4X6AC

Crystal structure of yeast rna polymerase ii encountering oxidative cyclopurine dna lesions
Total Genus 48
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
48
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Mechanism of RNA polymerase II bypass of oxidative cyclopurine DNA lesions.
pubmed doi rcsb
molecule tags Transcription/dna
molecule keywords DNA-directed RNA polymerase II subunit RPB1
total genus 48
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2014-12-07

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 4x6aC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 4x6aC01
4KN7A 4A3LK 2A69A 4BXXC 2VUMC 1I6VA 4YFXA 2JA8C 4Y7NK 1TWHC 2E2IC 5FJ8K 3FKIC 3GTGK 1Y1WK 5IYCC 4BY7C 2B63K 4A93K 2JA7C 5C3EC 2E2HC 1I50C 5TMCA 2PA8D 3HKZD 1YNNA 4MEXA 2R7ZC 5M3FK 4A3LC 2NVTK 4AYBD 4A3KC 2VUMK 4A3BC 5TMFA 2O5JA 2PA8L 1TWHK 3WODA 3S2DC 4BXXK 1YNJA 4A3DC 4Y7NC 5FLMK 2PMZL 3FKIK 2JA8K 2E2IK 4QJVA 1BDFA 3GTLC 2NVTC 4Q5SA 3K7AC 4MQ9A 4OIOA 2B63C 2Y0SL 2PPBA 5IYCK 4BY7K 4OIPA 4A3DK 1Y1WC 4A3KK 5IP9K 3I4NC 3S17C 5FLMC 3RZDK 3GTPC 4Y52K 3HOYK 2JA5K 4A3BK 3PO2C 4C3IK 4C3JK 3EQLA 1WCMK 3I4MK 2R92C 3M4OK 2NVYC 2E2JK 4X6AK 5IYDC 5IP7K 4BBRK 3GTQK 3K7AK 5IYBC 4MEYA 4XSXA 4Y52C 1TWGC 4YFNA 4C3HC 5M5WK 3GTPK 4C3JC 4C2MC 2JA5C 1R9TC 5IP9C 3I4MC 4A3GC 5C4XC 3S17K 3HOWC 4G7ZA 3GTQC 3HOYC 2E2JC 4C3IC 1SMYA 4X6AC 5IYBK 4XSZA 5C3EK 2E2HK 4JK1A 1HQMA 1WCMC 3M4OC 1TWGK 2R92K 4LK0A 2R93C 5IP7C 2A6EA 4QJVB 5IYDK 3S2DK 1I50K 4C2MK 2R7ZK 3H3VL 4A3GK 4XLPA 4C3HK 3HOWK 3GTOK 2NVQC 4BY1K 2A68A 3GTJC 4A3FK 4BBSC 3H0GC 5C4XK 1R9TK 3GTLK 4LLGA 4NOIA 4A3EC 3S1RC 3S1NC 3HOZK 4A3CK 3GTMC 3RZOC 3CQZC 3S1MC 2O5IA 2JA6K 1IW7A 3HKZL 1TWCC 3RZDC 3M3YC 4A3FC 3HOXC 5D4DA 4OIRA 3GTKC 3GTOC 3S2HC 3S1RK 1SFOK 3S1NK 3GTGC 3GTJK 3H0GK 5C44C 3CQZK 4A3EK 3S1QC 4A3JK 4LJZA 4KMUA 5C4JK 2NVQK 3RZOK 1TWAC 1XPPA 4BBSK 4A3CC 2PMZD 3M3YK 2WAQD 3HOXK 3GTMK 1I3QK 3GTKK 3S2HK 4ZH4A 2JA6C 3S1MK 3H3VD 3S15C 2BE5A 4AYBL 3S1QK 5M3MK 1TWCK 2CW0A 4YG2A 4A3MK 1SFOC 3PO2K 2JA7K 1TWFK 1Y1VK 4G7OA 5C44K 3S14K 2R93K 3S16K 4OINA 5M5XK 3S15K 4A3IC 1K83K 1I6HC 4QIWD 3PO3C 1I3QC 4KN4A 2NVXC 2YU9C 4BY1C 1TWFC 1Y1VC 4QIWL 3HOVK 3S14C 3HOZC 2WB1D 3S16C 3HOUK 4A3MC 4YFKA 4LK1A 2WAQL 3I4NK 2NVXK 1K83C 2YU9K 1I6HK 4Q4ZA 5M5YK 2Y0SD 2WB1L 4A3IK 4A3JC 3PO3K 2NVYK 3HOUC 3DXJA 5C4JC 4A93C 4BBRC 4XLNA 1TWAK 4G7HA 3HOVC 1ZYRA 4OIQA 4GZYA 2A6HA
chains in the Genus database with same CATH superfamily
4GTFA 3NUHA 2EBBA 5EGHA 1VRQC 3IPJA 5FJ8K 5IYCC 1G51A 4GTEA 1K83A 3GDZA 4AYBD 1B4BA 2PA8L 3WODA 1O25A 5DM6S 2E2IK 3AQPA 3GEEA 2Y0SL 2B63C 1O26A 4A3KK 1GE9A 4WILA 3I4MK 3M4OK 2R92C 2E2JK 2P8TA 1XZPA 5IYBC 3LYWA 4XSXA 4YFNA 3I4MC 2JA5C 2GAGC 1EH1A 3V4GA 1JOEA 3HOWC 3N0CA 1Y1WA 4C3IC 5IYBK 4XSZA 1WCMC 4XCHA 3Q3QA 4LK0A 2A6EA 3BP8C 4A3GK 3GTOK 1O28A 2A68A 3A8IA 4BBSC 4A3CK 3S1RC 5E68A 3HOZK 4IO9S 3S1MC 2JA6K 1IW7A 1PJ6A 1TWCC 2P5MA 4WJ3M 3S1RK 3GTGC 4KARA 1WQGA 4A3JK 4LJZA 3RZOK 2NVQK 1XPPA 4DDQA 2CFAB 2PMZD 4GTLA 3S15C 5M3MK 4C45A 1O29A 2CFAA 2KWAA 5CHPA 3TFHA 4PAAA 1TWFK 1ZQ1C 3ERED 2ZJQS 1J6XA 2YU9A 5M5XK 3G4CA 4AH6A 4QIWD 1TWFC 3GTMA 1KQ4A 1F7VA 4GTCA 1O2AA 4LK1A 5IOQA 4Q4ZA 2JA6A 5M5YK 3PO3K 4WFNS 3HOUC 4XLNA 1L0WA 2VUMA 3HOVC 4A3DK 1FEUA 4KN7A 4GTDA 3TTGA 4IOCS 3N3YA 2VUMC 1I6VA 2KPUA 2JA8C 3MMLB 3CAGA 4BLAA 1Y1WK 4BY7C 4A93K 4ILDA 2JA7C 3CQZA 4GTBA 5TMCA 2NVTK 3HKZD 5JVHS 2VUMK 3PIOS 4A3BC 2O5JA 4BXXK 5JVGS 5FLMK 4Y7NC 4QJVA 2NVTC 4KM8A 3K7AC 1VJEA 2FQOA 1RU0A 3FOFA 1J6WA 3GTPC 4Y52K 4C3JK 3EQLA 3PIPS 2D6FC 5IYDC 3OPFA 4BBRK 5IP7K 4KATA 3GTQK 2E2IA 3TFJA 1F9NA 4Y52C 5HL8A 4C3HC 4P5AA 5IOTA 3GTQA 4C3JC 4C2MC 1R9TC 2L3UA 3A8JA 3GTQC 4X6AC 2XCQA 1INNA 1WSRA 3VA7A 5C3EK 4JK1A 1HQMA 3M4OC 2R92K 5TJ3A 4KM9A 1ZBSA 3AD8C 2RGRA 3H3VL 1USMA 1F7UA 3OREA 3TFIA 3GTJC 1WOPA 4A3EC 3S1NC 1BJTA 1WQHA 3CQZC 2JA7A 5L46A 5IOSA 2O5IA 4KMAA 4OIRA 5D4DA 1SFOK 2V6TA 3S1NK 3G4AA 3H0GK 5C44C 3AD9C 3CQZK 3S1QC 4KMUA 3GIRA 1EFWA 2JA5A 4BBSK 4A3CC 1WIHA 4LQYA 3GEIA 5HQHA 2JA6C 3S1MK 3H3VD 1DCOA 1ZXOA 3S1QK 1TWCK 4U67S 4G0VA 2JA7K 1VH2A 3S14K 3BUEA 4KB2A 2YU9C 3S14C 1PJ5A 3ADAC 3GTJA 2V6SA 4GTAA 2YU9K 1K83C 1TWFA 1I6HK 2FQTA 1WOSA 4BBRC 4WCES 1ZYRA 4FZBA 4GZYA 1R9TA 3GTGA 1F93A 1XZQB 3L4JA 4A3LK 3HXAA 4KAWX 1TWHC 2E2IC 3N0BA 2B63K 3GEHA 5C3EC 2KXYA 2PA8D 5M3FK 4A3LC 4A3KC 4BKWA 3GTPA 1TWHK 4A3DC 5HL7S 4KMHA 1BDFA 4MQ9A 5IYCK 4BLBA 1I3QA 4OIPA 1WCMA 1WQFA 5EGEA 3SZZA 1Y1WC 5IP9K 3I4NC 3S17C 1EI6A 1O2FB 2JA5K 3HOYK 3PO2C 4A3BK 3OEPA 1XZPB 3K7AK 1JQWA 4KASA 5M5WK 1EK8A 4A3GC 5C4XC 4G7ZA 1HI9A 4FM9A 2E2JC 2E2HK 2GSUA 3GTKA 2B63A 5IP7C 5IYDK 3S2DK 5IORA 2R92A 4C3HK 3HOWK 3CF5S 4GFQA 3GTLK 3GTGK 4A3FK 1R9TK 4NOIA 2ZJRS 2XCRB 1IL2A 1J6VA 3GTMC 3RZOC 3DLLS 3QX3A 3RZDC 4A3FC 2L5NA 3GTOC 1YCLA 4WJ4A 3BP3A 4WFAS 1O24A 1J98A 1USOA 4RMFA 1TWGA 2WAQD 1I3QK 2NVYA 1IE0A 4YG2A 3JSTA 1SFOC 1XXCA 4J3NA 4A3MK 1IBAA 1IQ0A 1XZQA 3S0XA 5C44K 2R93K 3S16K 4WF9S 2NVXA 1TWCA 2PHCB 4A3IC 3S15K 4WFBS 4BY1C 2W7VA 1DCPA 1IS1A 3S16C 3HOUK 5JFEA 5DM7S 1WOOA 4YFKA 2ZUEA 1B4AA 2WAQL 1ISEA 3T00A 3I4NK 2JH3A 1BGWA 1Y1VA 1O27A 2Y0SD 1VLOA 4A93C 5C4JC 1TWAK 4G7HA 2KQ1A 4OIQA 4KDDA 1O2BA 1I50K 2A6HA 2R7ZK 1WORA 4KMDA 2A69A 4BXXC 4Y7NK 4YFXA 2ZUFA 1DCHA 3FKIC 2E2HC 2GSOA 1I50C 2R7ZC 1PJ7A 5JVOA 1YNNA 4MEXA 1EQRA 3GSIA 1TWAA 3FHZA 5TMFA 3S2DC 1YNJA 2JA8K 2PMZL 2ZJPS 3FKIK 3LPXA 3GTLC 4Q5SA 4BY7K 4OIOA 2PPBA 3AD7C 4GT9A 3T02A 5FLMC 3H0GA 3RZDK 4C3IK 1XXAA 1WCMK 3AQOA 2NVYC 2XCOA 4KB4A 4X6AK 2R93A 4MEYA 1TWGC 2ZFZA 1AB4A 3GTPK 3AH5A 5IP9C 3T01A 3S17K 4LOWA 4G0WA 3HOYC 3PO2K 1SMYA 3GTOA 4P9SA 1TWGK 1YX2A 2R93C 4G0UA 4QJVB 4LR2A 3LAPA 4C2MK 4XLPA 2NVQC 4BY1K 1V5VA 3FOEA 3H0GC 5C4XK 4LLGA 2V6UA 3FKIA 3HKZL 3M3YC 3GTLA 3HOXC 3GTKC 3S2HC 3GTJK 4A3EK 2GAHC 5C4JK 1TWAC 4M1XA 3M3YK 1I50A 3SZYA 3HOXK 3GTMK 3GTKK 2RH6A 4O2DA 3S2HK 2E2HA 2R7ZA 4ZH4A 1C0AA 4P5BA 1DD5A 2BE5A 4AYBL 1XXBA 4IOAS 3L4KA 2CW0A 1JVIA 1VGXA 4KC6A 4PABA 1Y1VK 4G7OA 4OINA 2GSNA 1K83K 2Y3PA 3LAJA 1I6HC 3PO3C 1I3QC 4KN4A 2NVXC 1Y1VC 1WSVA 4QIWL 3HOVK 3HOZC 2WB1D 1BS2A 4A3MC 1SFOA 5CJ9A 1ZVUA 1X31C 2NVXK 2WB1L 4A3IK 4A3JC 1TWHA 3A8KA 2NVYK 3DXJA 1UV7A
chains in the Genus database with same CATH topology
4KN7A 4A3LK 2A69A 4BXXC 2VUMC 1I6VA 4YFXA 2JA8C 4Y7NK 1TWHC 2E2IC 5FJ8K 3FKIC 3GTGK 1Y1WK 5IYCC 4BY7C 2B63K 4A93K 2JA7C 5C3EC 2E2HC 1I50C 5TMCA 2PA8D 3HKZD 1YNNA 4MEXA 2R7ZC 5M3FK 4A3LC 2NVTK 4AYBD 4A3KC 2VUMK 4A3BC 5TMFA 2O5JA 2PA8L 1TWHK 3WODA 3S2DC 4BXXK 1YNJA 4A3DC 4Y7NC 5FLMK 2PMZL 3FKIK 2JA8K 2E2IK 4QJVA 1BDFA 3GTLC 2NVTC 4Q5SA 3K7AC 4MQ9A 4OIOA 2B63C 2Y0SL 2PPBA 5IYCK 4BY7K 4OIPA 4A3DK 1Y1WC 4A3KK 5IP9K 3I4NC 3S17C 5FLMC 3RZDK 3GTPC 4Y52K 3HOYK 2JA5K 4A3BK 3PO2C 4C3IK 4C3JK 3EQLA 1WCMK 3I4MK 2R92C 3M4OK 2NVYC 2E2JK 4X6AK 5IYDC 5IP7K 4BBRK 3GTQK 3K7AK 5IYBC 4MEYA 4XSXA 4Y52C 1TWGC 4YFNA 4C3HC 5M5WK 3GTPK 4C3JC 4C2MC 2JA5C 1R9TC 5IP9C 3I4MC 4A3GC 5C4XC 3S17K 3HOWC 4G7ZA 3GTQC 3HOYC 2E2JC 4C3IC 1SMYA 4X6AC 5IYBK 4XSZA 5C3EK 2E2HK 4JK1A 1HQMA 1WCMC 3M4OC 1TWGK 2R92K 4LK0A 2R93C 5IP7C 2A6EA 4QJVB 5IYDK 3S2DK 1I50K 4C2MK 2R7ZK 3H3VL 4A3GK 4XLPA 4C3HK 3HOWK 3GTOK 2NVQC 4BY1K 2A68A 3GTJC 4A3FK 4BBSC 3H0GC 5C4XK 1R9TK 3GTLK 4LLGA 4NOIA 4A3EC 3S1RC 3S1NC 3HOZK 4A3CK 3GTMC 3RZOC 3CQZC 3S1MC 2O5IA 2JA6K 1IW7A 3HKZL 1TWCC 3RZDC 3M3YC 4A3FC 3HOXC 5D4DA 4OIRA 3GTKC 3GTOC 3S2HC 3S1RK 1SFOK 3S1NK 3GTGC 3GTJK 3H0GK 5C44C 3CQZK 4A3EK 3S1QC 4A3JK 4LJZA 4KMUA 5C4JK 2NVQK 3RZOK 1TWAC 1XPPA 4BBSK 4A3CC 2PMZD 3M3YK 2WAQD 3HOXK 3GTMK 1I3QK 3GTKK 3S2HK 4ZH4A 2JA6C 3S1MK 3H3VD 3S15C 2BE5A 4AYBL 3S1QK 5M3MK 1TWCK 2CW0A 4YG2A 4A3MK 1SFOC 3PO2K 2JA7K 1TWFK 1Y1VK 4G7OA 5C44K 3S14K 2R93K 3S16K 4OINA 5M5XK 3S15K 4A3IC 1K83K 1I6HC 4QIWD 3PO3C 1I3QC 4KN4A 2NVXC 2YU9C 4BY1C 1TWFC 1Y1VC 4QIWL 3HOVK 3S14C 3HOZC 2WB1D 3S16C 3HOUK 4A3MC 4YFKA 4LK1A 2WAQL 3I4NK 2NVXK 1K83C 2YU9K 1I6HK 4Q4ZA 5M5YK 2Y0SD 2WB1L 4A3IK 4A3JC 3PO3K 2NVYK 3HOUC 3DXJA 5C4JC 4A93C 4BBRC 4XLNA 1TWAK 4G7HA 3HOVC 1ZYRA 4OIQA 4GZYA 2A6HA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4KN7 A;  4A3L K;  2A69 A;  4BXX C;  2VUM C;  1I6V A;  4YFX A;  2JA8 C;  4Y7N K;  1TWH C;  2E2I C;  5FJ8 K;  3FKI C;  3GTG K;  1Y1W K;  5IYC C;  4BY7 C;  2B63 K;  4A93 K;  2JA7 C;  5C3E C;  2E2H C;  1I50 C;  5TMC A;  2PA8 D;  3HKZ D;  1YNN A;  4MEX A;  2R7Z C;  5M3F K;  4A3L C;  2NVT K;  4AYB D;  4A3K C;  2VUM K;  4A3B C;  5TMF A;  2O5J A;  2PA8 L;  1TWH K;  3WOD A;  3S2D C;  4BXX K;  1YNJ A;  4A3D C;  4Y7N C;  5FLM K;  2PMZ L;  3FKI K;  2JA8 K;  2E2I K;  4QJV A;  1BDF A;  3GTL C;  2NVT C;  4Q5S A;  3K7A C;  4MQ9 A;  4OIO A;  2B63 C;  2Y0S L;  2PPB A;  5IYC K;  4BY7 K;  4OIP A;  4A3D K;  1Y1W C;  4A3K K;  5IP9 K;  3I4N C;  3S17 C;  5FLM C;  3RZD K;  3GTP C;  4Y52 K;  3HOY K;  2JA5 K;  4A3B K;  3PO2 C;  4C3I K;  4C3J K;  3EQL A;  1WCM K;  3I4M K;  2R92 C;  3M4O K;  2NVY C;  2E2J K;  4X6A K;  5IYD C;  5IP7 K;  4BBR K;  3GTQ K;  3K7A K;  5IYB C;  4MEY A;  4XSX A;  4Y52 C;  1TWG C;  4YFN A;  4C3H C;  5M5W K;  3GTP K;  4C3J C;  4C2M C;  2JA5 C;  1R9T C;  5IP9 C;  3I4M C;  4A3G C;  5C4X C;  3S17 K;  3HOW C;  4G7Z A;  3GTQ C;  3HOY C;  2E2J C;  4C3I C;  1SMY A;  4X6A C;  5IYB K;  4XSZ A;  5C3E K;  2E2H K;  4JK1 A;  1HQM A;  1WCM C;  3M4O C;  1TWG K;  2R92 K;  4LK0 A;  2R93 C;  5IP7 C;  2A6E A;  4QJV B;  5IYD K;  3S2D K;  1I50 K;  4C2M K;  2R7Z K;  3H3V L;  4A3G K;  4XLP A;  4C3H K;  3HOW K;  3GTO K;  2NVQ C;  4BY1 K;  2A68 A;  3GTJ C;  4A3F K;  4BBS C;  3H0G C;  5C4X K;  1R9T K;  3GTL K;  4LLG A;  4NOI A;  4A3E C;  3S1R C;  3S1N C;  3HOZ K;  4A3C K;  3GTM C;  3RZO C;  3CQZ C;  3S1M C;  2O5I A;  2JA6 K;  1IW7 A;  3HKZ L;  1TWC C;  3RZD C;  3M3Y C;  4A3F C;  3HOX C;  5D4D A;  4OIR A;  3GTK C;  3GTO C;  3S2H C;  3S1R K;  1SFO K;  3S1N K;  3GTG C;  3GTJ K;  3H0G K;  5C44 C;  3CQZ K;  4A3E K;  3S1Q C;  4A3J K;  4LJZ A;  4KMU A;  5C4J K;  2NVQ K;  3RZO K;  1TWA C;  1XPP A;  4BBS K;  4A3C C;  2PMZ D;  3M3Y K;  2WAQ D;  3HOX K;  3GTM K;  1I3Q K;  3GTK K;  3S2H K;  4ZH4 A;  2JA6 C;  3S1M K;  3H3V D;  3S15 C;  2BE5 A;  4AYB L;  3S1Q K;  5M3M K;  1TWC K;  2CW0 A;  4YG2 A;  4A3M K;  1SFO C;  3PO2 K;  2JA7 K;  1TWF K;  1Y1V K;  4G7O A;  5C44 K;  3S14 K;  2R93 K;  3S16 K;  4OIN A;  5M5X K;  3S15 K;  4A3I C;  1K83 K;  1I6H C;  4QIW D;  3PO3 C;  1I3Q C;  4KN4 A;  2NVX C;  2YU9 C;  4BY1 C;  1TWF C;  1Y1V C;  4QIW L;  3HOV K;  3S14 C;  3HOZ C;  2WB1 D;  3S16 C;  3HOU K;  4A3M C;  4YFK A;  4LK1 A;  2WAQ L;  3I4N K;  2NVX K;  1K83 C;  2YU9 K;  1I6H K;  4Q4Z A;  5M5Y K;  2Y0S D;  2WB1 L;  4A3I K;  4A3J C;  3PO3 K;  2NVY K;  3HOU C;  3DXJ A;  5C4J C;  4A93 C;  4BBR C;  4XLN A;  1TWA K;  4G7H A;  3HOV C;  1ZYR A;  4OIQ A;  4GZY A;  2A6H A; 
#chains in the Genus database with same CATH topology
 4GTF A;  3NUH A;  2EBB A;  5EGH A;  1VRQ C;  3IPJ A;  5FJ8 K;  5IYC C;  1G51 A;  4GTE A;  1K83 A;  3GDZ A;  4AYB D;  1B4B A;  2PA8 L;  3WOD A;  1O25 A;  5DM6 S;  2E2I K;  3AQP A;  3GEE A;  2Y0S L;  2B63 C;  1O26 A;  4A3K K;  1GE9 A;  4WIL A;  3I4M K;  3M4O K;  2R92 C;  2E2J K;  2P8T A;  1XZP A;  5IYB C;  3LYW A;  4XSX A;  4YFN A;  3I4M C;  2JA5 C;  2GAG C;  1EH1 A;  3V4G A;  1JOE A;  3HOW C;  3N0C A;  1Y1W A;  4C3I C;  5IYB K;  4XSZ A;  1WCM C;  4XCH A;  3Q3Q A;  4LK0 A;  2A6E A;  3BP8 C;  4A3G K;  3GTO K;  1O28 A;  2A68 A;  3A8I A;  4BBS C;  4A3C K;  3S1R C;  5E68 A;  3HOZ K;  4IO9 S;  3S1M C;  2JA6 K;  1IW7 A;  1PJ6 A;  1TWC C;  2P5M A;  4WJ3 M;  3S1R K;  3GTG C;  4KAR A;  1WQG A;  4A3J K;  4LJZ A;  3RZO K;  2NVQ K;  1XPP A;  4DDQ A;  2CFA B;  2PMZ D;  4GTL A;  3S15 C;  5M3M K;  4C45 A;  1O29 A;  2CFA A;  2KWA A;  5CHP A;  3TFH A;  4PAA A;  1TWF K;  1ZQ1 C;  3ERE D;  2ZJQ S;  1J6X A;  2YU9 A;  5M5X K;  3G4C A;  4AH6 A;  4QIW D;  1TWF C;  3GTM A;  1KQ4 A;  1F7V A;  4GTC A;  1O2A A;  4LK1 A;  5IOQ A;  4Q4Z A;  2JA6 A;  5M5Y K;  3PO3 K;  4WFN S;  3HOU C;  4XLN A;  1L0W A;  2VUM A;  3HOV C;  4A3D K;  1FEU A;  4KN7 A;  4GTD A;  3TTG A;  4IOC S;  3N3Y A;  2VUM C;  1I6V A;  2KPU A;  2JA8 C;  3MML B;  3CAG A;  4BLA A;  1Y1W K;  4BY7 C;  4A93 K;  4ILD A;  2JA7 C;  3CQZ A;  4GTB A;  5TMC A;  2NVT K;  3HKZ D;  5JVH S;  2VUM K;  3PIO S;  4A3B C;  2O5J A;  4BXX K;  5JVG S;  5FLM K;  4Y7N C;  4QJV A;  2NVT C;  4KM8 A;  3K7A C;  1VJE A;  2FQO A;  1RU0 A;  3FOF A;  1J6W A;  3GTP C;  4Y52 K;  4C3J K;  3EQL A;  3PIP S;  2D6F C;  5IYD C;  3OPF A;  4BBR K;  5IP7 K;  4KAT A;  3GTQ K;  2E2I A;  3TFJ A;  1F9N A;  4Y52 C;  5HL8 A;  4C3H C;  4P5A A;  5IOT A;  3GTQ A;  4C3J C;  4C2M C;  1R9T C;  2L3U A;  3A8J A;  3GTQ C;  4X6A C;  2XCQ A;  1INN A;  1WSR A;  3VA7 A;  5C3E K;  4JK1 A;  1HQM A;  3M4O C;  2R92 K;  5TJ3 A;  4KM9 A;  1ZBS A;  3AD8 C;  2RGR A;  3H3V L;  1USM A;  1F7U A;  3ORE A;  3TFI A;  3GTJ C;  1WOP A;  4A3E C;  3S1N C;  1BJT A;  1WQH A;  3CQZ C;  2JA7 A;  5L46 A;  5IOS A;  2O5I A;  4KMA A;  4OIR A;  5D4D A;  1SFO K;  2V6T A;  3S1N K;  3G4A A;  3H0G K;  5C44 C;  3AD9 C;  3CQZ K;  3S1Q C;  4KMU A;  3GIR A;  1EFW A;  2JA5 A;  4BBS K;  4A3C C;  1WIH A;  4LQY A;  3GEI A;  5HQH A;  2JA6 C;  3S1M K;  3H3V D;  1DCO A;  1ZXO A;  3S1Q K;  1TWC K;  4U67 S;  4G0V A;  2JA7 K;  1VH2 A;  3S14 K;  3BUE A;  4KB2 A;  2YU9 C;  3S14 C;  1PJ5 A;  3ADA C;  3GTJ A;  2V6S A;  4GTA A;  2YU9 K;  1K83 C;  1TWF A;  1I6H K;  2FQT A;  1WOS A;  4BBR C;  4WCE S;  1ZYR A;  4FZB A;  4GZY A;  1R9T A;  3GTG A;  1F93 A;  1XZQ B;  3L4J A;  4A3L K;  3HXA A;  4KAW X;  1TWH C;  2E2I C;  3N0B A;  2B63 K;  3GEH A;  5C3E C;  2KXY A;  2PA8 D;  5M3F K;  4A3L C;  4A3K C;  4BKW A;  3GTP A;  1TWH K;  4A3D C;  5HL7 S;  4KMH A;  1BDF A;  4MQ9 A;  5IYC K;  4BLB A;  1I3Q A;  4OIP A;  1WCM A;  1WQF A;  5EGE A;  3SZZ A;  1Y1W C;  5IP9 K;  3I4N C;  3S17 C;  1EI6 A;  1O2F B;  2JA5 K;  3HOY K;  3PO2 C;  4A3B K;  3OEP A;  1XZP B;  3K7A K;  1JQW A;  4KAS A;  5M5W K;  1EK8 A;  4A3G C;  5C4X C;  4G7Z A;  1HI9 A;  4FM9 A;  2E2J C;  2E2H K;  2GSU A;  3GTK A;  2B63 A;  5IP7 C;  5IYD K;  3S2D K;  5IOR A;  2R92 A;  4C3H K;  3HOW K;  3CF5 S;  4GFQ A;  3GTL K;  3GTG K;  4A3F K;  1R9T K;  4NOI A;  2ZJR S;  2XCR B;  1IL2 A;  1J6V A;  3GTM C;  3RZO C;  3DLL S;  3QX3 A;  3RZD C;  4A3F C;  2L5N A;  3GTO C;  1YCL A;  4WJ4 A;  3BP3 A;  4WFA S;  1O24 A;  1J98 A;  1USO A;  4RMF A;  1TWG A;  2WAQ D;  1I3Q K;  2NVY A;  1IE0 A;  4YG2 A;  3JST A;  1SFO C;  1XXC A;  4J3N A;  4A3M K;  1IBA A;  1IQ0 A;  1XZQ A;  3S0X A;  5C44 K;  2R93 K;  3S16 K;  4WF9 S;  2NVX A;  1TWC A;  2PHC B;  4A3I C;  3S15 K;  4WFB S;  4BY1 C;  2W7V A;  1DCP A;  1IS1 A;  3S16 C;  3HOU K;  5JFE A;  5DM7 S;  1WOO A;  4YFK A;  2ZUE A;  1B4A A;  2WAQ L;  1ISE A;  3T00 A;  3I4N K;  2JH3 A;  1BGW A;  1Y1V A;  1O27 A;  2Y0S D;  1VLO A;  4A93 C;  5C4J C;  1TWA K;  4G7H A;  2KQ1 A;  4OIQ A;  4KDD A;  1O2B A;  1I50 K;  2A6H A;  2R7Z K;  1WOR A;  4KMD A;  2A69 A;  4BXX C;  4Y7N K;  4YFX A;  2ZUF A;  1DCH A;  3FKI C;  2E2H C;  2GSO A;  1I50 C;  2R7Z C;  1PJ7 A;  5JVO A;  1YNN A;  4MEX A;  1EQR A;  3GSI A;  1TWA A;  3FHZ A;  5TMF A;  3S2D C;  1YNJ A;  2JA8 K;  2PMZ L;  2ZJP S;  3FKI K;  3LPX A;  3GTL C;  4Q5S A;  4BY7 K;  4OIO A;  2PPB A;  3AD7 C;  4GT9 A;  3T02 A;  5FLM C;  3H0G A;  3RZD K;  4C3I K;  1XXA A;  1WCM K;  3AQO A;  2NVY C;  2XCO A;  4KB4 A;  4X6A K;  2R93 A;  4MEY A;  1TWG C;  2ZFZ A;  1AB4 A;  3GTP K;  3AH5 A;  5IP9 C;  3T01 A;  3S17 K;  4LOW A;  4G0W A;  3HOY C;  3PO2 K;  1SMY A;  3GTO A;  4P9S A;  1TWG K;  1YX2 A;  2R93 C;  4G0U A;  4QJV B;  4LR2 A;  3LAP A;  4C2M K;  4XLP A;  2NVQ C;  4BY1 K;  1V5V A;  3FOE A;  3H0G C;  5C4X K;  4LLG A;  2V6U A;  3FKI A;  3HKZ L;  3M3Y C;  3GTL A;  3HOX C;  3GTK C;  3S2H C;  3GTJ K;  4A3E K;  2GAH C;  5C4J K;  1TWA C;  4M1X A;  3M3Y K;  1I50 A;  3SZY A;  3HOX K;  3GTM K;  3GTK K;  2RH6 A;  4O2D A;  3S2H K;  2E2H A;  2R7Z A;  4ZH4 A;  1C0A A;  4P5B A;  1DD5 A;  2BE5 A;  4AYB L;  1XXB A;  4IOA S;  3L4K A;  2CW0 A;  1JVI A;  1VGX A;  4KC6 A;  4PAB A;  1Y1V K;  4G7O A;  4OIN A;  2GSN A;  1K83 K;  2Y3P A;  3LAJ A;  1I6H C;  3PO3 C;  1I3Q C;  4KN4 A;  2NVX C;  1Y1V C;  1WSV A;  4QIW L;  3HOV K;  3HOZ C;  2WB1 D;  1BS2 A;  4A3M C;  1SFO A;  5CJ9 A;  1ZVU A;  1X31 C;  2NVX K;  2WB1 L;  4A3I K;  4A3J C;  1TWH A;  3A8K A;  2NVY K;  3DXJ A;  1UV7 A; 
#chains in the Genus database with same CATH homology
 4KN7 A;  4A3L K;  2A69 A;  4BXX C;  2VUM C;  1I6V A;  4YFX A;  2JA8 C;  4Y7N K;  1TWH C;  2E2I C;  5FJ8 K;  3FKI C;  3GTG K;  1Y1W K;  5IYC C;  4BY7 C;  2B63 K;  4A93 K;  2JA7 C;  5C3E C;  2E2H C;  1I50 C;  5TMC A;  2PA8 D;  3HKZ D;  1YNN A;  4MEX A;  2R7Z C;  5M3F K;  4A3L C;  2NVT K;  4AYB D;  4A3K C;  2VUM K;  4A3B C;  5TMF A;  2O5J A;  2PA8 L;  1TWH K;  3WOD A;  3S2D C;  4BXX K;  1YNJ A;  4A3D C;  4Y7N C;  5FLM K;  2PMZ L;  3FKI K;  2JA8 K;  2E2I K;  4QJV A;  1BDF A;  3GTL C;  2NVT C;  4Q5S A;  3K7A C;  4MQ9 A;  4OIO A;  2B63 C;  2Y0S L;  2PPB A;  5IYC K;  4BY7 K;  4OIP A;  4A3D K;  1Y1W C;  4A3K K;  5IP9 K;  3I4N C;  3S17 C;  5FLM C;  3RZD K;  3GTP C;  4Y52 K;  3HOY K;  2JA5 K;  4A3B K;  3PO2 C;  4C3I K;  4C3J K;  3EQL A;  1WCM K;  3I4M K;  2R92 C;  3M4O K;  2NVY C;  2E2J K;  4X6A K;  5IYD C;  5IP7 K;  4BBR K;  3GTQ K;  3K7A K;  5IYB C;  4MEY A;  4XSX A;  4Y52 C;  1TWG C;  4YFN A;  4C3H C;  5M5W K;  3GTP K;  4C3J C;  4C2M C;  2JA5 C;  1R9T C;  5IP9 C;  3I4M C;  4A3G C;  5C4X C;  3S17 K;  3HOW C;  4G7Z A;  3GTQ C;  3HOY C;  2E2J C;  4C3I C;  1SMY A;  4X6A C;  5IYB K;  4XSZ A;  5C3E K;  2E2H K;  4JK1 A;  1HQM A;  1WCM C;  3M4O C;  1TWG K;  2R92 K;  4LK0 A;  2R93 C;  5IP7 C;  2A6E A;  4QJV B;  5IYD K;  3S2D K;  1I50 K;  4C2M K;  2R7Z K;  3H3V L;  4A3G K;  4XLP A;  4C3H K;  3HOW K;  3GTO K;  2NVQ C;  4BY1 K;  2A68 A;  3GTJ C;  4A3F K;  4BBS C;  3H0G C;  5C4X K;  1R9T K;  3GTL K;  4LLG A;  4NOI A;  4A3E C;  3S1R C;  3S1N C;  3HOZ K;  4A3C K;  3GTM C;  3RZO C;  3CQZ C;  3S1M C;  2O5I A;  2JA6 K;  1IW7 A;  3HKZ L;  1TWC C;  3RZD C;  3M3Y C;  4A3F C;  3HOX C;  5D4D A;  4OIR A;  3GTK C;  3GTO C;  3S2H C;  3S1R K;  1SFO K;  3S1N K;  3GTG C;  3GTJ K;  3H0G K;  5C44 C;  3CQZ K;  4A3E K;  3S1Q C;  4A3J K;  4LJZ A;  4KMU A;  5C4J K;  2NVQ K;  3RZO K;  1TWA C;  1XPP A;  4BBS K;  4A3C C;  2PMZ D;  3M3Y K;  2WAQ D;  3HOX K;  3GTM K;  1I3Q K;  3GTK K;  3S2H K;  4ZH4 A;  2JA6 C;  3S1M K;  3H3V D;  3S15 C;  2BE5 A;  4AYB L;  3S1Q K;  5M3M K;  1TWC K;  2CW0 A;  4YG2 A;  4A3M K;  1SFO C;  3PO2 K;  2JA7 K;  1TWF K;  1Y1V K;  4G7O A;  5C44 K;  3S14 K;  2R93 K;  3S16 K;  4OIN A;  5M5X K;  3S15 K;  4A3I C;  1K83 K;  1I6H C;  4QIW D;  3PO3 C;  1I3Q C;  4KN4 A;  2NVX C;  2YU9 C;  4BY1 C;  1TWF C;  1Y1V C;  4QIW L;  3HOV K;  3S14 C;  3HOZ C;  2WB1 D;  3S16 C;  3HOU K;  4A3M C;  4YFK A;  4LK1 A;  2WAQ L;  3I4N K;  2NVX K;  1K83 C;  2YU9 K;  1I6H K;  4Q4Z A;  5M5Y K;  2Y0S D;  2WB1 L;  4A3I K;  4A3J C;  3PO3 K;  2NVY K;  3HOU C;  3DXJ A;  5C4J C;  4A93 C;  4BBR C;  4XLN A;  1TWA K;  4G7H A;  3HOV C;  1ZYR A;  4OIQ A;  4GZY A;  2A6H A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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