3S1RC

Rna polymerase ii initiation complex with a 5-nt 3'-deoxy rna soaked with gtp
Total Genus 56
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
56
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transcription/rna/dna
molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Initiation complex structure and promoter proofreading.
pubmed doi rcsb
total genus 56
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-05-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3s1rC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3s1rC01
4A3JC 2R92C 3S17K 1Y1WC 5M5XK 2R93C 2CW0A 3CQZC 5C4JK 4A3EC 5IP9K 3PO3C 4YG2A 2PMZL 2B63C 4QJVB 3S2HC 4C3HK 2R7ZC 4Y7NC 1WCMK 4OIPA 3K7AC 3HOWK 3M3YK 3HOYC 3HOZK 3S1RC 1I6HK 2JA8C 4GZYA 3DXJA 4KN4A 2YU9C 4C3IC 2O5IA 3FKIK 4BBRK 5M5YK 4A3FK 3RZDK 2JA5C 3HOVK 4A3CK 5IYCC 2E2JC 3S16C 4G7ZA 2NVQK 3S2DK 4A3EK 4A3BK 3PO3K 3M4OK 2E2IC 4LK0A 4MQ9A 2B63K 5C3EK 3H3VL 4XSZA 4Y52C 5IP7K 2BE5A 5FLMC 1TWFK 3S15K 3S17C 4JK1A 5TMCA 3WODA 4A93K 5IP9C 1IW7A 1I50K 4C3HC 1TWHK 1WCMC 3M3YC 3HOWC 4C3JK 3HOZC 1I6HC 3HOXC 3GTLK 5IYDK 3RZDC 2PMZD 4BBRC 3I4MK 3FKIC 4A3FC 1SFOC 4G7OA 3HOVC 5FJ8K 4A3KK 4A3CC 2NVQC 3S2DC 1TWAK 4A3BC 3I4NC 2JA6K 3M4OC 5C4XK 1TWGK 4A3GK 5C3EC 5IP7C 4XSXA 3HOXK 4BY7K 1TWFC 2WAQL 1SFOK 4MEYA 4KN7A 3S15C 3H3VD 2JA7K 3RZOC 4OIQA 3I4NK 4LLGA 4A3LK 1I50C 1I6VA 2Y0SL 1TWHC 3GTQK 3PO2K 4C3JC 1ZYRA 4A3IK 3GTLC 5IYDC 4BY7C 4A93C 3I4MC 3H0GK 4A3KC 3RZOK 3S1NK 4AYBL 1TWAC 2A6HA 2JA6C 2A68A 5C4XC 4QIWL 1TWGC 4OINA 4Q5SA 4A3GC 1Y1VK 4BY1K 1YNJA 3HOUC 4G7HA 4NOIA 4OIRA 1XPPA 4MEXA 2NVYK 3GTPK 3S14K 2JA7C 2PA8L 4LK1A 2WB1L 2WAQD 3GTMK 4A3LC 5IYBK 3GTQC 3PO2C 4LJZA 4XLPA 2PPBA 5FLMK 3HOUK 4A3IC 4BBSK 3H0GC 2A6EA 3S1NC 2Y0SD 1BDFA 4YFNA 1HQMA 4A3MK 1YNNA 4C2MK 2NVXK 4YFXA 4OIOA 1I3QK 4ZH4A 5TMFA 3GTJC 1Y1VC 4BY1C 1TWCK 4AYBD 2E2HK 3GTGK 4BXXK 4QIWD 2NVYC 3GTPC 3S14C 4X6AK 4YFKA 3GTKK 3S1QK 3S1MC 2VUMK 3GTMC 5M5WK 3GTJK 5IYBC 3GTOK 2PA8D 2NVTC 5M3FK 1K83K 2WB1D 5C44C 1R9TK 4BBSC 4KMUA 4A3JK 4A3DK 4Q4ZA 2R92K 3HKZD 4A3MC 1Y1WK 3S1MK 2R93K 4C2MC 2NVXC 3CQZK 1I3QC 1TWCC 3GTGC 3EQLA 3HKZL 2E2HC 2NVTK 4BXXC 2R7ZK 5C44K 4Y7NK 3S2HK 3K7AK 5D4DA 3HOYK 3S1RK 2JA8K 4X6AC 5M3MK 2YU9K 4C3IK 3GTKC 3S1QC 2JA5K 4QJVA 5IYCK 2VUMC 2E2JK 5C4JC 4XLNA 3S16K 3GTOC 1SMYA 2E2IK 1K83C 4Y52K 1R9TC 2A69A 2O5JA 4A3DC
chains in the Genus database with same CATH superfamily
4P9SA 4BLAA 5M5XK 2PMZL 3S2HC 4Y7NC 4GFQA 3K7AC 1JVIA 1VH2A 1TWGA 4BBRK 3HOVK 4KB4A 5IYCC 2E2JC 3S16C 2NVQK 1G51A 2B63K 4GT9A 4KMAA 2JA7A 5C3EK 2GSNA 3H3VL 3TFJA 5FLMC 3S15K 5TMCA 3GTGA 2Y3PA 4KAWX 1IQ0A 1TWHK 4C3JK 4BBRC 3I4MK 3GTJA 5JVGS 1SFOC 3HOVC 2NVQC 1R9TA 1TWGK 1VLOA 5C3EC 4A3GK 1BGWA 2R93A 4WILA 4KN7A 3S15C 2JA7K 4WFAS 4FZBA 1F7UA 4OIQA 5IOSA 3V4GA 1TWHC 4C3JC 1YCLA 3GIRA 2NVXA 1I3QA 3H0GK 3S1NK 3I4MC 4GTEA 2GSOA 4GTFA 1WQHA 4AYBL 3OPFA 2A6HA 5HQHA 4QIWL 1TWGC 4OINA 4KARA 4A3GC 1Y1VK 5DM6S 2GAHC 3GTOA 4MEXA 2JA7C 3T02A 1K83A 1XZQB 5HL7S 4XLPA 2V6SA 3H0GC 3S1NC 2Y0SD 4YFNA 4A3MK 2NVXK 1I3QK 3GTJC 1XXCA 1Y1VC 1XXAA 2JA5A 1PJ5A 1XZPA 1DCPA 4YFKA 2KWAA 3S1QK 1USMA 1I50A 5M5WK 3GTOK 2PA8D 1BS2A 2NVTC 1VJEA 1K83K 4FM9A 2WB1D 5CJ9A 2L3UA 4KMUA 4A3JK 4DDQA 4A3MC 4PABA 2NVXC 1I3QC 3FKIA 3G4AA 2CFAA 2R7ZK 5D4DA 5M3MK 5DM7S 2YU9K 3S1QC 5TJ3A 2JA5K 4G0WA 4G0VA 3GTOC 3T01A 1WQFA 1K83C 3GEHA 2D6FC 4A3JC 3TTGA 5C4JK 3GTLA 3PO3C 1C0AA 4C3HK 2R7ZC 1HI9A 2V6UA 4OIPA 3MMLB 5IORA 2V6TA 3HOZK 2JA6A 3N0CA 3DXJA 3RZDK 2YU9C 3HXAA 3FKIK 2JA5C 4G7ZA 4MQ9A 3GSIA 2ZJPS 2FQTA 3IPJA 3GTQA 4JK1A 2E2HA 4C3HC 4XCHA 2XCRB 3HOZC 3BUEA 3GTLK 5IYDK 3RZDC 1EK8A 4A93K 3FKIC 2XCQA 2GAGC 2W7VA 3I4NC 2JA6K 2R92A 1IBAA 3GTMA 1SFOK 3PIOS 1WOOA 2Y0SL 4GTAA 3GTQK 3GTLC 5IYDC 4KMHA 4A93C 3ADAC 5IOTA 2JA6C 2A68A 2EBBA 4Q5SA 3FHZA 1O2FB 3HOUC 1WIHA 3SZYA 4C45A 1F7VA 2PA8L 5JFEA 3DLLS 1O2BA 2WB1L 3AD8C 3GTMK 4BLBA 3GTQC 4LJZA 1IL2A 3CQZA 1WOPA 2A6EA 1ZVUA 1BDFA 4KC6A 4YFXA 3Q3QA 1O26A 3GTGK 1PJ7A 3N0BA 2GSUA 1VRQC 5HL8A 2E2IA 1DCOA 3A8IA 3S1MC 5E68A 3GTMC 3GTJK 4WF9S 4WFNS 1F9NA 3S0XA 5C44C 1R9TK 1TWAA 3CAGA 4A3DK 3QX3A 4LOWA 1WCMA 4KATA 1FEUA 3VA7A 3CQZK 2R93K 4IOAS 5CHPA 1IS1A 3HKZL 3PIPS 3GTGC 2NVTK 4WCES 3TFIA 3S1RK 2JA8K 1ZXOA 5L46A 4C3IK 2PHCB 1ZBSA 4GTLA 5JVOA 1TWFA 2E2IK 1O28A 3OREA 1R9TC 1O27A 1J98A 4A3DC 2RH6A 1INNA 2R93C 2CW0A 3CQZC 2FQOA 4A3EC 2NVYA 3GTPA 1WCMK 1I6HK 3S1RC 2JA8C 4GZYA 1AB4A 1JQWA 1X31C 4KM8A 4C3IC 2O5IA 1O24A 3S2DK 1KQ4A 2P5MA 4A3BK 3PO3K 4LQYA 3M4OK 2E2IC 3AQPA 4XSZA 5IP7K 1TWFK 3T00A 3FOFA 1IW7A 1I50K 1WCMC 1EFWA 4O2DA 1I6HC 3GDZA 2KQ1A 3HOXC 4G7OA 2ZFZA 4G0UA 1B4BA 3S2DC 1GE9A 4A3BC 1EQRA 3M4OC 5C4XK 5IP7C 1TWFC 4MEYA 3RZOC 3I4NK 5IOQA 4LLGA 4A3LK 1I50C 5EGEA 4KB2A 5C4XC 4BY1K 3LAJA 1YNJA 2ZUEA 3GTKA 3A8KA 4ILDA 4NOIA 4OIRA 1XPPA 3L4JA 2L5NA 4GTDA 3FOEA 1XZPB 2WAQD 4A3LC 4PAAA 2PPBA 3HOUK 1Y1WA 4P5BA 4GTCA 2B63A 2ZUFA 1YNNA 4C2MK 1O25A 3TFHA 4ZH4A 1JOEA 4BY1C 3A8JA 2E2HK 4X6AK 2CFAB 1XZQA 3GTKK 2JH3A 1TWHA 1YX2A 1UV7A 3AQOA 4BKWA 1PJ6A 1EH1A 1WSVA 2R92K 3S1MK 1Y1WK 4C2MC 4WJ4A 2KXYA 1ZQ1C 3EQLA 2E2HC 5C44K 3HOYK 3GEEA 4X6AC 3JSTA 3GTKC 1O2AA 3H0GA 1WORA 4Y52K 2A69A 2O5JA 2R92C 3S17K 1Y1WC 1J6WA 1Y1VA 1DCHA 5IP9K 4YG2A 4KASA 2B63C 4QJVB 1EI6A 3M3YK 4AH6A 3HOWK 4M1XA 4IOCS 2ZJQS 3HOYC 5M5YK 4KN4A 4A3FK 2P8TA 4A3CK 4A3EK 4LK0A 2RGRA 4Y52C 1J6VA 4J3NA 2BE5A 3S17C 3WODA 5IP9C 1F93A 1O29A 3M3YC 3HOWC 1V5VA 2ZJRS 2PMZD 4BY7K 4A3FC 4A3KK 5FJ8K 4RMFA 4A3CC 3G4CA 1TWAK 4KMDA 3BP3A 4XSXA 3NUHA 3HOXK 2WAQL 3BP8C 1DD5A 3H3VD 2R7ZA 1WQGA 3OEPA 1RU0A 1I6VA 3PO2K 2YU9A 1ZYRA 4A3IK 4BY7C 1L0WA 4A3KC 1TWCA 3RZOK 3L4KA 1TWAC 1USOA 3AD9C 4GTBA 2VUMA 4G7HA 2NVYK 3GTPK 3S14K 1XXBA 3SZZA 1BJTA 2XCOA 4LK1A 4KM9A 3CF5S 5EGHA 3AH5A 5IYBK 3PO2C 4A3IC 4KDDA 3LAPA 4BBSK 3AD7C 1HQMA 3LYWA 4OIOA 1B4AA 5TMFA 1TWCK 4AYBD 4BXXK 4QIWD 2NVYC 3GTPC 4U67S 3S14C 2KPUA 5JVHS 1WOSA 2VUMK 1IE0A 4P5AA 5IYBC 4IO9S 5M3FK 3GEIA 4BBSC 4WJ3M 1J6XA 4Q4ZA 3HKZD 4LR2A 3ERED 4WFBS 1TWCC 1SFOA 3S2HK 4BXXC 1WSRA 4Y7NK 3K7AK 4QJVA 5IYCK 2VUMC 2E2JK 5C4JC 4XLNA 1ISEA 3S16K 3N3YA 1SMYA 1VGXA 3LPXA 5FLMK
chains in the Genus database with same CATH topology
4A3JC 2R92C 3S17K 1Y1WC 5M5XK 2R93C 2CW0A 3CQZC 5C4JK 4A3EC 5IP9K 3PO3C 4YG2A 2PMZL 2B63C 4QJVB 3S2HC 4C3HK 2R7ZC 4Y7NC 1WCMK 4OIPA 3K7AC 3HOWK 3M3YK 3HOYC 3HOZK 3S1RC 1I6HK 2JA8C 4GZYA 3DXJA 4KN4A 2YU9C 4C3IC 2O5IA 3FKIK 4BBRK 5M5YK 4A3FK 3RZDK 2JA5C 3HOVK 4A3CK 5IYCC 2E2JC 3S16C 4G7ZA 2NVQK 3S2DK 4A3EK 4A3BK 3PO3K 3M4OK 2E2IC 4LK0A 4MQ9A 2B63K 5C3EK 3H3VL 4XSZA 4Y52C 5IP7K 2BE5A 5FLMC 1TWFK 3S15K 3S17C 4JK1A 5TMCA 3WODA 4A93K 5IP9C 1IW7A 1I50K 4C3HC 1TWHK 1WCMC 3M3YC 3HOWC 4C3JK 3HOZC 1I6HC 3HOXC 3GTLK 5IYDK 3RZDC 2PMZD 4BBRC 3I4MK 3FKIC 4A3FC 1SFOC 4G7OA 3HOVC 5FJ8K 4A3KK 4A3CC 2NVQC 3S2DC 1TWAK 4A3BC 3I4NC 2JA6K 3M4OC 5C4XK 1TWGK 4A3GK 5C3EC 5IP7C 4XSXA 3HOXK 4BY7K 1TWFC 2WAQL 1SFOK 4MEYA 4KN7A 3S15C 3H3VD 2JA7K 3RZOC 4OIQA 3I4NK 4LLGA 4A3LK 1I50C 1I6VA 2Y0SL 1TWHC 3GTQK 3PO2K 4C3JC 1ZYRA 4A3IK 3GTLC 5IYDC 4BY7C 4A93C 3I4MC 3H0GK 4A3KC 3RZOK 3S1NK 4AYBL 1TWAC 2A6HA 2JA6C 2A68A 5C4XC 4QIWL 1TWGC 4OINA 4Q5SA 4A3GC 1Y1VK 4BY1K 1YNJA 3HOUC 4G7HA 4NOIA 4OIRA 1XPPA 4MEXA 2NVYK 3GTPK 3S14K 2JA7C 2PA8L 4LK1A 2WB1L 2WAQD 3GTMK 4A3LC 5IYBK 3GTQC 3PO2C 4LJZA 4XLPA 2PPBA 5FLMK 3HOUK 4A3IC 4BBSK 3H0GC 2A6EA 3S1NC 2Y0SD 1BDFA 4YFNA 1HQMA 4A3MK 1YNNA 4C2MK 2NVXK 4YFXA 4OIOA 1I3QK 4ZH4A 5TMFA 3GTJC 1Y1VC 4BY1C 1TWCK 4AYBD 2E2HK 3GTGK 4BXXK 4QIWD 2NVYC 3GTPC 3S14C 4X6AK 4YFKA 3GTKK 3S1QK 3S1MC 2VUMK 3GTMC 5M5WK 3GTJK 5IYBC 3GTOK 2PA8D 2NVTC 5M3FK 1K83K 2WB1D 5C44C 1R9TK 4BBSC 4KMUA 4A3JK 4A3DK 4Q4ZA 2R92K 3HKZD 4A3MC 1Y1WK 3S1MK 2R93K 4C2MC 2NVXC 3CQZK 1I3QC 1TWCC 3GTGC 3EQLA 3HKZL 2E2HC 2NVTK 4BXXC 2R7ZK 5C44K 4Y7NK 3S2HK 3K7AK 5D4DA 3HOYK 3S1RK 2JA8K 4X6AC 5M3MK 2YU9K 4C3IK 3GTKC 3S1QC 2JA5K 4QJVA 5IYCK 2VUMC 2E2JK 5C4JC 4XLNA 3S16K 3GTOC 1SMYA 2E2IK 1K83C 4Y52K 1R9TC 2A69A 2O5JA 4A3DC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4A3J C;  2R92 C;  3S17 K;  1Y1W C;  5M5X K;  2R93 C;  2CW0 A;  3CQZ C;  5C4J K;  4A3E C;  5IP9 K;  3PO3 C;  4YG2 A;  2PMZ L;  2B63 C;  4QJV B;  3S2H C;  4C3H K;  2R7Z C;  4Y7N C;  1WCM K;  4OIP A;  3K7A C;  3HOW K;  3M3Y K;  3HOY C;  3HOZ K;  3S1R C;  1I6H K;  2JA8 C;  4GZY A;  3DXJ A;  4KN4 A;  2YU9 C;  4C3I C;  2O5I A;  3FKI K;  4BBR K;  5M5Y K;  4A3F K;  3RZD K;  2JA5 C;  3HOV K;  4A3C K;  5IYC C;  2E2J C;  3S16 C;  4G7Z A;  2NVQ K;  3S2D K;  4A3E K;  4A3B K;  3PO3 K;  3M4O K;  2E2I C;  4LK0 A;  4MQ9 A;  2B63 K;  5C3E K;  3H3V L;  4XSZ A;  4Y52 C;  5IP7 K;  2BE5 A;  5FLM C;  1TWF K;  3S15 K;  3S17 C;  4JK1 A;  5TMC A;  3WOD A;  4A93 K;  5IP9 C;  1IW7 A;  1I50 K;  4C3H C;  1TWH K;  1WCM C;  3M3Y C;  3HOW C;  4C3J K;  3HOZ C;  1I6H C;  3HOX C;  3GTL K;  5IYD K;  3RZD C;  2PMZ D;  4BBR C;  3I4M K;  3FKI C;  4A3F C;  1SFO C;  4G7O A;  3HOV C;  5FJ8 K;  4A3K K;  4A3C C;  2NVQ C;  3S2D C;  1TWA K;  4A3B C;  3I4N C;  2JA6 K;  3M4O C;  5C4X K;  1TWG K;  4A3G K;  5C3E C;  5IP7 C;  4XSX A;  3HOX K;  4BY7 K;  1TWF C;  2WAQ L;  1SFO K;  4MEY A;  4KN7 A;  3S15 C;  3H3V D;  2JA7 K;  3RZO C;  4OIQ A;  3I4N K;  4LLG A;  4A3L K;  1I50 C;  1I6V A;  2Y0S L;  1TWH C;  3GTQ K;  3PO2 K;  4C3J C;  1ZYR A;  4A3I K;  3GTL C;  5IYD C;  4BY7 C;  4A93 C;  3I4M C;  3H0G K;  4A3K C;  3RZO K;  3S1N K;  4AYB L;  1TWA C;  2A6H A;  2JA6 C;  2A68 A;  5C4X C;  4QIW L;  1TWG C;  4OIN A;  4Q5S A;  4A3G C;  1Y1V K;  4BY1 K;  1YNJ A;  3HOU C;  4G7H A;  4NOI A;  4OIR A;  1XPP A;  4MEX A;  2NVY K;  3GTP K;  3S14 K;  2JA7 C;  2PA8 L;  4LK1 A;  2WB1 L;  2WAQ D;  3GTM K;  4A3L C;  5IYB K;  3GTQ C;  3PO2 C;  4LJZ A;  4XLP A;  2PPB A;  5FLM K;  3HOU K;  4A3I C;  4BBS K;  3H0G C;  2A6E A;  3S1N C;  2Y0S D;  1BDF A;  4YFN A;  1HQM A;  4A3M K;  1YNN A;  4C2M K;  2NVX K;  4YFX A;  4OIO A;  1I3Q K;  4ZH4 A;  5TMF A;  3GTJ C;  1Y1V C;  4BY1 C;  1TWC K;  4AYB D;  2E2H K;  3GTG K;  4BXX K;  4QIW D;  2NVY C;  3GTP C;  3S14 C;  4X6A K;  4YFK A;  3GTK K;  3S1Q K;  3S1M C;  2VUM K;  3GTM C;  5M5W K;  3GTJ K;  5IYB C;  3GTO K;  2PA8 D;  2NVT C;  5M3F K;  1K83 K;  2WB1 D;  5C44 C;  1R9T K;  4BBS C;  4KMU A;  4A3J K;  4A3D K;  4Q4Z A;  2R92 K;  3HKZ D;  4A3M C;  1Y1W K;  3S1M K;  2R93 K;  4C2M C;  2NVX C;  3CQZ K;  1I3Q C;  1TWC C;  3GTG C;  3EQL A;  3HKZ L;  2E2H C;  2NVT K;  4BXX C;  2R7Z K;  5C44 K;  4Y7N K;  3S2H K;  3K7A K;  5D4D A;  3HOY K;  3S1R K;  2JA8 K;  4X6A C;  5M3M K;  2YU9 K;  4C3I K;  3GTK C;  3S1Q C;  2JA5 K;  4QJV A;  5IYC K;  2VUM C;  2E2J K;  5C4J C;  4XLN A;  3S16 K;  3GTO C;  1SMY A;  2E2I K;  1K83 C;  4Y52 K;  1R9T C;  2A69 A;  2O5J A;  4A3D C; 
#chains in the Genus database with same CATH topology
 4P9S A;  4BLA A;  5M5X K;  2PMZ L;  3S2H C;  4Y7N C;  4GFQ A;  3K7A C;  1JVI A;  1VH2 A;  1TWG A;  4BBR K;  3HOV K;  4KB4 A;  5IYC C;  2E2J C;  3S16 C;  2NVQ K;  1G51 A;  2B63 K;  4GT9 A;  4KMA A;  2JA7 A;  5C3E K;  2GSN A;  3H3V L;  3TFJ A;  5FLM C;  3S15 K;  5TMC A;  3GTG A;  2Y3P A;  4KAW X;  1IQ0 A;  1TWH K;  4C3J K;  4BBR C;  3I4M K;  3GTJ A;  5JVG S;  1SFO C;  3HOV C;  2NVQ C;  1R9T A;  1TWG K;  1VLO A;  5C3E C;  4A3G K;  1BGW A;  2R93 A;  4WIL A;  4KN7 A;  3S15 C;  2JA7 K;  4WFA S;  4FZB A;  1F7U A;  4OIQ A;  5IOS A;  3V4G A;  1TWH C;  4C3J C;  1YCL A;  3GIR A;  2NVX A;  1I3Q A;  3H0G K;  3S1N K;  3I4M C;  4GTE A;  2GSO A;  4GTF A;  1WQH A;  4AYB L;  3OPF A;  2A6H A;  5HQH A;  4QIW L;  1TWG C;  4OIN A;  4KAR A;  4A3G C;  1Y1V K;  5DM6 S;  2GAH C;  3GTO A;  4MEX A;  2JA7 C;  3T02 A;  1K83 A;  1XZQ B;  5HL7 S;  4XLP A;  2V6S A;  3H0G C;  3S1N C;  2Y0S D;  4YFN A;  4A3M K;  2NVX K;  1I3Q K;  3GTJ C;  1XXC A;  1Y1V C;  1XXA A;  2JA5 A;  1PJ5 A;  1XZP A;  1DCP A;  4YFK A;  2KWA A;  3S1Q K;  1USM A;  1I50 A;  5M5W K;  3GTO K;  2PA8 D;  1BS2 A;  2NVT C;  1VJE A;  1K83 K;  4FM9 A;  2WB1 D;  5CJ9 A;  2L3U A;  4KMU A;  4A3J K;  4DDQ A;  4A3M C;  4PAB A;  2NVX C;  1I3Q C;  3FKI A;  3G4A A;  2CFA A;  2R7Z K;  5D4D A;  5M3M K;  5DM7 S;  2YU9 K;  3S1Q C;  5TJ3 A;  2JA5 K;  4G0W A;  4G0V A;  3GTO C;  3T01 A;  1WQF A;  1K83 C;  3GEH A;  2D6F C;  4A3J C;  3TTG A;  5C4J K;  3GTL A;  3PO3 C;  1C0A A;  4C3H K;  2R7Z C;  1HI9 A;  2V6U A;  4OIP A;  3MML B;  5IOR A;  2V6T A;  3HOZ K;  2JA6 A;  3N0C A;  3DXJ A;  3RZD K;  2YU9 C;  3HXA A;  3FKI K;  2JA5 C;  4G7Z A;  4MQ9 A;  3GSI A;  2ZJP S;  2FQT A;  3IPJ A;  3GTQ A;  4JK1 A;  2E2H A;  4C3H C;  4XCH A;  2XCR B;  3HOZ C;  3BUE A;  3GTL K;  5IYD K;  3RZD C;  1EK8 A;  4A93 K;  3FKI C;  2XCQ A;  2GAG C;  2W7V A;  3I4N C;  2JA6 K;  2R92 A;  1IBA A;  3GTM A;  1SFO K;  3PIO S;  1WOO A;  2Y0S L;  4GTA A;  3GTQ K;  3GTL C;  5IYD C;  4KMH A;  4A93 C;  3ADA C;  5IOT A;  2JA6 C;  2A68 A;  2EBB A;  4Q5S A;  3FHZ A;  1O2F B;  3HOU C;  1WIH A;  3SZY A;  4C45 A;  1F7V A;  2PA8 L;  5JFE A;  3DLL S;  1O2B A;  2WB1 L;  3AD8 C;  3GTM K;  4BLB A;  3GTQ C;  4LJZ A;  1IL2 A;  3CQZ A;  1WOP A;  2A6E A;  1ZVU A;  1BDF A;  4KC6 A;  4YFX A;  3Q3Q A;  1O26 A;  3GTG K;  1PJ7 A;  3N0B A;  2GSU A;  1VRQ C;  5HL8 A;  2E2I A;  1DCO A;  3A8I A;  3S1M C;  5E68 A;  3GTM C;  3GTJ K;  4WF9 S;  4WFN S;  1F9N A;  3S0X A;  5C44 C;  1R9T K;  1TWA A;  3CAG A;  4A3D K;  3QX3 A;  4LOW A;  1WCM A;  4KAT A;  1FEU A;  3VA7 A;  3CQZ K;  2R93 K;  4IOA S;  5CHP A;  1IS1 A;  3HKZ L;  3PIP S;  3GTG C;  2NVT K;  4WCE S;  3TFI A;  3S1R K;  2JA8 K;  1ZXO A;  5L46 A;  4C3I K;  2PHC B;  1ZBS A;  4GTL A;  5JVO A;  1TWF A;  2E2I K;  1O28 A;  3ORE A;  1R9T C;  1O27 A;  1J98 A;  4A3D C;  2RH6 A;  1INN A;  2R93 C;  2CW0 A;  3CQZ C;  2FQO A;  4A3E C;  2NVY A;  3GTP A;  1WCM K;  1I6H K;  3S1R C;  2JA8 C;  4GZY A;  1AB4 A;  1JQW A;  1X31 C;  4KM8 A;  4C3I C;  2O5I A;  1O24 A;  3S2D K;  1KQ4 A;  2P5M A;  4A3B K;  3PO3 K;  4LQY A;  3M4O K;  2E2I C;  3AQP A;  4XSZ A;  5IP7 K;  1TWF K;  3T00 A;  3FOF A;  1IW7 A;  1I50 K;  1WCM C;  1EFW A;  4O2D A;  1I6H C;  3GDZ A;  2KQ1 A;  3HOX C;  4G7O A;  2ZFZ A;  4G0U A;  1B4B A;  3S2D C;  1GE9 A;  4A3B C;  1EQR A;  3M4O C;  5C4X K;  5IP7 C;  1TWF C;  4MEY A;  3RZO C;  3I4N K;  5IOQ A;  4LLG A;  4A3L K;  1I50 C;  5EGE A;  4KB2 A;  5C4X C;  4BY1 K;  3LAJ A;  1YNJ A;  2ZUE A;  3GTK A;  3A8K A;  4ILD A;  4NOI A;  4OIR A;  1XPP A;  3L4J A;  2L5N A;  4GTD A;  3FOE A;  1XZP B;  2WAQ D;  4A3L C;  4PAA A;  2PPB A;  3HOU K;  1Y1W A;  4P5B A;  4GTC A;  2B63 A;  2ZUF A;  1YNN A;  4C2M K;  1O25 A;  3TFH A;  4ZH4 A;  1JOE A;  4BY1 C;  3A8J A;  2E2H K;  4X6A K;  2CFA B;  1XZQ A;  3GTK K;  2JH3 A;  1TWH A;  1YX2 A;  1UV7 A;  3AQO A;  4BKW A;  1PJ6 A;  1EH1 A;  1WSV A;  2R92 K;  3S1M K;  1Y1W K;  4C2M C;  4WJ4 A;  2KXY A;  1ZQ1 C;  3EQL A;  2E2H C;  5C44 K;  3HOY K;  3GEE A;  4X6A C;  3JST A;  3GTK C;  1O2A A;  3H0G A;  1WOR A;  4Y52 K;  2A69 A;  2O5J A;  2R92 C;  3S17 K;  1Y1W C;  1J6W A;  1Y1V A;  1DCH A;  5IP9 K;  4YG2 A;  4KAS A;  2B63 C;  4QJV B;  1EI6 A;  3M3Y K;  4AH6 A;  3HOW K;  4M1X A;  4IOC S;  2ZJQ S;  3HOY C;  5M5Y K;  4KN4 A;  4A3F K;  2P8T A;  4A3C K;  4A3E K;  4LK0 A;  2RGR A;  4Y52 C;  1J6V A;  4J3N A;  2BE5 A;  3S17 C;  3WOD A;  5IP9 C;  1F93 A;  1O29 A;  3M3Y C;  3HOW C;  1V5V A;  2ZJR S;  2PMZ D;  4BY7 K;  4A3F C;  4A3K K;  5FJ8 K;  4RMF A;  4A3C C;  3G4C A;  1TWA K;  4KMD A;  3BP3 A;  4XSX A;  3NUH A;  3HOX K;  2WAQ L;  3BP8 C;  1DD5 A;  3H3V D;  2R7Z A;  1WQG A;  3OEP A;  1RU0 A;  1I6V A;  3PO2 K;  2YU9 A;  1ZYR A;  4A3I K;  4BY7 C;  1L0W A;  4A3K C;  1TWC A;  3RZO K;  3L4K A;  1TWA C;  1USO A;  3AD9 C;  4GTB A;  2VUM A;  4G7H A;  2NVY K;  3GTP K;  3S14 K;  1XXB A;  3SZZ A;  1BJT A;  2XCO A;  4LK1 A;  4KM9 A;  3CF5 S;  5EGH A;  3AH5 A;  5IYB K;  3PO2 C;  4A3I C;  4KDD A;  3LAP A;  4BBS K;  3AD7 C;  1HQM A;  3LYW A;  4OIO A;  1B4A A;  5TMF A;  1TWC K;  4AYB D;  4BXX K;  4QIW D;  2NVY C;  3GTP C;  4U67 S;  3S14 C;  2KPU A;  5JVH S;  1WOS A;  2VUM K;  1IE0 A;  4P5A A;  5IYB C;  4IO9 S;  5M3F K;  3GEI A;  4BBS C;  4WJ3 M;  1J6X A;  4Q4Z A;  3HKZ D;  4LR2 A;  3ERE D;  4WFB S;  1TWC C;  1SFO A;  3S2H K;  4BXX C;  1WSR A;  4Y7N K;  3K7A K;  4QJV A;  5IYC K;  2VUM C;  2E2J K;  5C4J C;  4XLN A;  1ISE A;  3S16 K;  3N3Y A;  1SMY A;  1VGX A;  3LPX A;  5FLM K; 
#chains in the Genus database with same CATH homology
 4A3J C;  2R92 C;  3S17 K;  1Y1W C;  5M5X K;  2R93 C;  2CW0 A;  3CQZ C;  5C4J K;  4A3E C;  5IP9 K;  3PO3 C;  4YG2 A;  2PMZ L;  2B63 C;  4QJV B;  3S2H C;  4C3H K;  2R7Z C;  4Y7N C;  1WCM K;  4OIP A;  3K7A C;  3HOW K;  3M3Y K;  3HOY C;  3HOZ K;  3S1R C;  1I6H K;  2JA8 C;  4GZY A;  3DXJ A;  4KN4 A;  2YU9 C;  4C3I C;  2O5I A;  3FKI K;  4BBR K;  5M5Y K;  4A3F K;  3RZD K;  2JA5 C;  3HOV K;  4A3C K;  5IYC C;  2E2J C;  3S16 C;  4G7Z A;  2NVQ K;  3S2D K;  4A3E K;  4A3B K;  3PO3 K;  3M4O K;  2E2I C;  4LK0 A;  4MQ9 A;  2B63 K;  5C3E K;  3H3V L;  4XSZ A;  4Y52 C;  5IP7 K;  2BE5 A;  5FLM C;  1TWF K;  3S15 K;  3S17 C;  4JK1 A;  5TMC A;  3WOD A;  4A93 K;  5IP9 C;  1IW7 A;  1I50 K;  4C3H C;  1TWH K;  1WCM C;  3M3Y C;  3HOW C;  4C3J K;  3HOZ C;  1I6H C;  3HOX C;  3GTL K;  5IYD K;  3RZD C;  2PMZ D;  4BBR C;  3I4M K;  3FKI C;  4A3F C;  1SFO C;  4G7O A;  3HOV C;  5FJ8 K;  4A3K K;  4A3C C;  2NVQ C;  3S2D C;  1TWA K;  4A3B C;  3I4N C;  2JA6 K;  3M4O C;  5C4X K;  1TWG K;  4A3G K;  5C3E C;  5IP7 C;  4XSX A;  3HOX K;  4BY7 K;  1TWF C;  2WAQ L;  1SFO K;  4MEY A;  4KN7 A;  3S15 C;  3H3V D;  2JA7 K;  3RZO C;  4OIQ A;  3I4N K;  4LLG A;  4A3L K;  1I50 C;  1I6V A;  2Y0S L;  1TWH C;  3GTQ K;  3PO2 K;  4C3J C;  1ZYR A;  4A3I K;  3GTL C;  5IYD C;  4BY7 C;  4A93 C;  3I4M C;  3H0G K;  4A3K C;  3RZO K;  3S1N K;  4AYB L;  1TWA C;  2A6H A;  2JA6 C;  2A68 A;  5C4X C;  4QIW L;  1TWG C;  4OIN A;  4Q5S A;  4A3G C;  1Y1V K;  4BY1 K;  1YNJ A;  3HOU C;  4G7H A;  4NOI A;  4OIR A;  1XPP A;  4MEX A;  2NVY K;  3GTP K;  3S14 K;  2JA7 C;  2PA8 L;  4LK1 A;  2WB1 L;  2WAQ D;  3GTM K;  4A3L C;  5IYB K;  3GTQ C;  3PO2 C;  4LJZ A;  4XLP A;  2PPB A;  5FLM K;  3HOU K;  4A3I C;  4BBS K;  3H0G C;  2A6E A;  3S1N C;  2Y0S D;  1BDF A;  4YFN A;  1HQM A;  4A3M K;  1YNN A;  4C2M K;  2NVX K;  4YFX A;  4OIO A;  1I3Q K;  4ZH4 A;  5TMF A;  3GTJ C;  1Y1V C;  4BY1 C;  1TWC K;  4AYB D;  2E2H K;  3GTG K;  4BXX K;  4QIW D;  2NVY C;  3GTP C;  3S14 C;  4X6A K;  4YFK A;  3GTK K;  3S1Q K;  3S1M C;  2VUM K;  3GTM C;  5M5W K;  3GTJ K;  5IYB C;  3GTO K;  2PA8 D;  2NVT C;  5M3F K;  1K83 K;  2WB1 D;  5C44 C;  1R9T K;  4BBS C;  4KMU A;  4A3J K;  4A3D K;  4Q4Z A;  2R92 K;  3HKZ D;  4A3M C;  1Y1W K;  3S1M K;  2R93 K;  4C2M C;  2NVX C;  3CQZ K;  1I3Q C;  1TWC C;  3GTG C;  3EQL A;  3HKZ L;  2E2H C;  2NVT K;  4BXX C;  2R7Z K;  5C44 K;  4Y7N K;  3S2H K;  3K7A K;  5D4D A;  3HOY K;  3S1R K;  2JA8 K;  4X6A C;  5M3M K;  2YU9 K;  4C3I K;  3GTK C;  3S1Q C;  2JA5 K;  4QJV A;  5IYC K;  2VUM C;  2E2J K;  5C4J C;  4XLN A;  3S16 K;  3GTO C;  1SMY A;  2E2I K;  1K83 C;  4Y52 K;  1R9T C;  2A69 A;  2O5J A;  4A3D C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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