4A3EC

Rna polymerase ii initial transcribing complex with a 5nt dna-rna hybrid and soaked with ampcpp
Total Genus 63
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
63
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transcription
molecule keywords DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1
publication title Structural basis of initial RNA polymerase II transcription.
pubmed doi rcsb
total genus 63
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-09-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 4a3eC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 4a3eC01
3H3VD 5TMFA 3HOZK 4A3CK 3S14C 1BDFA 1TWGC 3CQZC 4LK0A 4MEYA 3GTOC 3HOYK 3S2DK 5C4JK 4BY1C 2A6EA 1IW7A 3HOUK 1I3QK 3PO3C 4A3FC 1Y1VC 4X6AC 3HKZL 4A93K 4LK1A 2JA5C 3EQLA 2B63K 3GTPK 3GTQC 2PA8D 4QJVA 4BBSK 3S17K 5M3MK 4G7OA 5C3EC 3HOUC 1K83C 2NVQC 2NVYC 2Y0SL 4MEXA 3S14K 1TWGK 3CQZK 2WB1D 4BXXC 3GTOK 4Q5SA 4BY1K 1I6HC 4YFXA 2R7ZC 3I4NC 4G7HA 3PO3K 2NVXC 4A3FK 1Y1VK 4X6AK 5FLMC 3PO2C 2JA5K 1YNJA 3GTQK 4A3DC 4BY7C 1TWHC 2PMZD 2YU9C 5IYDC 1TWAC 3RZDC 4YG2A 5C3EK 5IP9C 3GTLC 1K83K 2NVYK 1SMYA 3HOWC 4A3LC 5M5WK 5M3FK 2NVQK 4KN4A 4OIQA 4KMUA 4YFKA 3HOVK 5FJ8K 4Y7NC 4BXXK 4OIOA 4Y52C 1I6HK 1TWFC 1HQMA 3I4NK 2R7ZK 2NVXK 1WCMC 3H3VL 2NVTC 4C3IC 5FLMK 3PO2K 3GTKC 3M3YC 4A3DK 4BY7K 2PPBA 1TWHK 2JA8C 2JA7C 2JA6C 2R92C 3HOVC 4A3KK 4A3EC 1TWAK 3RZDK 2YU9K 5IYDK 5IP9K 5TMCA 3GTLK 3HOWK 4A3LK 4A3IC 3GTGC 2PA8L 2A68A 4Y7NK 3GTJC 4Y52K 5D4DA 4QIWD 2O5IA 4AYBL 1ZYRA 1TWFK 3DXJA 4LJZA 4C3JC 4A3KC 1WCMK 2NVTK 4C3IK 2E2HC 3GTKK 3S1QC 3M3YK 4A3MC 4NOIA 4G7ZA 1YNNA 5IYCC 4C3HC 2JA8K 3GTMC 4A3GC 2JA7K 2JA6K 2R92K 2A69A 4A3EK 3H0GC 3S1NC 2WAQD 4XLNA 3S16C 4A3IK 3GTGK 3GTJK 5C4XC 2CW0A 3WODA 2VUMC 3K7AC 3S1MC 4C3JK 5M5XK 1I50C 4KN7A 3S2HC 2E2JC 4OIRA 4MQ9A 1Y1WC 3RZOC 5M5YK 5C44C 2E2HK 4C2MK 3S1QK 4A3JC 4A3MK 3HKZD 3FKIC 3I4MC 5IYCK 4JK1A 4XSXA 4LLGA 4C3HK 3HOXC 3GTMK 4A3GK 1TWCC 2E2IC 2R93C 3H0GK 4BBRC 4GZYA 1SFOC 3S1NK 3S16K 4XLPA 1R9TC 4A3BC 3S1RC 5IYBC 2Y0SD 4C2MC 5C4XK 2WB1L 3S15C 4YFNA 3K7AK 2VUMK 3S1MK 1I50K 3S2HK 4OIPA 3M4OC 2E2JK 5IP7C 1Y1WK 3RZOK 5C44K 2O5JA 4XSZA 1I6VA 3HOZC 2BE5A 4AYBD 4A3CC 3FKIK 4QIWL 4A3JK 3I4MK 3S2DC 3HOYC 3HOXK 1XPPA 5C4JC 1TWCK 2PMZL 2E2IK 1I3QC 4BBRK 2R93K 1SFOK 1R9TK 4A3BK 3S1RK 4A93C 4Q4ZA 4QJVB 2B63C 4OINA 3GTPC 5IYBK 4BBSC 3S17C 3S15K 2WAQL 2A6HA 4ZH4A 3M4OK 5IP7K
chains in the Genus database with same CATH superfamily
3H3VD 1TWFA 5TMFA 3HOZK 4A3CK 3S14C 3S2DK 1B4AA 3FOEA 2R92A 4GT9A 2W7VA 4PABA 4BBSK 1WOSA 1XXCA 5JVGS 1XZPA 4KC6A 3S14K 4G0UA 3I4NC 4G7HA 3T02A 1HI9A 4IOAS 4A3DC 4BY7C 4ILDA 2YU9C 3RZDC 1XXBA 1PJ7A 4KMUA 5FJ8K 4WFNS 1TWFC 3I4NK 3OEPA 1O2AA 2NVTC 1EFWA 1DCOA 3AH5A 1DCPA 4A3DK 2JH3A 4BY7K 4KARA 3CF5S 2R92C 2YU9K 3RZDK 5TMCA 2GSNA 2A68A 2L3UA 4WILA 2O5IA 4AYBL 1TWFK 3DXJA 4LJZA 4WJ4A 1F93A 2NVTK 4A3MC 2R92K 2GSOA 4WJ3M 2B63A 4LOWA 1O29A 2FQOA 3S1MC 1I50C 4KN7A 2E2JC 5HL7S 3QX3A 4A3MK 5IOSA 3HOXC 1IS1A 3LAJA 3DLLS 4BBRC 3TFHA 5TJ3A 5IYBC 1K83A 4P5AA 2FQTA 3S1MK 1GE9A 1I50K 2E2JK 2O5JA 1I6VA 4IOCS 2EBBA 3HOXK 5JVHS 1J6VA 4BBRK 3JSTA 1JOEA 4Q4ZA 2B63C 4OINA 2PHCB 5IYBK 1PJ5A 2ZJPS 4G0WA 4XSXA 4LLGA 1DD5A 1INNA 2KPUA 1BJTA 4GTFA 4LR2A 2VUMA 3PO3C 4KAWX 2JA6A 3HKZL 2B63K 1DCHA 5M3MK 5JVOA 1YX2A 5C3EC 1K83C 1SFOA 2NVYC 4IO9S 1WQFA 2Y0SL 3GEEA 1YCLA 1X31C 2WB1D 3LPXA 2E2HA 4KMAA 2R7ZC 3PO3K 2V6SA 5FLMC 1YNJA 3H0GA 3L4KA 5IYDC 3LAPA 1EI6A 4YG2A 5C3EK 5IP9C 1K83K 2NVYK 5M5WK 5IORA 4A3LC 3HOVK 1WIHA 4KB2A 1Y1WA 2R7ZK 3FKIA 3GDZA 4XCHA 5FLMK 2R93A 4P5BA 1JVIA 3CQZA 5HL8A 2JA8C 5EGHA 1R9TA 2JA7C 2JA6C 5IYDK 4FZBA 5IP9K 1VGXA 4A3LK 3LYWA 3GTGC 2PA8L 4C3JC 4A3KC 1ZVUA 2E2HC 1O26A 2V6UA 4WFBS 4G7ZA 1YNNA 3N3YA 4C3HC 2JA8K 1KQ4A 2JA6K 2JA7K 3GTPA 3FHZA 3H0GC 4XLNA 3GTGK 1TWHA 2CW0A 3WODA 5M5XK 4C3JK 4A3KK 3S2HC 5M5YK 4OIRA 1Y1WC 5C44C 2E2HK 2V6TA 4C2MK 3HKZD 3FKIC 1G51A 1Y1VA 4M1XA 4C3HK 1O28A 2R93C 3H0GK 3GTQA 3N0BA 3AQOA 1R9TC 1L0WA 2Y0SD 4BLBA 4KM8A 2WB1L 4YFNA 4GTAA 3S2HK 4OIPA 5IP7C 1Y1WK 5C44K 4XSZA 3BUEA 4C45A 1AB4A 3FKIK 1JQWA 3GSIA 5C4JC 3L4JA 2R93K 4J3NA 1R9TK 3VA7A 3GTPC 3GTLA 4GFQA 3S17C 2WAQL 2A6HA 5IP7K 4U67S 2CFAB 1BDFA 4MEYA 1J98A 5C4JK 4BY1C 2A6EA 3GTKA 4KM9A 1Y1VC 3EQLA 3GTPK 4DDQA 3GTQC 2PA8D 3S17K 1ISEA 1IL2A 2GAGC 3GTJA 1FEUA 1EK8A 1PJ6A 2ZFZA 4BKWA 3GEHA 3IPJA 4BXXC 2CFAA 4BY1K 1O24A 1WOOA 1Y1VK 2Y3PA 3TFIA 3ERED 3PO2C 1WORA 3GTQK 4GTBA 2PMZD 1EQRA 2RGRA 2ZJQS 1XZQB 3GTLC 1ZBSA 1SMYA 3HOWC 4BXXK 4Y52C 4GTEA 5CHPA 3PO2K 3GTKC 1TWCA 2PPBA 2GSUA 3BP8C 3HOVC 4A3EC 2P5MA 3AD7C 3MMLB 1F9NA 1USOA 3GTLK 3HOWK 1XZQA 4A3IC 1BS2A 3GTJC 4LQYA 4Y52K 5D4DA 4KATA 1ZYRA 1IBAA 3GTKK 3S1QC 1I3QA 4NOIA 3N0CA 4A3GC 2XCRB 4A3EK 1USMA 3S1NC 2WAQD 3S16C 4A3IK 3SZYA 3GTJK 2KQ1A 5C4XC 2L5NA 2VUMC 1F7UA 3K7AC 1TWGA 2ZJRS 3GTOA 4KB4A 3S1QK 4A3JC 4P9SA 1WQHA 4JK1A 3AD9C 4A3GK 2JA5A 1TWCC 3S1NK 4KMDA 1SFOC 3S16K 4XLPA 4A3BC 3GEIA 1VRQC 1C0AA 1IQ0A 3AD8C 1B4BA 4C2MC 5C4XK 2VUMK 1ZQ1C 3K7AK 1WOPA 3A8IA 3M4OC 1F7VA 1EH1A 4A3JK 4QIWL 2NVXA 3HOYC 2XCOA 1V5VA 1TWCK 2PMZL 1BGWA 1I3QC 3GIRA 1WSVA 1SFOK 4A3BK 4A93C 1O25A 3Q3QA 4QJVB 1TWAA 5IOQA 1O27A 3M4OK 1J6WA 4WF9S 1TWGC 3CQZC 4LK0A 1WCMA 1WQGA 3PIOS 3GTOC 3HOYK 3FOFA 1IW7A 1I3QK 1RU0A 1I50A 4A3FC 4X6AC 3A8KA 4A93K 4LK1A 2JA5C 5IOTA 5DM6S 4AH6A 4QJVA 4G7OA 2XCQA 3HOUC 4FM9A 2NVQC 4WFAS 4MEXA 1TWGK 3CQZK 2GAHC 5L46A 3GTOK 4Q5SA 3G4CA 1WSRA 1I6HC 4YFXA 2ZUFA 2NVXC 4A3FK 4X6AK 3GTMA 4BLAA 2JA5K 3A8JA 1VH2A 1TWHC 3G4AA 3V4GA 4G0VA 1TWAC 3HOUK 2NVQK 5M3FK 4KN4A 4OIQA 4YFKA 5JFEA 3TFJA 4Y7NC 4OIOA 1XXAA 5EGEA 1I6HK 1HQMA 1J6XA 2D6FC 2NVXK 1WCMC 3H3VL 4C3IC 3M3YC 2E2IA 1TWHK 3AQPA 4GTDA 3PIPS 4RMFA 3OPFA 1TWAK 1O2FB 4Y7NK 4QIWD 5E68A 3SZZA 4O2DA 1WCMK 1VJEA 5DM7S 2NVYA 4C3IK 3S0XA 4WCES 3M3YK 5IYCC 3GTMC 2A69A 3OREA 2R7ZA 3NUHA 4KASA 4KDDA 4MQ9A 3RZOC 2ZUEA 4GTCA 5IYCK 3I4MC 1O2BA 3GTMK 5CJ9A 2E2IC 4GZYA 2P8TA 3ADAC 4PAAA 1VLOA 3TTGA 3S1RC 2KWAA 2JA7A 3S15C 3RZOK 5HQHA 3GTGA 2RH6A 3HOZC 2BE5A 4AYBD 4A3CC 3CAGA 3I4MK 3S2DC 3T01A 1XPPA 2E2IK 1UV7A 1ZXOA 1IE0A 3HXAA 3T00A 3S1RK 2YU9A 2KXYA 4BBSC 4KMHA 1XZPB 3BP3A 4GTLA 3S15K 4ZH4A
chains in the Genus database with same CATH topology
3H3VD 5TMFA 3HOZK 4A3CK 3S14C 1BDFA 1TWGC 3CQZC 4LK0A 4MEYA 3GTOC 3HOYK 3S2DK 5C4JK 4BY1C 2A6EA 1IW7A 3HOUK 1I3QK 3PO3C 4A3FC 1Y1VC 4X6AC 3HKZL 4A93K 4LK1A 2JA5C 3EQLA 2B63K 3GTPK 3GTQC 2PA8D 4QJVA 4BBSK 3S17K 5M3MK 4G7OA 5C3EC 3HOUC 1K83C 2NVQC 2NVYC 2Y0SL 4MEXA 3S14K 1TWGK 3CQZK 2WB1D 4BXXC 3GTOK 4Q5SA 4BY1K 1I6HC 4YFXA 2R7ZC 3I4NC 4G7HA 3PO3K 2NVXC 4A3FK 1Y1VK 4X6AK 5FLMC 3PO2C 2JA5K 1YNJA 3GTQK 4A3DC 4BY7C 1TWHC 2PMZD 2YU9C 5IYDC 1TWAC 3RZDC 4YG2A 5C3EK 5IP9C 3GTLC 1K83K 2NVYK 1SMYA 3HOWC 4A3LC 5M5WK 5M3FK 2NVQK 4KN4A 4OIQA 4KMUA 4YFKA 3HOVK 5FJ8K 4Y7NC 4BXXK 4OIOA 4Y52C 1I6HK 1TWFC 1HQMA 3I4NK 2R7ZK 2NVXK 1WCMC 3H3VL 2NVTC 4C3IC 5FLMK 3PO2K 3GTKC 3M3YC 4A3DK 4BY7K 2PPBA 1TWHK 2JA8C 2JA7C 2JA6C 2R92C 3HOVC 4A3KK 4A3EC 1TWAK 3RZDK 2YU9K 5IYDK 5IP9K 5TMCA 3GTLK 3HOWK 4A3LK 4A3IC 3GTGC 2PA8L 2A68A 4Y7NK 3GTJC 4Y52K 5D4DA 4QIWD 2O5IA 4AYBL 1ZYRA 1TWFK 3DXJA 4LJZA 4C3JC 4A3KC 1WCMK 2NVTK 4C3IK 2E2HC 3GTKK 3S1QC 3M3YK 4A3MC 4NOIA 4G7ZA 1YNNA 5IYCC 4C3HC 2JA8K 3GTMC 4A3GC 2JA7K 2JA6K 2R92K 2A69A 4A3EK 3H0GC 3S1NC 2WAQD 4XLNA 3S16C 4A3IK 3GTGK 3GTJK 5C4XC 2CW0A 3WODA 2VUMC 3K7AC 3S1MC 4C3JK 5M5XK 1I50C 4KN7A 3S2HC 2E2JC 4OIRA 4MQ9A 1Y1WC 3RZOC 5M5YK 5C44C 2E2HK 4C2MK 3S1QK 4A3JC 4A3MK 3HKZD 3FKIC 3I4MC 5IYCK 4JK1A 4XSXA 4LLGA 4C3HK 3HOXC 3GTMK 4A3GK 1TWCC 2E2IC 2R93C 3H0GK 4BBRC 4GZYA 1SFOC 3S1NK 3S16K 4XLPA 1R9TC 4A3BC 3S1RC 5IYBC 2Y0SD 4C2MC 5C4XK 2WB1L 3S15C 4YFNA 3K7AK 2VUMK 3S1MK 1I50K 3S2HK 4OIPA 3M4OC 2E2JK 5IP7C 1Y1WK 3RZOK 5C44K 2O5JA 4XSZA 1I6VA 3HOZC 2BE5A 4AYBD 4A3CC 3FKIK 4QIWL 4A3JK 3I4MK 3S2DC 3HOYC 3HOXK 1XPPA 5C4JC 1TWCK 2PMZL 2E2IK 1I3QC 4BBRK 2R93K 1SFOK 1R9TK 4A3BK 3S1RK 4A93C 4Q4ZA 4QJVB 2B63C 4OINA 3GTPC 5IYBK 4BBSC 3S17C 3S15K 2WAQL 2A6HA 4ZH4A 3M4OK 5IP7K
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3H3V D;  5TMF A;  3HOZ K;  4A3C K;  3S14 C;  1BDF A;  1TWG C;  3CQZ C;  4LK0 A;  4MEY A;  3GTO C;  3HOY K;  3S2D K;  5C4J K;  4BY1 C;  2A6E A;  1IW7 A;  3HOU K;  1I3Q K;  3PO3 C;  4A3F C;  1Y1V C;  4X6A C;  3HKZ L;  4A93 K;  4LK1 A;  2JA5 C;  3EQL A;  2B63 K;  3GTP K;  3GTQ C;  2PA8 D;  4QJV A;  4BBS K;  3S17 K;  5M3M K;  4G7O A;  5C3E C;  3HOU C;  1K83 C;  2NVQ C;  2NVY C;  2Y0S L;  4MEX A;  3S14 K;  1TWG K;  3CQZ K;  2WB1 D;  4BXX C;  3GTO K;  4Q5S A;  4BY1 K;  1I6H C;  4YFX A;  2R7Z C;  3I4N C;  4G7H A;  3PO3 K;  2NVX C;  4A3F K;  1Y1V K;  4X6A K;  5FLM C;  3PO2 C;  2JA5 K;  1YNJ A;  3GTQ K;  4A3D C;  4BY7 C;  1TWH C;  2PMZ D;  2YU9 C;  5IYD C;  1TWA C;  3RZD C;  4YG2 A;  5C3E K;  5IP9 C;  3GTL C;  1K83 K;  2NVY K;  1SMY A;  3HOW C;  4A3L C;  5M5W K;  5M3F K;  2NVQ K;  4KN4 A;  4OIQ A;  4KMU A;  4YFK A;  3HOV K;  5FJ8 K;  4Y7N C;  4BXX K;  4OIO A;  4Y52 C;  1I6H K;  1TWF C;  1HQM A;  3I4N K;  2R7Z K;  2NVX K;  1WCM C;  3H3V L;  2NVT C;  4C3I C;  5FLM K;  3PO2 K;  3GTK C;  3M3Y C;  4A3D K;  4BY7 K;  2PPB A;  1TWH K;  2JA8 C;  2JA7 C;  2JA6 C;  2R92 C;  3HOV C;  4A3K K;  4A3E C;  1TWA K;  3RZD K;  2YU9 K;  5IYD K;  5IP9 K;  5TMC A;  3GTL K;  3HOW K;  4A3L K;  4A3I C;  3GTG C;  2PA8 L;  2A68 A;  4Y7N K;  3GTJ C;  4Y52 K;  5D4D A;  4QIW D;  2O5I A;  4AYB L;  1ZYR A;  1TWF K;  3DXJ A;  4LJZ A;  4C3J C;  4A3K C;  1WCM K;  2NVT K;  4C3I K;  2E2H C;  3GTK K;  3S1Q C;  3M3Y K;  4A3M C;  4NOI A;  4G7Z A;  1YNN A;  5IYC C;  4C3H C;  2JA8 K;  3GTM C;  4A3G C;  2JA7 K;  2JA6 K;  2R92 K;  2A69 A;  4A3E K;  3H0G C;  3S1N C;  2WAQ D;  4XLN A;  3S16 C;  4A3I K;  3GTG K;  3GTJ K;  5C4X C;  2CW0 A;  3WOD A;  2VUM C;  3K7A C;  3S1M C;  4C3J K;  5M5X K;  1I50 C;  4KN7 A;  3S2H C;  2E2J C;  4OIR A;  4MQ9 A;  1Y1W C;  3RZO C;  5M5Y K;  5C44 C;  2E2H K;  4C2M K;  3S1Q K;  4A3J C;  4A3M K;  3HKZ D;  3FKI C;  3I4M C;  5IYC K;  4JK1 A;  4XSX A;  4LLG A;  4C3H K;  3HOX C;  3GTM K;  4A3G K;  1TWC C;  2E2I C;  2R93 C;  3H0G K;  4BBR C;  4GZY A;  1SFO C;  3S1N K;  3S16 K;  4XLP A;  1R9T C;  4A3B C;  3S1R C;  5IYB C;  2Y0S D;  4C2M C;  5C4X K;  2WB1 L;  3S15 C;  4YFN A;  3K7A K;  2VUM K;  3S1M K;  1I50 K;  3S2H K;  4OIP A;  3M4O C;  2E2J K;  5IP7 C;  1Y1W K;  3RZO K;  5C44 K;  2O5J A;  4XSZ A;  1I6V A;  3HOZ C;  2BE5 A;  4AYB D;  4A3C C;  3FKI K;  4QIW L;  4A3J K;  3I4M K;  3S2D C;  3HOY C;  3HOX K;  1XPP A;  5C4J C;  1TWC K;  2PMZ L;  2E2I K;  1I3Q C;  4BBR K;  2R93 K;  1SFO K;  1R9T K;  4A3B K;  3S1R K;  4A93 C;  4Q4Z A;  4QJV B;  2B63 C;  4OIN A;  3GTP C;  5IYB K;  4BBS C;  3S17 C;  3S15 K;  2WAQ L;  2A6H A;  4ZH4 A;  3M4O K;  5IP7 K; 
#chains in the Genus database with same CATH topology
 3H3V D;  1TWF A;  5TMF A;  3HOZ K;  4A3C K;  3S14 C;  3S2D K;  1B4A A;  3FOE A;  2R92 A;  4GT9 A;  2W7V A;  4PAB A;  4BBS K;  1WOS A;  1XXC A;  5JVG S;  1XZP A;  4KC6 A;  3S14 K;  4G0U A;  3I4N C;  4G7H A;  3T02 A;  1HI9 A;  4IOA S;  4A3D C;  4BY7 C;  4ILD A;  2YU9 C;  3RZD C;  1XXB A;  1PJ7 A;  4KMU A;  5FJ8 K;  4WFN S;  1TWF C;  3I4N K;  3OEP A;  1O2A A;  2NVT C;  1EFW A;  1DCO A;  3AH5 A;  1DCP A;  4A3D K;  2JH3 A;  4BY7 K;  4KAR A;  3CF5 S;  2R92 C;  2YU9 K;  3RZD K;  5TMC A;  2GSN A;  2A68 A;  2L3U A;  4WIL A;  2O5I A;  4AYB L;  1TWF K;  3DXJ A;  4LJZ A;  4WJ4 A;  1F93 A;  2NVT K;  4A3M C;  2R92 K;  2GSO A;  4WJ3 M;  2B63 A;  4LOW A;  1O29 A;  2FQO A;  3S1M C;  1I50 C;  4KN7 A;  2E2J C;  5HL7 S;  3QX3 A;  4A3M K;  5IOS A;  3HOX C;  1IS1 A;  3LAJ A;  3DLL S;  4BBR C;  3TFH A;  5TJ3 A;  5IYB C;  1K83 A;  4P5A A;  2FQT A;  3S1M K;  1GE9 A;  1I50 K;  2E2J K;  2O5J A;  1I6V A;  4IOC S;  2EBB A;  3HOX K;  5JVH S;  1J6V A;  4BBR K;  3JST A;  1JOE A;  4Q4Z A;  2B63 C;  4OIN A;  2PHC B;  5IYB K;  1PJ5 A;  2ZJP S;  4G0W A;  4XSX A;  4LLG A;  1DD5 A;  1INN A;  2KPU A;  1BJT A;  4GTF A;  4LR2 A;  2VUM A;  3PO3 C;  4KAW X;  2JA6 A;  3HKZ L;  2B63 K;  1DCH A;  5M3M K;  5JVO A;  1YX2 A;  5C3E C;  1K83 C;  1SFO A;  2NVY C;  4IO9 S;  1WQF A;  2Y0S L;  3GEE A;  1YCL A;  1X31 C;  2WB1 D;  3LPX A;  2E2H A;  4KMA A;  2R7Z C;  3PO3 K;  2V6S A;  5FLM C;  1YNJ A;  3H0G A;  3L4K A;  5IYD C;  3LAP A;  1EI6 A;  4YG2 A;  5C3E K;  5IP9 C;  1K83 K;  2NVY K;  5M5W K;  5IOR A;  4A3L C;  3HOV K;  1WIH A;  4KB2 A;  1Y1W A;  2R7Z K;  3FKI A;  3GDZ A;  4XCH A;  5FLM K;  2R93 A;  4P5B A;  1JVI A;  3CQZ A;  5HL8 A;  2JA8 C;  5EGH A;  1R9T A;  2JA7 C;  2JA6 C;  5IYD K;  4FZB A;  5IP9 K;  1VGX A;  4A3L K;  3LYW A;  3GTG C;  2PA8 L;  4C3J C;  4A3K C;  1ZVU A;  2E2H C;  1O26 A;  2V6U A;  4WFB S;  4G7Z A;  1YNN A;  3N3Y A;  4C3H C;  2JA8 K;  1KQ4 A;  2JA6 K;  2JA7 K;  3GTP A;  3FHZ A;  3H0G C;  4XLN A;  3GTG K;  1TWH A;  2CW0 A;  3WOD A;  5M5X K;  4C3J K;  4A3K K;  3S2H C;  5M5Y K;  4OIR A;  1Y1W C;  5C44 C;  2E2H K;  2V6T A;  4C2M K;  3HKZ D;  3FKI C;  1G51 A;  1Y1V A;  4M1X A;  4C3H K;  1O28 A;  2R93 C;  3H0G K;  3GTQ A;  3N0B A;  3AQO A;  1R9T C;  1L0W A;  2Y0S D;  4BLB A;  4KM8 A;  2WB1 L;  4YFN A;  4GTA A;  3S2H K;  4OIP A;  5IP7 C;  1Y1W K;  5C44 K;  4XSZ A;  3BUE A;  4C45 A;  1AB4 A;  3FKI K;  1JQW A;  3GSI A;  5C4J C;  3L4J A;  2R93 K;  4J3N A;  1R9T K;  3VA7 A;  3GTP C;  3GTL A;  4GFQ A;  3S17 C;  2WAQ L;  2A6H A;  5IP7 K;  4U67 S;  2CFA B;  1BDF A;  4MEY A;  1J98 A;  5C4J K;  4BY1 C;  2A6E A;  3GTK A;  4KM9 A;  1Y1V C;  3EQL A;  3GTP K;  4DDQ A;  3GTQ C;  2PA8 D;  3S17 K;  1ISE A;  1IL2 A;  2GAG C;  3GTJ A;  1FEU A;  1EK8 A;  1PJ6 A;  2ZFZ A;  4BKW A;  3GEH A;  3IPJ A;  4BXX C;  2CFA A;  4BY1 K;  1O24 A;  1WOO A;  1Y1V K;  2Y3P A;  3TFI A;  3ERE D;  3PO2 C;  1WOR A;  3GTQ K;  4GTB A;  2PMZ D;  1EQR A;  2RGR A;  2ZJQ S;  1XZQ B;  3GTL C;  1ZBS A;  1SMY A;  3HOW C;  4BXX K;  4Y52 C;  4GTE A;  5CHP A;  3PO2 K;  3GTK C;  1TWC A;  2PPB A;  2GSU A;  3BP8 C;  3HOV C;  4A3E C;  2P5M A;  3AD7 C;  3MML B;  1F9N A;  1USO A;  3GTL K;  3HOW K;  1XZQ A;  4A3I C;  1BS2 A;  3GTJ C;  4LQY A;  4Y52 K;  5D4D A;  4KAT A;  1ZYR A;  1IBA A;  3GTK K;  3S1Q C;  1I3Q A;  4NOI A;  3N0C A;  4A3G C;  2XCR B;  4A3E K;  1USM A;  3S1N C;  2WAQ D;  3S16 C;  4A3I K;  3SZY A;  3GTJ K;  2KQ1 A;  5C4X C;  2L5N A;  2VUM C;  1F7U A;  3K7A C;  1TWG A;  2ZJR S;  3GTO A;  4KB4 A;  3S1Q K;  4A3J C;  4P9S A;  1WQH A;  4JK1 A;  3AD9 C;  4A3G K;  2JA5 A;  1TWC C;  3S1N K;  4KMD A;  1SFO C;  3S16 K;  4XLP A;  4A3B C;  3GEI A;  1VRQ C;  1C0A A;  1IQ0 A;  3AD8 C;  1B4B A;  4C2M C;  5C4X K;  2VUM K;  1ZQ1 C;  3K7A K;  1WOP A;  3A8I A;  3M4O C;  1F7V A;  1EH1 A;  4A3J K;  4QIW L;  2NVX A;  3HOY C;  2XCO A;  1V5V A;  1TWC K;  2PMZ L;  1BGW A;  1I3Q C;  3GIR A;  1WSV A;  1SFO K;  4A3B K;  4A93 C;  1O25 A;  3Q3Q A;  4QJV B;  1TWA A;  5IOQ A;  1O27 A;  3M4O K;  1J6W A;  4WF9 S;  1TWG C;  3CQZ C;  4LK0 A;  1WCM A;  1WQG A;  3PIO S;  3GTO C;  3HOY K;  3FOF A;  1IW7 A;  1I3Q K;  1RU0 A;  1I50 A;  4A3F C;  4X6A C;  3A8K A;  4A93 K;  4LK1 A;  2JA5 C;  5IOT A;  5DM6 S;  4AH6 A;  4QJV A;  4G7O A;  2XCQ A;  3HOU C;  4FM9 A;  2NVQ C;  4WFA S;  4MEX A;  1TWG K;  3CQZ K;  2GAH C;  5L46 A;  3GTO K;  4Q5S A;  3G4C A;  1WSR A;  1I6H C;  4YFX A;  2ZUF A;  2NVX C;  4A3F K;  4X6A K;  3GTM A;  4BLA A;  2JA5 K;  3A8J A;  1VH2 A;  1TWH C;  3G4A A;  3V4G A;  4G0V A;  1TWA C;  3HOU K;  2NVQ K;  5M3F K;  4KN4 A;  4OIQ A;  4YFK A;  5JFE A;  3TFJ A;  4Y7N C;  4OIO A;  1XXA A;  5EGE A;  1I6H K;  1HQM A;  1J6X A;  2D6F C;  2NVX K;  1WCM C;  3H3V L;  4C3I C;  3M3Y C;  2E2I A;  1TWH K;  3AQP A;  4GTD A;  3PIP S;  4RMF A;  3OPF A;  1TWA K;  1O2F B;  4Y7N K;  4QIW D;  5E68 A;  3SZZ A;  4O2D A;  1WCM K;  1VJE A;  5DM7 S;  2NVY A;  4C3I K;  3S0X A;  4WCE S;  3M3Y K;  5IYC C;  3GTM C;  2A69 A;  3ORE A;  2R7Z A;  3NUH A;  4KAS A;  4KDD A;  4MQ9 A;  3RZO C;  2ZUE A;  4GTC A;  5IYC K;  3I4M C;  1O2B A;  3GTM K;  5CJ9 A;  2E2I C;  4GZY A;  2P8T A;  3ADA C;  4PAA A;  1VLO A;  3TTG A;  3S1R C;  2KWA A;  2JA7 A;  3S15 C;  3RZO K;  5HQH A;  3GTG A;  2RH6 A;  3HOZ C;  2BE5 A;  4AYB D;  4A3C C;  3CAG A;  3I4M K;  3S2D C;  3T01 A;  1XPP A;  2E2I K;  1UV7 A;  1ZXO A;  1IE0 A;  3HXA A;  3T00 A;  3S1R K;  2YU9 A;  2KXY A;  4BBS C;  4KMH A;  1XZP B;  3BP3 A;  4GTL A;  3S15 K;  4ZH4 A; 
#chains in the Genus database with same CATH homology
 3H3V D;  5TMF A;  3HOZ K;  4A3C K;  3S14 C;  1BDF A;  1TWG C;  3CQZ C;  4LK0 A;  4MEY A;  3GTO C;  3HOY K;  3S2D K;  5C4J K;  4BY1 C;  2A6E A;  1IW7 A;  3HOU K;  1I3Q K;  3PO3 C;  4A3F C;  1Y1V C;  4X6A C;  3HKZ L;  4A93 K;  4LK1 A;  2JA5 C;  3EQL A;  2B63 K;  3GTP K;  3GTQ C;  2PA8 D;  4QJV A;  4BBS K;  3S17 K;  5M3M K;  4G7O A;  5C3E C;  3HOU C;  1K83 C;  2NVQ C;  2NVY C;  2Y0S L;  4MEX A;  3S14 K;  1TWG K;  3CQZ K;  2WB1 D;  4BXX C;  3GTO K;  4Q5S A;  4BY1 K;  1I6H C;  4YFX A;  2R7Z C;  3I4N C;  4G7H A;  3PO3 K;  2NVX C;  4A3F K;  1Y1V K;  4X6A K;  5FLM C;  3PO2 C;  2JA5 K;  1YNJ A;  3GTQ K;  4A3D C;  4BY7 C;  1TWH C;  2PMZ D;  2YU9 C;  5IYD C;  1TWA C;  3RZD C;  4YG2 A;  5C3E K;  5IP9 C;  3GTL C;  1K83 K;  2NVY K;  1SMY A;  3HOW C;  4A3L C;  5M5W K;  5M3F K;  2NVQ K;  4KN4 A;  4OIQ A;  4KMU A;  4YFK A;  3HOV K;  5FJ8 K;  4Y7N C;  4BXX K;  4OIO A;  4Y52 C;  1I6H K;  1TWF C;  1HQM A;  3I4N K;  2R7Z K;  2NVX K;  1WCM C;  3H3V L;  2NVT C;  4C3I C;  5FLM K;  3PO2 K;  3GTK C;  3M3Y C;  4A3D K;  4BY7 K;  2PPB A;  1TWH K;  2JA8 C;  2JA7 C;  2JA6 C;  2R92 C;  3HOV C;  4A3K K;  4A3E C;  1TWA K;  3RZD K;  2YU9 K;  5IYD K;  5IP9 K;  5TMC A;  3GTL K;  3HOW K;  4A3L K;  4A3I C;  3GTG C;  2PA8 L;  2A68 A;  4Y7N K;  3GTJ C;  4Y52 K;  5D4D A;  4QIW D;  2O5I A;  4AYB L;  1ZYR A;  1TWF K;  3DXJ A;  4LJZ A;  4C3J C;  4A3K C;  1WCM K;  2NVT K;  4C3I K;  2E2H C;  3GTK K;  3S1Q C;  3M3Y K;  4A3M C;  4NOI A;  4G7Z A;  1YNN A;  5IYC C;  4C3H C;  2JA8 K;  3GTM C;  4A3G C;  2JA7 K;  2JA6 K;  2R92 K;  2A69 A;  4A3E K;  3H0G C;  3S1N C;  2WAQ D;  4XLN A;  3S16 C;  4A3I K;  3GTG K;  3GTJ K;  5C4X C;  2CW0 A;  3WOD A;  2VUM C;  3K7A C;  3S1M C;  4C3J K;  5M5X K;  1I50 C;  4KN7 A;  3S2H C;  2E2J C;  4OIR A;  4MQ9 A;  1Y1W C;  3RZO C;  5M5Y K;  5C44 C;  2E2H K;  4C2M K;  3S1Q K;  4A3J C;  4A3M K;  3HKZ D;  3FKI C;  3I4M C;  5IYC K;  4JK1 A;  4XSX A;  4LLG A;  4C3H K;  3HOX C;  3GTM K;  4A3G K;  1TWC C;  2E2I C;  2R93 C;  3H0G K;  4BBR C;  4GZY A;  1SFO C;  3S1N K;  3S16 K;  4XLP A;  1R9T C;  4A3B C;  3S1R C;  5IYB C;  2Y0S D;  4C2M C;  5C4X K;  2WB1 L;  3S15 C;  4YFN A;  3K7A K;  2VUM K;  3S1M K;  1I50 K;  3S2H K;  4OIP A;  3M4O C;  2E2J K;  5IP7 C;  1Y1W K;  3RZO K;  5C44 K;  2O5J A;  4XSZ A;  1I6V A;  3HOZ C;  2BE5 A;  4AYB D;  4A3C C;  3FKI K;  4QIW L;  4A3J K;  3I4M K;  3S2D C;  3HOY C;  3HOX K;  1XPP A;  5C4J C;  1TWC K;  2PMZ L;  2E2I K;  1I3Q C;  4BBR K;  2R93 K;  1SFO K;  1R9T K;  4A3B K;  3S1R K;  4A93 C;  4Q4Z A;  4QJV B;  2B63 C;  4OIN A;  3GTP C;  5IYB K;  4BBS C;  3S17 C;  3S15 K;  2WAQ L;  2A6H A;  4ZH4 A;  3M4O K;  5IP7 K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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