4A3CC

Rna polymerase ii initial transcribing complex with a 5nt dna-rna hybrid
Total Genus 62
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
62
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1
publication title Structural basis of initial RNA polymerase II transcription.
pubmed doi rcsb
molecule tags Transcription
total genus 62
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-09-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 4a3cC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 4a3cC01
3K7AK 4KMUA 4C3JC 5IYDC 2JA8C 4C3JK 2JA8K 5IYDK 3HOVC 2O5JA 3HOVK 4C3IC 4C3IK 2E2IK 2A68A 4AYBL 1YNNA 3CQZC 1I3QC 4BXXC 1TWFC 4LLGA 4YFNA 3S2HC 1TWFK 3S2HK 4BXXK 2PA8D 5M3FK 3S1QC 4A3GK 3S1QK 1I50C 1TWCC 1I50K 3M4OC 1TWCK 5M3MK 3M4OK 4G7HA 3HOZC 4XSXA 3HOZK 3FKIC 2NVTC 3GTPC 3FKIK 3GTPK 3HOWK 4Y52K 3S1NC 2BE5A 3S1NK 4Y7NC 4AYBD 4A3FC 3S16C 4Y7NK 5IYBC 3GTLC 5IYBK 4A3FK 2O5IA 4A3KC 3GTLK 4A3KK 5M5XK 5IP9C 2B63C 3GTKC 5IP9K 2B63K 2NVXC 3GTKK 2VUMC 2VUMK 4G7OA 5C44C 2PMZL 5C44K 5IYCC 4LK1A 4XLPA 4Q5SA 5IYCK 3S17C 2WAQD 3GTMC 3S17K 3GTMK 4YFXA 4OIRA 3HOYC 3M3YC 4A3MC 4OIQA 4A3MK 3HOYK 3M3YK 3CQZK 1I3QK 4A3EC 4A3BC 4A3EK 4A3BK 4LK0A 1K83C 4YG2A 3PO3C 3PO3K 4OIOA 1IW7A 4X6AC 2WB1L 4NOIA 1TWHC 2NVTK 1TWHK 3RZDC 2A6EA 1SMYA 3GTQC 3I4MC 5M5YK 3RZDK 3GTQK 3I4MK 3GTGC 3GTGK 4A3JC 3GTOC 3DXJA 4XSZA 3H0GC 3S2DC 3H0GK 4A3JK 3GTOK 3S16K 3S2DK 2Y0SL 4C3HC 1ZYRA 4LJZA 4C3HK 3HOUC 3HKZL 5C4JC 3HOUK 5C4JK 2NVXK 4GZYA 3HOXC 2JA6C 3HOXK 2JA6K 2A6HA 2NVQC 2NVQK 1SFOC 4BY7C 1SFOK 4BY7K 4XLNA 4BY1C 2E2JC 3S15C 2E2JK 3S15K 2NVYC 2R7ZK 2NVYK 4QIWL 1TWAC 5M5WK 1TWAK 4MEYA 4MQ9A 2YU9C 2YU9K 4OIPA 1K83K 4G7ZA 1Y1VC 1Y1VK 2PMZD 1YNJA 5TMFA 2CW0A 2R92C 1XPPA 4JK1A 2R92K 3PO2C 4KN4A 4QJVB 3PO2K 4X6AK 4MEXA 4ZH4A 2JA5C 2JA5K 1I6VA 1TWGC 2A69A 4KN7A 4BBRC 1TWGK 4BBRK 5FJ8K 3WODA 5IP7C 5IP7K 3EQLA 2WB1D 1R9TC 3H3VL 3I4NC 1R9TK 3I4NK 3RZOC 4A3DC 3RZOK 4A3DK 4BBSC 2R93C 4BY1K 3GTJC 4A3GC 3GTJK 4BBSK 4QJVA 2R93K 3S1MC 4C2MC 3S1MK 4C2MK 2JA7C 2JA7K 2Y0SD 3S1RC 3S14C 3S1RK 3S14K 5D4DA 5TMCA 3HKZD 5C3EC 2PPBA 2E2HC 3HOWC 2WAQL 4Y52C 2E2IC 5C4XC 5C3EK 4A3CC 5C4XK 1WCMC 2E2HK 4OINA 1I6HC 1WCMK 4YFKA 4A3CK 1I6HK 1HQMA 3H3VD 5FLMK 1BDFA 4A3IC 1Y1WC 4A3LC 4A3IK 1Y1WK 4A3LK 2PA8L 4Q4ZA 5FLMC 2R7ZC 4QIWD 4A93C 4A93K 3K7AC
chains in the Genus database with same CATH superfamily
2PHCB 3K7AK 1SFOA 4C3JK 1BS2A 2ZJQS 3HOVC 4C3IC 4GTAA 3N0BA 4AYBL 2KPUA 3T02A 2XCOA 1I3QC 4BXXC 3BP8C 2PA8D 3GDZA 1Y1VA 1TWCC 1PJ6A 2FQOA 3GTPK 2R92A 4Y52K 3S1NK 4Y7NC 4AYBD 2ZJRS 1XZPA 3MMLB 4WILA 2O5IA 4A3KK 2EBBA 5L46A 5M5XK 3GTKC 1JQWA 4XCHA 3CF5S 3PIPS 5C44K 3OREA 4YFXA 3HOYK 4OIQA 3V4GA 4A3MK 1O27A 2YU9A 4A3EC 4A3BK 2L3UA 1F93A 4YG2A 3PO3C 4KM8A 4X6AC 1YX2A 4NOIA 1SMYA 5DM7S 5M5YK 2CFAA 3GTGK 3S16K 3H0GK 4C3HK 3G4CA 3HKZL 2NVXK 3HOXC 1AB4A 1J6WA 2A6HA 1WQGA 4C45A 3AQOA 4GTEA 1WOOA 2NVYK 1TWAC 2YU9K 2E2IA 1ZVUA 1DCHA 5JVHS 2GAHC 4IO9S 3GTKA 3N3YA 5JVGS 1YNJA 1XPPA 5IORA 4QJVB 3VA7A 2JA5K 1TWGK 4BBRK 3WODA 3CQZA 5IP7K 5TJ3A 3TTGA 1ZBSA 1TWFA 2KQ1A 3L4JA 4KASA 2R93C 1I50A 4BY1K 4BBSK 1O28A 3S1MC 2JA7C 3FKIA 2Y0SD 2E2HC 4KC6A 3PIOS 4Y52C 3SZZA 5C4XK 2E2IK 1F7UA 1XZQA 1I6HC 1DCPA 2P8TA 4YFKA 4BLBA 3IPJA 4A3CK 1O24A 2VUMA 1RU0A 4QIWD 1YCLA 4A93K 4G7ZA 3S0XA 5IYDK 2JA8C 4FM9A 3AD8C 2ZUFA 3HXAA 1EH1A 1TWAA 3TFHA 1TWFK 1K83A 3S2HK 5JVOA 3S1QK 1I50K 3M4OC 5M3MK 2KWAA 4G7HA 3HOZC 4GFQA 3FKIK 3HOWK 3S16C 4A3FK 5IYBC 3GTLC 2JH3A 4KB4A 2B63C 5IP9K 2NVXC 2VUMK 5IYCC 4LK1A 4XLPA 4Q5SA 3S17C 2WAQD 3GTMC 2CFAB 3M3YC 5IOQA 2KXYA 5EGEA 4KB2A 1WIHA 1WORA 3ADAC 2WB1L 1TWHC 3RZDC 3I4MC 3GTQK 3S2DC 4A3JK 3GTOK 3TFIA 4IOCS 3HOUK 5C4JK 2JA6C 1C0AA 1R9TA 2ZJPS 1USOA 2NVQK 4KDDA 5CHPA 4BY7C 1BGWA 1SFOK 4XLNA 1X31C 4BY1C 2E2JC 3S15C 3G4AA 3BUEA 5CJ9A 1L0WA 5M5WK 1GE9A 4GTFA 3LPXA 1Y1VK 3L4KA 2R92K 4JK1A 3PO2C 4MEXA 4ZH4A 1KQ4A 1I6VA 2RH6A 1I3QA 1XZQB 2GSUA 2GSOA 3T01A 3H3VL 1WSVA 5HL7S 1USMA 1IQ0A 4WCES 1R9TK 3RZOC 4A3DC 3I4NK 3GTJC 1TWCA 1UV7A 3A8KA 4PAAA 4C2MK 3S14C 3S1RC 1FEUA 3HKZD 3GIRA 2PPBA 3HOWC 5C3EK 1WCMC 4OINA 3A8IA 3H3VD 4A3IC 1Y1WC 4A3LC 1B4AA 2JA6A 4Q4ZA 3OPFA 2V6SA 5FLMC 1HI9A 2R7ZC 3AD9C 3K7AC 3GSIA 4KMUA 4C3JC 3LAJA 2O5JA 3HOVK 4C3IK 4J3NA 2Y3PA 4BXXK 4YFNA 4A3GK 3AD7C 1O2FB 1TWCK 4XSXA 4PABA 3GTPC 2V6TA 3S1NC 2BE5A 4Y7NK 4FZBA 4A3KC 4RMFA 4WJ3M 3GTKK 3TFJA 1WOSA 4G7OA 1BJTA 5C44C 2PMZL 1IS1A 5JFEA 1J6XA 2ZUEA 3GTJA 3LYWA 2ZFZA 1O2AA 3FOFA 3HOYC 4A3MC 4P5AA 1XZPB 3CQZK 5E68A 4A3BC 1O25A 4A3EK 4LK0A 1WCMA 3PO3K 3QX3A 5IOTA 4G0VA 4X6AK 1Y1WA 2NVTK 2L5NA 1WOPA 4GT9A 3GTGC 4KAWX 3DXJA 3GEHA 3H0GC 3ERED 2R7ZA 1EFWA 1VGXA 4C3HC 4LJZA 1XXCA 4GTDA 4GZYA 3HOXK 1F7VA 2R93A 4DDQA 4LR2A 1DCOA 2JA7A 2NVYC 1EQRA 2GAGC 4KARA 1TWAK 4MEYA 2YU9C 1ZXOA 2E2HA 4OIPA 1K83K 1IBAA 2RGRA 5TMFA 2CW0A 2JA5C 1F9NA 1VJEA 1TWGC 4BBRC 3NUHA 5IP7C 1B4BA 3EQLA 2WB1D 5HL8A 4BBSC 3FOEA 2R93K 4A3GC 3S1MK 2JA7K 3T00A 4M1XA 5D4DA 3GTGA 1VRQC 2E2HK 2E2IC 5C4XC 3H0GA 1O2BA 4A3CC 3GTLA 1ISEA 1J98A 1I6HK 2B63A 2NVXA 1BDFA 5EGHA 4G0UA 1G51A 2XCRB 4A93C 3AH5A 5IYDC 3GTMA 2JA8K 5HQHA 4LOWA 2NVYA 2W7VA 2A68A 1INNA 3A8JA 5IOSA 1YNNA 3CQZC 3JSTA 4KMHA 1TWFC 4LLGA 3S2HC 4AH6A 2GSNA 5M3FK 3S1QC 1JVIA 1I50C 4WF9S 3M4OK 1TWHA 3HOZK 3DLLS 3BP3A 3FKIC 2NVTC 2D6FC 4BLAA 2XCQA 4KATA 4A3FC 1ZQ1C 5IYBK 3GTLK 2JA5A 4GTCA 1TWGA 1J6VA 3OEPA 5IP9C 2B63K 1DD5A 2VUMC 1JOEA 2FQTA 4P5BA 1IL2A 4WFAS 4WFBS 5IYCK 3S17K 1EK8A 3GTMK 4OIRA 3M3YK 4KMDA 1I3QK 1K83C 4OIOA 1IW7A 1V5VA 2P5MA 1TWHK 4G0WA 2A6EA 3RZDK 3GTQC 1WQFA 3I4MK 4A3JC 3GTOC 4XSZA 3S2DK 4BKWA 2Y0SL 1ZYRA 3HOUC 5C4JC 1O26A 1WSRA 1IE0A 4U67S 2JA6K 3GEEA 2NVQC 1XXAA 1SFOC 4ILDA 4BY7K 3LAPA 1VH2A 3CAGA 2E2JK 3S15K 5DM6S 4QIWL 3N0CA 2V6UA 4MQ9A 4WJ4A 4O2DA 1VLOA 4LQYA 1Y1VC 1EI6A 3GEIA 2PMZD 2R92C 4GTLA 4KN4A 3PO2K 3FHZA 3SZYA 3Q3QA 1PJ5A 1PJ7A 2A69A 4KN7A 4WFNS 4GTBA 5FJ8K 4KM9A 1R9TC 3I4NC 3RZOK 4A3DK 3GTJK 4QJVA 1XXBA 4C2MC 4P9SA 3GTPA 3S14K 3S1RK 3GTQA 5TMCA 5C3EC 2WAQL 3GTOA 4IOAS 1WQHA 1WCMK 1HQMA 4A3IK 1Y1WK 4KMAA 4A3LK 2PA8L 3AQPA 1O29A 5FLMK 2R7ZK
chains in the Genus database with same CATH topology
3K7AK 4KMUA 4C3JC 5IYDC 2JA8C 4C3JK 2JA8K 5IYDK 3HOVC 2O5JA 3HOVK 4C3IC 4C3IK 2E2IK 2A68A 4AYBL 1YNNA 3CQZC 1I3QC 4BXXC 1TWFC 4LLGA 4YFNA 3S2HC 1TWFK 3S2HK 4BXXK 2PA8D 5M3FK 3S1QC 4A3GK 3S1QK 1I50C 1TWCC 1I50K 3M4OC 1TWCK 5M3MK 3M4OK 4G7HA 3HOZC 4XSXA 3HOZK 3FKIC 2NVTC 3GTPC 3FKIK 3GTPK 3HOWK 4Y52K 3S1NC 2BE5A 3S1NK 4Y7NC 4AYBD 4A3FC 3S16C 4Y7NK 5IYBC 3GTLC 5IYBK 4A3FK 2O5IA 4A3KC 3GTLK 4A3KK 5M5XK 5IP9C 2B63C 3GTKC 5IP9K 2B63K 2NVXC 3GTKK 2VUMC 2VUMK 4G7OA 5C44C 2PMZL 5C44K 5IYCC 4LK1A 4XLPA 4Q5SA 5IYCK 3S17C 2WAQD 3GTMC 3S17K 3GTMK 4YFXA 4OIRA 3HOYC 3M3YC 4A3MC 4OIQA 4A3MK 3HOYK 3M3YK 3CQZK 1I3QK 4A3EC 4A3BC 4A3EK 4A3BK 4LK0A 1K83C 4YG2A 3PO3C 3PO3K 4OIOA 1IW7A 4X6AC 2WB1L 4NOIA 1TWHC 2NVTK 1TWHK 3RZDC 2A6EA 1SMYA 3GTQC 3I4MC 5M5YK 3RZDK 3GTQK 3I4MK 3GTGC 3GTGK 4A3JC 3GTOC 3DXJA 4XSZA 3H0GC 3S2DC 3H0GK 4A3JK 3GTOK 3S16K 3S2DK 2Y0SL 4C3HC 1ZYRA 4LJZA 4C3HK 3HOUC 3HKZL 5C4JC 3HOUK 5C4JK 2NVXK 4GZYA 3HOXC 2JA6C 3HOXK 2JA6K 2A6HA 2NVQC 2NVQK 1SFOC 4BY7C 1SFOK 4BY7K 4XLNA 4BY1C 2E2JC 3S15C 2E2JK 3S15K 2NVYC 2R7ZK 2NVYK 4QIWL 1TWAC 5M5WK 1TWAK 4MEYA 4MQ9A 2YU9C 2YU9K 4OIPA 1K83K 4G7ZA 1Y1VC 1Y1VK 2PMZD 1YNJA 5TMFA 2CW0A 2R92C 1XPPA 4JK1A 2R92K 3PO2C 4KN4A 4QJVB 3PO2K 4X6AK 4MEXA 4ZH4A 2JA5C 2JA5K 1I6VA 1TWGC 2A69A 4KN7A 4BBRC 1TWGK 4BBRK 5FJ8K 3WODA 5IP7C 5IP7K 3EQLA 2WB1D 1R9TC 3H3VL 3I4NC 1R9TK 3I4NK 3RZOC 4A3DC 3RZOK 4A3DK 4BBSC 2R93C 4BY1K 3GTJC 4A3GC 3GTJK 4BBSK 4QJVA 2R93K 3S1MC 4C2MC 3S1MK 4C2MK 2JA7C 2JA7K 2Y0SD 3S1RC 3S14C 3S1RK 3S14K 5D4DA 5TMCA 3HKZD 5C3EC 2PPBA 2E2HC 3HOWC 2WAQL 4Y52C 2E2IC 5C4XC 5C3EK 4A3CC 5C4XK 1WCMC 2E2HK 4OINA 1I6HC 1WCMK 4YFKA 4A3CK 1I6HK 1HQMA 3H3VD 5FLMK 1BDFA 4A3IC 1Y1WC 4A3LC 4A3IK 1Y1WK 4A3LK 2PA8L 4Q4ZA 5FLMC 2R7ZC 4QIWD 4A93C 4A93K 3K7AC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3K7A K;  4KMU A;  4C3J C;  5IYD C;  2JA8 C;  4C3J K;  2JA8 K;  5IYD K;  3HOV C;  2O5J A;  3HOV K;  4C3I C;  4C3I K;  2E2I K;  2A68 A;  4AYB L;  1YNN A;  3CQZ C;  1I3Q C;  4BXX C;  1TWF C;  4LLG A;  4YFN A;  3S2H C;  1TWF K;  3S2H K;  4BXX K;  2PA8 D;  5M3F K;  3S1Q C;  4A3G K;  3S1Q K;  1I50 C;  1TWC C;  1I50 K;  3M4O C;  1TWC K;  5M3M K;  3M4O K;  4G7H A;  3HOZ C;  4XSX A;  3HOZ K;  3FKI C;  2NVT C;  3GTP C;  3FKI K;  3GTP K;  3HOW K;  4Y52 K;  3S1N C;  2BE5 A;  3S1N K;  4Y7N C;  4AYB D;  4A3F C;  3S16 C;  4Y7N K;  5IYB C;  3GTL C;  5IYB K;  4A3F K;  2O5I A;  4A3K C;  3GTL K;  4A3K K;  5M5X K;  5IP9 C;  2B63 C;  3GTK C;  5IP9 K;  2B63 K;  2NVX C;  3GTK K;  2VUM C;  2VUM K;  4G7O A;  5C44 C;  2PMZ L;  5C44 K;  5IYC C;  4LK1 A;  4XLP A;  4Q5S A;  5IYC K;  3S17 C;  2WAQ D;  3GTM C;  3S17 K;  3GTM K;  4YFX A;  4OIR A;  3HOY C;  3M3Y C;  4A3M C;  4OIQ A;  4A3M K;  3HOY K;  3M3Y K;  3CQZ K;  1I3Q K;  4A3E C;  4A3B C;  4A3E K;  4A3B K;  4LK0 A;  1K83 C;  4YG2 A;  3PO3 C;  3PO3 K;  4OIO A;  1IW7 A;  4X6A C;  2WB1 L;  4NOI A;  1TWH C;  2NVT K;  1TWH K;  3RZD C;  2A6E A;  1SMY A;  3GTQ C;  3I4M C;  5M5Y K;  3RZD K;  3GTQ K;  3I4M K;  3GTG C;  3GTG K;  4A3J C;  3GTO C;  3DXJ A;  4XSZ A;  3H0G C;  3S2D C;  3H0G K;  4A3J K;  3GTO K;  3S16 K;  3S2D K;  2Y0S L;  4C3H C;  1ZYR A;  4LJZ A;  4C3H K;  3HOU C;  3HKZ L;  5C4J C;  3HOU K;  5C4J K;  2NVX K;  4GZY A;  3HOX C;  2JA6 C;  3HOX K;  2JA6 K;  2A6H A;  2NVQ C;  2NVQ K;  1SFO C;  4BY7 C;  1SFO K;  4BY7 K;  4XLN A;  4BY1 C;  2E2J C;  3S15 C;  2E2J K;  3S15 K;  2NVY C;  2R7Z K;  2NVY K;  4QIW L;  1TWA C;  5M5W K;  1TWA K;  4MEY A;  4MQ9 A;  2YU9 C;  2YU9 K;  4OIP A;  1K83 K;  4G7Z A;  1Y1V C;  1Y1V K;  2PMZ D;  1YNJ A;  5TMF A;  2CW0 A;  2R92 C;  1XPP A;  4JK1 A;  2R92 K;  3PO2 C;  4KN4 A;  4QJV B;  3PO2 K;  4X6A K;  4MEX A;  4ZH4 A;  2JA5 C;  2JA5 K;  1I6V A;  1TWG C;  2A69 A;  4KN7 A;  4BBR C;  1TWG K;  4BBR K;  5FJ8 K;  3WOD A;  5IP7 C;  5IP7 K;  3EQL A;  2WB1 D;  1R9T C;  3H3V L;  3I4N C;  1R9T K;  3I4N K;  3RZO C;  4A3D C;  3RZO K;  4A3D K;  4BBS C;  2R93 C;  4BY1 K;  3GTJ C;  4A3G C;  3GTJ K;  4BBS K;  4QJV A;  2R93 K;  3S1M C;  4C2M C;  3S1M K;  4C2M K;  2JA7 C;  2JA7 K;  2Y0S D;  3S1R C;  3S14 C;  3S1R K;  3S14 K;  5D4D A;  5TMC A;  3HKZ D;  5C3E C;  2PPB A;  2E2H C;  3HOW C;  2WAQ L;  4Y52 C;  2E2I C;  5C4X C;  5C3E K;  4A3C C;  5C4X K;  1WCM C;  2E2H K;  4OIN A;  1I6H C;  1WCM K;  4YFK A;  4A3C K;  1I6H K;  1HQM A;  3H3V D;  5FLM K;  1BDF A;  4A3I C;  1Y1W C;  4A3L C;  4A3I K;  1Y1W K;  4A3L K;  2PA8 L;  4Q4Z A;  5FLM C;  2R7Z C;  4QIW D;  4A93 C;  4A93 K;  3K7A C; 
#chains in the Genus database with same CATH topology
 2PHC B;  3K7A K;  1SFO A;  4C3J K;  1BS2 A;  2ZJQ S;  3HOV C;  4C3I C;  4GTA A;  3N0B A;  4AYB L;  2KPU A;  3T02 A;  2XCO A;  1I3Q C;  4BXX C;  3BP8 C;  2PA8 D;  3GDZ A;  1Y1V A;  1TWC C;  1PJ6 A;  2FQO A;  3GTP K;  2R92 A;  4Y52 K;  3S1N K;  4Y7N C;  4AYB D;  2ZJR S;  1XZP A;  3MML B;  4WIL A;  2O5I A;  4A3K K;  2EBB A;  5L46 A;  5M5X K;  3GTK C;  1JQW A;  4XCH A;  3CF5 S;  3PIP S;  5C44 K;  3ORE A;  4YFX A;  3HOY K;  4OIQ A;  3V4G A;  4A3M K;  1O27 A;  2YU9 A;  4A3E C;  4A3B K;  2L3U A;  1F93 A;  4YG2 A;  3PO3 C;  4KM8 A;  4X6A C;  1YX2 A;  4NOI A;  1SMY A;  5DM7 S;  5M5Y K;  2CFA A;  3GTG K;  3S16 K;  3H0G K;  4C3H K;  3G4C A;  3HKZ L;  2NVX K;  3HOX C;  1AB4 A;  1J6W A;  2A6H A;  1WQG A;  4C45 A;  3AQO A;  4GTE A;  1WOO A;  2NVY K;  1TWA C;  2YU9 K;  2E2I A;  1ZVU A;  1DCH A;  5JVH S;  2GAH C;  4IO9 S;  3GTK A;  3N3Y A;  5JVG S;  1YNJ A;  1XPP A;  5IOR A;  4QJV B;  3VA7 A;  2JA5 K;  1TWG K;  4BBR K;  3WOD A;  3CQZ A;  5IP7 K;  5TJ3 A;  3TTG A;  1ZBS A;  1TWF A;  2KQ1 A;  3L4J A;  4KAS A;  2R93 C;  1I50 A;  4BY1 K;  4BBS K;  1O28 A;  3S1M C;  2JA7 C;  3FKI A;  2Y0S D;  2E2H C;  4KC6 A;  3PIO S;  4Y52 C;  3SZZ A;  5C4X K;  2E2I K;  1F7U A;  1XZQ A;  1I6H C;  1DCP A;  2P8T A;  4YFK A;  4BLB A;  3IPJ A;  4A3C K;  1O24 A;  2VUM A;  1RU0 A;  4QIW D;  1YCL A;  4A93 K;  4G7Z A;  3S0X A;  5IYD K;  2JA8 C;  4FM9 A;  3AD8 C;  2ZUF A;  3HXA A;  1EH1 A;  1TWA A;  3TFH A;  1TWF K;  1K83 A;  3S2H K;  5JVO A;  3S1Q K;  1I50 K;  3M4O C;  5M3M K;  2KWA A;  4G7H A;  3HOZ C;  4GFQ A;  3FKI K;  3HOW K;  3S16 C;  4A3F K;  5IYB C;  3GTL C;  2JH3 A;  4KB4 A;  2B63 C;  5IP9 K;  2NVX C;  2VUM K;  5IYC C;  4LK1 A;  4XLP A;  4Q5S A;  3S17 C;  2WAQ D;  3GTM C;  2CFA B;  3M3Y C;  5IOQ A;  2KXY A;  5EGE A;  4KB2 A;  1WIH A;  1WOR A;  3ADA C;  2WB1 L;  1TWH C;  3RZD C;  3I4M C;  3GTQ K;  3S2D C;  4A3J K;  3GTO K;  3TFI A;  4IOC S;  3HOU K;  5C4J K;  2JA6 C;  1C0A A;  1R9T A;  2ZJP S;  1USO A;  2NVQ K;  4KDD A;  5CHP A;  4BY7 C;  1BGW A;  1SFO K;  4XLN A;  1X31 C;  4BY1 C;  2E2J C;  3S15 C;  3G4A A;  3BUE A;  5CJ9 A;  1L0W A;  5M5W K;  1GE9 A;  4GTF A;  3LPX A;  1Y1V K;  3L4K A;  2R92 K;  4JK1 A;  3PO2 C;  4MEX A;  4ZH4 A;  1KQ4 A;  1I6V A;  2RH6 A;  1I3Q A;  1XZQ B;  2GSU A;  2GSO A;  3T01 A;  3H3V L;  1WSV A;  5HL7 S;  1USM A;  1IQ0 A;  4WCE S;  1R9T K;  3RZO C;  4A3D C;  3I4N K;  3GTJ C;  1TWC A;  1UV7 A;  3A8K A;  4PAA A;  4C2M K;  3S14 C;  3S1R C;  1FEU A;  3HKZ D;  3GIR A;  2PPB A;  3HOW C;  5C3E K;  1WCM C;  4OIN A;  3A8I A;  3H3V D;  4A3I C;  1Y1W C;  4A3L C;  1B4A A;  2JA6 A;  4Q4Z A;  3OPF A;  2V6S A;  5FLM C;  1HI9 A;  2R7Z C;  3AD9 C;  3K7A C;  3GSI A;  4KMU A;  4C3J C;  3LAJ A;  2O5J A;  3HOV K;  4C3I K;  4J3N A;  2Y3P A;  4BXX K;  4YFN A;  4A3G K;  3AD7 C;  1O2F B;  1TWC K;  4XSX A;  4PAB A;  3GTP C;  2V6T A;  3S1N C;  2BE5 A;  4Y7N K;  4FZB A;  4A3K C;  4RMF A;  4WJ3 M;  3GTK K;  3TFJ A;  1WOS A;  4G7O A;  1BJT A;  5C44 C;  2PMZ L;  1IS1 A;  5JFE A;  1J6X A;  2ZUE A;  3GTJ A;  3LYW A;  2ZFZ A;  1O2A A;  3FOF A;  3HOY C;  4A3M C;  4P5A A;  1XZP B;  3CQZ K;  5E68 A;  4A3B C;  1O25 A;  4A3E K;  4LK0 A;  1WCM A;  3PO3 K;  3QX3 A;  5IOT A;  4G0V A;  4X6A K;  1Y1W A;  2NVT K;  2L5N A;  1WOP A;  4GT9 A;  3GTG C;  4KAW X;  3DXJ A;  3GEH A;  3H0G C;  3ERE D;  2R7Z A;  1EFW A;  1VGX A;  4C3H C;  4LJZ A;  1XXC A;  4GTD A;  4GZY A;  3HOX K;  1F7V A;  2R93 A;  4DDQ A;  4LR2 A;  1DCO A;  2JA7 A;  2NVY C;  1EQR A;  2GAG C;  4KAR A;  1TWA K;  4MEY A;  2YU9 C;  1ZXO A;  2E2H A;  4OIP A;  1K83 K;  1IBA A;  2RGR A;  5TMF A;  2CW0 A;  2JA5 C;  1F9N A;  1VJE A;  1TWG C;  4BBR C;  3NUH A;  5IP7 C;  1B4B A;  3EQL A;  2WB1 D;  5HL8 A;  4BBS C;  3FOE A;  2R93 K;  4A3G C;  3S1M K;  2JA7 K;  3T00 A;  4M1X A;  5D4D A;  3GTG A;  1VRQ C;  2E2H K;  2E2I C;  5C4X C;  3H0G A;  1O2B A;  4A3C C;  3GTL A;  1ISE A;  1J98 A;  1I6H K;  2B63 A;  2NVX A;  1BDF A;  5EGH A;  4G0U A;  1G51 A;  2XCR B;  4A93 C;  3AH5 A;  5IYD C;  3GTM A;  2JA8 K;  5HQH A;  4LOW A;  2NVY A;  2W7V A;  2A68 A;  1INN A;  3A8J A;  5IOS A;  1YNN A;  3CQZ C;  3JST A;  4KMH A;  1TWF C;  4LLG A;  3S2H C;  4AH6 A;  2GSN A;  5M3F K;  3S1Q C;  1JVI A;  1I50 C;  4WF9 S;  3M4O K;  1TWH A;  3HOZ K;  3DLL S;  3BP3 A;  3FKI C;  2NVT C;  2D6F C;  4BLA A;  2XCQ A;  4KAT A;  4A3F C;  1ZQ1 C;  5IYB K;  3GTL K;  2JA5 A;  4GTC A;  1TWG A;  1J6V A;  3OEP A;  5IP9 C;  2B63 K;  1DD5 A;  2VUM C;  1JOE A;  2FQT A;  4P5B A;  1IL2 A;  4WFA S;  4WFB S;  5IYC K;  3S17 K;  1EK8 A;  3GTM K;  4OIR A;  3M3Y K;  4KMD A;  1I3Q K;  1K83 C;  4OIO A;  1IW7 A;  1V5V A;  2P5M A;  1TWH K;  4G0W A;  2A6E A;  3RZD K;  3GTQ C;  1WQF A;  3I4M K;  4A3J C;  3GTO C;  4XSZ A;  3S2D K;  4BKW A;  2Y0S L;  1ZYR A;  3HOU C;  5C4J C;  1O26 A;  1WSR A;  1IE0 A;  4U67 S;  2JA6 K;  3GEE A;  2NVQ C;  1XXA A;  1SFO C;  4ILD A;  4BY7 K;  3LAP A;  1VH2 A;  3CAG A;  2E2J K;  3S15 K;  5DM6 S;  4QIW L;  3N0C A;  2V6U A;  4MQ9 A;  4WJ4 A;  4O2D A;  1VLO A;  4LQY A;  1Y1V C;  1EI6 A;  3GEI A;  2PMZ D;  2R92 C;  4GTL A;  4KN4 A;  3PO2 K;  3FHZ A;  3SZY A;  3Q3Q A;  1PJ5 A;  1PJ7 A;  2A69 A;  4KN7 A;  4WFN S;  4GTB A;  5FJ8 K;  4KM9 A;  1R9T C;  3I4N C;  3RZO K;  4A3D K;  3GTJ K;  4QJV A;  1XXB A;  4C2M C;  4P9S A;  3GTP A;  3S14 K;  3S1R K;  3GTQ A;  5TMC A;  5C3E C;  2WAQ L;  3GTO A;  4IOA S;  1WQH A;  1WCM K;  1HQM A;  4A3I K;  1Y1W K;  4KMA A;  4A3L K;  2PA8 L;  3AQP A;  1O29 A;  5FLM K;  2R7Z K; 
#chains in the Genus database with same CATH homology
 3K7A K;  4KMU A;  4C3J C;  5IYD C;  2JA8 C;  4C3J K;  2JA8 K;  5IYD K;  3HOV C;  2O5J A;  3HOV K;  4C3I C;  4C3I K;  2E2I K;  2A68 A;  4AYB L;  1YNN A;  3CQZ C;  1I3Q C;  4BXX C;  1TWF C;  4LLG A;  4YFN A;  3S2H C;  1TWF K;  3S2H K;  4BXX K;  2PA8 D;  5M3F K;  3S1Q C;  4A3G K;  3S1Q K;  1I50 C;  1TWC C;  1I50 K;  3M4O C;  1TWC K;  5M3M K;  3M4O K;  4G7H A;  3HOZ C;  4XSX A;  3HOZ K;  3FKI C;  2NVT C;  3GTP C;  3FKI K;  3GTP K;  3HOW K;  4Y52 K;  3S1N C;  2BE5 A;  3S1N K;  4Y7N C;  4AYB D;  4A3F C;  3S16 C;  4Y7N K;  5IYB C;  3GTL C;  5IYB K;  4A3F K;  2O5I A;  4A3K C;  3GTL K;  4A3K K;  5M5X K;  5IP9 C;  2B63 C;  3GTK C;  5IP9 K;  2B63 K;  2NVX C;  3GTK K;  2VUM C;  2VUM K;  4G7O A;  5C44 C;  2PMZ L;  5C44 K;  5IYC C;  4LK1 A;  4XLP A;  4Q5S A;  5IYC K;  3S17 C;  2WAQ D;  3GTM C;  3S17 K;  3GTM K;  4YFX A;  4OIR A;  3HOY C;  3M3Y C;  4A3M C;  4OIQ A;  4A3M K;  3HOY K;  3M3Y K;  3CQZ K;  1I3Q K;  4A3E C;  4A3B C;  4A3E K;  4A3B K;  4LK0 A;  1K83 C;  4YG2 A;  3PO3 C;  3PO3 K;  4OIO A;  1IW7 A;  4X6A C;  2WB1 L;  4NOI A;  1TWH C;  2NVT K;  1TWH K;  3RZD C;  2A6E A;  1SMY A;  3GTQ C;  3I4M C;  5M5Y K;  3RZD K;  3GTQ K;  3I4M K;  3GTG C;  3GTG K;  4A3J C;  3GTO C;  3DXJ A;  4XSZ A;  3H0G C;  3S2D C;  3H0G K;  4A3J K;  3GTO K;  3S16 K;  3S2D K;  2Y0S L;  4C3H C;  1ZYR A;  4LJZ A;  4C3H K;  3HOU C;  3HKZ L;  5C4J C;  3HOU K;  5C4J K;  2NVX K;  4GZY A;  3HOX C;  2JA6 C;  3HOX K;  2JA6 K;  2A6H A;  2NVQ C;  2NVQ K;  1SFO C;  4BY7 C;  1SFO K;  4BY7 K;  4XLN A;  4BY1 C;  2E2J C;  3S15 C;  2E2J K;  3S15 K;  2NVY C;  2R7Z K;  2NVY K;  4QIW L;  1TWA C;  5M5W K;  1TWA K;  4MEY A;  4MQ9 A;  2YU9 C;  2YU9 K;  4OIP A;  1K83 K;  4G7Z A;  1Y1V C;  1Y1V K;  2PMZ D;  1YNJ A;  5TMF A;  2CW0 A;  2R92 C;  1XPP A;  4JK1 A;  2R92 K;  3PO2 C;  4KN4 A;  4QJV B;  3PO2 K;  4X6A K;  4MEX A;  4ZH4 A;  2JA5 C;  2JA5 K;  1I6V A;  1TWG C;  2A69 A;  4KN7 A;  4BBR C;  1TWG K;  4BBR K;  5FJ8 K;  3WOD A;  5IP7 C;  5IP7 K;  3EQL A;  2WB1 D;  1R9T C;  3H3V L;  3I4N C;  1R9T K;  3I4N K;  3RZO C;  4A3D C;  3RZO K;  4A3D K;  4BBS C;  2R93 C;  4BY1 K;  3GTJ C;  4A3G C;  3GTJ K;  4BBS K;  4QJV A;  2R93 K;  3S1M C;  4C2M C;  3S1M K;  4C2M K;  2JA7 C;  2JA7 K;  2Y0S D;  3S1R C;  3S14 C;  3S1R K;  3S14 K;  5D4D A;  5TMC A;  3HKZ D;  5C3E C;  2PPB A;  2E2H C;  3HOW C;  2WAQ L;  4Y52 C;  2E2I C;  5C4X C;  5C3E K;  4A3C C;  5C4X K;  1WCM C;  2E2H K;  4OIN A;  1I6H C;  1WCM K;  4YFK A;  4A3C K;  1I6H K;  1HQM A;  3H3V D;  5FLM K;  1BDF A;  4A3I C;  1Y1W C;  4A3L C;  4A3I K;  1Y1W K;  4A3L K;  2PA8 L;  4Q4Z A;  5FLM C;  2R7Z C;  4QIW D;  4A93 C;  4A93 K;  3K7A C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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