4A3EC

Rna polymerase ii initial transcribing complex with a 5nt dna-rna hybrid and soaked with ampcpp
Total Genus 63
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
63
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1
publication title Structural basis of initial RNA polymerase II transcription.
pubmed doi rcsb
molecule tags Transcription
total genus 63
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-09-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 4a3eC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 4a3eC01
4Y7NC 4BBSC 1TWCC 5IYDK 3I4MC 1WCMC 4BY7K 3GTLC 5C3EC 3S1NC 2Y0SD 2Y0SL 2E2IK 3HOUC 4A93C 3S17K 5IP9K 5M5WK 2PMZD 2B63C 2PMZL 3RZDK 1R9TK 1I3QK 4AYBL 1TWAC 4C3IC 3S2HC 3PO2K 4OIRA 1TWFC 2PPBA 3GTKK 3S14K 5C4JC 3HOWC 1HQMA 3GTOK 5FLMC 1SMYA 1Y1WC 2JA5K 3DXJA 3HKZD 3HKZL 3HOVC 4G7HA 2WAQD 2WAQL 3I4NK 4LK0A 3S1QK 2CW0A 4MEXA 4XSZA 3PO3C 2O5JA 5IYCC 4Y52C 3S1RC 2NVQK 4YFKA 3HOZK 2BE5A 1I50C 3WODA 3S2DC 1XPPA 3H0GK 5IP7K 5M5XK 4A3GK 3GTJC 4A3MC 2JA7C 5M3FK 4LLGA 4A3FC 3GTQK 1Y1VC 1YNJA 3FKIC 3K7AC 4BXXC 5M3MK 5C44K 4JK1A 1BDFA 4BY1K 3S15K 4LJZA 1SFOC 5IYBC 4A3KK 2YU9K 3M4OC 2E2JK 2JA8K 2R7ZC 3GTPC 2R92K 4YFXA 2NVTC 1K83C 2NVXK 3GTMK 4A3BK 2WB1D 4A3LC 3HOXC 4OIQA 4A3IK 1TWGC 3S1MC 4A3JC 2A68A 4BBRC 4C2MC 4QJVA 3CQZK 4A3CC 2NVYC 4XSXA 4Q4ZA 1YNNA 4YFNA 4C3HK 2JA5C 4Y7NK 5M5YK 4QJVB 3GTGC 4OIOA 3RZOC 3S16C 4X6AC 4A3EC 5TMFA 1TWCK 2JA6C 5C4XC 4A3DC 1WCMK 3I4MK 3GTLK 5C3EK 3S1NK 2VUMC 4OINA 3HOUK 4A93K 3HOYC 1TWHC 2A6EA 3M3YC 4Q5SA 2R93C 2B63K 1TWAK 4OIPA 4YG2A 4C3JC 2E2HC 2E2JC 1I6HC 1TWFK 4C3IK 3S2HK 5C4JK 3HOWK 4KMUA 5FLMK 3EQLA 5IYDC 1Y1WK 4BY7C 4MEYA 5D4DA 1IW7A 2E2IC 4G7OA 1I6VA 3S17C 2WB1L 5IP9C 1R9TC 3RZDC 1I3QC 3PO2C 3PO3K 3S14C 3GTKC 5IYCK 3S1RK 4Y52K 1I50K 3GTOC 3S2DK 4XLPA 3GTJK 4A3MK 2JA7K 4LK1A 4A3FK 1Y1VK 3K7AK 3FKIK 4BXXK 3I4NC 3S1QC 1SFOK 5IYBK 4ZH4A 3M4OK 2O5IA 3GTPK 2R7ZK 2NVQC 2NVTK 3HOZC 5IP7C 1K83K 3H0GC 4A3GC 4A3LK 4QIWD 1ZYRA 4QIWL 3HOXK 4AYBD 1TWGK 3GTQC 3S1MK 4A3JK 4BBRK 4C2MK 4BBSK 5C44C 4A3CK 4BY1C 2A69A 3H3VD 3S15C 4MQ9A 4A3KC 2NVYK 3H3VL 2PA8D 2YU9C 2PA8L 2JA8C 4G7ZA 5FJ8K 3HOVK 2R92C 4NOIA 3GTGK 4GZYA 3GTMC 2NVXC 3RZOK 4A3EK 4A3BC 3S16K 5C4XK 2JA6K 4A3DK 4X6AK 4A3IC 2VUMK 4XLNA 4KN4A 3HOYK 1TWHK 5TMCA 3M3YK 3CQZC 2R93K 4KN7A 4C3JK 2A6HA 2E2HK 1I6HK 4C3HC
chains in the Genus database with same CATH superfamily
4BBSC 3I4MC 4BY7K 4KARA 2RH6A 2Y0SL 1J6WA 4WFNS 3CAGA 4A93C 4GTEA 1WIHA 2PMZD 1XXBA 3RZDK 3PO2K 3S14K 2PPBA 4KMHA 5C4JC 2L5NA 1SMYA 5HL8A 4PABA 3I4NK 2NVXA 3PO3C 2XCQA 4Y52C 3S1RC 4YFKA 3HOZK 3WODA 4P9SA 5M3MK 1YNJA 2EBBA 1BDFA 4BY1K 4GTDA 2R7ZC 4YFXA 2NVTC 2R7ZA 2NVXK 1DD5A 4A3BK 1TWAA 3HOXC 3LPXA 2A68A 4BBRC 1KQ4A 3LAJA 4A3CC 4YFNA 4C3HK 5IOSA 2JA5C 5M5YK 3S16C 3DLLS 5C3EK 5IOTA 3AQOA 4DDQA 1I50A 1TWAK 4C3IK 3AD9C 1RU0A 3HOWK 1XZQB 4KMUA 3EQLA 2GSOA 1J6VA 5JVHS 5JVOA 1USMA 3GTPA 1O29A 1I3QC 2D6FC 4WILA 1I3QA 1I50K 3GTOC 3AQPA 1WOPA 2NVYA 3GTOA 1JOEA 2RGRA 3T00A 3K7AK 4BXXK 1PJ5A 3S1QC 2O5IA 3GTPK 1F7UA 1INNA 5IP7C 2ZJQS 4KAWX 4QIWD 1O26A 3GTQC 4A3JK 2NVYK 3S15C 3G4CA 4GT9A 4A3KC 1L0WA 4PAAA 3TFJA 2R92C 4NOIA 3A8KA 3GTMC 4X6AK 4A3EK 1R9TA 5C4XK 4G0VA 3GTMA 5L46A 2V6SA 3GTKA 1WSRA 5IOQA 3HOYK 4FM9A 3M3YK 3CQZC 4C45A 4WCES 4C3JK 2A6HA 2E2JK 3OEPA 4Y7NC 5IYDK 1B4AA 1WCMC 4J3NA 4WJ4A 3JSTA 1WORA 5IP9K 1O25A 2B63C 2PMZL 5M5WK 1R9TK 4AYBL 3S2HC 2B63A 3GTKK 1O2BA 3T01A 1HQMA 1DCOA 1Y1WC 1JVIA 1XXAA 1ZQ1C 1VJEA 5CHPA 2CW0A 3N3YA 1BGWA 1JQWA 2KPUA 2NVQK 3S2DC 5M5XK 3H0GK 3GSIA 3GTJC 4A3MC 2CFAA 4A3FC 2P8TA 4IOCS 1SFOC 3M4OC 4KMDA 1EI6A 1G51A 2WB1D 5EGHA 4OIQA 4XSXA 1O2FB 1YCLA 4GTCA 1WQFA 3GTGC 4BBSK 3I4MK 2JA6C 1ZVUA 2XCRB 2VUMC 2JA6A 1O28A 1UV7A 1WOSA 4A93K 1PJ7A 3FOEA 3TFHA 4OIPA 2E2HC 4KM8A 5C4JK 3T02A 3BP3A 1IW7A 2E2IC 4G7OA 1X31C 3IPJA 4BLAA 3A8JA 3S17C 5EGEA 2E2IA 4LOWA 3PO3K 4Y52K 3S1RK 1VH2A 1WQGA 5HQHA 4LK1A 2GSNA 4KATA 1J6XA 2JA5A 3OREA 4U67S 4ZH4A 4GTLA 3L4JA 2R7ZK 1VRQC 2NVTK 4A3GC 4QIWL 3HOXK 1ZXOA 2JH3A 5HL7S 4BBRK 4KB4A 5C44C 4A3CK 2A69A 3H3VD 4MQ9A 3AH5A 2PA8D 2YU9C 4LR2A 2JA8C 4G7ZA 3HOVK 3PIOS 4GZYA 3CF5S 3S16K 4P5BA 4A3IC 4KN4A 3GDZA 2ZUFA 4WF9S 4M1XA 1TWCC 3AD8C 2V6UA 4GTBA 1EFWA 3GTLC 3S1NC 3HOUC 3GTLA 5JFEA 3GIRA 5IORA 4IOAS 1I3QK 1C0AA 1TWFC 3GTQA 3GTOK 5FLMC 1IE0A 4KASA 3HKZD 1F9NA 2R92A 1GE9A 2WAQD 4FZBA 4LK0A 3S1QK 1WOOA 4XSZA 5IYCC 1EK8A 4KDDA 1O27A 1XPPA 5DM6S 3CQZA 5IP7K 2JA7C 3GTQK 1Y1VC 3FKIC 3FHZA 3S15K 4LJZA 4A3KK 5IYBC 1WCMA 3NUHA 2R92K 4WFAS 2Y3PA 4LQYA 1K83C 3GTMK 4G0WA 4ILDA 4A3LC 1K83A 1TWGC 3S1MC 2FQTA 4XCHA 4C2MC 4QJVA 3CQZK 2KQ1A 5TJ3A 1Y1WA 3GEIA 3GEEA 4Y7NK 4QJVB 4OIOA 3RZOC 5E68A 1WCMK 4A3DC 1DCHA 4OINA 4P5AA 4BLBA 1TWHC 2A6EA 4Q5SA 2R93C 2B63K 3AD7C 3GTJA 3S2HK 4YG2A 1I6HC 3TFIA 4KMAA 1VGXA 2CFAB 2GAHC 1Y1WK 1SFOA 3PIPS 4BY7C 4MEYA 5D4DA 3FOFA 1I6VA 1IBAA 3RZDC 2ZJPS 3PO2C 3S14C 3L4KA 3S2DK 1ISEA 4XLPA 3GTJK 4A3MK 1O2AA 4A3FK 2FQOA 4GTAA 2PHCB 1WQHA 3I4NC 4RMFA 3GTGA 4WJ3M 1SFOK 4WFBS 3M4OK 3N0BA 2VUMA 4BKWA 3HOZC 1ZYRA 3N0CA 4AYBD 1B4BA 2E2HA 4BY1C 3H3VL 2PA8L 1J98A 3GTGK 2NVXC 1HI9A 4A3BC 2JA6K 2VUMK 4XLNA 5TMCA 2E2HK 4C3HC 1F93A 2W7VA 3SZYA 5C3EC 2Y0SD 2E2IK 3Q3QA 3LAPA 2ZUEA 3S17K 3MMLB 2GAGC 1TWAC 4C3IC 3LYWA 4OIRA 3HOWC 2P5MA 2ZJRS 4O2DA 1EQRA 2JA5K 3DXJA 2KWAA 2YU9A 3HKZL 3HOVC 4G7HA 2WAQL 1F7VA 2ZFZA 4MEXA 1IL2A 2O5JA 1YX2A 2BE5A 1I50C 1XZQA 4A3GK 5M3FK 3G4AA 4LLGA 4AH6A 3K7AC 4BXXC 1IQ0A 5C44K 4JK1A 1TWCA 4KC6A 3GEHA 2YU9K 2JA8K 3GTPC 4A3IK 2L3UA 3SZZA 1TWFA 2KXYA 4A3JC 3S0XA 3BUEA 2NVYC 4Q4ZA 1YNNA 1VLOA 3QX3A 1O24A 5CJ9A 1TWCK 4X6AC 4A3EC 5TMFA 5C4XC 3TTGA 3GTLK 3S1NK 2GSUA 3HOUK 3HOYC 3M3YC 4G0UA 2JA7A 4C3JC 2E2JC 3ERED 1TWFK 1Y1VA 3FKIA 4IO9S 5FLMK 5IYDC 1AB4A 4GFQA 4KM9A 1IS1A 2WB1L 5IP9C 1PJ6A 1FEUA 1R9TC 1EH1A 5IYCK 3GTKC 1TWGA 1DCPA 3ADAC 4KB2A 2JA7K 1WSVA 3BP8C 3A8IA 1Y1VK 3FKIK 5IYBK 1XXCA 3OPFA 1XZPA 1BJTA 2NVQC 5DM7S 1TWHA 1K83K 2R93A 3H0GC 4A3LK 3HXAA 3H0GA 1V5VA 1TWGK 1XZPB 3S1MK 5JVGS 4C2MK 1BS2A 5FJ8K 2XCOA 3RZOK 2V6TA 4A3DK 3V4GA 1ZBSA 1TWHK 2R93K 4KN7A 3VA7A 1I6HK 4GTFA 1USOA
chains in the Genus database with same CATH topology
4Y7NC 4BBSC 1TWCC 5IYDK 3I4MC 1WCMC 4BY7K 3GTLC 5C3EC 3S1NC 2Y0SD 2Y0SL 2E2IK 3HOUC 4A93C 3S17K 5IP9K 5M5WK 2PMZD 2B63C 2PMZL 3RZDK 1R9TK 1I3QK 4AYBL 1TWAC 4C3IC 3S2HC 3PO2K 4OIRA 1TWFC 2PPBA 3GTKK 3S14K 5C4JC 3HOWC 1HQMA 3GTOK 5FLMC 1SMYA 1Y1WC 2JA5K 3DXJA 3HKZD 3HKZL 3HOVC 4G7HA 2WAQD 2WAQL 3I4NK 4LK0A 3S1QK 2CW0A 4MEXA 4XSZA 3PO3C 2O5JA 5IYCC 4Y52C 3S1RC 2NVQK 4YFKA 3HOZK 2BE5A 1I50C 3WODA 3S2DC 1XPPA 3H0GK 5IP7K 5M5XK 4A3GK 3GTJC 4A3MC 2JA7C 5M3FK 4LLGA 4A3FC 3GTQK 1Y1VC 1YNJA 3FKIC 3K7AC 4BXXC 5M3MK 5C44K 4JK1A 1BDFA 4BY1K 3S15K 4LJZA 1SFOC 5IYBC 4A3KK 2YU9K 3M4OC 2E2JK 2JA8K 2R7ZC 3GTPC 2R92K 4YFXA 2NVTC 1K83C 2NVXK 3GTMK 4A3BK 2WB1D 4A3LC 3HOXC 4OIQA 4A3IK 1TWGC 3S1MC 4A3JC 2A68A 4BBRC 4C2MC 4QJVA 3CQZK 4A3CC 2NVYC 4XSXA 4Q4ZA 1YNNA 4YFNA 4C3HK 2JA5C 4Y7NK 5M5YK 4QJVB 3GTGC 4OIOA 3RZOC 3S16C 4X6AC 4A3EC 5TMFA 1TWCK 2JA6C 5C4XC 4A3DC 1WCMK 3I4MK 3GTLK 5C3EK 3S1NK 2VUMC 4OINA 3HOUK 4A93K 3HOYC 1TWHC 2A6EA 3M3YC 4Q5SA 2R93C 2B63K 1TWAK 4OIPA 4YG2A 4C3JC 2E2HC 2E2JC 1I6HC 1TWFK 4C3IK 3S2HK 5C4JK 3HOWK 4KMUA 5FLMK 3EQLA 5IYDC 1Y1WK 4BY7C 4MEYA 5D4DA 1IW7A 2E2IC 4G7OA 1I6VA 3S17C 2WB1L 5IP9C 1R9TC 3RZDC 1I3QC 3PO2C 3PO3K 3S14C 3GTKC 5IYCK 3S1RK 4Y52K 1I50K 3GTOC 3S2DK 4XLPA 3GTJK 4A3MK 2JA7K 4LK1A 4A3FK 1Y1VK 3K7AK 3FKIK 4BXXK 3I4NC 3S1QC 1SFOK 5IYBK 4ZH4A 3M4OK 2O5IA 3GTPK 2R7ZK 2NVQC 2NVTK 3HOZC 5IP7C 1K83K 3H0GC 4A3GC 4A3LK 4QIWD 1ZYRA 4QIWL 3HOXK 4AYBD 1TWGK 3GTQC 3S1MK 4A3JK 4BBRK 4C2MK 4BBSK 5C44C 4A3CK 4BY1C 2A69A 3H3VD 3S15C 4MQ9A 4A3KC 2NVYK 3H3VL 2PA8D 2YU9C 2PA8L 2JA8C 4G7ZA 5FJ8K 3HOVK 2R92C 4NOIA 3GTGK 4GZYA 3GTMC 2NVXC 3RZOK 4A3EK 4A3BC 3S16K 5C4XK 2JA6K 4A3DK 4X6AK 4A3IC 2VUMK 4XLNA 4KN4A 3HOYK 1TWHK 5TMCA 3M3YK 3CQZC 2R93K 4KN7A 4C3JK 2A6HA 2E2HK 1I6HK 4C3HC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4Y7N C;  4BBS C;  1TWC C;  5IYD K;  3I4M C;  1WCM C;  4BY7 K;  3GTL C;  5C3E C;  3S1N C;  2Y0S D;  2Y0S L;  2E2I K;  3HOU C;  4A93 C;  3S17 K;  5IP9 K;  5M5W K;  2PMZ D;  2B63 C;  2PMZ L;  3RZD K;  1R9T K;  1I3Q K;  4AYB L;  1TWA C;  4C3I C;  3S2H C;  3PO2 K;  4OIR A;  1TWF C;  2PPB A;  3GTK K;  3S14 K;  5C4J C;  3HOW C;  1HQM A;  3GTO K;  5FLM C;  1SMY A;  1Y1W C;  2JA5 K;  3DXJ A;  3HKZ D;  3HKZ L;  3HOV C;  4G7H A;  2WAQ D;  2WAQ L;  3I4N K;  4LK0 A;  3S1Q K;  2CW0 A;  4MEX A;  4XSZ A;  3PO3 C;  2O5J A;  5IYC C;  4Y52 C;  3S1R C;  2NVQ K;  4YFK A;  3HOZ K;  2BE5 A;  1I50 C;  3WOD A;  3S2D C;  1XPP A;  3H0G K;  5IP7 K;  5M5X K;  4A3G K;  3GTJ C;  4A3M C;  2JA7 C;  5M3F K;  4LLG A;  4A3F C;  3GTQ K;  1Y1V C;  1YNJ A;  3FKI C;  3K7A C;  4BXX C;  5M3M K;  5C44 K;  4JK1 A;  1BDF A;  4BY1 K;  3S15 K;  4LJZ A;  1SFO C;  5IYB C;  4A3K K;  2YU9 K;  3M4O C;  2E2J K;  2JA8 K;  2R7Z C;  3GTP C;  2R92 K;  4YFX A;  2NVT C;  1K83 C;  2NVX K;  3GTM K;  4A3B K;  2WB1 D;  4A3L C;  3HOX C;  4OIQ A;  4A3I K;  1TWG C;  3S1M C;  4A3J C;  2A68 A;  4BBR C;  4C2M C;  4QJV A;  3CQZ K;  4A3C C;  2NVY C;  4XSX A;  4Q4Z A;  1YNN A;  4YFN A;  4C3H K;  2JA5 C;  4Y7N K;  5M5Y K;  4QJV B;  3GTG C;  4OIO A;  3RZO C;  3S16 C;  4X6A C;  4A3E C;  5TMF A;  1TWC K;  2JA6 C;  5C4X C;  4A3D C;  1WCM K;  3I4M K;  3GTL K;  5C3E K;  3S1N K;  2VUM C;  4OIN A;  3HOU K;  4A93 K;  3HOY C;  1TWH C;  2A6E A;  3M3Y C;  4Q5S A;  2R93 C;  2B63 K;  1TWA K;  4OIP A;  4YG2 A;  4C3J C;  2E2H C;  2E2J C;  1I6H C;  1TWF K;  4C3I K;  3S2H K;  5C4J K;  3HOW K;  4KMU A;  5FLM K;  3EQL A;  5IYD C;  1Y1W K;  4BY7 C;  4MEY A;  5D4D A;  1IW7 A;  2E2I C;  4G7O A;  1I6V A;  3S17 C;  2WB1 L;  5IP9 C;  1R9T C;  3RZD C;  1I3Q C;  3PO2 C;  3PO3 K;  3S14 C;  3GTK C;  5IYC K;  3S1R K;  4Y52 K;  1I50 K;  3GTO C;  3S2D K;  4XLP A;  3GTJ K;  4A3M K;  2JA7 K;  4LK1 A;  4A3F K;  1Y1V K;  3K7A K;  3FKI K;  4BXX K;  3I4N C;  3S1Q C;  1SFO K;  5IYB K;  4ZH4 A;  3M4O K;  2O5I A;  3GTP K;  2R7Z K;  2NVQ C;  2NVT K;  3HOZ C;  5IP7 C;  1K83 K;  3H0G C;  4A3G C;  4A3L K;  4QIW D;  1ZYR A;  4QIW L;  3HOX K;  4AYB D;  1TWG K;  3GTQ C;  3S1M K;  4A3J K;  4BBR K;  4C2M K;  4BBS K;  5C44 C;  4A3C K;  4BY1 C;  2A69 A;  3H3V D;  3S15 C;  4MQ9 A;  4A3K C;  2NVY K;  3H3V L;  2PA8 D;  2YU9 C;  2PA8 L;  2JA8 C;  4G7Z A;  5FJ8 K;  3HOV K;  2R92 C;  4NOI A;  3GTG K;  4GZY A;  3GTM C;  2NVX C;  3RZO K;  4A3E K;  4A3B C;  3S16 K;  5C4X K;  2JA6 K;  4A3D K;  4X6A K;  4A3I C;  2VUM K;  4XLN A;  4KN4 A;  3HOY K;  1TWH K;  5TMC A;  3M3Y K;  3CQZ C;  2R93 K;  4KN7 A;  4C3J K;  2A6H A;  2E2H K;  1I6H K;  4C3H C; 
#chains in the Genus database with same CATH topology
 4BBS C;  3I4M C;  4BY7 K;  4KAR A;  2RH6 A;  2Y0S L;  1J6W A;  4WFN S;  3CAG A;  4A93 C;  4GTE A;  1WIH A;  2PMZ D;  1XXB A;  3RZD K;  3PO2 K;  3S14 K;  2PPB A;  4KMH A;  5C4J C;  2L5N A;  1SMY A;  5HL8 A;  4PAB A;  3I4N K;  2NVX A;  3PO3 C;  2XCQ A;  4Y52 C;  3S1R C;  4YFK A;  3HOZ K;  3WOD A;  4P9S A;  5M3M K;  1YNJ A;  2EBB A;  1BDF A;  4BY1 K;  4GTD A;  2R7Z C;  4YFX A;  2NVT C;  2R7Z A;  2NVX K;  1DD5 A;  4A3B K;  1TWA A;  3HOX C;  3LPX A;  2A68 A;  4BBR C;  1KQ4 A;  3LAJ A;  4A3C C;  4YFN A;  4C3H K;  5IOS A;  2JA5 C;  5M5Y K;  3S16 C;  3DLL S;  5C3E K;  5IOT A;  3AQO A;  4DDQ A;  1I50 A;  1TWA K;  4C3I K;  3AD9 C;  1RU0 A;  3HOW K;  1XZQ B;  4KMU A;  3EQL A;  2GSO A;  1J6V A;  5JVH S;  5JVO A;  1USM A;  3GTP A;  1O29 A;  1I3Q C;  2D6F C;  4WIL A;  1I3Q A;  1I50 K;  3GTO C;  3AQP A;  1WOP A;  2NVY A;  3GTO A;  1JOE A;  2RGR A;  3T00 A;  3K7A K;  4BXX K;  1PJ5 A;  3S1Q C;  2O5I A;  3GTP K;  1F7U A;  1INN A;  5IP7 C;  2ZJQ S;  4KAW X;  4QIW D;  1O26 A;  3GTQ C;  4A3J K;  2NVY K;  3S15 C;  3G4C A;  4GT9 A;  4A3K C;  1L0W A;  4PAA A;  3TFJ A;  2R92 C;  4NOI A;  3A8K A;  3GTM C;  4X6A K;  4A3E K;  1R9T A;  5C4X K;  4G0V A;  3GTM A;  5L46 A;  2V6S A;  3GTK A;  1WSR A;  5IOQ A;  3HOY K;  4FM9 A;  3M3Y K;  3CQZ C;  4C45 A;  4WCE S;  4C3J K;  2A6H A;  2E2J K;  3OEP A;  4Y7N C;  5IYD K;  1B4A A;  1WCM C;  4J3N A;  4WJ4 A;  3JST A;  1WOR A;  5IP9 K;  1O25 A;  2B63 C;  2PMZ L;  5M5W K;  1R9T K;  4AYB L;  3S2H C;  2B63 A;  3GTK K;  1O2B A;  3T01 A;  1HQM A;  1DCO A;  1Y1W C;  1JVI A;  1XXA A;  1ZQ1 C;  1VJE A;  5CHP A;  2CW0 A;  3N3Y A;  1BGW A;  1JQW A;  2KPU A;  2NVQ K;  3S2D C;  5M5X K;  3H0G K;  3GSI A;  3GTJ C;  4A3M C;  2CFA A;  4A3F C;  2P8T A;  4IOC S;  1SFO C;  3M4O C;  4KMD A;  1EI6 A;  1G51 A;  2WB1 D;  5EGH A;  4OIQ A;  4XSX A;  1O2F B;  1YCL A;  4GTC A;  1WQF A;  3GTG C;  4BBS K;  3I4M K;  2JA6 C;  1ZVU A;  2XCR B;  2VUM C;  2JA6 A;  1O28 A;  1UV7 A;  1WOS A;  4A93 K;  1PJ7 A;  3FOE A;  3TFH A;  4OIP A;  2E2H C;  4KM8 A;  5C4J K;  3T02 A;  3BP3 A;  1IW7 A;  2E2I C;  4G7O A;  1X31 C;  3IPJ A;  4BLA A;  3A8J A;  3S17 C;  5EGE A;  2E2I A;  4LOW A;  3PO3 K;  4Y52 K;  3S1R K;  1VH2 A;  1WQG A;  5HQH A;  4LK1 A;  2GSN A;  4KAT A;  1J6X A;  2JA5 A;  3ORE A;  4U67 S;  4ZH4 A;  4GTL A;  3L4J A;  2R7Z K;  1VRQ C;  2NVT K;  4A3G C;  4QIW L;  3HOX K;  1ZXO A;  2JH3 A;  5HL7 S;  4BBR K;  4KB4 A;  5C44 C;  4A3C K;  2A69 A;  3H3V D;  4MQ9 A;  3AH5 A;  2PA8 D;  2YU9 C;  4LR2 A;  2JA8 C;  4G7Z A;  3HOV K;  3PIO S;  4GZY A;  3CF5 S;  3S16 K;  4P5B A;  4A3I C;  4KN4 A;  3GDZ A;  2ZUF A;  4WF9 S;  4M1X A;  1TWC C;  3AD8 C;  2V6U A;  4GTB A;  1EFW A;  3GTL C;  3S1N C;  3HOU C;  3GTL A;  5JFE A;  3GIR A;  5IOR A;  4IOA S;  1I3Q K;  1C0A A;  1TWF C;  3GTQ A;  3GTO K;  5FLM C;  1IE0 A;  4KAS A;  3HKZ D;  1F9N A;  2R92 A;  1GE9 A;  2WAQ D;  4FZB A;  4LK0 A;  3S1Q K;  1WOO A;  4XSZ A;  5IYC C;  1EK8 A;  4KDD A;  1O27 A;  1XPP A;  5DM6 S;  3CQZ A;  5IP7 K;  2JA7 C;  3GTQ K;  1Y1V C;  3FKI C;  3FHZ A;  3S15 K;  4LJZ A;  4A3K K;  5IYB C;  1WCM A;  3NUH A;  2R92 K;  4WFA S;  2Y3P A;  4LQY A;  1K83 C;  3GTM K;  4G0W A;  4ILD A;  4A3L C;  1K83 A;  1TWG C;  3S1M C;  2FQT A;  4XCH A;  4C2M C;  4QJV A;  3CQZ K;  2KQ1 A;  5TJ3 A;  1Y1W A;  3GEI A;  3GEE A;  4Y7N K;  4QJV B;  4OIO A;  3RZO C;  5E68 A;  1WCM K;  4A3D C;  1DCH A;  4OIN A;  4P5A A;  4BLB A;  1TWH C;  2A6E A;  4Q5S A;  2R93 C;  2B63 K;  3AD7 C;  3GTJ A;  3S2H K;  4YG2 A;  1I6H C;  3TFI A;  4KMA A;  1VGX A;  2CFA B;  2GAH C;  1Y1W K;  1SFO A;  3PIP S;  4BY7 C;  4MEY A;  5D4D A;  3FOF A;  1I6V A;  1IBA A;  3RZD C;  2ZJP S;  3PO2 C;  3S14 C;  3L4K A;  3S2D K;  1ISE A;  4XLP A;  3GTJ K;  4A3M K;  1O2A A;  4A3F K;  2FQO A;  4GTA A;  2PHC B;  1WQH A;  3I4N C;  4RMF A;  3GTG A;  4WJ3 M;  1SFO K;  4WFB S;  3M4O K;  3N0B A;  2VUM A;  4BKW A;  3HOZ C;  1ZYR A;  3N0C A;  4AYB D;  1B4B A;  2E2H A;  4BY1 C;  3H3V L;  2PA8 L;  1J98 A;  3GTG K;  2NVX C;  1HI9 A;  4A3B C;  2JA6 K;  2VUM K;  4XLN A;  5TMC A;  2E2H K;  4C3H C;  1F93 A;  2W7V A;  3SZY A;  5C3E C;  2Y0S D;  2E2I K;  3Q3Q A;  3LAP A;  2ZUE A;  3S17 K;  3MML B;  2GAG C;  1TWA C;  4C3I C;  3LYW A;  4OIR A;  3HOW C;  2P5M A;  2ZJR S;  4O2D A;  1EQR A;  2JA5 K;  3DXJ A;  2KWA A;  2YU9 A;  3HKZ L;  3HOV C;  4G7H A;  2WAQ L;  1F7V A;  2ZFZ A;  4MEX A;  1IL2 A;  2O5J A;  1YX2 A;  2BE5 A;  1I50 C;  1XZQ A;  4A3G K;  5M3F K;  3G4A A;  4LLG A;  4AH6 A;  3K7A C;  4BXX C;  1IQ0 A;  5C44 K;  4JK1 A;  1TWC A;  4KC6 A;  3GEH A;  2YU9 K;  2JA8 K;  3GTP C;  4A3I K;  2L3U A;  3SZZ A;  1TWF A;  2KXY A;  4A3J C;  3S0X A;  3BUE A;  2NVY C;  4Q4Z A;  1YNN A;  1VLO A;  3QX3 A;  1O24 A;  5CJ9 A;  1TWC K;  4X6A C;  4A3E C;  5TMF A;  5C4X C;  3TTG A;  3GTL K;  3S1N K;  2GSU A;  3HOU K;  3HOY C;  3M3Y C;  4G0U A;  2JA7 A;  4C3J C;  2E2J C;  3ERE D;  1TWF K;  1Y1V A;  3FKI A;  4IO9 S;  5FLM K;  5IYD C;  1AB4 A;  4GFQ A;  4KM9 A;  1IS1 A;  2WB1 L;  5IP9 C;  1PJ6 A;  1FEU A;  1R9T C;  1EH1 A;  5IYC K;  3GTK C;  1TWG A;  1DCP A;  3ADA C;  4KB2 A;  2JA7 K;  1WSV A;  3BP8 C;  3A8I A;  1Y1V K;  3FKI K;  5IYB K;  1XXC A;  3OPF A;  1XZP A;  1BJT A;  2NVQ C;  5DM7 S;  1TWH A;  1K83 K;  2R93 A;  3H0G C;  4A3L K;  3HXA A;  3H0G A;  1V5V A;  1TWG K;  1XZP B;  3S1M K;  5JVG S;  4C2M K;  1BS2 A;  5FJ8 K;  2XCO A;  3RZO K;  2V6T A;  4A3D K;  3V4G A;  1ZBS A;  1TWH K;  2R93 K;  4KN7 A;  3VA7 A;  1I6H K;  4GTF A;  1USO A; 
#chains in the Genus database with same CATH homology
 4Y7N C;  4BBS C;  1TWC C;  5IYD K;  3I4M C;  1WCM C;  4BY7 K;  3GTL C;  5C3E C;  3S1N C;  2Y0S D;  2Y0S L;  2E2I K;  3HOU C;  4A93 C;  3S17 K;  5IP9 K;  5M5W K;  2PMZ D;  2B63 C;  2PMZ L;  3RZD K;  1R9T K;  1I3Q K;  4AYB L;  1TWA C;  4C3I C;  3S2H C;  3PO2 K;  4OIR A;  1TWF C;  2PPB A;  3GTK K;  3S14 K;  5C4J C;  3HOW C;  1HQM A;  3GTO K;  5FLM C;  1SMY A;  1Y1W C;  2JA5 K;  3DXJ A;  3HKZ D;  3HKZ L;  3HOV C;  4G7H A;  2WAQ D;  2WAQ L;  3I4N K;  4LK0 A;  3S1Q K;  2CW0 A;  4MEX A;  4XSZ A;  3PO3 C;  2O5J A;  5IYC C;  4Y52 C;  3S1R C;  2NVQ K;  4YFK A;  3HOZ K;  2BE5 A;  1I50 C;  3WOD A;  3S2D C;  1XPP A;  3H0G K;  5IP7 K;  5M5X K;  4A3G K;  3GTJ C;  4A3M C;  2JA7 C;  5M3F K;  4LLG A;  4A3F C;  3GTQ K;  1Y1V C;  1YNJ A;  3FKI C;  3K7A C;  4BXX C;  5M3M K;  5C44 K;  4JK1 A;  1BDF A;  4BY1 K;  3S15 K;  4LJZ A;  1SFO C;  5IYB C;  4A3K K;  2YU9 K;  3M4O C;  2E2J K;  2JA8 K;  2R7Z C;  3GTP C;  2R92 K;  4YFX A;  2NVT C;  1K83 C;  2NVX K;  3GTM K;  4A3B K;  2WB1 D;  4A3L C;  3HOX C;  4OIQ A;  4A3I K;  1TWG C;  3S1M C;  4A3J C;  2A68 A;  4BBR C;  4C2M C;  4QJV A;  3CQZ K;  4A3C C;  2NVY C;  4XSX A;  4Q4Z A;  1YNN A;  4YFN A;  4C3H K;  2JA5 C;  4Y7N K;  5M5Y K;  4QJV B;  3GTG C;  4OIO A;  3RZO C;  3S16 C;  4X6A C;  4A3E C;  5TMF A;  1TWC K;  2JA6 C;  5C4X C;  4A3D C;  1WCM K;  3I4M K;  3GTL K;  5C3E K;  3S1N K;  2VUM C;  4OIN A;  3HOU K;  4A93 K;  3HOY C;  1TWH C;  2A6E A;  3M3Y C;  4Q5S A;  2R93 C;  2B63 K;  1TWA K;  4OIP A;  4YG2 A;  4C3J C;  2E2H C;  2E2J C;  1I6H C;  1TWF K;  4C3I K;  3S2H K;  5C4J K;  3HOW K;  4KMU A;  5FLM K;  3EQL A;  5IYD C;  1Y1W K;  4BY7 C;  4MEY A;  5D4D A;  1IW7 A;  2E2I C;  4G7O A;  1I6V A;  3S17 C;  2WB1 L;  5IP9 C;  1R9T C;  3RZD C;  1I3Q C;  3PO2 C;  3PO3 K;  3S14 C;  3GTK C;  5IYC K;  3S1R K;  4Y52 K;  1I50 K;  3GTO C;  3S2D K;  4XLP A;  3GTJ K;  4A3M K;  2JA7 K;  4LK1 A;  4A3F K;  1Y1V K;  3K7A K;  3FKI K;  4BXX K;  3I4N C;  3S1Q C;  1SFO K;  5IYB K;  4ZH4 A;  3M4O K;  2O5I A;  3GTP K;  2R7Z K;  2NVQ C;  2NVT K;  3HOZ C;  5IP7 C;  1K83 K;  3H0G C;  4A3G C;  4A3L K;  4QIW D;  1ZYR A;  4QIW L;  3HOX K;  4AYB D;  1TWG K;  3GTQ C;  3S1M K;  4A3J K;  4BBR K;  4C2M K;  4BBS K;  5C44 C;  4A3C K;  4BY1 C;  2A69 A;  3H3V D;  3S15 C;  4MQ9 A;  4A3K C;  2NVY K;  3H3V L;  2PA8 D;  2YU9 C;  2PA8 L;  2JA8 C;  4G7Z A;  5FJ8 K;  3HOV K;  2R92 C;  4NOI A;  3GTG K;  4GZY A;  3GTM C;  2NVX C;  3RZO K;  4A3E K;  4A3B C;  3S16 K;  5C4X K;  2JA6 K;  4A3D K;  4X6A K;  4A3I C;  2VUM K;  4XLN A;  4KN4 A;  3HOY K;  1TWH K;  5TMC A;  3M3Y K;  3CQZ C;  2R93 K;  4KN7 A;  4C3J K;  2A6H A;  2E2H K;  1I6H K;  4C3H C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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