4A3CC

Rna polymerase ii initial transcribing complex with a 5nt dna-rna hybrid
Total Genus 62
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
62
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transcription
publication title Structural basis of initial RNA polymerase II transcription.
pubmed doi rcsb
molecule keywords DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1
total genus 62
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-09-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 4a3cC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 4a3cC01
4MEYA 4BXXK 4BY1K 2Y0SL 2NVXK 3PO2C 3HKZD 1I3QC 3WODA 2B63C 1I6VA 3GTMC 1SFOK 2JA6K 4YG2A 3H3VL 3HOYK 2Y0SD 3H3VD 2JA8K 4BBSC 4A3JK 2R7ZK 1TWHC 4C3HC 1TWAK 1SMYA 4BY7C 2NVYC 3S1NC 2PA8L 2E2JC 4LK0A 4Y7NC 3RZOC 3S17C 2R93C 5M3MK 3S1RK 2A6EA 2PA8D 4G7OA 2NVTC 4Q5SA 1ZYRA 3M3YC 1I6HC 2CW0A 4BBRK 5IP7C 2PMZL 2JA7K 3HOVC 5D4DA 4C2MC 2JA5C 2NVQC 2PMZD 4A3DK 2JA6C 5TMFA 3CQZK 5C4JK 2WAQD 2PPBA 4A3IC 3PO3K 4A3CK 2E2IC 4A93K 1I50K 4X6AK 3S16K 4QIWL 4A3JC 4C3IK 4QJVA 5TMCA 2O5JA 4ZH4A 4QIWD 5FLMK 4A3FK 5M5XK 4XSXA 3GTOK 4NOIA 4Y52K 4BBRC 4A3EC 5IYDK 4OIQA 4A3MK 4OIOA 3GTGC 5IYBK 3HOWK 1TWCK 3HOVK 4A3BK 1Y1WK 3HOXK 3CQZC 3GTJK 4JK1A 4YFXA 1TWGK 5C4JC 3M4OC 3GTQK 2E2HK 4KMUA 3I4MC 4X6AC 1K83K 1R9TK 2O5IA 4A3DC 3S2HC 1Y1VC 4BXXC 1TWFK 4BY1C 4MEXA 3FKIK 2NVXC 2WAQL 3RZDK 3HOZK 4Y52C 1SFOC 4LJZA 3HOYC 3H0GK 3S1MK 4A3GK 5C3EK 3S15K 1TWCC 1WCMK 2R7ZC 5FJ8K 1TWAC 3I4NK 1HQMA 1Y1WC 2JA8C 1K83C 4A3KK 3S1RC 4GZYA 5IP9K 2JA7C 3DXJA 2VUMK 1XPPA 3HOZC 2BE5A 3PO2K 2B63K 2WB1L 3GTMK 5M5WK 5C44K 2WB1D 3PO3C 4MQ9A 3S1MC 4A3CC 4A3GC 5C3EC 1I50C 4A93C 3GTPK 3S2DK 3S16C 4BBSK 4C3IC 2A6HA 4XLPA 4C3HK 2NVYK 3S1NK 4OIRA 2E2JK 3RZOK 4XSZA 1IW7A 3S17K 5FLMC 4A3FC 3S14K 4OINA 4Q4ZA 3GTOC 5C4XK 3HOUK 4QJVB 4C3JK 5IP7K 5IYDC 4A3MC 2A69A 3EQLA 5M3FK 2VUMC 4C2MK 2JA5K 5IYBC 3HOWC 4A3BC 2NVQK 4A3LK 3HOXC 3GTJC 1BDFA 1TWGC 4OIPA 5C44C 4AYBL 3GTQC 1YNNA 2E2HC 5M5YK 4A3IK 2E2IK 3GTPC 3S2DC 4AYBD 3GTLK 1R9TC 3K7AK 2R92K 3S1QK 5IYCK 3GTKK 1TWFC 3S14C 3FKIC 3RZDC 1I3QK 5C4XC 3HOUC 4A3EK 4C3JC 2A68A 3H0GC 4YFNA 3GTGK 4G7ZA 4G7HA 1YNJA 3S15C 1WCMC 4A3LC 4XLNA 1TWHK 3M4OK 2YU9C 4BY7K 3I4NC 3I4MK 4Y7NK 2R93K 2YU9K 3GTLC 4KN4A 1I6HK 4A3KC 2NVTK 4LLGA 3M3YK 4LK1A 5IP9C 3K7AC 2R92C 4YFKA 3S1QC 5IYCC 3HKZL 4KN7A 3S2HK 3GTKC 1Y1VK
chains in the Genus database with same CATH superfamily
3GEEA 4GTEA 2NVXK 2JA6K 2B63C 4YG2A 3CF5S 1VH2A 1EI6A 3GTGA 3H3VD 1XXBA 3GEIA 1TWHC 3T02A 4KB4A 4Y7NC 3S17C 3S1RK 2JA7K 4AH6A 3HOVC 1SFOA 2JA6C 5TMFA 1DD5A 2WAQD 2PPBA 4A3IC 3SZZA 2E2IC 2R7ZA 1VRQC 4QJVA 3TFJA 1TWAA 1Y1WA 1O2AA 5CHPA 1BGWA 1O2FB 1IQ0A 2ZJQS 1XZQB 2CFAB 3HOWK 3L4KA 4JK1A 1TWGK 3GTQK 3I4MC 1K83K 1EK8A 1R9TK 4WFAS 3GIRA 2XCRB 3FOFA 2EBBA 3S2HC 1TWFK 1VJEA 3G4AA 1IS1A 3T00A 4G0VA 1WCMK 2E2HA 1K83C 3AD9C 3FOEA 4A3KK 3NUHA 1XPPA 5CJ9A 3L4JA 3GTMK 3OPFA 5C44K 2RH6A 2WB1D 4A3CC 3S2DK 3S16C 2A6HA 2NVYK 3RZOK 1IW7A 4A3FC 5C4XK 5JVGS 2R92A 4PAAA 4A3MC 4C2MK 2JA5K 4KDDA 2B63A 4A3BC 4WFNS 1F7VA 1VLOA 3GTJC 4KM9A 5C44C 4AYBL 1YNNA 2ZUFA 3S2DC 4WJ4A 1TWHA 3K7AK 1WOPA 1XZQA 4M1XA 1BS2A 3GTKK 1EQRA 2CFAA 5EGHA 2KXYA 5C4XC 3TFIA 3H0GC 3S15C 2JA6A 3N3YA 3N0BA 2E2IA 1O25A 1WIHA 4KN4A 3FHZA 4LK1A 3K7AC 4GTLA 4P5AA 4KN7A 3GTKC 1Y1VK 4MEYA 4BY1K 2ZJRS 2XCQA 3H3VL 1X31C 2Y0SD 4LQYA 3Q3QA 4GFQA 2GSUA 4FZBA 4C3HC 1SMYA 2E2JC 2JA8K 5M3MK 4WILA 4G7OA 2P8TA 1JOEA 1I50K 4A93K 4X6AK 2KPUA 5IOQA 1K83A 4XSXA 3GTOK 4NOIA 4KAWX 4A3EC 4KMAA 2W7VA 4Y52K 5IYDK 4OIOA 2D6FC 3HOVK 1TWCK 3HOXK 5IOSA 3M4OC 1KQ4A 4X6AC 4IOAS 3PIPS 1PJ5A 2O5IA 4A3DC 4FM9A 1L0WA 4MEXA 3FKIK 2NVXC 3AD8C 4Y52C 3S1MK 1TWCC 3V4GA 3GTJA 2GSOA 3ERED 1HQMA 3S1RC 5IP9K 2JA7C 3DXJA 1J98A 4KMHA 2BE5A 3PO2K 2WB1L 3BUEA 5M5WK 2GAGC 3H0GA 4WCES 3S1MC 3GTPK 3AQOA 1WORA 4BBSK 1WQHA 4XLPA 1YX2A 3S1NK 4XSZA 4Q4ZA 3HOUK 5IP7K 3GTKA 2JH3A 2A69A 3EQLA 5M3FK 1WOOA 3LAJA 2NVQK 3HOWC 5HL7S 1EFWA 1TWGC 3GTQC 3GTPC 3SZYA 1R9TC 4GTFA 3BP3A 5IYCK 1TWFC 5L46A 1I3QK 3HOUC 2V6UA 1J6VA 2A68A 4YFNA 3GTGK 4KASA 1YNJA 1WCMC 5E68A 2V6TA 4RMFA 4BY7K 1C0AA 2R93K 4A3KC 1O26A 1RU0A 4YFKA 3N0CA 5IYCC 4XCHA 4U67S 4BXXK 4WJ3M 2Y0SL 1I3QC 3GTMC 1SFOK 3HOYK 1USOA 2R7ZK 1JQWA 1TWAK 4BY7C 2NVYC 1Y1WK 4LK0A 3RZOC 1FEUA 2R93C 2PA8D 1ZYRA 3DLLS 2KQ1A 2CW0A 4C2MC 2NVXA 2JA5C 2PMZD 1PJ6A 1J6XA 1DCPA 3ADAC 3CQZK 3PO3K 1TWCA 3VA7A 3OREA 3GDZA 1ISEA 4C3IK 2FQOA 5TMCA 5TJ3A 2O5JA 3A8IA 4ZH4A 4QIWD 5FLMK 2JA7A 1WQGA 4OIQA 3HXAA 5IYBK 3A8KA 1ZVUA 3CQZC 2P5MA 4YFXA 4BKWA 1HI9A 1F93A 5HL8A 3G4CA 2E2HK 1O28A 3CAGA 4GTCA 1Y1VC 4BY1C 3RZDK 2WAQL 1O24A 4A3GK 1TWGA 5FJ8K 5JVOA 3GTQA 2L3UA 3I4NK 3GTPA 1BJTA 2GSNA 2JA8C 4ILDA 1R9TA 1O27A 4GTAA 1XXAA 2VUMK 1TWFA 3GEHA 2B63K 4KATA 4A3GC 1WCMA 2ZFZA 4A93C 1I50C 1IL2A 4IO9S 5EGEA 4OIRA 1WSVA 4J3NA 3S17K 3S14K 4OINA 3GTOC 1B4BA 5IYDC 1V5VA 2VUMC 3GSIA 1I3QA 4A3LK 5IORA 4KMDA 3GTMA 3HOXC 4OIPA 2YU9K 5M5YK 4A3IK 2E2IK 1F9NA 3BP8C 3GTLK 4GTDA 1INNA 3LAPA 3S1QK 2GAHC 2NVYA 4P5BA 2R93A 3S14C 3FKIC 1F7UA 2JA5A 4G7ZA 4A3LC 1ZQ1C 2YU9C 3I4MK 1O2BA 3GTLC 1I6HK 2NVTK 4KARA 3M3YK 3JSTA 5IP9C 1O29A 3S1QC 1GE9A 4KB2A 3S2HK 3PO2C 3HKZD 3WODA 1I6VA 1DCHA 3S0XA 1IBAA 2KWAA 4BBSC 3CQZA 4A3JK 2PA8L 2RGRA 3A8JA 3S1NC 1WSRA 1XXCA 2A6EA 1I6HC 4Q5SA 2NVTC 1AB4A 3M3YC 4BBRK 5IP7C 2PMZL 1Y1VA 2ZJPS 5D4DA 4G0UA 2NVQC 2L5NA 1B4AA 5C4JK 3LYWA 5DM7S 1ZBSA 4A3CK 3S16K 4QIWL 4A3JC 1XZPB 3TTGA 1ZXOA 4LR2A 1WQFA 4A3FK 5M5XK 1UV7A 5JVHS 4BBRC 4A3MK 2FQTA 3LPXA 3GTGC 2PHCB 4A3BK 3AH5A 1DCOA 1WOSA 3GTJK 5C4JC 4KMUA 1I50A 5IOTA 4O2DA 3HOZK 4BXXC 3GTOA 4G0WA 1SFOC 4LJZA 3HOYC 1USMA 2VUMA 3H0GK 4LOWA 3OEPA 5C3EK 3S15K 2R7ZC 1TWAC 1EH1A 1Y1WC 3QX3A 5HQHA 4GZYA 1G51A 3FKIA 3HOZC 3PO3C 4MQ9A 5C3EC 4C3IC 4C45A 4C3HK 2YU9A 2E2JK 4GT9A 3GTLA 5FLMC 4IOCS 3IPJA 1JVIA 4QJVB 4C3JK 4GTBA 5IYBC 4KM8A 1XZPA 4P9SA 2Y3PA 1IE0A 1BDFA 3MMLB 2E2HC 1J6WA 4AYBD 4WF9S 4WFBS 3AQPA 2R92K 2ZUEA 3PIOS 4KC6A 4BLBA 3RZDC 4PABA 4A3EK 2V6SA 4C3JC 1YCLA 2XCOA 5DM6S 4G7HA 4XLNA 3T01A 1TWHK 3M4OK 4BLAA 3I4NC 4Y7NK 3TFHA 4DDQA 5JFEA 4LLGA 3AD7C 2R92C 4A3DK 3HKZL 1VGXA 1PJ7A
chains in the Genus database with same CATH topology
4MEYA 4BXXK 4BY1K 2Y0SL 2NVXK 3PO2C 3HKZD 1I3QC 3WODA 2B63C 1I6VA 3GTMC 1SFOK 2JA6K 4YG2A 3H3VL 3HOYK 2Y0SD 3H3VD 2JA8K 4BBSC 4A3JK 2R7ZK 1TWHC 4C3HC 1TWAK 1SMYA 4BY7C 2NVYC 3S1NC 2PA8L 2E2JC 4LK0A 4Y7NC 3RZOC 3S17C 2R93C 5M3MK 3S1RK 2A6EA 2PA8D 4G7OA 2NVTC 4Q5SA 1ZYRA 3M3YC 1I6HC 2CW0A 4BBRK 5IP7C 2PMZL 2JA7K 3HOVC 5D4DA 4C2MC 2JA5C 2NVQC 2PMZD 4A3DK 2JA6C 5TMFA 3CQZK 5C4JK 2WAQD 2PPBA 4A3IC 3PO3K 4A3CK 2E2IC 4A93K 1I50K 4X6AK 3S16K 4QIWL 4A3JC 4C3IK 4QJVA 5TMCA 2O5JA 4ZH4A 4QIWD 5FLMK 4A3FK 5M5XK 4XSXA 3GTOK 4NOIA 4Y52K 4BBRC 4A3EC 5IYDK 4OIQA 4A3MK 4OIOA 3GTGC 5IYBK 3HOWK 1TWCK 3HOVK 4A3BK 1Y1WK 3HOXK 3CQZC 3GTJK 4JK1A 4YFXA 1TWGK 5C4JC 3M4OC 3GTQK 2E2HK 4KMUA 3I4MC 4X6AC 1K83K 1R9TK 2O5IA 4A3DC 3S2HC 1Y1VC 4BXXC 1TWFK 4BY1C 4MEXA 3FKIK 2NVXC 2WAQL 3RZDK 3HOZK 4Y52C 1SFOC 4LJZA 3HOYC 3H0GK 3S1MK 4A3GK 5C3EK 3S15K 1TWCC 1WCMK 2R7ZC 5FJ8K 1TWAC 3I4NK 1HQMA 1Y1WC 2JA8C 1K83C 4A3KK 3S1RC 4GZYA 5IP9K 2JA7C 3DXJA 2VUMK 1XPPA 3HOZC 2BE5A 3PO2K 2B63K 2WB1L 3GTMK 5M5WK 5C44K 2WB1D 3PO3C 4MQ9A 3S1MC 4A3CC 4A3GC 5C3EC 1I50C 4A93C 3GTPK 3S2DK 3S16C 4BBSK 4C3IC 2A6HA 4XLPA 4C3HK 2NVYK 3S1NK 4OIRA 2E2JK 3RZOK 4XSZA 1IW7A 3S17K 5FLMC 4A3FC 3S14K 4OINA 4Q4ZA 3GTOC 5C4XK 3HOUK 4QJVB 4C3JK 5IP7K 5IYDC 4A3MC 2A69A 3EQLA 5M3FK 2VUMC 4C2MK 2JA5K 5IYBC 3HOWC 4A3BC 2NVQK 4A3LK 3HOXC 3GTJC 1BDFA 1TWGC 4OIPA 5C44C 4AYBL 3GTQC 1YNNA 2E2HC 5M5YK 4A3IK 2E2IK 3GTPC 3S2DC 4AYBD 3GTLK 1R9TC 3K7AK 2R92K 3S1QK 5IYCK 3GTKK 1TWFC 3S14C 3FKIC 3RZDC 1I3QK 5C4XC 3HOUC 4A3EK 4C3JC 2A68A 3H0GC 4YFNA 3GTGK 4G7ZA 4G7HA 1YNJA 3S15C 1WCMC 4A3LC 4XLNA 1TWHK 3M4OK 2YU9C 4BY7K 3I4NC 3I4MK 4Y7NK 2R93K 2YU9K 3GTLC 4KN4A 1I6HK 4A3KC 2NVTK 4LLGA 3M3YK 4LK1A 5IP9C 3K7AC 2R92C 4YFKA 3S1QC 5IYCC 3HKZL 4KN7A 3S2HK 3GTKC 1Y1VK
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4MEY A;  4BXX K;  4BY1 K;  2Y0S L;  2NVX K;  3PO2 C;  3HKZ D;  1I3Q C;  3WOD A;  2B63 C;  1I6V A;  3GTM C;  1SFO K;  2JA6 K;  4YG2 A;  3H3V L;  3HOY K;  2Y0S D;  3H3V D;  2JA8 K;  4BBS C;  4A3J K;  2R7Z K;  1TWH C;  4C3H C;  1TWA K;  1SMY A;  4BY7 C;  2NVY C;  3S1N C;  2PA8 L;  2E2J C;  4LK0 A;  4Y7N C;  3RZO C;  3S17 C;  2R93 C;  5M3M K;  3S1R K;  2A6E A;  2PA8 D;  4G7O A;  2NVT C;  4Q5S A;  1ZYR A;  3M3Y C;  1I6H C;  2CW0 A;  4BBR K;  5IP7 C;  2PMZ L;  2JA7 K;  3HOV C;  5D4D A;  4C2M C;  2JA5 C;  2NVQ C;  2PMZ D;  4A3D K;  2JA6 C;  5TMF A;  3CQZ K;  5C4J K;  2WAQ D;  2PPB A;  4A3I C;  3PO3 K;  4A3C K;  2E2I C;  4A93 K;  1I50 K;  4X6A K;  3S16 K;  4QIW L;  4A3J C;  4C3I K;  4QJV A;  5TMC A;  2O5J A;  4ZH4 A;  4QIW D;  5FLM K;  4A3F K;  5M5X K;  4XSX A;  3GTO K;  4NOI A;  4Y52 K;  4BBR C;  4A3E C;  5IYD K;  4OIQ A;  4A3M K;  4OIO A;  3GTG C;  5IYB K;  3HOW K;  1TWC K;  3HOV K;  4A3B K;  1Y1W K;  3HOX K;  3CQZ C;  3GTJ K;  4JK1 A;  4YFX A;  1TWG K;  5C4J C;  3M4O C;  3GTQ K;  2E2H K;  4KMU A;  3I4M C;  4X6A C;  1K83 K;  1R9T K;  2O5I A;  4A3D C;  3S2H C;  1Y1V C;  4BXX C;  1TWF K;  4BY1 C;  4MEX A;  3FKI K;  2NVX C;  2WAQ L;  3RZD K;  3HOZ K;  4Y52 C;  1SFO C;  4LJZ A;  3HOY C;  3H0G K;  3S1M K;  4A3G K;  5C3E K;  3S15 K;  1TWC C;  1WCM K;  2R7Z C;  5FJ8 K;  1TWA C;  3I4N K;  1HQM A;  1Y1W C;  2JA8 C;  1K83 C;  4A3K K;  3S1R C;  4GZY A;  5IP9 K;  2JA7 C;  3DXJ A;  2VUM K;  1XPP A;  3HOZ C;  2BE5 A;  3PO2 K;  2B63 K;  2WB1 L;  3GTM K;  5M5W K;  5C44 K;  2WB1 D;  3PO3 C;  4MQ9 A;  3S1M C;  4A3C C;  4A3G C;  5C3E C;  1I50 C;  4A93 C;  3GTP K;  3S2D K;  3S16 C;  4BBS K;  4C3I C;  2A6H A;  4XLP A;  4C3H K;  2NVY K;  3S1N K;  4OIR A;  2E2J K;  3RZO K;  4XSZ A;  1IW7 A;  3S17 K;  5FLM C;  4A3F C;  3S14 K;  4OIN A;  4Q4Z A;  3GTO C;  5C4X K;  3HOU K;  4QJV B;  4C3J K;  5IP7 K;  5IYD C;  4A3M C;  2A69 A;  3EQL A;  5M3F K;  2VUM C;  4C2M K;  2JA5 K;  5IYB C;  3HOW C;  4A3B C;  2NVQ K;  4A3L K;  3HOX C;  3GTJ C;  1BDF A;  1TWG C;  4OIP A;  5C44 C;  4AYB L;  3GTQ C;  1YNN A;  2E2H C;  5M5Y K;  4A3I K;  2E2I K;  3GTP C;  3S2D C;  4AYB D;  3GTL K;  1R9T C;  3K7A K;  2R92 K;  3S1Q K;  5IYC K;  3GTK K;  1TWF C;  3S14 C;  3FKI C;  3RZD C;  1I3Q K;  5C4X C;  3HOU C;  4A3E K;  4C3J C;  2A68 A;  3H0G C;  4YFN A;  3GTG K;  4G7Z A;  4G7H A;  1YNJ A;  3S15 C;  1WCM C;  4A3L C;  4XLN A;  1TWH K;  3M4O K;  2YU9 C;  4BY7 K;  3I4N C;  3I4M K;  4Y7N K;  2R93 K;  2YU9 K;  3GTL C;  4KN4 A;  1I6H K;  4A3K C;  2NVT K;  4LLG A;  3M3Y K;  4LK1 A;  5IP9 C;  3K7A C;  2R92 C;  4YFK A;  3S1Q C;  5IYC C;  3HKZ L;  4KN7 A;  3S2H K;  3GTK C;  1Y1V K; 
#chains in the Genus database with same CATH topology
 3GEE A;  4GTE A;  2NVX K;  2JA6 K;  2B63 C;  4YG2 A;  3CF5 S;  1VH2 A;  1EI6 A;  3GTG A;  3H3V D;  1XXB A;  3GEI A;  1TWH C;  3T02 A;  4KB4 A;  4Y7N C;  3S17 C;  3S1R K;  2JA7 K;  4AH6 A;  3HOV C;  1SFO A;  2JA6 C;  5TMF A;  1DD5 A;  2WAQ D;  2PPB A;  4A3I C;  3SZZ A;  2E2I C;  2R7Z A;  1VRQ C;  4QJV A;  3TFJ A;  1TWA A;  1Y1W A;  1O2A A;  5CHP A;  1BGW A;  1O2F B;  1IQ0 A;  2ZJQ S;  1XZQ B;  2CFA B;  3HOW K;  3L4K A;  4JK1 A;  1TWG K;  3GTQ K;  3I4M C;  1K83 K;  1EK8 A;  1R9T K;  4WFA S;  3GIR A;  2XCR B;  3FOF A;  2EBB A;  3S2H C;  1TWF K;  1VJE A;  3G4A A;  1IS1 A;  3T00 A;  4G0V A;  1WCM K;  2E2H A;  1K83 C;  3AD9 C;  3FOE A;  4A3K K;  3NUH A;  1XPP A;  5CJ9 A;  3L4J A;  3GTM K;  3OPF A;  5C44 K;  2RH6 A;  2WB1 D;  4A3C C;  3S2D K;  3S16 C;  2A6H A;  2NVY K;  3RZO K;  1IW7 A;  4A3F C;  5C4X K;  5JVG S;  2R92 A;  4PAA A;  4A3M C;  4C2M K;  2JA5 K;  4KDD A;  2B63 A;  4A3B C;  4WFN S;  1F7V A;  1VLO A;  3GTJ C;  4KM9 A;  5C44 C;  4AYB L;  1YNN A;  2ZUF A;  3S2D C;  4WJ4 A;  1TWH A;  3K7A K;  1WOP A;  1XZQ A;  4M1X A;  1BS2 A;  3GTK K;  1EQR A;  2CFA A;  5EGH A;  2KXY A;  5C4X C;  3TFI A;  3H0G C;  3S15 C;  2JA6 A;  3N3Y A;  3N0B A;  2E2I A;  1O25 A;  1WIH A;  4KN4 A;  3FHZ A;  4LK1 A;  3K7A C;  4GTL A;  4P5A A;  4KN7 A;  3GTK C;  1Y1V K;  4MEY A;  4BY1 K;  2ZJR S;  2XCQ A;  3H3V L;  1X31 C;  2Y0S D;  4LQY A;  3Q3Q A;  4GFQ A;  2GSU A;  4FZB A;  4C3H C;  1SMY A;  2E2J C;  2JA8 K;  5M3M K;  4WIL A;  4G7O A;  2P8T A;  1JOE A;  1I50 K;  4A93 K;  4X6A K;  2KPU A;  5IOQ A;  1K83 A;  4XSX A;  3GTO K;  4NOI A;  4KAW X;  4A3E C;  4KMA A;  2W7V A;  4Y52 K;  5IYD K;  4OIO A;  2D6F C;  3HOV K;  1TWC K;  3HOX K;  5IOS A;  3M4O C;  1KQ4 A;  4X6A C;  4IOA S;  3PIP S;  1PJ5 A;  2O5I A;  4A3D C;  4FM9 A;  1L0W A;  4MEX A;  3FKI K;  2NVX C;  3AD8 C;  4Y52 C;  3S1M K;  1TWC C;  3V4G A;  3GTJ A;  2GSO A;  3ERE D;  1HQM A;  3S1R C;  5IP9 K;  2JA7 C;  3DXJ A;  1J98 A;  4KMH A;  2BE5 A;  3PO2 K;  2WB1 L;  3BUE A;  5M5W K;  2GAG C;  3H0G A;  4WCE S;  3S1M C;  3GTP K;  3AQO A;  1WOR A;  4BBS K;  1WQH A;  4XLP A;  1YX2 A;  3S1N K;  4XSZ A;  4Q4Z A;  3HOU K;  5IP7 K;  3GTK A;  2JH3 A;  2A69 A;  3EQL A;  5M3F K;  1WOO A;  3LAJ A;  2NVQ K;  3HOW C;  5HL7 S;  1EFW A;  1TWG C;  3GTQ C;  3GTP C;  3SZY A;  1R9T C;  4GTF A;  3BP3 A;  5IYC K;  1TWF C;  5L46 A;  1I3Q K;  3HOU C;  2V6U A;  1J6V A;  2A68 A;  4YFN A;  3GTG K;  4KAS A;  1YNJ A;  1WCM C;  5E68 A;  2V6T A;  4RMF A;  4BY7 K;  1C0A A;  2R93 K;  4A3K C;  1O26 A;  1RU0 A;  4YFK A;  3N0C A;  5IYC C;  4XCH A;  4U67 S;  4BXX K;  4WJ3 M;  2Y0S L;  1I3Q C;  3GTM C;  1SFO K;  3HOY K;  1USO A;  2R7Z K;  1JQW A;  1TWA K;  4BY7 C;  2NVY C;  1Y1W K;  4LK0 A;  3RZO C;  1FEU A;  2R93 C;  2PA8 D;  1ZYR A;  3DLL S;  2KQ1 A;  2CW0 A;  4C2M C;  2NVX A;  2JA5 C;  2PMZ D;  1PJ6 A;  1J6X A;  1DCP A;  3ADA C;  3CQZ K;  3PO3 K;  1TWC A;  3VA7 A;  3ORE A;  3GDZ A;  1ISE A;  4C3I K;  2FQO A;  5TMC A;  5TJ3 A;  2O5J A;  3A8I A;  4ZH4 A;  4QIW D;  5FLM K;  2JA7 A;  1WQG A;  4OIQ A;  3HXA A;  5IYB K;  3A8K A;  1ZVU A;  3CQZ C;  2P5M A;  4YFX A;  4BKW A;  1HI9 A;  1F93 A;  5HL8 A;  3G4C A;  2E2H K;  1O28 A;  3CAG A;  4GTC A;  1Y1V C;  4BY1 C;  3RZD K;  2WAQ L;  1O24 A;  4A3G K;  1TWG A;  5FJ8 K;  5JVO A;  3GTQ A;  2L3U A;  3I4N K;  3GTP A;  1BJT A;  2GSN A;  2JA8 C;  4ILD A;  1R9T A;  1O27 A;  4GTA A;  1XXA A;  2VUM K;  1TWF A;  3GEH A;  2B63 K;  4KAT A;  4A3G C;  1WCM A;  2ZFZ A;  4A93 C;  1I50 C;  1IL2 A;  4IO9 S;  5EGE A;  4OIR A;  1WSV A;  4J3N A;  3S17 K;  3S14 K;  4OIN A;  3GTO C;  1B4B A;  5IYD C;  1V5V A;  2VUM C;  3GSI A;  1I3Q A;  4A3L K;  5IOR A;  4KMD A;  3GTM A;  3HOX C;  4OIP A;  2YU9 K;  5M5Y K;  4A3I K;  2E2I K;  1F9N A;  3BP8 C;  3GTL K;  4GTD A;  1INN A;  3LAP A;  3S1Q K;  2GAH C;  2NVY A;  4P5B A;  2R93 A;  3S14 C;  3FKI C;  1F7U A;  2JA5 A;  4G7Z A;  4A3L C;  1ZQ1 C;  2YU9 C;  3I4M K;  1O2B A;  3GTL C;  1I6H K;  2NVT K;  4KAR A;  3M3Y K;  3JST A;  5IP9 C;  1O29 A;  3S1Q C;  1GE9 A;  4KB2 A;  3S2H K;  3PO2 C;  3HKZ D;  3WOD A;  1I6V A;  1DCH A;  3S0X A;  1IBA A;  2KWA A;  4BBS C;  3CQZ A;  4A3J K;  2PA8 L;  2RGR A;  3A8J A;  3S1N C;  1WSR A;  1XXC A;  2A6E A;  1I6H C;  4Q5S A;  2NVT C;  1AB4 A;  3M3Y C;  4BBR K;  5IP7 C;  2PMZ L;  1Y1V A;  2ZJP S;  5D4D A;  4G0U A;  2NVQ C;  2L5N A;  1B4A A;  5C4J K;  3LYW A;  5DM7 S;  1ZBS A;  4A3C K;  3S16 K;  4QIW L;  4A3J C;  1XZP B;  3TTG A;  1ZXO A;  4LR2 A;  1WQF A;  4A3F K;  5M5X K;  1UV7 A;  5JVH S;  4BBR C;  4A3M K;  2FQT A;  3LPX A;  3GTG C;  2PHC B;  4A3B K;  3AH5 A;  1DCO A;  1WOS A;  3GTJ K;  5C4J C;  4KMU A;  1I50 A;  5IOT A;  4O2D A;  3HOZ K;  4BXX C;  3GTO A;  4G0W A;  1SFO C;  4LJZ A;  3HOY C;  1USM A;  2VUM A;  3H0G K;  4LOW A;  3OEP A;  5C3E K;  3S15 K;  2R7Z C;  1TWA C;  1EH1 A;  1Y1W C;  3QX3 A;  5HQH A;  4GZY A;  1G51 A;  3FKI A;  3HOZ C;  3PO3 C;  4MQ9 A;  5C3E C;  4C3I C;  4C45 A;  4C3H K;  2YU9 A;  2E2J K;  4GT9 A;  3GTL A;  5FLM C;  4IOC S;  3IPJ A;  1JVI A;  4QJV B;  4C3J K;  4GTB A;  5IYB C;  4KM8 A;  1XZP A;  4P9S A;  2Y3P A;  1IE0 A;  1BDF A;  3MML B;  2E2H C;  1J6W A;  4AYB D;  4WF9 S;  4WFB S;  3AQP A;  2R92 K;  2ZUE A;  3PIO S;  4KC6 A;  4BLB A;  3RZD C;  4PAB A;  4A3E K;  2V6S A;  4C3J C;  1YCL A;  2XCO A;  5DM6 S;  4G7H A;  4XLN A;  3T01 A;  1TWH K;  3M4O K;  4BLA A;  3I4N C;  4Y7N K;  3TFH A;  4DDQ A;  5JFE A;  4LLG A;  3AD7 C;  2R92 C;  4A3D K;  3HKZ L;  1VGX A;  1PJ7 A; 
#chains in the Genus database with same CATH homology
 4MEY A;  4BXX K;  4BY1 K;  2Y0S L;  2NVX K;  3PO2 C;  3HKZ D;  1I3Q C;  3WOD A;  2B63 C;  1I6V A;  3GTM C;  1SFO K;  2JA6 K;  4YG2 A;  3H3V L;  3HOY K;  2Y0S D;  3H3V D;  2JA8 K;  4BBS C;  4A3J K;  2R7Z K;  1TWH C;  4C3H C;  1TWA K;  1SMY A;  4BY7 C;  2NVY C;  3S1N C;  2PA8 L;  2E2J C;  4LK0 A;  4Y7N C;  3RZO C;  3S17 C;  2R93 C;  5M3M K;  3S1R K;  2A6E A;  2PA8 D;  4G7O A;  2NVT C;  4Q5S A;  1ZYR A;  3M3Y C;  1I6H C;  2CW0 A;  4BBR K;  5IP7 C;  2PMZ L;  2JA7 K;  3HOV C;  5D4D A;  4C2M C;  2JA5 C;  2NVQ C;  2PMZ D;  4A3D K;  2JA6 C;  5TMF A;  3CQZ K;  5C4J K;  2WAQ D;  2PPB A;  4A3I C;  3PO3 K;  4A3C K;  2E2I C;  4A93 K;  1I50 K;  4X6A K;  3S16 K;  4QIW L;  4A3J C;  4C3I K;  4QJV A;  5TMC A;  2O5J A;  4ZH4 A;  4QIW D;  5FLM K;  4A3F K;  5M5X K;  4XSX A;  3GTO K;  4NOI A;  4Y52 K;  4BBR C;  4A3E C;  5IYD K;  4OIQ A;  4A3M K;  4OIO A;  3GTG C;  5IYB K;  3HOW K;  1TWC K;  3HOV K;  4A3B K;  1Y1W K;  3HOX K;  3CQZ C;  3GTJ K;  4JK1 A;  4YFX A;  1TWG K;  5C4J C;  3M4O C;  3GTQ K;  2E2H K;  4KMU A;  3I4M C;  4X6A C;  1K83 K;  1R9T K;  2O5I A;  4A3D C;  3S2H C;  1Y1V C;  4BXX C;  1TWF K;  4BY1 C;  4MEX A;  3FKI K;  2NVX C;  2WAQ L;  3RZD K;  3HOZ K;  4Y52 C;  1SFO C;  4LJZ A;  3HOY C;  3H0G K;  3S1M K;  4A3G K;  5C3E K;  3S15 K;  1TWC C;  1WCM K;  2R7Z C;  5FJ8 K;  1TWA C;  3I4N K;  1HQM A;  1Y1W C;  2JA8 C;  1K83 C;  4A3K K;  3S1R C;  4GZY A;  5IP9 K;  2JA7 C;  3DXJ A;  2VUM K;  1XPP A;  3HOZ C;  2BE5 A;  3PO2 K;  2B63 K;  2WB1 L;  3GTM K;  5M5W K;  5C44 K;  2WB1 D;  3PO3 C;  4MQ9 A;  3S1M C;  4A3C C;  4A3G C;  5C3E C;  1I50 C;  4A93 C;  3GTP K;  3S2D K;  3S16 C;  4BBS K;  4C3I C;  2A6H A;  4XLP A;  4C3H K;  2NVY K;  3S1N K;  4OIR A;  2E2J K;  3RZO K;  4XSZ A;  1IW7 A;  3S17 K;  5FLM C;  4A3F C;  3S14 K;  4OIN A;  4Q4Z A;  3GTO C;  5C4X K;  3HOU K;  4QJV B;  4C3J K;  5IP7 K;  5IYD C;  4A3M C;  2A69 A;  3EQL A;  5M3F K;  2VUM C;  4C2M K;  2JA5 K;  5IYB C;  3HOW C;  4A3B C;  2NVQ K;  4A3L K;  3HOX C;  3GTJ C;  1BDF A;  1TWG C;  4OIP A;  5C44 C;  4AYB L;  3GTQ C;  1YNN A;  2E2H C;  5M5Y K;  4A3I K;  2E2I K;  3GTP C;  3S2D C;  4AYB D;  3GTL K;  1R9T C;  3K7A K;  2R92 K;  3S1Q K;  5IYC K;  3GTK K;  1TWF C;  3S14 C;  3FKI C;  3RZD C;  1I3Q K;  5C4X C;  3HOU C;  4A3E K;  4C3J C;  2A68 A;  3H0G C;  4YFN A;  3GTG K;  4G7Z A;  4G7H A;  1YNJ A;  3S15 C;  1WCM C;  4A3L C;  4XLN A;  1TWH K;  3M4O K;  2YU9 C;  4BY7 K;  3I4N C;  3I4M K;  4Y7N K;  2R93 K;  2YU9 K;  3GTL C;  4KN4 A;  1I6H K;  4A3K C;  2NVT K;  4LLG A;  3M3Y K;  4LK1 A;  5IP9 C;  3K7A C;  2R92 C;  4YFK A;  3S1Q C;  5IYC C;  3HKZ L;  4KN7 A;  3S2H K;  3GTK C;  1Y1V K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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