4A3EC

Rna polymerase ii initial transcribing complex with a 5nt dna-rna hybrid and soaked with ampcpp
Total Genus 63
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
63
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1
publication title Structural basis of initial RNA polymerase II transcription.
pubmed doi rcsb
molecule tags Transcription
total genus 63
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-09-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 4a3eC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 4a3eC01
1YNNA 2R92C 3PO2C 2A69A 4YFNA 4OIRA 4BXXC 5D4DA 5FJ8K 3S1MK 2Y0SD 4C3HK 4G7HA 3HOXK 4A3KK 2NVYK 2E2HK 2NVXK 2YU9K 1TWAC 3GTJC 4YG2A 4BXXK 3HKZD 3S1QK 5IP9K 4QJVA 2PMZL 1TWCC 4Y7NK 4BY7C 4A3JC 2NVTC 3GTOC 3HOUK 3EQLA 4A93C 4A3MC 3GTMK 3I4NK 2JA5C 2WB1D 4A3FC 4QIWD 1I3QK 4A3JK 2NVQC 1R9TK 5IYCC 3GTPK 2PA8L 4C3IC 3CQZC 2BE5A 2E2JK 3HOVC 3S14K 1I50C 2CW0A 2JA7C 2R7ZC 4BBRC 1SMYA 3HOYC 4XLNA 4OINA 3PO3C 3H0GK 3S2DK 1TWHK 4MEYA 4C3JC 3S17C 4X6AC 4BY1K 4NOIA 3RZDC 4Q4ZA 4Q5SA 4OIQA 2Y0SL 3HOZC 4BBSK 1I6HK 5IYBC 1Y1VK 3S1NC 5M3FK 5IP7C 3S15K 5FLMC 3HKZL 4OIPA 4YFXA 3S16C 5M5WK 1SFOK 3HOWK 4XSXA 4G7OA 5C44K 4LLGA 2R92K 4XLPA 4A3GC 1WCMC 3PO2K 4A3BK 4LJZA 4JK1A 2WB1L 3K7AC 3GTKK 1WCMK 1TWAK 4YFKA 3GTJK 2JA6C 5C4JC 1TWCK 4BY7K 1TWFC 4ZH4A 4A3EC 2NVTK 3GTOK 2WAQD 4A93K 2PPBA 3S2HC 4A3MK 2JA5K 2O5IA 4A3FK 4G7ZA 4A3IC 2O5JA 4A3LC 3GTLC 2NVQK 5IYCK 3FKIC 4C3IK 3CQZK 3HOVK 4A3CC 1I50K 2JA7K 3GTLK 2R7ZK 4BBRK 3HOYK 3PO3K 3DXJA 5C4XC 3RZOC 4C3JK 3S17K 4X6AK 3H3VD 3M4OC 1I6VA 3RZDK 2JA8C 3HOZK 4KN7A 5IYDC 5M5YK 2R93C 5IYBK 2A6HA 3S1NK 4A3DC 5IP7K 5FLMK 4XSZA 3GTQC 3I4MC 5M3MK 3S16K 5C3EC 2E2IC 4QIWL 3M3YC 2WAQL 4A3GK 2VUMC 4GZYA 1Y1WC 3K7AK 3S1RC 2JA6K 1K83C 5C4JK 3GTKC 4OIOA 4Y52C 1HQMA 4A3BC 4QJVB 1TWFK 3S1MC 4A3EK 4BBSC 3WODA 4KN4A 2A68A 3S2HK 5M5XK 4A3IK 1BDFA 3H3VL 4A3KC 2NVYC 2E2HC 2NVXC 4A3LK 1YNJA 2B63C 3S1QC 3FKIK 5IP9C 3GTGC 1IW7A 4MQ9A 4AYBD 4Y7NC 4A3CK 1ZYRA 2B63K 4C2MC 3HOUC 3GTMC 3I4NC 3GTGK 5C4XK 3RZOK 3M4OK 1I3QC 1R9TC 3GTPC 4C2MK 4LK0A 1XPPA 2PMZD 5TMCA 2E2JC 3S14C 2JA8K 5IYDK 2R93K 2YU9C 3H0GC 4MEXA 4A3DK 3I4MK 3GTQK 3S2DC 1TWHC 5C3EK 2E2IK 4BY1C 4KMUA 3M3YK 1TWGC 2PA8D 2VUMK 5TMFA 1Y1WK 1I6HC 2A6EA 1Y1VC 3S15C 3S1RK 1TWGK 4LK1A 1K83K 4C3HC 1SFOC 3HOWC 4AYBL 4Y52K 5C44C 3HOXC
chains in the Genus database with same CATH superfamily
1YNNA 3S1MK 4YFNA 2L5NA 4BXXC 5D4DA 2Y0SD 4G7HA 3BP8C 3HKZD 4KC6A 4PAAA 2PMZL 4LQYA 4Y7NK 1XZQA 3GTOC 4A93C 4A3MC 1WCMA 3GTJA 2WB1D 2XCQA 4RMFA 2NVQC 2D6FC 2PA8L 3A8KA 4U67S 2CW0A 2R7ZC 1BGWA 4C3JC 3S17C 4X6AC 1JOEA 4NOIA 3RZDC 4Q4ZA 2EBBA 3HOZC 1F7VA 3S1NC 5IORA 5FLMC 5M5WK 1SFOK 4XSXA 5C44K 3L4JA 4LLGA 1B4BA 2CFAB 3PO2K 1WCMC 1O2FB 3N3YA 1WORA 3K7AC 4BKWA 1TWCK 2KQ1A 2NVTK 2WAQD 3S2HC 2JA5K 2O5IA 3HXAA 2V6TA 3IPJA 4A3CC 4P5BA 3GTLK 4AH6A 1ZBSA 4BBRK 3DXJA 3FKIA 2ZJPS 1JQWA 4KMAA 2B63A 1O26A 4KN7A 5IYBK 3LAJA 3I4MC 4KARA 2ZJRS 4PABA 4GZYA 1Y1WC 3GTQA 2E2IA 2JA6K 1K83C 5C4JK 2PHCB 4QJVB 3S1MC 1B4AA 4KN4A 1TWGA 5HL7S 3H3VL 1XZPB 4LR2A 1YNJA 2B63C 4MQ9A 4Y7NC 1O27A 1O28A 3L4KA 4C2MC 5C4XK 1WSVA 5JVGS 1UV7A 2PMZD 5IYDK 2R93K 3BP3A 4A3DK 1I3QA 5JVOA 1TWGC 2PA8D 2V6SA 4GTDA 5TMFA 1USMA 2A6EA 2L3UA 1SFOC 4AYBL 4Y52K 5C44C 3HOXC 5FJ8K 3PO2C 2A69A 4OIRA 3G4CA 4FZBA 4C3HK 5DM7S 2NVYK 2NVXK 2V6UA 4YG2A 5IP9K 1TWCC 4GTAA 2NVTC 3EQLA 3I4NK 2JA5C 1DCHA 5IOSA 4QIWD 1BS2A 4WCES 4A3JK 5IOTA 1WOOA 3GTOA 2BE5A 2E2JK 1FEUA 2YU9K 4BBRC 3H0GK 4WF9S 3S2DK 1TWHK 3GEEA 2R7ZA 3T01A 2GSNA 5IYBC 1Y1VK 4GTFA 4OIPA 4GT9A 2R92K 4XLPA 3QX3A 1YX2A 1F7UA 1USOA 2R93A 1TWAK 2JA6C 5C4JC 1XXBA 3JSTA 1JVIA 5JVHS 5E68A 4G7ZA 5IYCK 3GEHA 1DCOA 3CQZK 3HOVK 3S0XA 1I50K 2JA7K 4ILDA 3PIOS 5C4XC 4WJ3M 3H3VD 1I6VA 5IYDC 1VH2A 2R93C 4A3DC 5IP7K 3OREA 5M3MK 3S16K 4QIWL 4A3GK 2GSOA 3SZYA 4KB2A 2ZFZA 1WQGA 4Y52C 1WQHA 2CFAA 1TWHA 1TWFK 1C0AA 4A3EK 1Y1WA 5M5XK 2P8TA 1K83A 2NVYC 2NVXC 3AD9C 5IP9C 4AYBD 1O2AA 2P5MA 3I4NC 3GTGK 3AQOA 3RZOK 1EK8A 3M4OK 4DDQA 1DD5A 4BLBA 4G0UA 2E2JC 1INNA 2YU9C 3H0GC 3T00A 3S2DC 1TWHC 5C3EK 3TTGA 3M3YK 2VUMK 2GAGC 4KDDA 1Y1VC 2ZUFA 3S1RK 4LOWA 2JA7A 4LK1A 3GTKK 3GDZA 2R92C 4GTBA 5HQHA 3MMLB 3N0BA 4KM9A 1SFOA 3GSIA 1TWAC 4BXXK 3S1QK 4M1XA 4QJVA 1F9NA 2KXYA 5L46A 3PIPS 4GFQA 1ZVUA 1XZPA 4KASA 3SZZA 1TWCA 4C45A 1R9TK 3GTPK 5IYCC 3CQZC 2RH6A 3S14K 3HOVC 2JA5A 1I50C 2JA7C 5TJ3A 4XLNA 3AQPA 1F93A 4Q5SA 4OIQA 3GTLA 4FM9A 3N0CA 1IBAA 5M3FK 5IP7C 3S15K 3GEIA 1O25A 1PJ6A 3S16C 3HOWK 4GTEA 1AB4A 4A3GC 1J6VA 1IE0A 2Y3PA 1EQRA 5CJ9A 4GTLA 1WCMK 3GTJK 1O24A 2W7VA 4BY7K 1TWFC 4ZH4A 5DM6S 4A3EC 4A3FK 2JA6A 4WFNS 2O5JA 3GTLC 3ERED 3OPFA 4KATA 1O29A 4C3IK 2RGRA 3HOYK 3PO3K 3AD8C 3RZOC 3M4OC 5M5YK 4KMDA 4IOAS 4XSZA 1ZXOA 5C3EC 2FQOA 1KQ4A 3M3YC 2VUMC 2XCOA 4IOCS 3S1RC 1EH1A 4KMHA 3GTKC 3CAGA 1XZQB 2GSUA 2A68A 4A3IK 1BDFA 4A3LK 3S1QC 3FKIK 1IW7A 2KWAA 4WFBS 2B63K 2NVYA 2NVXA 5EGEA 1YCLA 1R9TC 3GTPC 4C2MK 4KB4A 1WIHA 2JA8K 3S14C 3V4GA 4MEXA 3AD7C 1XXCA 3GTQK 2E2IK 1WSRA 2YU9A 3H0GA 1ISEA 3FOFA 3S15C 1TWGK 1X31C 1HI9A 1PJ7A 4C3HC 3HOWC 4A3BK 4KM8A 4BBSK 1Y1VA 2GAHC 3HOXK 3T02A 3VA7A 4A3KK 2E2HK 4G0VA 3GTJC 1EI6A 1VGXA 5JFEA 2R92A 4BY7C 4BLAA 1J6WA 1O2BA 4A3JC 3HOUK 3GTMK 1TWAA 1VRQC 4A3FC 1I3QK 3TFHA 4C3IC 5EGHA 5IOQA 1SMYA 3HOYC 3PO3C 4OINA 3GIRA 4MEYA 4BY1K 3LPXA 3CQZA 1RU0A 3A8JA 1I50A 2Y0SL 3NUHA 1I6HK 3HKZL 4YFXA 2XCRB 2FQTA 4G7OA 1V5VA 1EFWA 4LJZA 4JK1A 2WB1L 4KAWX 3CF5S 1ZQ1C 4YFKA 1L0WA 4P9SA 3TFJA 3GTOK 1IL2A 4A93K 2PPBA 4A3MK 4O2DA 4A3IC 1VLOA 4A3LC 2NVQK 1TWFA 3FKIC 1IQ0A 4WJ4A 3FHZA 1XXAA 2R7ZK 1IS1A 4C3JK 3S17K 1PJ5A 4X6AK 3TFIA 3FOEA 4J3NA 3RZDK 2E2HA 2JA8C 3HOZK 1DCPA 4GTCA 3GTGA 1J6XA 2A6HA 3S1NK 5FLMK 1WOPA 3GTQC 3GTMA 2E2IC 3AH5A 2WAQL 1VJEA 2ZUEA 3K7AK 1G51A 4OIOA 3A8IA 1HQMA 4A3BC 4G0WA 2VUMA 1GE9A 4BBSC 3Q3QA 3WODA 4WILA 3S2HK 3GTKA 4A3KC 2KPUA 2E2HC 5HL8A 2JH3A 3GTGC 4A3CK 1ZYRA 4XCHA 3HOUC 3GTMC 3G4AA 1BJTA 4WFAS 1I3QC 3ADAC 4LK0A 4P5AA 5CHPA 1XPPA 5TMCA 3OEPA 3I4MK 1R9TA 3GTPA 4IO9S 1J98A 4BY1C 1WOSA 1WQFA 4KMUA 3DLLS 3LAPA 3BUEA 2ZJQS 1Y1WK 3LYWA 1I6HC 1K83K
chains in the Genus database with same CATH topology
1YNNA 2R92C 3PO2C 2A69A 4YFNA 4OIRA 4BXXC 5D4DA 5FJ8K 3S1MK 2Y0SD 4C3HK 4G7HA 3HOXK 4A3KK 2NVYK 2E2HK 2NVXK 2YU9K 1TWAC 3GTJC 4YG2A 4BXXK 3HKZD 3S1QK 5IP9K 4QJVA 2PMZL 1TWCC 4Y7NK 4BY7C 4A3JC 2NVTC 3GTOC 3HOUK 3EQLA 4A93C 4A3MC 3GTMK 3I4NK 2JA5C 2WB1D 4A3FC 4QIWD 1I3QK 4A3JK 2NVQC 1R9TK 5IYCC 3GTPK 2PA8L 4C3IC 3CQZC 2BE5A 2E2JK 3HOVC 3S14K 1I50C 2CW0A 2JA7C 2R7ZC 4BBRC 1SMYA 3HOYC 4XLNA 4OINA 3PO3C 3H0GK 3S2DK 1TWHK 4MEYA 4C3JC 3S17C 4X6AC 4BY1K 4NOIA 3RZDC 4Q4ZA 4Q5SA 4OIQA 2Y0SL 3HOZC 4BBSK 1I6HK 5IYBC 1Y1VK 3S1NC 5M3FK 5IP7C 3S15K 5FLMC 3HKZL 4OIPA 4YFXA 3S16C 5M5WK 1SFOK 3HOWK 4XSXA 4G7OA 5C44K 4LLGA 2R92K 4XLPA 4A3GC 1WCMC 3PO2K 4A3BK 4LJZA 4JK1A 2WB1L 3K7AC 3GTKK 1WCMK 1TWAK 4YFKA 3GTJK 2JA6C 5C4JC 1TWCK 4BY7K 1TWFC 4ZH4A 4A3EC 2NVTK 3GTOK 2WAQD 4A93K 2PPBA 3S2HC 4A3MK 2JA5K 2O5IA 4A3FK 4G7ZA 4A3IC 2O5JA 4A3LC 3GTLC 2NVQK 5IYCK 3FKIC 4C3IK 3CQZK 3HOVK 4A3CC 1I50K 2JA7K 3GTLK 2R7ZK 4BBRK 3HOYK 3PO3K 3DXJA 5C4XC 3RZOC 4C3JK 3S17K 4X6AK 3H3VD 3M4OC 1I6VA 3RZDK 2JA8C 3HOZK 4KN7A 5IYDC 5M5YK 2R93C 5IYBK 2A6HA 3S1NK 4A3DC 5IP7K 5FLMK 4XSZA 3GTQC 3I4MC 5M3MK 3S16K 5C3EC 2E2IC 4QIWL 3M3YC 2WAQL 4A3GK 2VUMC 4GZYA 1Y1WC 3K7AK 3S1RC 2JA6K 1K83C 5C4JK 3GTKC 4OIOA 4Y52C 1HQMA 4A3BC 4QJVB 1TWFK 3S1MC 4A3EK 4BBSC 3WODA 4KN4A 2A68A 3S2HK 5M5XK 4A3IK 1BDFA 3H3VL 4A3KC 2NVYC 2E2HC 2NVXC 4A3LK 1YNJA 2B63C 3S1QC 3FKIK 5IP9C 3GTGC 1IW7A 4MQ9A 4AYBD 4Y7NC 4A3CK 1ZYRA 2B63K 4C2MC 3HOUC 3GTMC 3I4NC 3GTGK 5C4XK 3RZOK 3M4OK 1I3QC 1R9TC 3GTPC 4C2MK 4LK0A 1XPPA 2PMZD 5TMCA 2E2JC 3S14C 2JA8K 5IYDK 2R93K 2YU9C 3H0GC 4MEXA 4A3DK 3I4MK 3GTQK 3S2DC 1TWHC 5C3EK 2E2IK 4BY1C 4KMUA 3M3YK 1TWGC 2PA8D 2VUMK 5TMFA 1Y1WK 1I6HC 2A6EA 1Y1VC 3S15C 3S1RK 1TWGK 4LK1A 1K83K 4C3HC 1SFOC 3HOWC 4AYBL 4Y52K 5C44C 3HOXC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1YNN A;  2R92 C;  3PO2 C;  2A69 A;  4YFN A;  4OIR A;  4BXX C;  5D4D A;  5FJ8 K;  3S1M K;  2Y0S D;  4C3H K;  4G7H A;  3HOX K;  4A3K K;  2NVY K;  2E2H K;  2NVX K;  2YU9 K;  1TWA C;  3GTJ C;  4YG2 A;  4BXX K;  3HKZ D;  3S1Q K;  5IP9 K;  4QJV A;  2PMZ L;  1TWC C;  4Y7N K;  4BY7 C;  4A3J C;  2NVT C;  3GTO C;  3HOU K;  3EQL A;  4A93 C;  4A3M C;  3GTM K;  3I4N K;  2JA5 C;  2WB1 D;  4A3F C;  4QIW D;  1I3Q K;  4A3J K;  2NVQ C;  1R9T K;  5IYC C;  3GTP K;  2PA8 L;  4C3I C;  3CQZ C;  2BE5 A;  2E2J K;  3HOV C;  3S14 K;  1I50 C;  2CW0 A;  2JA7 C;  2R7Z C;  4BBR C;  1SMY A;  3HOY C;  4XLN A;  4OIN A;  3PO3 C;  3H0G K;  3S2D K;  1TWH K;  4MEY A;  4C3J C;  3S17 C;  4X6A C;  4BY1 K;  4NOI A;  3RZD C;  4Q4Z A;  4Q5S A;  4OIQ A;  2Y0S L;  3HOZ C;  4BBS K;  1I6H K;  5IYB C;  1Y1V K;  3S1N C;  5M3F K;  5IP7 C;  3S15 K;  5FLM C;  3HKZ L;  4OIP A;  4YFX A;  3S16 C;  5M5W K;  1SFO K;  3HOW K;  4XSX A;  4G7O A;  5C44 K;  4LLG A;  2R92 K;  4XLP A;  4A3G C;  1WCM C;  3PO2 K;  4A3B K;  4LJZ A;  4JK1 A;  2WB1 L;  3K7A C;  3GTK K;  1WCM K;  1TWA K;  4YFK A;  3GTJ K;  2JA6 C;  5C4J C;  1TWC K;  4BY7 K;  1TWF C;  4ZH4 A;  4A3E C;  2NVT K;  3GTO K;  2WAQ D;  4A93 K;  2PPB A;  3S2H C;  4A3M K;  2JA5 K;  2O5I A;  4A3F K;  4G7Z A;  4A3I C;  2O5J A;  4A3L C;  3GTL C;  2NVQ K;  5IYC K;  3FKI C;  4C3I K;  3CQZ K;  3HOV K;  4A3C C;  1I50 K;  2JA7 K;  3GTL K;  2R7Z K;  4BBR K;  3HOY K;  3PO3 K;  3DXJ A;  5C4X C;  3RZO C;  4C3J K;  3S17 K;  4X6A K;  3H3V D;  3M4O C;  1I6V A;  3RZD K;  2JA8 C;  3HOZ K;  4KN7 A;  5IYD C;  5M5Y K;  2R93 C;  5IYB K;  2A6H A;  3S1N K;  4A3D C;  5IP7 K;  5FLM K;  4XSZ A;  3GTQ C;  3I4M C;  5M3M K;  3S16 K;  5C3E C;  2E2I C;  4QIW L;  3M3Y C;  2WAQ L;  4A3G K;  2VUM C;  4GZY A;  1Y1W C;  3K7A K;  3S1R C;  2JA6 K;  1K83 C;  5C4J K;  3GTK C;  4OIO A;  4Y52 C;  1HQM A;  4A3B C;  4QJV B;  1TWF K;  3S1M C;  4A3E K;  4BBS C;  3WOD A;  4KN4 A;  2A68 A;  3S2H K;  5M5X K;  4A3I K;  1BDF A;  3H3V L;  4A3K C;  2NVY C;  2E2H C;  2NVX C;  4A3L K;  1YNJ A;  2B63 C;  3S1Q C;  3FKI K;  5IP9 C;  3GTG C;  1IW7 A;  4MQ9 A;  4AYB D;  4Y7N C;  4A3C K;  1ZYR A;  2B63 K;  4C2M C;  3HOU C;  3GTM C;  3I4N C;  3GTG K;  5C4X K;  3RZO K;  3M4O K;  1I3Q C;  1R9T C;  3GTP C;  4C2M K;  4LK0 A;  1XPP A;  2PMZ D;  5TMC A;  2E2J C;  3S14 C;  2JA8 K;  5IYD K;  2R93 K;  2YU9 C;  3H0G C;  4MEX A;  4A3D K;  3I4M K;  3GTQ K;  3S2D C;  1TWH C;  5C3E K;  2E2I K;  4BY1 C;  4KMU A;  3M3Y K;  1TWG C;  2PA8 D;  2VUM K;  5TMF A;  1Y1W K;  1I6H C;  2A6E A;  1Y1V C;  3S15 C;  3S1R K;  1TWG K;  4LK1 A;  1K83 K;  4C3H C;  1SFO C;  3HOW C;  4AYB L;  4Y52 K;  5C44 C;  3HOX C; 
#chains in the Genus database with same CATH topology
 1YNN A;  3S1M K;  4YFN A;  2L5N A;  4BXX C;  5D4D A;  2Y0S D;  4G7H A;  3BP8 C;  3HKZ D;  4KC6 A;  4PAA A;  2PMZ L;  4LQY A;  4Y7N K;  1XZQ A;  3GTO C;  4A93 C;  4A3M C;  1WCM A;  3GTJ A;  2WB1 D;  2XCQ A;  4RMF A;  2NVQ C;  2D6F C;  2PA8 L;  3A8K A;  4U67 S;  2CW0 A;  2R7Z C;  1BGW A;  4C3J C;  3S17 C;  4X6A C;  1JOE A;  4NOI A;  3RZD C;  4Q4Z A;  2EBB A;  3HOZ C;  1F7V A;  3S1N C;  5IOR A;  5FLM C;  5M5W K;  1SFO K;  4XSX A;  5C44 K;  3L4J A;  4LLG A;  1B4B A;  2CFA B;  3PO2 K;  1WCM C;  1O2F B;  3N3Y A;  1WOR A;  3K7A C;  4BKW A;  1TWC K;  2KQ1 A;  2NVT K;  2WAQ D;  3S2H C;  2JA5 K;  2O5I A;  3HXA A;  2V6T A;  3IPJ A;  4A3C C;  4P5B A;  3GTL K;  4AH6 A;  1ZBS A;  4BBR K;  3DXJ A;  3FKI A;  2ZJP S;  1JQW A;  4KMA A;  2B63 A;  1O26 A;  4KN7 A;  5IYB K;  3LAJ A;  3I4M C;  4KAR A;  2ZJR S;  4PAB A;  4GZY A;  1Y1W C;  3GTQ A;  2E2I A;  2JA6 K;  1K83 C;  5C4J K;  2PHC B;  4QJV B;  3S1M C;  1B4A A;  4KN4 A;  1TWG A;  5HL7 S;  3H3V L;  1XZP B;  4LR2 A;  1YNJ A;  2B63 C;  4MQ9 A;  4Y7N C;  1O27 A;  1O28 A;  3L4K A;  4C2M C;  5C4X K;  1WSV A;  5JVG S;  1UV7 A;  2PMZ D;  5IYD K;  2R93 K;  3BP3 A;  4A3D K;  1I3Q A;  5JVO A;  1TWG C;  2PA8 D;  2V6S A;  4GTD A;  5TMF A;  1USM A;  2A6E A;  2L3U A;  1SFO C;  4AYB L;  4Y52 K;  5C44 C;  3HOX C;  5FJ8 K;  3PO2 C;  2A69 A;  4OIR A;  3G4C A;  4FZB A;  4C3H K;  5DM7 S;  2NVY K;  2NVX K;  2V6U A;  4YG2 A;  5IP9 K;  1TWC C;  4GTA A;  2NVT C;  3EQL A;  3I4N K;  2JA5 C;  1DCH A;  5IOS A;  4QIW D;  1BS2 A;  4WCE S;  4A3J K;  5IOT A;  1WOO A;  3GTO A;  2BE5 A;  2E2J K;  1FEU A;  2YU9 K;  4BBR C;  3H0G K;  4WF9 S;  3S2D K;  1TWH K;  3GEE A;  2R7Z A;  3T01 A;  2GSN A;  5IYB C;  1Y1V K;  4GTF A;  4OIP A;  4GT9 A;  2R92 K;  4XLP A;  3QX3 A;  1YX2 A;  1F7U A;  1USO A;  2R93 A;  1TWA K;  2JA6 C;  5C4J C;  1XXB A;  3JST A;  1JVI A;  5JVH S;  5E68 A;  4G7Z A;  5IYC K;  3GEH A;  1DCO A;  3CQZ K;  3HOV K;  3S0X A;  1I50 K;  2JA7 K;  4ILD A;  3PIO S;  5C4X C;  4WJ3 M;  3H3V D;  1I6V A;  5IYD C;  1VH2 A;  2R93 C;  4A3D C;  5IP7 K;  3ORE A;  5M3M K;  3S16 K;  4QIW L;  4A3G K;  2GSO A;  3SZY A;  4KB2 A;  2ZFZ A;  1WQG A;  4Y52 C;  1WQH A;  2CFA A;  1TWH A;  1TWF K;  1C0A A;  4A3E K;  1Y1W A;  5M5X K;  2P8T A;  1K83 A;  2NVY C;  2NVX C;  3AD9 C;  5IP9 C;  4AYB D;  1O2A A;  2P5M A;  3I4N C;  3GTG K;  3AQO A;  3RZO K;  1EK8 A;  3M4O K;  4DDQ A;  1DD5 A;  4BLB A;  4G0U A;  2E2J C;  1INN A;  2YU9 C;  3H0G C;  3T00 A;  3S2D C;  1TWH C;  5C3E K;  3TTG A;  3M3Y K;  2VUM K;  2GAG C;  4KDD A;  1Y1V C;  2ZUF A;  3S1R K;  4LOW A;  2JA7 A;  4LK1 A;  3GTK K;  3GDZ A;  2R92 C;  4GTB A;  5HQH A;  3MML B;  3N0B A;  4KM9 A;  1SFO A;  3GSI A;  1TWA C;  4BXX K;  3S1Q K;  4M1X A;  4QJV A;  1F9N A;  2KXY A;  5L46 A;  3PIP S;  4GFQ A;  1ZVU A;  1XZP A;  4KAS A;  3SZZ A;  1TWC A;  4C45 A;  1R9T K;  3GTP K;  5IYC C;  3CQZ C;  2RH6 A;  3S14 K;  3HOV C;  2JA5 A;  1I50 C;  2JA7 C;  5TJ3 A;  4XLN A;  3AQP A;  1F93 A;  4Q5S A;  4OIQ A;  3GTL A;  4FM9 A;  3N0C A;  1IBA A;  5M3F K;  5IP7 C;  3S15 K;  3GEI A;  1O25 A;  1PJ6 A;  3S16 C;  3HOW K;  4GTE A;  1AB4 A;  4A3G C;  1J6V A;  1IE0 A;  2Y3P A;  1EQR A;  5CJ9 A;  4GTL A;  1WCM K;  3GTJ K;  1O24 A;  2W7V A;  4BY7 K;  1TWF C;  4ZH4 A;  5DM6 S;  4A3E C;  4A3F K;  2JA6 A;  4WFN S;  2O5J A;  3GTL C;  3ERE D;  3OPF A;  4KAT A;  1O29 A;  4C3I K;  2RGR A;  3HOY K;  3PO3 K;  3AD8 C;  3RZO C;  3M4O C;  5M5Y K;  4KMD A;  4IOA S;  4XSZ A;  1ZXO A;  5C3E C;  2FQO A;  1KQ4 A;  3M3Y C;  2VUM C;  2XCO A;  4IOC S;  3S1R C;  1EH1 A;  4KMH A;  3GTK C;  3CAG A;  1XZQ B;  2GSU A;  2A68 A;  4A3I K;  1BDF A;  4A3L K;  3S1Q C;  3FKI K;  1IW7 A;  2KWA A;  4WFB S;  2B63 K;  2NVY A;  2NVX A;  5EGE A;  1YCL A;  1R9T C;  3GTP C;  4C2M K;  4KB4 A;  1WIH A;  2JA8 K;  3S14 C;  3V4G A;  4MEX A;  3AD7 C;  1XXC A;  3GTQ K;  2E2I K;  1WSR A;  2YU9 A;  3H0G A;  1ISE A;  3FOF A;  3S15 C;  1TWG K;  1X31 C;  1HI9 A;  1PJ7 A;  4C3H C;  3HOW C;  4A3B K;  4KM8 A;  4BBS K;  1Y1V A;  2GAH C;  3HOX K;  3T02 A;  3VA7 A;  4A3K K;  2E2H K;  4G0V A;  3GTJ C;  1EI6 A;  1VGX A;  5JFE A;  2R92 A;  4BY7 C;  4BLA A;  1J6W A;  1O2B A;  4A3J C;  3HOU K;  3GTM K;  1TWA A;  1VRQ C;  4A3F C;  1I3Q K;  3TFH A;  4C3I C;  5EGH A;  5IOQ A;  1SMY A;  3HOY C;  3PO3 C;  4OIN A;  3GIR A;  4MEY A;  4BY1 K;  3LPX A;  3CQZ A;  1RU0 A;  3A8J A;  1I50 A;  2Y0S L;  3NUH A;  1I6H K;  3HKZ L;  4YFX A;  2XCR B;  2FQT A;  4G7O A;  1V5V A;  1EFW A;  4LJZ A;  4JK1 A;  2WB1 L;  4KAW X;  3CF5 S;  1ZQ1 C;  4YFK A;  1L0W A;  4P9S A;  3TFJ A;  3GTO K;  1IL2 A;  4A93 K;  2PPB A;  4A3M K;  4O2D A;  4A3I C;  1VLO A;  4A3L C;  2NVQ K;  1TWF A;  3FKI C;  1IQ0 A;  4WJ4 A;  3FHZ A;  1XXA A;  2R7Z K;  1IS1 A;  4C3J K;  3S17 K;  1PJ5 A;  4X6A K;  3TFI A;  3FOE A;  4J3N A;  3RZD K;  2E2H A;  2JA8 C;  3HOZ K;  1DCP A;  4GTC A;  3GTG A;  1J6X A;  2A6H A;  3S1N K;  5FLM K;  1WOP A;  3GTQ C;  3GTM A;  2E2I C;  3AH5 A;  2WAQ L;  1VJE A;  2ZUE A;  3K7A K;  1G51 A;  4OIO A;  3A8I A;  1HQM A;  4A3B C;  4G0W A;  2VUM A;  1GE9 A;  4BBS C;  3Q3Q A;  3WOD A;  4WIL A;  3S2H K;  3GTK A;  4A3K C;  2KPU A;  2E2H C;  5HL8 A;  2JH3 A;  3GTG C;  4A3C K;  1ZYR A;  4XCH A;  3HOU C;  3GTM C;  3G4A A;  1BJT A;  4WFA S;  1I3Q C;  3ADA C;  4LK0 A;  4P5A A;  5CHP A;  1XPP A;  5TMC A;  3OEP A;  3I4M K;  1R9T A;  3GTP A;  4IO9 S;  1J98 A;  4BY1 C;  1WOS A;  1WQF A;  4KMU A;  3DLL S;  3LAP A;  3BUE A;  2ZJQ S;  1Y1W K;  3LYW A;  1I6H C;  1K83 K; 
#chains in the Genus database with same CATH homology
 1YNN A;  2R92 C;  3PO2 C;  2A69 A;  4YFN A;  4OIR A;  4BXX C;  5D4D A;  5FJ8 K;  3S1M K;  2Y0S D;  4C3H K;  4G7H A;  3HOX K;  4A3K K;  2NVY K;  2E2H K;  2NVX K;  2YU9 K;  1TWA C;  3GTJ C;  4YG2 A;  4BXX K;  3HKZ D;  3S1Q K;  5IP9 K;  4QJV A;  2PMZ L;  1TWC C;  4Y7N K;  4BY7 C;  4A3J C;  2NVT C;  3GTO C;  3HOU K;  3EQL A;  4A93 C;  4A3M C;  3GTM K;  3I4N K;  2JA5 C;  2WB1 D;  4A3F C;  4QIW D;  1I3Q K;  4A3J K;  2NVQ C;  1R9T K;  5IYC C;  3GTP K;  2PA8 L;  4C3I C;  3CQZ C;  2BE5 A;  2E2J K;  3HOV C;  3S14 K;  1I50 C;  2CW0 A;  2JA7 C;  2R7Z C;  4BBR C;  1SMY A;  3HOY C;  4XLN A;  4OIN A;  3PO3 C;  3H0G K;  3S2D K;  1TWH K;  4MEY A;  4C3J C;  3S17 C;  4X6A C;  4BY1 K;  4NOI A;  3RZD C;  4Q4Z A;  4Q5S A;  4OIQ A;  2Y0S L;  3HOZ C;  4BBS K;  1I6H K;  5IYB C;  1Y1V K;  3S1N C;  5M3F K;  5IP7 C;  3S15 K;  5FLM C;  3HKZ L;  4OIP A;  4YFX A;  3S16 C;  5M5W K;  1SFO K;  3HOW K;  4XSX A;  4G7O A;  5C44 K;  4LLG A;  2R92 K;  4XLP A;  4A3G C;  1WCM C;  3PO2 K;  4A3B K;  4LJZ A;  4JK1 A;  2WB1 L;  3K7A C;  3GTK K;  1WCM K;  1TWA K;  4YFK A;  3GTJ K;  2JA6 C;  5C4J C;  1TWC K;  4BY7 K;  1TWF C;  4ZH4 A;  4A3E C;  2NVT K;  3GTO K;  2WAQ D;  4A93 K;  2PPB A;  3S2H C;  4A3M K;  2JA5 K;  2O5I A;  4A3F K;  4G7Z A;  4A3I C;  2O5J A;  4A3L C;  3GTL C;  2NVQ K;  5IYC K;  3FKI C;  4C3I K;  3CQZ K;  3HOV K;  4A3C C;  1I50 K;  2JA7 K;  3GTL K;  2R7Z K;  4BBR K;  3HOY K;  3PO3 K;  3DXJ A;  5C4X C;  3RZO C;  4C3J K;  3S17 K;  4X6A K;  3H3V D;  3M4O C;  1I6V A;  3RZD K;  2JA8 C;  3HOZ K;  4KN7 A;  5IYD C;  5M5Y K;  2R93 C;  5IYB K;  2A6H A;  3S1N K;  4A3D C;  5IP7 K;  5FLM K;  4XSZ A;  3GTQ C;  3I4M C;  5M3M K;  3S16 K;  5C3E C;  2E2I C;  4QIW L;  3M3Y C;  2WAQ L;  4A3G K;  2VUM C;  4GZY A;  1Y1W C;  3K7A K;  3S1R C;  2JA6 K;  1K83 C;  5C4J K;  3GTK C;  4OIO A;  4Y52 C;  1HQM A;  4A3B C;  4QJV B;  1TWF K;  3S1M C;  4A3E K;  4BBS C;  3WOD A;  4KN4 A;  2A68 A;  3S2H K;  5M5X K;  4A3I K;  1BDF A;  3H3V L;  4A3K C;  2NVY C;  2E2H C;  2NVX C;  4A3L K;  1YNJ A;  2B63 C;  3S1Q C;  3FKI K;  5IP9 C;  3GTG C;  1IW7 A;  4MQ9 A;  4AYB D;  4Y7N C;  4A3C K;  1ZYR A;  2B63 K;  4C2M C;  3HOU C;  3GTM C;  3I4N C;  3GTG K;  5C4X K;  3RZO K;  3M4O K;  1I3Q C;  1R9T C;  3GTP C;  4C2M K;  4LK0 A;  1XPP A;  2PMZ D;  5TMC A;  2E2J C;  3S14 C;  2JA8 K;  5IYD K;  2R93 K;  2YU9 C;  3H0G C;  4MEX A;  4A3D K;  3I4M K;  3GTQ K;  3S2D C;  1TWH C;  5C3E K;  2E2I K;  4BY1 C;  4KMU A;  3M3Y K;  1TWG C;  2PA8 D;  2VUM K;  5TMF A;  1Y1W K;  1I6H C;  2A6E A;  1Y1V C;  3S15 C;  3S1R K;  1TWG K;  4LK1 A;  1K83 K;  4C3H C;  1SFO C;  3HOW C;  4AYB L;  4Y52 K;  5C44 C;  3HOX C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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