4ZH4A 4A93K 4A3DC 3S1MC 3GTLC 1XPPA 5C4XK 1SMYA 3GTPC 4X6AK 1I50K 2Y0SL 3S16C 5IP9C 3CQZK 2JA6C 2NVTK 3S14C 3H0GK 4A3EK 4A3KK 2WB1L 2E2IK 4G7ZA 5C44C 2R92K 5D4DA 5IYDC 1I6HK 1IW7A 4QIWD 4OIRA 2JA5K 3HOXC 4A3KC 4OINA 1TWAK 5IYBC 2YU9K 3RZDC 4XSZA 2E2IC 4BBSK 4KN4A 4A3CC 5M3FK 4A3GC 4A3JK 3GTJK 2JA5C 5C4JC 3S17K 4XLPA 4QJVB 3HOZK 3FKIC 2O5IA
chains in the Genus database with same CATH superfamily
2PPBA 4GFQA 1EFWA 4KB4A 4LR2A 1XXAA 1JOEA 3HOZC 1ZXOA 5JVGS 2JA5A 2YU9A 4DDQA 1SFOK 3L4JA 2V6UA 4A3IC 3PO2K 3S1NK 1PJ5A 4X6AC 3S2HK 4OIOA 3S15K 1L0WA 3SZYA 1WCMC 2JH3A 3H0GC 4A3EC 4AYBD 2ZFZA 4QIWL 1I6HC 4A3FK 1I50A 4LK0A 1TWAC 4BBSC 3HOUK 3S17C 5IYCK 3HOVK 2Y3PA 1YNJA 3GTOK 4A3BK 2PHCB 4M1XA 2NVXC 1TWFK 1IQ0A 2R93K 3LAJA 1IBAA 3JSTA 3M3YK 1BJTA 4ILDA 1R9TC 1DCOA 3RZOK 4Y7NK 3GTOA 2WAQD 1ISEA 4WFNS 3TFIA 3GTKK 2CW0A 4LK1A 3OEPA 4OIQA 4A3DK 3GTLK 4G7OA 5IP7C 1I3QC 2R7ZC 4AH6A 2JA6K 3S14K 3S1QC 4P9SA 3H3VL 5HL7S 4IO9S 5FLMK 5IYBK 4C3HC 2L3UA 1USMA 3GTLA 4A3CK 5HL8A 1DCHA 2NVQK 3PIPS 3AD8C 4GZYA 1J6WA 4OIPA 4XLNA 1EH1A 2E2JK 4WILA 5CHPA 4MQ9A 1IS1A 4BXXC 1Y1VC 3M4OC 4A3IK 4KMUA 2B63A 1XZPA 3T02A 3L4KA 1YX2A 3N0CA 3T00A 4X6AK 1IL2A 3H0GK 4A3EK 4A3KK 2WB1L 4BKWA 1PJ6A 4G7ZA 4GTLA 5IYDC 1I6HK 4QIWD 4P5BA 3HOXC 4OINA 1TWAK 4BBSK 1WQFA 4A3GC 3S17K 2ZJQS 4QJVB 3CAGA 3FKIC 3GTGC 2WAQL 3G4CA 4C2MC 2NVXK 3GEEA 3OREA 4KARA 4A3MC 4MEXA 1Y1WK 2E2HA 2KPUA 2ZUFA 2VUMC 5IOTA 1O2AA 4A93C 2JA8K 5C4XC 1TWCC 5HQHA 3LPXA 1TWHA 3PO3C 1Y1WA 3QX3A 3S2DC 3Q3QA 5IP7K 4G7HA 1I3QK 2R7ZK 3I4NK 1HQMA 3S1QK 3CQZA 3H3VD 1RU0A 3GTJC 4G0VA 4C3HK 4Q5SA 1PJ7A 5FJ8K 4JK1A 3PIOS 4BY1K 3GTQC 4O2DA 2W7VA 3GSIA 3AQPA 2KWAA 4KAWX 4BBRC 2L5NA 1K83C 2A69A 1B4BA 1WOPA 1I6VA 4LLGA 4BXXK 4YG2A 1BDFA 1Y1VK 1F7UA 1SFOA 3HOWC 4KASA 3TFJA 4KMHA 4BY7C 2V6SA 1J6XA 3G4AA 4MEYA 5IORA 2WB1D 3I4MK 3GTMC 5IYDK 3HOXK 5EGHA 4A3GK 1V5VA 1O26A 2ZUEA 5JFEA 2JA7C 3FKIK 1AB4A 1DCPA 1USOA 3GTGK 3V4GA 4C2MK 2GAHC 2EBBA 4NOIA 4Y52C 3AQOA 4A3MK 2FQOA 1XZQA 1TWFA 2R93A 1X31C 4Q4ZA 1BGWA 2GAGC 3BP8C 2VUMK 4A93K 3GEIA 1XPPA 5C4XK 1F7VA 1WOOA 1DD5A 3GTPC 3GTKA 3S16C 2E2IK 3N3YA 4FM9A 3RZDC 2GSOA 2JA6A 1ZBSA 4KN4A 3LYWA 3GTJK 2JA5C 5C4JC 4XLPA 1XZQB 3HOZK 2O5IA 1O28A 4QJVA 1UV7A 3ERED 4WJ4A 2E2IA 5DM7S 5TMCA 5DM6S 3A8IA 1WIHA 3GTQK 3HKZD 3T01A 4XSXA 4BBRK 1O2FB 2KXYA 1XXBA 1KQ4A 4GTCA 1WCMK 3MMLB 3HOWK 4KDDA 1I50C 1WQGA 4P5AA 4RMFA 1O27A 3GDZA 4BY7K 4KMDA 1ZVUA 2R92C 5L46A 2XCOA 2ZJPS 1WCMA 3H0GA 3GTMK 4A3JC 2Y0SD 4WF9S 5IOQA 1O29A 1O25A 2PA8L 1TWAA 3FHZA 2PMZL 4A3LC 5C3EC 1VGXA 2P5MA 3FOEA 3GTOC 1R9TK 3HOYC 4GTFA 2NVXA 1G51A 1TWGC 5M5WK 1R9TA 3AD7C 3DXJA 3GTPK 3AH5A 3S16K 5CJ9A 4LOWA 1ZQ1C 4C3IC 1VLOA 1I3QA 2XCRB 2R7ZA 3HKZL 5IOSA 3RZDK 4LJZA 3AD9C 3FOFA 4KM8A 4YFKA 1EI6A 5C4JK 5FLMC 4U67S 1J98A 3S0XA 2NVQC 4FZBA 4YFXA 5TMFA 2B63C 3M4OK 4WCES 4KMAA 2E2JC 2GSUA 3K7AC 2NVYC 4XCHA 3TTGA 3CF5S 3S1RC 4C3JC 3HXAA 2O5JA 3S1MC 5TJ3A 2CFAB 4J3NA 1I50K 2KQ1A 2Y0SL 1Y1VA 4BLAA 1IE0A 5IP9C 1O2BA 4WJ3M 1JVIA 1EK8A 5C44C 2XCQA 2R92K 1EQRA 1IW7A 4OIRA 3GIRA 4A3KC 1BS2A 2FQTA 4GTEA 1HI9A 4A3JK 2GSNA 4GTAA 2E2HC 2PA8D 3NUHA 4A3LK 2R92A 2PMZD 5C3EK 1B4AA 3A8JA 3FKIA 1YNNA 1WORA 3HOYK 3GTGA 5E68A 2RGRA 2P8TA 1TWHC 3VA7A 1TWCK 4KATA 1Y1WC 3PO3K 4YFNA 4IOAS 3S2DK 1TWGK 3N0BA 2A68A 3CQZC 2NVTC 3IPJA 2JA8C 2VUMA 3OPFA 1YCLA 3SZZA 1INNA 1TWCA 1F9NA 4GTBA 2YU9C 4PABA 1FEUA 4C3IK 3I4NC 5EGEA 4KN7A 4WFAS 1TWGA 3A8KA 1XXCA 2BE5A 1GE9A 1K83K 2V6TA 2ZJRS 3EQLA 3GTJA 1O24A 3WODA 4WFBS 1SFOC 2B63K 3DLLS 4BY1C 3TFHA 1WOSA 1VRQC 3GTQA 3PO2C 3K7AK 2NVYK 1WSRA 1WSVA 3S1RK 3S1NC 1K83A 4KC6A 4C3JK 3S2HC 3S15C 3S1MK 4AYBL 3BP3A 2RH6A 5IP9K 4A3FC 4C45A 2D6FC 4KB2A 1JQWA 5C44K 3HOUC 4IOCS 2NVYA 4GT9A 5M5XK 2JA7K 5IYCC 4LQYA 3HOVC 3I4MC 4A3BC 2A6HA 4G0WA 3GTMA 1TWFC 2R93C 4Y52K 5M3MK 2A6EA 2E2HK 3M3YC 4BLBA 2JA7A 3ADAC 3RZOC 4Y7NC 1XZPB 3GTKC 1ZYRA 1TWHK 4PAAA 4ZH4A 4A3DC 3GTLC 4G0UA 5JVHS 5JVOA 1SMYA 1WQHA 1F93A 2CFAA 3GEHA 2NVTK 1VJEA 2JA6C 3CQZK 3S14C 3BUEA 5D4DA 1J6VA 1VH2A 3GTPA 2JA5K 4KM9A 5IYBC 2YU9K 3LAPA 4XSZA 2E2IC 4A3CC 5M3FK 1C0AA 5M5YK 4GTDA
chains in the Genus database with same CATH topology
3GTGC 4QJVA 2E2HC 2PA8D 2PPBA 2WAQL 4C2MC 5TMCA 4A3LK 2PMZD 3HOZC 5C3EK 2NVXK 3GTQK 4BXXK 3HKZD 4A3MC 4MEXA 1YNNA 4XSXA 4BBRK 1Y1WK 3HOYK 5M5YK 1SFOK 4A3IC 1TWHC 1TWCK 2VUMC 1Y1WC 4A93C 1WCMK 3PO3K 3PO2K 2JA8K 4YFNA 5C4XC 3S2DK 3S1NK 3HOWK 4X6AC 1I50C 1TWCC 4OIOA 1TWGK 3S15K 3S2HK 2A68A 3CQZC 1WCMC 2NVTC 3PO3C 2JA8C 3H0GC 4A3EC 4AYBD 3S2DC 4BY7K 5IP7K 4G7HA 1I3QK 2R7ZK 4QIWL 3I4NK 2R92C 1I6HC 1HQMA 4A3FK 3S1QK 4LK0A 1TWAC 2YU9C 3H3VD 4BBSC 3GTMK 4C3IK 3HOUK 4A3JC 3I4NC 4KN7A 2Y0SD 3GTJC 3S17C 5IYCK 4C3HK 4Q5SA 3HOVK 2PA8L 1YNJA 3GTOK 4A3BK 5FJ8K 2BE5A 2PMZL 4JK1A 1K83K 4A3LC 5C3EC 3EQLA 2NVXC 3GTQC 1TWFK 4BY1K 2R93K 3GTOC 1R9TK 3WODA 4BBRC 3M3YK 3HOYC 1K83C 1SFOC 2B63K 2A69A 4BY1C 1R9TC 1I6VA 3RZOK 4LLGA 4Y7NK 2WAQD 3PO2C 4YG2A 1BDFA 1Y1VK 2NVYK 3K7AK 3GTKK 3S1RK 2CW0A 3S1NC 4LK1A 3HOWC 4C3JK 3S2HC 1TWGC 4OIQA 3S15C 4A3DK 5M5WK 3S1MK 4AYBL 3GTLK 3DXJA 3GTPK 4BY7C 5IP7C 4G7OA 1I3QC 2R7ZC 4MEYA 5IP9K 3S16K 4A3FC 2JA6K 3S14K 3S1QC 3H3VL 2WB1D 5C44K 3I4MK 3HOUC 3GTMC 4C3IC 5IYDK 5FLMK 3HOXK 5M5XK 2JA7K 5IYCC 3HKZL 4C3HC 5IYBK 3RZDK 4LJZA 3HOVC 4A3CK 3I4MC 4A3BC 4A3GK 2NVQK 4YFKA 2A6HA 5C4JK 5FLMC 2JA7C 3FKIK 1TWFC 2R93C 4GZYA 4Y52K 5M3MK 2A6EA 3GTGK 4OIPA 4XLNA 2E2HK 2NVQC 2E2JK 3M3YC 4C2MK 4YFXA 5TMFA 2B63C 3M4OK 4NOIA 4Y52C 4MQ9A 4A3MK 2E2JC 3RZOC 4Y7NC 4Q4ZA 3K7AC 4BXXC 1Y1VC 2NVYC 3GTKC 3M4OC 1ZYRA 4KMUA 3S1RC 1TWHK 4A3IK 4C3JC 2VUMK 2O5JA 4ZH4A 4A93K 4A3DC 3S1MC 3GTLC 1XPPA 5C4XK 1SMYA 3GTPC 4X6AK 1I50K 2Y0SL 3S16C 5IP9C 3CQZK 2JA6C 2NVTK 3S14C 3H0GK 4A3EK 4A3KK 2WB1L 2E2IK 4G7ZA 5C44C 2R92K 5D4DA 5IYDC 1I6HK 1IW7A 4QIWD 4OIRA 2JA5K 3HOXC 4A3KC 4OINA 1TWAK 5IYBC 2YU9K 3RZDC 4XSZA 2E2IC 4BBSK 4KN4A 4A3CC 5M3FK 4A3GC 4A3JK 3GTJK 2JA5C 5C4JC 3S17K 4XLPA 4QJVB 3HOZK 3FKIC 2O5IA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3GTG C;  4QJV A;  2E2H C;  2PA8 D;  2PPB A;  2WAQ L;  4C2M C;  5TMC A;  4A3L K;  2PMZ D;  3HOZ C;  5C3E K;  2NVX K;  3GTQ K;  4BXX K;  3HKZ D;  4A3M C;  4MEX A;  1YNN A;  4XSX A;  4BBR K;  1Y1W K;  3HOY K;  5M5Y K;  1SFO K;  4A3I C;  1TWH C;  1TWC K;  2VUM C;  1Y1W C;  4A93 C;  1WCM K;  3PO3 K;  3PO2 K;  2JA8 K;  4YFN A;  5C4X C;  3S2D K;  3S1N K;  3HOW K;  4X6A C;  1I50 C;  1TWC C;  4OIO A;  1TWG K;  3S15 K;  3S2H K;  2A68 A;  3CQZ C;  1WCM C;  2NVT C;  3PO3 C;  2JA8 C;  3H0G C;  4A3E C;  4AYB D;  3S2D C;  4BY7 K;  5IP7 K;  4G7H A;  1I3Q K;  2R7Z K;  4QIW L;  3I4N K;  2R92 C;  1I6H C;  1HQM A;  4A3F K;  3S1Q K;  4LK0 A;  1TWA C;  2YU9 C;  3H3V D;  4BBS C;  3GTM K;  4C3I K;  3HOU K;  4A3J C;  3I4N C;  4KN7 A;  2Y0S D;  3GTJ C;  3S17 C;  5IYC K;  4C3H K;  4Q5S A;  3HOV K;  2PA8 L;  1YNJ A;  3GTO K;  4A3B K;  5FJ8 K;  2BE5 A;  2PMZ L;  4JK1 A;  1K83 K;  4A3L C;  5C3E C;  3EQL A;  2NVX C;  3GTQ C;  1TWF K;  4BY1 K;  2R93 K;  3GTO C;  1R9T K;  3WOD A;  4BBR C;  3M3Y K;  3HOY C;  1K83 C;  1SFO C;  2B63 K;  2A69 A;  4BY1 C;  1R9T C;  1I6V A;  3RZO K;  4LLG A;  4Y7N K;  2WAQ D;  3PO2 C;  4YG2 A;  1BDF A;  1Y1V K;  2NVY K;  3K7A K;  3GTK K;  3S1R K;  2CW0 A;  3S1N C;  4LK1 A;  3HOW C;  4C3J K;  3S2H C;  1TWG C;  4OIQ A;  3S15 C;  4A3D K;  5M5W K;  3S1M K;  4AYB L;  3GTL K;  3DXJ A;  3GTP K;  4BY7 C;  5IP7 C;  4G7O A;  1I3Q C;  2R7Z C;  4MEY A;  5IP9 K;  3S16 K;  4A3F C;  2JA6 K;  3S14 K;  3S1Q C;  3H3V L;  2WB1 D;  5C44 K;  3I4M K;  3HOU C;  3GTM C;  4C3I C;  5IYD K;  5FLM K;  3HOX K;  5M5X K;  2JA7 K;  5IYC C;  3HKZ L;  4C3H C;  5IYB K;  3RZD K;  4LJZ A;  3HOV C;  4A3C K;  3I4M C;  4A3B C;  4A3G K;  2NVQ K;  4YFK A;  2A6H A;  5C4J K;  5FLM C;  2JA7 C;  3FKI K;  1TWF C;  2R93 C;  4GZY A;  4Y52 K;  5M3M K;  2A6E A;  3GTG K;  4OIP A;  4XLN A;  2E2H K;  2NVQ C;  2E2J K;  3M3Y C;  4C2M K;  4YFX A;  5TMF A;  2B63 C;  3M4O K;  4NOI A;  4Y52 C;  4MQ9 A;  4A3M K;  2E2J C;  3RZO C;  4Y7N C;  4Q4Z A;  3K7A C;  4BXX C;  1Y1V C;  2NVY C;  3GTK C;  3M4O C;  1ZYR A;  4KMU A;  3S1R C;  1TWH K;  4A3I K;  4C3J C;  2VUM K;  2O5J A;  4ZH4 A;  4A93 K;  4A3D C;  3S1M C;  3GTL C;  1XPP A;  5C4X K;  1SMY A;  3GTP C;  4X6A K;  1I50 K;  2Y0S L;  3S16 C;  5IP9 C;  3CQZ K;  2JA6 C;  2NVT K;  3S14 C;  3H0G K;  4A3E K;  4A3K K;  2WB1 L;  2E2I K;  4G7Z A;  5C44 C;  2R92 K;  5D4D A;  5IYD C;  1I6H K;  1IW7 A;  4QIW D;  4OIR A;  2JA5 K;  3HOX C;  4A3K C;  4OIN A;  1TWA K;  5IYB C;  2YU9 K;  3RZD C;  4XSZ A;  2E2I C;  4BBS K;  4KN4 A;  4A3C C;  5M3F K;  4A3G C;  4A3J K;  3GTJ K;  2JA5 C;  5C4J C;  3S17 K;  4XLP A;  4QJV B;  3HOZ K;  3FKI C;  2O5I A; 
#chains in the Genus database with same CATH topology
 2PPB A;  4GFQ A;  1EFW A;  4KB4 A;  4LR2 A;  1XXA A;  1JOE A;  3HOZ C;  1ZXO A;  5JVG S;  2JA5 A;  2YU9 A;  4DDQ A;  1SFO K;  3L4J A;  2V6U A;  4A3I C;  3PO2 K;  3S1N K;  1PJ5 A;  4X6A C;  3S2H K;  4OIO A;  3S15 K;  1L0W A;  3SZY A;  1WCM C;  2JH3 A;  3H0G C;  4A3E C;  4AYB D;  2ZFZ A;  4QIW L;  1I6H C;  4A3F K;  1I50 A;  4LK0 A;  1TWA C;  4BBS C;  3HOU K;  3S17 C;  5IYC K;  3HOV K;  2Y3P A;  1YNJ A;  3GTO K;  4A3B K;  2PHC B;  4M1X A;  2NVX C;  1TWF K;  1IQ0 A;  2R93 K;  3LAJ A;  1IBA A;  3JST A;  3M3Y K;  1BJT A;  4ILD A;  1R9T C;  1DCO A;  3RZO K;  4Y7N K;  3GTO A;  2WAQ D;  1ISE A;  4WFN S;  3TFI A;  3GTK K;  2CW0 A;  4LK1 A;  3OEP A;  4OIQ A;  4A3D K;  3GTL K;  4G7O A;  5IP7 C;  1I3Q C;  2R7Z C;  4AH6 A;  2JA6 K;  3S14 K;  3S1Q C;  4P9S A;  3H3V L;  5HL7 S;  4IO9 S;  5FLM K;  5IYB K;  4C3H C;  2L3U A;  1USM A;  3GTL A;  4A3C K;  5HL8 A;  1DCH A;  2NVQ K;  3PIP S;  3AD8 C;  4GZY A;  1J6W A;  4OIP A;  4XLN A;  1EH1 A;  2E2J K;  4WIL A;  5CHP A;  4MQ9 A;  1IS1 A;  4BXX C;  1Y1V C;  3M4O C;  4A3I K;  4KMU A;  2B63 A;  1XZP A;  3T02 A;  3L4K A;  1YX2 A;  3N0C A;  3T00 A;  4X6A K;  1IL2 A;  3H0G K;  4A3E K;  4A3K K;  2WB1 L;  4BKW A;  1PJ6 A;  4G7Z A;  4GTL A;  5IYD C;  1I6H K;  4QIW D;  4P5B A;  3HOX C;  4OIN A;  1TWA K;  4BBS K;  1WQF A;  4A3G C;  3S17 K;  2ZJQ S;  4QJV B;  3CAG A;  3FKI C;  3GTG C;  2WAQ L;  3G4C A;  4C2M C;  2NVX K;  3GEE A;  3ORE A;  4KAR A;  4A3M C;  4MEX A;  1Y1W K;  2E2H A;  2KPU A;  2ZUF A;  2VUM C;  5IOT A;  1O2A A;  4A93 C;  2JA8 K;  5C4X C;  1TWC C;  5HQH A;  3LPX A;  1TWH A;  3PO3 C;  1Y1W A;  3QX3 A;  3S2D C;  3Q3Q A;  5IP7 K;  4G7H A;  1I3Q K;  2R7Z K;  3I4N K;  1HQM A;  3S1Q K;  3CQZ A;  3H3V D;  1RU0 A;  3GTJ C;  4G0V A;  4C3H K;  4Q5S A;  1PJ7 A;  5FJ8 K;  4JK1 A;  3PIO S;  4BY1 K;  3GTQ C;  4O2D A;  2W7V A;  3GSI A;  3AQP A;  2KWA A;  4KAW X;  4BBR C;  2L5N A;  1K83 C;  2A69 A;  1B4B A;  1WOP A;  1I6V A;  4LLG A;  4BXX K;  4YG2 A;  1BDF A;  1Y1V K;  1F7U A;  1SFO A;  3HOW C;  4KAS A;  3TFJ A;  4KMH A;  4BY7 C;  2V6S A;  1J6X A;  3G4A A;  4MEY A;  5IOR A;  2WB1 D;  3I4M K;  3GTM C;  5IYD K;  3HOX K;  5EGH A;  4A3G K;  1V5V A;  1O26 A;  2ZUE A;  5JFE A;  2JA7 C;  3FKI K;  1AB4 A;  1DCP A;  1USO A;  3GTG K;  3V4G A;  4C2M K;  2GAH C;  2EBB A;  4NOI A;  4Y52 C;  3AQO A;  4A3M K;  2FQO A;  1XZQ A;  1TWF A;  2R93 A;  1X31 C;  4Q4Z A;  1BGW A;  2GAG C;  3BP8 C;  2VUM K;  4A93 K;  3GEI A;  1XPP A;  5C4X K;  1F7V A;  1WOO A;  1DD5 A;  3GTP C;  3GTK A;  3S16 C;  2E2I K;  3N3Y A;  4FM9 A;  3RZD C;  2GSO A;  2JA6 A;  1ZBS A;  4KN4 A;  3LYW A;  3GTJ K;  2JA5 C;  5C4J C;  4XLP A;  1XZQ B;  3HOZ K;  2O5I A;  1O28 A;  4QJV A;  1UV7 A;  3ERE D;  4WJ4 A;  2E2I A;  5DM7 S;  5TMC A;  5DM6 S;  3A8I A;  1WIH A;  3GTQ K;  3HKZ D;  3T01 A;  4XSX A;  4BBR K;  1O2F B;  2KXY A;  1XXB A;  1KQ4 A;  4GTC A;  1WCM K;  3MML B;  3HOW K;  4KDD A;  1I50 C;  1WQG A;  4P5A A;  4RMF A;  1O27 A;  3GDZ A;  4BY7 K;  4KMD A;  1ZVU A;  2R92 C;  5L46 A;  2XCO A;  2ZJP S;  1WCM A;  3H0G A;  3GTM K;  4A3J C;  2Y0S D;  4WF9 S;  5IOQ A;  1O29 A;  1O25 A;  2PA8 L;  1TWA A;  3FHZ A;  2PMZ L;  4A3L C;  5C3E C;  1VGX A;  2P5M A;  3FOE A;  3GTO C;  1R9T K;  3HOY C;  4GTF A;  2NVX A;  1G51 A;  1TWG C;  5M5W K;  1R9T A;  3AD7 C;  3DXJ A;  3GTP K;  3AH5 A;  3S16 K;  5CJ9 A;  4LOW A;  1ZQ1 C;  4C3I C;  1VLO A;  1I3Q A;  2XCR B;  2R7Z A;  3HKZ L;  5IOS A;  3RZD K;  4LJZ A;  3AD9 C;  3FOF A;  4KM8 A;  4YFK A;  1EI6 A;  5C4J K;  5FLM C;  4U67 S;  1J98 A;  3S0X A;  2NVQ C;  4FZB A;  4YFX A;  5TMF A;  2B63 C;  3M4O K;  4WCE S;  4KMA A;  2E2J C;  2GSU A;  3K7A C;  2NVY C;  4XCH A;  3TTG A;  3CF5 S;  3S1R C;  4C3J C;  3HXA A;  2O5J A;  3S1M C;  5TJ3 A;  2CFA B;  4J3N A;  1I50 K;  2KQ1 A;  2Y0S L;  1Y1V A;  4BLA A;  1IE0 A;  5IP9 C;  1O2B A;  4WJ3 M;  1JVI A;  1EK8 A;  5C44 C;  2XCQ A;  2R92 K;  1EQR A;  1IW7 A;  4OIR A;  3GIR A;  4A3K C;  1BS2 A;  2FQT A;  4GTE A;  1HI9 A;  4A3J K;  2GSN A;  4GTA A;  2E2H C;  2PA8 D;  3NUH A;  4A3L K;  2R92 A;  2PMZ D;  5C3E K;  1B4A A;  3A8J A;  3FKI A;  1YNN A;  1WOR A;  3HOY K;  3GTG A;  5E68 A;  2RGR A;  2P8T A;  1TWH C;  3VA7 A;  1TWC K;  4KAT A;  1Y1W C;  3PO3 K;  4YFN A;  4IOA S;  3S2D K;  1TWG K;  3N0B A;  2A68 A;  3CQZ C;  2NVT C;  3IPJ A;  2JA8 C;  2VUM A;  3OPF A;  1YCL A;  3SZZ A;  1INN A;  1TWC A;  1F9N A;  4GTB A;  2YU9 C;  4PAB A;  1FEU A;  4C3I K;  3I4N C;  5EGE A;  4KN7 A;  4WFA S;  1TWG A;  3A8K A;  1XXC A;  2BE5 A;  1GE9 A;  1K83 K;  2V6T A;  2ZJR S;  3EQL A;  3GTJ A;  1O24 A;  3WOD A;  4WFB S;  1SFO C;  2B63 K;  3DLL S;  4BY1 C;  3TFH A;  1WOS A;  1VRQ C;  3GTQ A;  3PO2 C;  3K7A K;  2NVY K;  1WSR A;  1WSV A;  3S1R K;  3S1N C;  1K83 A;  4KC6 A;  4C3J K;  3S2H C;  3S15 C;  3S1M K;  4AYB L;  3BP3 A;  2RH6 A;  5IP9 K;  4A3F C;  4C45 A;  2D6F C;  4KB2 A;  1JQW A;  5C44 K;  3HOU C;  4IOC S;  2NVY A;  4GT9 A;  5M5X K;  2JA7 K;  5IYC C;  4LQY A;  3HOV C;  3I4M C;  4A3B C;  2A6H A;  4G0W A;  3GTM A;  1TWF C;  2R93 C;  4Y52 K;  5M3M K;  2A6E A;  2E2H K;  3M3Y C;  4BLB A;  2JA7 A;  3ADA C;  3RZO C;  4Y7N C;  1XZP B;  3GTK C;  1ZYR A;  1TWH K;  4PAA A;  4ZH4 A;  4A3D C;  3GTL C;  4G0U A;  5JVH S;  5JVO A;  1SMY A;  1WQH A;  1F93 A;  2CFA A;  3GEH A;  2NVT K;  1VJE A;  2JA6 C;  3CQZ K;  3S14 C;  3BUE A;  5D4D A;  1J6V A;  1VH2 A;  3GTP A;  2JA5 K;  4KM9 A;  5IYB C;  2YU9 K;  3LAP A;  4XSZ A;  2E2I C;  4A3C C;  5M3F K;  1C0A A;  5M5Y K;  4GTD A; 
#chains in the Genus database with same CATH homology
 3GTG C;  4QJV A;  2E2H C;  2PA8 D;  2PPB A;  2WAQ L;  4C2M C;  5TMC A;  4A3L K;  2PMZ D;  3HOZ C;  5C3E K;  2NVX K;  3GTQ K;  4BXX K;  3HKZ D;  4A3M C;  4MEX A;  1YNN A;  4XSX A;  4BBR K;  1Y1W K;  3HOY K;  5M5Y K;  1SFO K;  4A3I C;  1TWH C;  1TWC K;  2VUM C;  1Y1W C;  4A93 C;  1WCM K;  3PO3 K;  3PO2 K;  2JA8 K;  4YFN A;  5C4X C;  3S2D K;  3S1N K;  3HOW K;  4X6A C;  1I50 C;  1TWC C;  4OIO A;  1TWG K;  3S15 K;  3S2H K;  2A68 A;  3CQZ C;  1WCM C;  2NVT C;  3PO3 C;  2JA8 C;  3H0G C;  4A3E C;  4AYB D;  3S2D C;  4BY7 K;  5IP7 K;  4G7H A;  1I3Q K;  2R7Z K;  4QIW L;  3I4N K;  2R92 C;  1I6H C;  1HQM A;  4A3F K;  3S1Q K;  4LK0 A;  1TWA C;  2YU9 C;  3H3V D;  4BBS C;  3GTM K;  4C3I K;  3HOU K;  4A3J C;  3I4N C;  4KN7 A;  2Y0S D;  3GTJ C;  3S17 C;  5IYC K;  4C3H K;  4Q5S A;  3HOV K;  2PA8 L;  1YNJ A;  3GTO K;  4A3B K;  5FJ8 K;  2BE5 A;  2PMZ L;  4JK1 A;  1K83 K;  4A3L C;  5C3E C;  3EQL A;  2NVX C;  3GTQ C;  1TWF K;  4BY1 K;  2R93 K;  3GTO C;  1R9T K;  3WOD A;  4BBR C;  3M3Y K;  3HOY C;  1K83 C;  1SFO C;  2B63 K;  2A69 A;  4BY1 C;  1R9T C;  1I6V A;  3RZO K;  4LLG A;  4Y7N K;  2WAQ D;  3PO2 C;  4YG2 A;  1BDF A;  1Y1V K;  2NVY K;  3K7A K;  3GTK K;  3S1R K;  2CW0 A;  3S1N C;  4LK1 A;  3HOW C;  4C3J K;  3S2H C;  1TWG C;  4OIQ A;  3S15 C;  4A3D K;  5M5W K;  3S1M K;  4AYB L;  3GTL K;  3DXJ A;  3GTP K;  4BY7 C;  5IP7 C;  4G7O A;  1I3Q C;  2R7Z C;  4MEY A;  5IP9 K;  3S16 K;  4A3F C;  2JA6 K;  3S14 K;  3S1Q C;  3H3V L;  2WB1 D;  5C44 K;  3I4M K;  3HOU C;  3GTM C;  4C3I C;  5IYD K;  5FLM K;  3HOX K;  5M5X K;  2JA7 K;  5IYC C;  3HKZ L;  4C3H C;  5IYB K;  3RZD K;  4LJZ A;  3HOV C;  4A3C K;  3I4M C;  4A3B C;  4A3G K;  2NVQ K;  4YFK A;  2A6H A;  5C4J K;  5FLM C;  2JA7 C;  3FKI K;  1TWF C;  2R93 C;  4GZY A;  4Y52 K;  5M3M K;  2A6E A;  3GTG K;  4OIP A;  4XLN A;  2E2H K;  2NVQ C;  2E2J K;  3M3Y C;  4C2M K;  4YFX A;  5TMF A;  2B63 C;  3M4O K;  4NOI A;  4Y52 C;  4MQ9 A;  4A3M K;  2E2J C;  3RZO C;  4Y7N C;  4Q4Z A;  3K7A C;  4BXX C;  1Y1V C;  2NVY C;  3GTK C;  3M4O C;  1ZYR A;  4KMU A;  3S1R C;  1TWH K;  4A3I K;  4C3J C;  2VUM K;  2O5J A;  4ZH4 A;  4A93 K;  4A3D C;  3S1M C;  3GTL C;  1XPP A;  5C4X K;  1SMY A;  3GTP C;  4X6A K;  1I50 K;  2Y0S L;  3S16 C;  5IP9 C;  3CQZ K;  2JA6 C;  2NVT K;  3S14 C;  3H0G K;  4A3E K;  4A3K K;  2WB1 L;  2E2I K;  4G7Z A;  5C44 C;  2R92 K;  5D4D A;  5IYD C;  1I6H K;  1IW7 A;  4QIW D;  4OIR A;  2JA5 K;  3HOX C;  4A3K C;  4OIN A;  1TWA K;  5IYB C;  2YU9 K;  3RZD C;  4XSZ A;  2E2I C;  4BBS K;  4KN4 A;  4A3C C;  5M3F K;  4A3G C;  4A3J K;  3GTJ K;  2JA5 C;  5C4J C;  3S17 K;  4XLP A;  4QJV B;  3HOZ K;  3FKI C;  2O5I A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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