4A3EC

Rna polymerase ii initial transcribing complex with a 5nt dna-rna hybrid and soaked with ampcpp
Total Genus 63
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
63
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural basis of initial RNA polymerase II transcription.
pubmed doi rcsb
molecule tags Transcription
molecule keywords DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1
total genus 63
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-09-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 4a3eC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 4a3eC01
4X6AC 1Y1WK 4A3CK 4AYBL 2JA8C 4A3MC 3S1RC 3GTGC 3S1MK 3GTOK 4A3DC 4C3JK 3S1QK 4A3GK 3EQLA 1R9TC 2NVQC 4A3LK 1TWFC 4LK1A 2E2JC 1I3QK 4A3LC 2WAQD 5FJ8K 4YG2A 3HOZK 2JA5K 4A3EK 2PMZD 3PO2K 3S1QC 4A3DK 5TMCA 3S2DC 3S1NK 1I6HC 4YFKA 4MEXA 1TWFK 3HOXC 5IYBK 4G7ZA 5IP9C 3M3YC 1I50K 4Y52K 4A3IC 3PO3C 4C3JC 2NVXC 3GTPK 3GTKK 3HOUC 2CW0A 4A3MK 3DXJA 4A3CC 2YU9K 1YNJA 3RZDK 1SFOK 5TMFA 3GTKC 2NVXK 5C3EC 4BBSK 3PO3K 4QIWD 4A3IK 1IW7A 5D4DA 2A6HA 3CQZC 1I50C 2JA6C 3WODA 5IYBC 1TWHK 1TWCK 1Y1VK 2JA7K 4G7OA 3S15C 4X6AK 3M4OC 5C44K 4A3BC 2A68A 4OINA 3S1NC 1TWGK 2WB1L 3PO2C 4BXXC 3S2DK 4A3EC 3HOZC 4XSXA 4QJVB 4BBRK 4JK1A 3HOVC 4GZYA 2E2HC 4C3HK 4A3KC 2NVQK 1R9TK 5IYDK 2R7ZK 3H0GK 5C4JC 3GTOC 3GTJC 2R93K 2JA8K 3GTGK 3HKZL 5IP7K 5M5YK 3S16K 2E2IK 3HKZD 3H3VD 4MQ9A 4YFNA 2B63K 2O5IA 1K83K 1I6VA 4A3FC 2VUMK 4BY1K 2PA8D 4YFXA 5C4XC 4Q5SA 4NOIA 3I4MC 4Y7NC 5M5WK 3I4MK 4QIWL 4A93K 4A3JC 5FLMK 4LJZA 2Y0SL 3K7AK 3GTLC 2WB1D 2R92K 1WCMC 4QJVA 3HOYC 2PMZL 4C3IC 4KMUA 4C2MK 4XLPA 3GTQK 3S17C 1SMYA 1TWAC 1YNNA 3HOWK 4OIPA 5IP7C 2PPBA 2R93C 3FKIK 3RZDC 3HOWC 3S14C 1XPPA 2R7ZC 5IYDC 4C2MC 4ZH4A 4C3IK 3S14K 3HOYK 1HQMA 3FKIC 3RZOK 2A69A 4KN7A 5FLMC 4A3JK 4OIOA 4BBRC 4BY7C 3GTMC 3S2HC 4XSZA 5IYCC 1WCMK 5C44C 2NVTK 3M4OK 1BDFA 3S15K 3K7AC 1Y1VC 2NVTC 3I4NK 2JA6K 5IYCK 3CQZK 4Q4ZA 1K83C 3GTMK 4Y7NK 3S2HK 4BY7K 4BBSC 2E2IC 5M5XK 5C4XK 4OIRA 4KN4A 3RZOC 3HOUK 3GTPC 4G7HA 5C4JK 3H0GC 4MEYA 4Y52C 5IP9K 3M3YK 5M3FK 2BE5A 3S16C 3HOXK 1I6HK 2Y0SD 3HOVK 1ZYRA 3GTJK 1TWAK 3S17K 3GTQC 2WAQL 2JA5C 1SFOC 4LLGA 1TWGC 4C3HC 4A3KK 2R92C 2E2HK 1I3QC 2E2JK 3GTLK 4A3BK 1TWCC 4A93C 2A6EA 4BXXK 3H3VL 5C3EK 3S1MC 4AYBD 4A3GC 3S1RK 2YU9C 5M3MK 1Y1WC 2PA8L 1TWHC 2JA7C 4BY1C 4OIQA 2VUMC 3I4NC 2NVYK 4A3FK 2B63C 2O5JA 4LK0A 2NVYC 4XLNA
chains in the Genus database with same CATH superfamily
3TFIA 2NVXA 4AYBL 2JA8C 3GTGC 3S1RC 5IOSA 2NVQC 3JSTA 5FJ8K 3HOZK 2YU9A 4GTDA 4YFKA 4MEXA 3M3YC 4A3IC 1O2AA 2NVXC 3HOUC 1WOPA 1XXCA 1YNJA 2GSUA 1SFOK 2NVXK 3HXAA 3PO3K 3AD7C 4A3IK 2A6HA 1J6VA 2V6UA 5C44K 2D6FC 2A68A 3S1NC 3S2DK 4BXXC 4A3EC 4XSXA 4QJVB 1J98A 2JA6A 1O2FB 1WQFA 4A3KC 3QX3A 2NVQK 5IYDK 2XCOA 2R7ZK 3GTJC 2R93K 3HKZL 3G4AA 3HKZD 3H3VD 2KQ1A 2B63K 1K83K 3LAJA 2VUMK 3GEEA 3FOEA 3AQPA 4Q5SA 1BGWA 4NOIA 3AQOA 1IBAA 4LR2A 4RMFA 4C2MK 1WIHA 5IP7C 3OPFA 3S14C 1FEUA 3BP8C 5IYDC 5JVGS 5JFEA 1HQMA 4C45A 4OIOA 3M4OK 4U67S 1BDFA 1EFWA 1F7VA 3GSIA 1K83C 3S2HK 4Y7NK 5IORA 4BBSC 4M1XA 2V6SA 5C4XK 2R93A 3HOUK 2R7ZA 2V6TA 2XCQA 4G7HA 5C4JK 4FM9A 3CAGA 4MEYA 3M3YK 5M3FK 2BE5A 3S16C 1O28A 5HL8A 1XXBA 3S17K 3GTQC 4WF9S 4C3HC 5E68A 2R92C 4IOCS 2E2HK 3GTLK 2JA5A 3S1RK 1WOSA 5M3MK 1V5VA 1I3QA 3I4NC 3GIRA 4LK0A 4KMAA 4A3CK 1ZBSA 4A3GK 2ZJRS 1AB4A 5L46A 3GTKA 4WJ4A 3L4JA 1PJ7A 4GFQA 2E2JC 1I3QK 4WCES 1J6WA 4A3LC 2WAQD 4YG2A 2JA5K 5TMCA 3ERED 4G0VA 1ZXOA 5IYBK 2E2HA 4Y52K 1I50A 2L3UA 4C3JC 2CW0A 1O27A 4A3MK 3GTOA 1XZPA 2KXYA 3L4KA 3CQZC 1L0WA 1TWCK 3MMLB 4A3BC 1TWGK 2WB1L 3PO2C 1O2BA 4BBRK 3SZZA 4JK1A 4GZYA 1BS2A 1HI9A 3H0GK 1USOA 3S16K 5TJ3A 4MQ9A 4YFNA 2O5IA 1RU0A 4YFXA 3LYWA 1KQ4A 3N0CA 5M5WK 4GTEA 3TTGA 1DCOA 4GTCA 5FLMK 3GTLC 1VH2A 2R92K 4QJVA 3HOYC 2RGRA 4GTAA 3S17C 3FKIA 2Y3PA 5CHPA 1O26A 1XPPA 3GTMA 3AH5A 3FHZA 4ZH4A 1XXAA 2A69A 4KN7A 4A3JK 4BBRC 3S2HC 2ZJPS 5DM6S 1JOEA 2NVTK 3S15K 1Y1VC 1YX2A 2JA6K 5IYCK 3GTMK 1WSVA 4O2DA 4KN4A 5HL7S 2R92A 4Y52C 4AH6A 3HOXK 2E2IA 2KWAA 1SFOA 3BUEA 3GTGA 1F93A 1EK8A 4A3KK 1TWGC 4A3BK 1TWHA 2EBBA 1F7UA 4KB2A 1TWCC 4A93C 4BLBA 4BXXK 3TFHA 5C3EK 4A3GC 3PIOS 2ZJQS 5EGHA 2YU9C 3T00A 3H0GA 2JA7C 1WQHA 4OIQA 2VUMC 4KMHA 2B63C 4IOAS 1TWFA 2O5JA 2NVYC 3V4GA 2RH6A 1WOOA 3NUHA 3S1MK 4PABA 3EQLA 1TWGA 4A3LK 4LK1A 2CFAA 3T01A 4A3EK 3PIPS 3S1QC 4A3DK 3S2DC 3S1NK 1I6HC 2JH3A 4G7ZA 1I50K 2PHCB 2NVYA 3PO3C 1O29A 3GTPK 3GTJA 3DXJA 5TMFA 4LOWA 4BBSK 1IW7A 5D4DA 1I50C 2JA7K 3M4OC 2GSOA 4OINA 3HOZC 3HOVC 1F9NA 3CQZA 3GEIA 1XZPB 4GTLA 2FQOA 1O24A 1WCMA 3LPXA 5C4JC 3AD8C 1DCHA 2JA8K 3GTGK 1ZQ1C 2ZUEA 5IP7K 4KAWX 1BJTA 2E2IK 2ZUFA 1I6VA 3DLLS 4A3FC 4BY1K 2PA8D 3LAPA 3I4MC 1DD5A 1VGXA 3I4MK 4A93K 3K7AK 1WCMC 4C3IC 4KMUA 1J6XA 4XLPA 3N0BA 1EI6A 3A8KA 1SMYA 1TWAC 1YNNA 4OIPA 4GTBA 1XZQB 2R93C 2ZFZA 2R7ZC 4C2MC 1EQRA 4C3IK 3S0XA 1WSRA 3A8JA 4P5AA 3FKIC 3RZOK 1YCLA 3GTMC 5IYCC 1INNA 2GSNA 5C44C 1WORA 4LQYA 3AD9C 2NVTC 4BLAA 4KM9A 4BY7K 2E2IC 5M5XK 3CF5S 4ILDA 4WJ3M 3GTPC 1Y1VA 2L5NA 3FOFA 1I6HK 3BP3A 2Y0SD 3HOVK 1ZYRA 2WAQL 4FZBA 1C0AA 2JA7A 1GE9A 1X31C 2VUMA 1IQ0A 1K83A 3OREA 4J3NA 2A6EA 2FQTA 3H3VL 3S1MC 3GTPA 1XZQA 1TWHC 1VJEA 2NVYK 1JQWA 1TWCA 2P5MA 3ADAC 3RZDC 4XLNA 4X6AC 1Y1WK 4A3MC 1WQGA 1USMA 3VA7A 4A3DC 4C3JK 3GTOK 3S1QK 1Y1WA 4P5BA 1R9TC 3IPJA 1TWFC 1VRQC 4KARA 1ZVUA 2PMZD 1UV7A 3PO2K 4DDQA 1TWFK 1O25A 3HOXC 5IP9C 3GTKK 1PJ6A 1IS1A 4A3CC 2GAGC 2YU9K 3RZDK 3GTKC 5C3EC 4QIWD 4KDDA 2JA6C 3WODA 5IYBC 1TWHK 1Y1VK 1EH1A 4G7OA 3S15C 1JVIA 3GEHA 2E2HC 4C3HK 2XCRB 3GTLA 4G0UA 1R9TK 3GTOC 5EGEA 3N3YA 5M5YK 2P8TA 5C4XC 1TWAA 4Y7NC 2KPUA 4QIWL 5DM7S 4WFAS 4A3JC 4LJZA 2Y0SL 1PJ5A 2WB1D 4BKWA 2PMZL 4KATA 3GTQK 5IOTA 3HOWK 5JVHS 2PPBA 3FKIK 3HOWC 5IOQA 3OEPA 3S14K 3HOYK 2GAHC 5FLMC 4BY7C 4XSZA 4KB4A 1WCMK 3K7AC 3SZYA 4WFNS 4GTFA 4KASA 3T02A 3CQZK 4Q4ZA 1IL2A 2CFAB 1G51A 4OIRA 5HQHA 3RZOC 3GTQA 4G0WA 3H0GC 1ISEA 4GT9A 5IP9K 4WFBS 2B63A 1B4AA 2W7VA 3G4CA 3GTJK 1TWAK 2JA5C 1VLOA 3GDZA 3A8IA 4LLGA 4WILA 5CJ9A 3TFJA 1IE0A 1I3QC 2E2JK 4KC6A 4PAAA 1DCPA 4XCHA 3Q3QA 1B4BA 4P9SA 5JVOA 4AYBD 4KMDA 4KM8A 1Y1WC 2PA8L 4X6AK 4BY1C 1R9TA 4A3FK 3I4NK 4IO9S 1SFOC
chains in the Genus database with same CATH topology
4X6AC 1Y1WK 4A3CK 4AYBL 2JA8C 4A3MC 3S1RC 3GTGC 3S1MK 3GTOK 4A3DC 4C3JK 3S1QK 4A3GK 3EQLA 1R9TC 2NVQC 4A3LK 1TWFC 4LK1A 2E2JC 1I3QK 4A3LC 2WAQD 5FJ8K 4YG2A 3HOZK 2JA5K 4A3EK 2PMZD 3PO2K 3S1QC 4A3DK 5TMCA 3S2DC 3S1NK 1I6HC 4YFKA 4MEXA 1TWFK 3HOXC 5IYBK 4G7ZA 5IP9C 3M3YC 1I50K 4Y52K 4A3IC 3PO3C 4C3JC 2NVXC 3GTPK 3GTKK 3HOUC 2CW0A 4A3MK 3DXJA 4A3CC 2YU9K 1YNJA 3RZDK 1SFOK 5TMFA 3GTKC 2NVXK 5C3EC 4BBSK 3PO3K 4QIWD 4A3IK 1IW7A 5D4DA 2A6HA 3CQZC 1I50C 2JA6C 3WODA 5IYBC 1TWHK 1TWCK 1Y1VK 2JA7K 4G7OA 3S15C 4X6AK 3M4OC 5C44K 4A3BC 2A68A 4OINA 3S1NC 1TWGK 2WB1L 3PO2C 4BXXC 3S2DK 4A3EC 3HOZC 4XSXA 4QJVB 4BBRK 4JK1A 3HOVC 4GZYA 2E2HC 4C3HK 4A3KC 2NVQK 1R9TK 5IYDK 2R7ZK 3H0GK 5C4JC 3GTOC 3GTJC 2R93K 2JA8K 3GTGK 3HKZL 5IP7K 5M5YK 3S16K 2E2IK 3HKZD 3H3VD 4MQ9A 4YFNA 2B63K 2O5IA 1K83K 1I6VA 4A3FC 2VUMK 4BY1K 2PA8D 4YFXA 5C4XC 4Q5SA 4NOIA 3I4MC 4Y7NC 5M5WK 3I4MK 4QIWL 4A93K 4A3JC 5FLMK 4LJZA 2Y0SL 3K7AK 3GTLC 2WB1D 2R92K 1WCMC 4QJVA 3HOYC 2PMZL 4C3IC 4KMUA 4C2MK 4XLPA 3GTQK 3S17C 1SMYA 1TWAC 1YNNA 3HOWK 4OIPA 5IP7C 2PPBA 2R93C 3FKIK 3RZDC 3HOWC 3S14C 1XPPA 2R7ZC 5IYDC 4C2MC 4ZH4A 4C3IK 3S14K 3HOYK 1HQMA 3FKIC 3RZOK 2A69A 4KN7A 5FLMC 4A3JK 4OIOA 4BBRC 4BY7C 3GTMC 3S2HC 4XSZA 5IYCC 1WCMK 5C44C 2NVTK 3M4OK 1BDFA 3S15K 3K7AC 1Y1VC 2NVTC 3I4NK 2JA6K 5IYCK 3CQZK 4Q4ZA 1K83C 3GTMK 4Y7NK 3S2HK 4BY7K 4BBSC 2E2IC 5M5XK 5C4XK 4OIRA 4KN4A 3RZOC 3HOUK 3GTPC 4G7HA 5C4JK 3H0GC 4MEYA 4Y52C 5IP9K 3M3YK 5M3FK 2BE5A 3S16C 3HOXK 1I6HK 2Y0SD 3HOVK 1ZYRA 3GTJK 1TWAK 3S17K 3GTQC 2WAQL 2JA5C 1SFOC 4LLGA 1TWGC 4C3HC 4A3KK 2R92C 2E2HK 1I3QC 2E2JK 3GTLK 4A3BK 1TWCC 4A93C 2A6EA 4BXXK 3H3VL 5C3EK 3S1MC 4AYBD 4A3GC 3S1RK 2YU9C 5M3MK 1Y1WC 2PA8L 1TWHC 2JA7C 4BY1C 4OIQA 2VUMC 3I4NC 2NVYK 4A3FK 2B63C 2O5JA 4LK0A 2NVYC 4XLNA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4X6A C;  1Y1W K;  4A3C K;  4AYB L;  2JA8 C;  4A3M C;  3S1R C;  3GTG C;  3S1M K;  3GTO K;  4A3D C;  4C3J K;  3S1Q K;  4A3G K;  3EQL A;  1R9T C;  2NVQ C;  4A3L K;  1TWF C;  4LK1 A;  2E2J C;  1I3Q K;  4A3L C;  2WAQ D;  5FJ8 K;  4YG2 A;  3HOZ K;  2JA5 K;  4A3E K;  2PMZ D;  3PO2 K;  3S1Q C;  4A3D K;  5TMC A;  3S2D C;  3S1N K;  1I6H C;  4YFK A;  4MEX A;  1TWF K;  3HOX C;  5IYB K;  4G7Z A;  5IP9 C;  3M3Y C;  1I50 K;  4Y52 K;  4A3I C;  3PO3 C;  4C3J C;  2NVX C;  3GTP K;  3GTK K;  3HOU C;  2CW0 A;  4A3M K;  3DXJ A;  4A3C C;  2YU9 K;  1YNJ A;  3RZD K;  1SFO K;  5TMF A;  3GTK C;  2NVX K;  5C3E C;  4BBS K;  3PO3 K;  4QIW D;  4A3I K;  1IW7 A;  5D4D A;  2A6H A;  3CQZ C;  1I50 C;  2JA6 C;  3WOD A;  5IYB C;  1TWH K;  1TWC K;  1Y1V K;  2JA7 K;  4G7O A;  3S15 C;  4X6A K;  3M4O C;  5C44 K;  4A3B C;  2A68 A;  4OIN A;  3S1N C;  1TWG K;  2WB1 L;  3PO2 C;  4BXX C;  3S2D K;  4A3E C;  3HOZ C;  4XSX A;  4QJV B;  4BBR K;  4JK1 A;  3HOV C;  4GZY A;  2E2H C;  4C3H K;  4A3K C;  2NVQ K;  1R9T K;  5IYD K;  2R7Z K;  3H0G K;  5C4J C;  3GTO C;  3GTJ C;  2R93 K;  2JA8 K;  3GTG K;  3HKZ L;  5IP7 K;  5M5Y K;  3S16 K;  2E2I K;  3HKZ D;  3H3V D;  4MQ9 A;  4YFN A;  2B63 K;  2O5I A;  1K83 K;  1I6V A;  4A3F C;  2VUM K;  4BY1 K;  2PA8 D;  4YFX A;  5C4X C;  4Q5S A;  4NOI A;  3I4M C;  4Y7N C;  5M5W K;  3I4M K;  4QIW L;  4A93 K;  4A3J C;  5FLM K;  4LJZ A;  2Y0S L;  3K7A K;  3GTL C;  2WB1 D;  2R92 K;  1WCM C;  4QJV A;  3HOY C;  2PMZ L;  4C3I C;  4KMU A;  4C2M K;  4XLP A;  3GTQ K;  3S17 C;  1SMY A;  1TWA C;  1YNN A;  3HOW K;  4OIP A;  5IP7 C;  2PPB A;  2R93 C;  3FKI K;  3RZD C;  3HOW C;  3S14 C;  1XPP A;  2R7Z C;  5IYD C;  4C2M C;  4ZH4 A;  4C3I K;  3S14 K;  3HOY K;  1HQM A;  3FKI C;  3RZO K;  2A69 A;  4KN7 A;  5FLM C;  4A3J K;  4OIO A;  4BBR C;  4BY7 C;  3GTM C;  3S2H C;  4XSZ A;  5IYC C;  1WCM K;  5C44 C;  2NVT K;  3M4O K;  1BDF A;  3S15 K;  3K7A C;  1Y1V C;  2NVT C;  3I4N K;  2JA6 K;  5IYC K;  3CQZ K;  4Q4Z A;  1K83 C;  3GTM K;  4Y7N K;  3S2H K;  4BY7 K;  4BBS C;  2E2I C;  5M5X K;  5C4X K;  4OIR A;  4KN4 A;  3RZO C;  3HOU K;  3GTP C;  4G7H A;  5C4J K;  3H0G C;  4MEY A;  4Y52 C;  5IP9 K;  3M3Y K;  5M3F K;  2BE5 A;  3S16 C;  3HOX K;  1I6H K;  2Y0S D;  3HOV K;  1ZYR A;  3GTJ K;  1TWA K;  3S17 K;  3GTQ C;  2WAQ L;  2JA5 C;  1SFO C;  4LLG A;  1TWG C;  4C3H C;  4A3K K;  2R92 C;  2E2H K;  1I3Q C;  2E2J K;  3GTL K;  4A3B K;  1TWC C;  4A93 C;  2A6E A;  4BXX K;  3H3V L;  5C3E K;  3S1M C;  4AYB D;  4A3G C;  3S1R K;  2YU9 C;  5M3M K;  1Y1W C;  2PA8 L;  1TWH C;  2JA7 C;  4BY1 C;  4OIQ A;  2VUM C;  3I4N C;  2NVY K;  4A3F K;  2B63 C;  2O5J A;  4LK0 A;  2NVY C;  4XLN A; 
#chains in the Genus database with same CATH topology
 3TFI A;  2NVX A;  4AYB L;  2JA8 C;  3GTG C;  3S1R C;  5IOS A;  2NVQ C;  3JST A;  5FJ8 K;  3HOZ K;  2YU9 A;  4GTD A;  4YFK A;  4MEX A;  3M3Y C;  4A3I C;  1O2A A;  2NVX C;  3HOU C;  1WOP A;  1XXC A;  1YNJ A;  2GSU A;  1SFO K;  2NVX K;  3HXA A;  3PO3 K;  3AD7 C;  4A3I K;  2A6H A;  1J6V A;  2V6U A;  5C44 K;  2D6F C;  2A68 A;  3S1N C;  3S2D K;  4BXX C;  4A3E C;  4XSX A;  4QJV B;  1J98 A;  2JA6 A;  1O2F B;  1WQF A;  4A3K C;  3QX3 A;  2NVQ K;  5IYD K;  2XCO A;  2R7Z K;  3GTJ C;  2R93 K;  3HKZ L;  3G4A A;  3HKZ D;  3H3V D;  2KQ1 A;  2B63 K;  1K83 K;  3LAJ A;  2VUM K;  3GEE A;  3FOE A;  3AQP A;  4Q5S A;  1BGW A;  4NOI A;  3AQO A;  1IBA A;  4LR2 A;  4RMF A;  4C2M K;  1WIH A;  5IP7 C;  3OPF A;  3S14 C;  1FEU A;  3BP8 C;  5IYD C;  5JVG S;  5JFE A;  1HQM A;  4C45 A;  4OIO A;  3M4O K;  4U67 S;  1BDF A;  1EFW A;  1F7V A;  3GSI A;  1K83 C;  3S2H K;  4Y7N K;  5IOR A;  4BBS C;  4M1X A;  2V6S A;  5C4X K;  2R93 A;  3HOU K;  2R7Z A;  2V6T A;  2XCQ A;  4G7H A;  5C4J K;  4FM9 A;  3CAG A;  4MEY A;  3M3Y K;  5M3F K;  2BE5 A;  3S16 C;  1O28 A;  5HL8 A;  1XXB A;  3S17 K;  3GTQ C;  4WF9 S;  4C3H C;  5E68 A;  2R92 C;  4IOC S;  2E2H K;  3GTL K;  2JA5 A;  3S1R K;  1WOS A;  5M3M K;  1V5V A;  1I3Q A;  3I4N C;  3GIR A;  4LK0 A;  4KMA A;  4A3C K;  1ZBS A;  4A3G K;  2ZJR S;  1AB4 A;  5L46 A;  3GTK A;  4WJ4 A;  3L4J A;  1PJ7 A;  4GFQ A;  2E2J C;  1I3Q K;  4WCE S;  1J6W A;  4A3L C;  2WAQ D;  4YG2 A;  2JA5 K;  5TMC A;  3ERE D;  4G0V A;  1ZXO A;  5IYB K;  2E2H A;  4Y52 K;  1I50 A;  2L3U A;  4C3J C;  2CW0 A;  1O27 A;  4A3M K;  3GTO A;  1XZP A;  2KXY A;  3L4K A;  3CQZ C;  1L0W A;  1TWC K;  3MML B;  4A3B C;  1TWG K;  2WB1 L;  3PO2 C;  1O2B A;  4BBR K;  3SZZ A;  4JK1 A;  4GZY A;  1BS2 A;  1HI9 A;  3H0G K;  1USO A;  3S16 K;  5TJ3 A;  4MQ9 A;  4YFN A;  2O5I A;  1RU0 A;  4YFX A;  3LYW A;  1KQ4 A;  3N0C A;  5M5W K;  4GTE A;  3TTG A;  1DCO A;  4GTC A;  5FLM K;  3GTL C;  1VH2 A;  2R92 K;  4QJV A;  3HOY C;  2RGR A;  4GTA A;  3S17 C;  3FKI A;  2Y3P A;  5CHP A;  1O26 A;  1XPP A;  3GTM A;  3AH5 A;  3FHZ A;  4ZH4 A;  1XXA A;  2A69 A;  4KN7 A;  4A3J K;  4BBR C;  3S2H C;  2ZJP S;  5DM6 S;  1JOE A;  2NVT K;  3S15 K;  1Y1V C;  1YX2 A;  2JA6 K;  5IYC K;  3GTM K;  1WSV A;  4O2D A;  4KN4 A;  5HL7 S;  2R92 A;  4Y52 C;  4AH6 A;  3HOX K;  2E2I A;  2KWA A;  1SFO A;  3BUE A;  3GTG A;  1F93 A;  1EK8 A;  4A3K K;  1TWG C;  4A3B K;  1TWH A;  2EBB A;  1F7U A;  4KB2 A;  1TWC C;  4A93 C;  4BLB A;  4BXX K;  3TFH A;  5C3E K;  4A3G C;  3PIO S;  2ZJQ S;  5EGH A;  2YU9 C;  3T00 A;  3H0G A;  2JA7 C;  1WQH A;  4OIQ A;  2VUM C;  4KMH A;  2B63 C;  4IOA S;  1TWF A;  2O5J A;  2NVY C;  3V4G A;  2RH6 A;  1WOO A;  3NUH A;  3S1M K;  4PAB A;  3EQL A;  1TWG A;  4A3L K;  4LK1 A;  2CFA A;  3T01 A;  4A3E K;  3PIP S;  3S1Q C;  4A3D K;  3S2D C;  3S1N K;  1I6H C;  2JH3 A;  4G7Z A;  1I50 K;  2PHC B;  2NVY A;  3PO3 C;  1O29 A;  3GTP K;  3GTJ A;  3DXJ A;  5TMF A;  4LOW A;  4BBS K;  1IW7 A;  5D4D A;  1I50 C;  2JA7 K;  3M4O C;  2GSO A;  4OIN A;  3HOZ C;  3HOV C;  1F9N A;  3CQZ A;  3GEI A;  1XZP B;  4GTL A;  2FQO A;  1O24 A;  1WCM A;  3LPX A;  5C4J C;  3AD8 C;  1DCH A;  2JA8 K;  3GTG K;  1ZQ1 C;  2ZUE A;  5IP7 K;  4KAW X;  1BJT A;  2E2I K;  2ZUF A;  1I6V A;  3DLL S;  4A3F C;  4BY1 K;  2PA8 D;  3LAP A;  3I4M C;  1DD5 A;  1VGX A;  3I4M K;  4A93 K;  3K7A K;  1WCM C;  4C3I C;  4KMU A;  1J6X A;  4XLP A;  3N0B A;  1EI6 A;  3A8K A;  1SMY A;  1TWA C;  1YNN A;  4OIP A;  4GTB A;  1XZQ B;  2R93 C;  2ZFZ A;  2R7Z C;  4C2M C;  1EQR A;  4C3I K;  3S0X A;  1WSR A;  3A8J A;  4P5A A;  3FKI C;  3RZO K;  1YCL A;  3GTM C;  5IYC C;  1INN A;  2GSN A;  5C44 C;  1WOR A;  4LQY A;  3AD9 C;  2NVT C;  4BLA A;  4KM9 A;  4BY7 K;  2E2I C;  5M5X K;  3CF5 S;  4ILD A;  4WJ3 M;  3GTP C;  1Y1V A;  2L5N A;  3FOF A;  1I6H K;  3BP3 A;  2Y0S D;  3HOV K;  1ZYR A;  2WAQ L;  4FZB A;  1C0A A;  2JA7 A;  1GE9 A;  1X31 C;  2VUM A;  1IQ0 A;  1K83 A;  3ORE A;  4J3N A;  2A6E A;  2FQT A;  3H3V L;  3S1M C;  3GTP A;  1XZQ A;  1TWH C;  1VJE A;  2NVY K;  1JQW A;  1TWC A;  2P5M A;  3ADA C;  3RZD C;  4XLN A;  4X6A C;  1Y1W K;  4A3M C;  1WQG A;  1USM A;  3VA7 A;  4A3D C;  4C3J K;  3GTO K;  3S1Q K;  1Y1W A;  4P5B A;  1R9T C;  3IPJ A;  1TWF C;  1VRQ C;  4KAR A;  1ZVU A;  2PMZ D;  1UV7 A;  3PO2 K;  4DDQ A;  1TWF K;  1O25 A;  3HOX C;  5IP9 C;  3GTK K;  1PJ6 A;  1IS1 A;  4A3C C;  2GAG C;  2YU9 K;  3RZD K;  3GTK C;  5C3E C;  4QIW D;  4KDD A;  2JA6 C;  3WOD A;  5IYB C;  1TWH K;  1Y1V K;  1EH1 A;  4G7O A;  3S15 C;  1JVI A;  3GEH A;  2E2H C;  4C3H K;  2XCR B;  3GTL A;  4G0U A;  1R9T K;  3GTO C;  5EGE A;  3N3Y A;  5M5Y K;  2P8T A;  5C4X C;  1TWA A;  4Y7N C;  2KPU A;  4QIW L;  5DM7 S;  4WFA S;  4A3J C;  4LJZ A;  2Y0S L;  1PJ5 A;  2WB1 D;  4BKW A;  2PMZ L;  4KAT A;  3GTQ K;  5IOT A;  3HOW K;  5JVH S;  2PPB A;  3FKI K;  3HOW C;  5IOQ A;  3OEP A;  3S14 K;  3HOY K;  2GAH C;  5FLM C;  4BY7 C;  4XSZ A;  4KB4 A;  1WCM K;  3K7A C;  3SZY A;  4WFN S;  4GTF A;  4KAS A;  3T02 A;  3CQZ K;  4Q4Z A;  1IL2 A;  2CFA B;  1G51 A;  4OIR A;  5HQH A;  3RZO C;  3GTQ A;  4G0W A;  3H0G C;  1ISE A;  4GT9 A;  5IP9 K;  4WFB S;  2B63 A;  1B4A A;  2W7V A;  3G4C A;  3GTJ K;  1TWA K;  2JA5 C;  1VLO A;  3GDZ A;  3A8I A;  4LLG A;  4WIL A;  5CJ9 A;  3TFJ A;  1IE0 A;  1I3Q C;  2E2J K;  4KC6 A;  4PAA A;  1DCP A;  4XCH A;  3Q3Q A;  1B4B A;  4P9S A;  5JVO A;  4AYB D;  4KMD A;  4KM8 A;  1Y1W C;  2PA8 L;  4X6A K;  4BY1 C;  1R9T A;  4A3F K;  3I4N K;  4IO9 S;  1SFO C; 
#chains in the Genus database with same CATH homology
 4X6A C;  1Y1W K;  4A3C K;  4AYB L;  2JA8 C;  4A3M C;  3S1R C;  3GTG C;  3S1M K;  3GTO K;  4A3D C;  4C3J K;  3S1Q K;  4A3G K;  3EQL A;  1R9T C;  2NVQ C;  4A3L K;  1TWF C;  4LK1 A;  2E2J C;  1I3Q K;  4A3L C;  2WAQ D;  5FJ8 K;  4YG2 A;  3HOZ K;  2JA5 K;  4A3E K;  2PMZ D;  3PO2 K;  3S1Q C;  4A3D K;  5TMC A;  3S2D C;  3S1N K;  1I6H C;  4YFK A;  4MEX A;  1TWF K;  3HOX C;  5IYB K;  4G7Z A;  5IP9 C;  3M3Y C;  1I50 K;  4Y52 K;  4A3I C;  3PO3 C;  4C3J C;  2NVX C;  3GTP K;  3GTK K;  3HOU C;  2CW0 A;  4A3M K;  3DXJ A;  4A3C C;  2YU9 K;  1YNJ A;  3RZD K;  1SFO K;  5TMF A;  3GTK C;  2NVX K;  5C3E C;  4BBS K;  3PO3 K;  4QIW D;  4A3I K;  1IW7 A;  5D4D A;  2A6H A;  3CQZ C;  1I50 C;  2JA6 C;  3WOD A;  5IYB C;  1TWH K;  1TWC K;  1Y1V K;  2JA7 K;  4G7O A;  3S15 C;  4X6A K;  3M4O C;  5C44 K;  4A3B C;  2A68 A;  4OIN A;  3S1N C;  1TWG K;  2WB1 L;  3PO2 C;  4BXX C;  3S2D K;  4A3E C;  3HOZ C;  4XSX A;  4QJV B;  4BBR K;  4JK1 A;  3HOV C;  4GZY A;  2E2H C;  4C3H K;  4A3K C;  2NVQ K;  1R9T K;  5IYD K;  2R7Z K;  3H0G K;  5C4J C;  3GTO C;  3GTJ C;  2R93 K;  2JA8 K;  3GTG K;  3HKZ L;  5IP7 K;  5M5Y K;  3S16 K;  2E2I K;  3HKZ D;  3H3V D;  4MQ9 A;  4YFN A;  2B63 K;  2O5I A;  1K83 K;  1I6V A;  4A3F C;  2VUM K;  4BY1 K;  2PA8 D;  4YFX A;  5C4X C;  4Q5S A;  4NOI A;  3I4M C;  4Y7N C;  5M5W K;  3I4M K;  4QIW L;  4A93 K;  4A3J C;  5FLM K;  4LJZ A;  2Y0S L;  3K7A K;  3GTL C;  2WB1 D;  2R92 K;  1WCM C;  4QJV A;  3HOY C;  2PMZ L;  4C3I C;  4KMU A;  4C2M K;  4XLP A;  3GTQ K;  3S17 C;  1SMY A;  1TWA C;  1YNN A;  3HOW K;  4OIP A;  5IP7 C;  2PPB A;  2R93 C;  3FKI K;  3RZD C;  3HOW C;  3S14 C;  1XPP A;  2R7Z C;  5IYD C;  4C2M C;  4ZH4 A;  4C3I K;  3S14 K;  3HOY K;  1HQM A;  3FKI C;  3RZO K;  2A69 A;  4KN7 A;  5FLM C;  4A3J K;  4OIO A;  4BBR C;  4BY7 C;  3GTM C;  3S2H C;  4XSZ A;  5IYC C;  1WCM K;  5C44 C;  2NVT K;  3M4O K;  1BDF A;  3S15 K;  3K7A C;  1Y1V C;  2NVT C;  3I4N K;  2JA6 K;  5IYC K;  3CQZ K;  4Q4Z A;  1K83 C;  3GTM K;  4Y7N K;  3S2H K;  4BY7 K;  4BBS C;  2E2I C;  5M5X K;  5C4X K;  4OIR A;  4KN4 A;  3RZO C;  3HOU K;  3GTP C;  4G7H A;  5C4J K;  3H0G C;  4MEY A;  4Y52 C;  5IP9 K;  3M3Y K;  5M3F K;  2BE5 A;  3S16 C;  3HOX K;  1I6H K;  2Y0S D;  3HOV K;  1ZYR A;  3GTJ K;  1TWA K;  3S17 K;  3GTQ C;  2WAQ L;  2JA5 C;  1SFO C;  4LLG A;  1TWG C;  4C3H C;  4A3K K;  2R92 C;  2E2H K;  1I3Q C;  2E2J K;  3GTL K;  4A3B K;  1TWC C;  4A93 C;  2A6E A;  4BXX K;  3H3V L;  5C3E K;  3S1M C;  4AYB D;  4A3G C;  3S1R K;  2YU9 C;  5M3M K;  1Y1W C;  2PA8 L;  1TWH C;  2JA7 C;  4BY1 C;  4OIQ A;  2VUM C;  3I4N C;  2NVY K;  4A3F K;  2B63 C;  2O5J A;  4LK0 A;  2NVY C;  4XLN A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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