5C44C

Crystal structure of a transcribing rna polymerase ii complex reveals a complete transcription bubble
Total Genus 50
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
50
sequence length
265
structure length
265
Chain Sequence
EGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase/dna/rna
molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Crystal Structure of a Transcribing RNA Polymerase II Complex Reveals a Complete Transcription Bubble.
pubmed doi rcsb
source organism Saccharomyces cerevisiae (strain atcc 204508 / s288c)
total genus 50
structure length 265
sequence length 265
ec nomenclature
pdb deposition date 2015-06-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 5c44C02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 5c44C01
3HOYK 4Y7NK 3FKIC 3S1RC 5IP9K 1K83C 2JA7K 3H0GK 3GTGK 1SMYA 4C3HC 4XSZA 3HOVC 4Q5SA 2YU9C 1BDFA 4A3BC 5IP7C 3K7AC 3S2HC 4YFNA 2WAQL 3HOXK 2NVTC 3HOZK 3S1MC 3GTPK 5C4XC 5D4DA 3S1NK 2Y0SD 2E2IC 3M3YK 4A3EK 4A3KK 2NVQK 1ZYRA 3WODA 4BBSK 3CQZC 2CW0A 5IYCC 3GTQK 3GTKK 1TWCC 2E2JK 2R93K 4C3IC 2WAQD 3GTOC 2JA6C 3RZOK 1TWAC 4GZYA 5TMFA 4OIPA 4A3MC 3H3VD 4A3CC 1TWHK 2PMZD 3S17C 1R9TK 1WCMC 1I3QC 3I4MK 3PO2K 1I50K 4MEXA 4BY7K 3HOWK 4A3IC 1HQMA 1I6HK 3EQLA 2JA5C 4BBRC 4A3JC 2NVXC 2NVYK 4MQ9A 1Y1VC 1SFOK 3S14K 3S15K 4C3JC 5IYBK 3GTLK 3RZDK 3HOUK 2R92C 3FKIK 1I6VA 4LJZA 2VUMC 2PA8L 3I4NC 3HOVK 4C3HK 5FLMC 3S1QC 4A3BK 5IP7K 3K7AK 3HOYC 3S2HK 4LLGA 4YFXA 5IP9C 2BE5A 2JA7C 3H0GC 3S1MK 1IW7A 2E2HC 4A93K 3GTJC 5C4JC 2JA8C 1YNNA 5C4XK 3S2DC 3S1QK 2E2IK 4BY1C 2R7ZC 4LK0A 2A68A 4A3GC 1Y1WC 5IYCK 3GTPC 5IYDK 2PA8D 2B63K 4OIQA 4BXXK 3S16K 4QJVB 4A3EC 4A3LK 4XSXA 5M3FK 2JA6K 1TWFC 2PPBA 2O5JA 4A3MK 4A3DC 4A3CK 2E2JC 2A6HA 1WCMK 4A3FK 5C3EK 5M5XK 4X6AC 1YNJA 4YFKA 4ZH4A 1I3QK 1Y1VK 3M4OC 3HKZL 4C2MK 5C44C 3GTMK 4A3IK 2JA5K 3S1RK 1TWGC 1K83K 4OIRA 4BBRK 2NVXK 4KN7A 4Y52C 3PO3C 4YG2A 5M3MK 1XPPA 2YU9K 4C3JK 3PO2C 4LK1A 4Y7NC 4BY7C 3HOWC 4QIWL 2NVTK 2A69A 3GTGC 2VUMK 3S16C 3HOUC 3I4NK 5IYBC 4JK1A 4MEYA 3GTLC 2Y0SL 3HKZD 3HOXC 5FJ8K 3CQZK 3DXJA 3HOZC 1TWCK 3S1NC 2WB1L 3GTMC 4G7HA 2E2HK 4C3IK 3GTJK 5C4JK 2JA8K 3M3YC 4OIOA 4NOIA 4A3KC 2NVQC 4BY1K 3GTOK 2R7ZK 3S2DK 4BBSC 1TWAK 4QIWD 3GTQC 3GTKC 4A3GK 1Y1WK 2PMZL 4OINA 4A93C 2R93C 3S17K 3H3VL 4AYBL 3RZOC 5M5YK 1TWFK 1TWHC 5IYDC 4KMUA 4A3JK 4A3DK 1R9TC 2WB1D 2B63C 5M5WK 4QJVA 4BXXC 3I4MC 2A6EA 4G7OA 1I50C 4XLNA 4A3LC 4X6AK 1I6HC 2R92K 3M4OK 5C44K 2NVYC 4Q4ZA 1TWGK 4G7ZA 3S14C 5TMCA 1SFOC 3S15C 4Y52K 4KN4A 4A3FC 3PO3K 5C3EC 5FLMK 3RZDC 2O5IA 4C2MC 4XLPA 4AYBD
chains in the Genus database with same CATH superfamily
3S1RC 1WIHA 1YX2A 1WQFA 1SMYA 4Q5SA 3Q3QA 2YU9C 2ZJPS 3AH5A 4YFNA 5IOQA 2ZJRS 5L46A 1ZBSA 4G0UA 5D4DA 1WQGA 2Y0SD 1TWCA 3M3YK 3GTOA 1X31C 3GTQK 4GT9A 3MMLB 2R93K 1Y1WA 2JA6C 3RZOK 1EK8A 5TMFA 4OIPA 1WOPA 4GTLA 2P5MA 1USMA 3PO2K 1I50K 3G4CA 4BY7K 4IO9S 4BBRC 1SFOK 3DLLS 3RZDK 1O2FB 2R92C 1L0WA 3GTGA 3S1QC 4LOWA 4KMDA 4YFXA 2BE5A 4A93K 5C4XK 2E2IK 4BY1C 2GAGC 3N0BA 2A68A 4WFNS 1JOEA 2B63K 3BP8C 1USOA 4QJVB 3N0CA 2RGRA 2GSOA 1TWFC 5DM7S 1XXBA 4A3FK 1I3QK 3HKZL 4YFKA 3GTMK 3LYWA 3VA7A 4A3IK 3GEHA 2FQTA 2JA5K 1TWGC 4OIRA 4KN7A 2ZUFA 5M3MK 1XPPA 4C3JK 3PO2C 4LK1A 4BY7C 1BJTA 2XCOA 2W7VA 3AD7C 4JK1A 4MEYA 2Y0SL 2Y3PA 5FJ8K 4KAWX 2FQOA 1TWCK 4DDQA 4C3IK 5C4JK 3GTOK 2NVQC 3ADAC 3GSIA 4P9SA 4J3NA 2GSUA 1Y1WK 2JH3A 4OINA 4A93C 4BKWA 3AQOA 1B4AA 5M5YK 1KQ4A 1PJ7A 4A3DK 1R9TC 2B63C 3A8IA 1IBAA 3I4MC 4KM9A 3TFHA 4XLNA 5C44K 1ZXOA 4G7ZA 3S15C 4Y52K 4KN4A 4A3FC 1K83A 1JQWA 3PO3K 4GTAA 3H3VD 4XLPA 3GTMC 3HOYK 3FKIC 1O26A 2L5NA 3GTGK 3HOVC 4C3HC 1BDFA 3ERED 3HOXK 1GE9A 2V6UA 3HOZK 5DM6S 3CQZA 3S1NK 1J6WA 4WILA 4A3EK 1ZYRA 1UV7A 3WODA 1VJEA 4BBSK 2CW0A 1IS1A 1TWCC 2E2JK 4C3IC 4GTDA 2WAQD 3GTOC 1XZQA 4A3MC 4AH6A 2XCRB 4A3CC 3LAPA 1WCMC 2EBBA 1WOOA 1PJ6A 2NVXC 4KMAA 1IL2A 3S14K 5EGEA 5IYBK 1O2AA 3HOUK 1O29A 3SZYA 3GEEA 4LJZA 3N3YA 2VUMC 3I4NC 3H0GA 5IOTA 4A3BK 5IP7K 3K7AK 3HOYC 3S2HK 2D6FC 2V6TA 2E2HC 3S1MK 3GTJC 3T01A 1YNNA 3GTPA 2R7ZC 4C45A 4A3GC 5IYCK 2PA8D 3GTKA 4OIQA 2KQ1A 4A3EC 4A3LK 1F7VA 1EI6A 2E2JC 1DD5A 2A6HA 1TWHA 4KC6A 4X6AC 3M4OC 5JVOA 2ZUEA 1K83K 2CFAA 2NVYA 4WJ4A 3TFIA 4QIWL 2NVTK 2A69A 4G0WA 4BLAA 5IYBC 3BUEA 3CQZK 3GIRA 1VRQC 2WB1L 3SZZA 1IE0A 2JA8K 3M3YC 3S2DK 1XZQB 4P5AA 3GTQC 4FZBA 2R93C 2PHCB 3S17K 1INNA 2ZFZA 3TFJA 3TTGA 3RZOC 1VH2A 4PAAA 3BP3A 2JA6A 1FEUA 1J6VA 1WQHA 4G7OA 1I50C 4A3LC 1WOSA 1Y1VA 5E68A 5TMCA 1SFOC 3T00A 5FLMK 1ISEA 3RZDC 5EGHA 4AYBD 4WJ3M 4Y7NK 1JVIA 1AB4A 2RH6A 1K83C 3H0GK 3S16K 4XSZA 4GTCA 4M1XA 2NVTC 3GDZA 4KB2A 3GTPK 5C4XC 1G51A 2E2IC 4A3KK 3LAJA 1PJ5A 3CQZC 2KPUA 3GTKK 1TWAA 1ZQ1C 4BLBA 3GEIA 1O27A 1VLOA 1EFWA 1TWHK 1TWFA 2PMZD 3S17C 2CFAB 4XCHA 1I3QC 3HOWK 4A3IC 1I6HK 2JA5C 3OPFA 2NVYK 4MQ9A 1TWGA 4C3JC 3NUHA 1I6VA 3AQPA 2JA7A 5FLMC 5IOSA 4GTBA 1VGXA 3H0GC 1IW7A 5C4JC 4G0VA 1J6XA 5CJ9A 2P8TA 3L4KA 4LK0A 1YCLA 3OREA 1Y1WC 3GTPC 4XSXA 2JA6K 3FHZA 4A3DC 3OEPA 3QX3A 5HQHA 4GFQA 5C3EK 1R9TA 1YNJA 1Y1VK 5C44C 4RMFA 1EH1A 5HL7S 4BBRK 4Y52C 3PO3C 4YG2A 1O2BA 4FM9A 3GTLA 3HOWC 3GTMA 3FKIA 4WFBS 3GTGC 3HKZD 3HOXC 3G4AA 3PIOS 3HOZC 2V6SA 3S1NC 4G7HA 5JFEA 4NOIA 4BY1K 4LR2A 4BBSC 1TWAK 2PMZL 3H3VL 5CHPA 1TWFK 1BGWA 4A3JK 3T02A 5M5WK 1DCHA 1WCMA 3IPJA 1V5VA 4O2DA 5JVGS 1TWGK 3S14C 4IOAS 5C3EC 2NVXA 2O5IA 1Y1VC 3HOUC 2YU9A 4GTFA 1BS2A 5IP9K 1WSVA 2JA7K 1O25A 2WAQL 4GTEA 4A3BC 4KATA 5IP7C 3K7AC 3S2HC 2VUMA 1WORA 2KWAA 4ILDA 3S1MC 1DCPA 1XXCA 1O24A 2E2HA 2GAHC 3GTJA 2NVQK 3AD9C 5IYCC 2R7ZA 1XZPA 4P5BA 1TWAC 4GZYA 4IOCS 1RU0A 1R9TK 3FOEA 3I4MK 4WFAS 4MEXA 1HQMA 3EQLA 4A3JC 2R92A 1O28A 3S15K 1EQRA 5IORA 1WSRA 3GTLK 1ZVUA 1DCOA 3FKIK 4KASA 2PA8L 3PIPS 4WCES 3HOVK 4C3HK 3CAGA 3V4GA 4LLGA 3S0XA 5IP9C 2JA7C 1C0AA 2JA8C 3JSTA 3S2DC 4LQYA 5TJ3A 1IQ0A 5IYDK 3GTQA 4KARA 1F93A 4BXXK 2R93A 3FOFA 5M3FK 2PPBA 2O5JA 4A3MK 4A3CK 3AD8C 3L4JA 3CF5S 1WCMK 5M5XK 4C2MK 4ZH4A 4PABA 1I50A 3S1RK 4WF9S 2NVXK 1F7UA 2YU9K 1SFOA 4Y7NC 1XXAA 2VUMK 3S16C 3I4NK 3GTLC 5JVHS 2XCQA 3DXJA 2E2HK 3GTJK 1XZPB 4OIOA 4A3KC 2R7ZK 2E2IA 4QIWD 3GTKC 1F9NA 4A3GK 2L3UA 1B4BA 3A8JA 3HXAA 2GSNA 1J98A 4AYBL 3LPXA 2B63A 4KB4A 1TWHC 5IYDC 4KMUA 4KMHA 2WB1D 4KDDA 4QJVA 4BXXC 2A6EA 4X6AK 1I6HC 1I3QA 2R92K 1HI9A 3M4OK 4U67S 2NVYC 4Q4ZA 2ZJQS 5HL8A 2JA5A 3A8KA 2KXYA 4KM8A 3S1QK 4C2MC
chains in the Genus database with same CATH topology
3HOYK 4Y7NK 3FKIC 3S1RC 5IP9K 1K83C 2JA7K 3H0GK 3GTGK 1SMYA 4C3HC 4XSZA 3HOVC 4Q5SA 2YU9C 1BDFA 4A3BC 5IP7C 3K7AC 3S2HC 4YFNA 2WAQL 3HOXK 2NVTC 3HOZK 3S1MC 3GTPK 5C4XC 5D4DA 3S1NK 2Y0SD 2E2IC 3M3YK 4A3EK 4A3KK 2NVQK 1ZYRA 3WODA 4BBSK 3CQZC 2CW0A 5IYCC 3GTQK 3GTKK 1TWCC 2E2JK 2R93K 4C3IC 2WAQD 3GTOC 2JA6C 3RZOK 1TWAC 4GZYA 5TMFA 4OIPA 4A3MC 3H3VD 4A3CC 1TWHK 2PMZD 3S17C 1R9TK 1WCMC 1I3QC 3I4MK 3PO2K 1I50K 4MEXA 4BY7K 3HOWK 4A3IC 1HQMA 1I6HK 3EQLA 2JA5C 4BBRC 4A3JC 2NVXC 2NVYK 4MQ9A 1Y1VC 1SFOK 3S14K 3S15K 4C3JC 5IYBK 3GTLK 3RZDK 3HOUK 2R92C 3FKIK 1I6VA 4LJZA 2VUMC 2PA8L 3I4NC 3HOVK 4C3HK 5FLMC 3S1QC 4A3BK 5IP7K 3K7AK 3HOYC 3S2HK 4LLGA 4YFXA 5IP9C 2BE5A 2JA7C 3H0GC 3S1MK 1IW7A 2E2HC 4A93K 3GTJC 5C4JC 2JA8C 1YNNA 5C4XK 3S2DC 3S1QK 2E2IK 4BY1C 2R7ZC 4LK0A 2A68A 4A3GC 1Y1WC 5IYCK 3GTPC 5IYDK 2PA8D 2B63K 4OIQA 4BXXK 3S16K 4QJVB 4A3EC 4A3LK 4XSXA 5M3FK 2JA6K 1TWFC 2PPBA 2O5JA 4A3MK 4A3DC 4A3CK 2E2JC 2A6HA 1WCMK 4A3FK 5C3EK 5M5XK 4X6AC 1YNJA 4YFKA 4ZH4A 1I3QK 1Y1VK 3M4OC 3HKZL 4C2MK 5C44C 3GTMK 4A3IK 2JA5K 3S1RK 1TWGC 1K83K 4OIRA 4BBRK 2NVXK 4KN7A 4Y52C 3PO3C 4YG2A 5M3MK 1XPPA 2YU9K 4C3JK 3PO2C 4LK1A 4Y7NC 4BY7C 3HOWC 4QIWL 2NVTK 2A69A 3GTGC 2VUMK 3S16C 3HOUC 3I4NK 5IYBC 4JK1A 4MEYA 3GTLC 2Y0SL 3HKZD 3HOXC 5FJ8K 3CQZK 3DXJA 3HOZC 1TWCK 3S1NC 2WB1L 3GTMC 4G7HA 2E2HK 4C3IK 3GTJK 5C4JK 2JA8K 3M3YC 4OIOA 4NOIA 4A3KC 2NVQC 4BY1K 3GTOK 2R7ZK 3S2DK 4BBSC 1TWAK 4QIWD 3GTQC 3GTKC 4A3GK 1Y1WK 2PMZL 4OINA 4A93C 2R93C 3S17K 3H3VL 4AYBL 3RZOC 5M5YK 1TWFK 1TWHC 5IYDC 4KMUA 4A3JK 4A3DK 1R9TC 2WB1D 2B63C 5M5WK 4QJVA 4BXXC 3I4MC 2A6EA 4G7OA 1I50C 4XLNA 4A3LC 4X6AK 1I6HC 2R92K 3M4OK 5C44K 2NVYC 4Q4ZA 1TWGK 4G7ZA 3S14C 5TMCA 1SFOC 3S15C 4Y52K 4KN4A 4A3FC 3PO3K 5C3EC 5FLMK 3RZDC 2O5IA 4C2MC 4XLPA 4AYBD
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3HOY K;  4Y7N K;  3FKI C;  3S1R C;  5IP9 K;  1K83 C;  2JA7 K;  3H0G K;  3GTG K;  1SMY A;  4C3H C;  4XSZ A;  3HOV C;  4Q5S A;  2YU9 C;  1BDF A;  4A3B C;  5IP7 C;  3K7A C;  3S2H C;  4YFN A;  2WAQ L;  3HOX K;  2NVT C;  3HOZ K;  3S1M C;  3GTP K;  5C4X C;  5D4D A;  3S1N K;  2Y0S D;  2E2I C;  3M3Y K;  4A3E K;  4A3K K;  2NVQ K;  1ZYR A;  3WOD A;  4BBS K;  3CQZ C;  2CW0 A;  5IYC C;  3GTQ K;  3GTK K;  1TWC C;  2E2J K;  2R93 K;  4C3I C;  2WAQ D;  3GTO C;  2JA6 C;  3RZO K;  1TWA C;  4GZY A;  5TMF A;  4OIP A;  4A3M C;  3H3V D;  4A3C C;  1TWH K;  2PMZ D;  3S17 C;  1R9T K;  1WCM C;  1I3Q C;  3I4M K;  3PO2 K;  1I50 K;  4MEX A;  4BY7 K;  3HOW K;  4A3I C;  1HQM A;  1I6H K;  3EQL A;  2JA5 C;  4BBR C;  4A3J C;  2NVX C;  2NVY K;  4MQ9 A;  1Y1V C;  1SFO K;  3S14 K;  3S15 K;  4C3J C;  5IYB K;  3GTL K;  3RZD K;  3HOU K;  2R92 C;  3FKI K;  1I6V A;  4LJZ A;  2VUM C;  2PA8 L;  3I4N C;  3HOV K;  4C3H K;  5FLM C;  3S1Q C;  4A3B K;  5IP7 K;  3K7A K;  3HOY C;  3S2H K;  4LLG A;  4YFX A;  5IP9 C;  2BE5 A;  2JA7 C;  3H0G C;  3S1M K;  1IW7 A;  2E2H C;  4A93 K;  3GTJ C;  5C4J C;  2JA8 C;  1YNN A;  5C4X K;  3S2D C;  3S1Q K;  2E2I K;  4BY1 C;  2R7Z C;  4LK0 A;  2A68 A;  4A3G C;  1Y1W C;  5IYC K;  3GTP C;  5IYD K;  2PA8 D;  2B63 K;  4OIQ A;  4BXX K;  3S16 K;  4QJV B;  4A3E C;  4A3L K;  4XSX A;  5M3F K;  2JA6 K;  1TWF C;  2PPB A;  2O5J A;  4A3M K;  4A3D C;  4A3C K;  2E2J C;  2A6H A;  1WCM K;  4A3F K;  5C3E K;  5M5X K;  4X6A C;  1YNJ A;  4YFK A;  4ZH4 A;  1I3Q K;  1Y1V K;  3M4O C;  3HKZ L;  4C2M K;  5C44 C;  3GTM K;  4A3I K;  2JA5 K;  3S1R K;  1TWG C;  1K83 K;  4OIR A;  4BBR K;  2NVX K;  4KN7 A;  4Y52 C;  3PO3 C;  4YG2 A;  5M3M K;  1XPP A;  2YU9 K;  4C3J K;  3PO2 C;  4LK1 A;  4Y7N C;  4BY7 C;  3HOW C;  4QIW L;  2NVT K;  2A69 A;  3GTG C;  2VUM K;  3S16 C;  3HOU C;  3I4N K;  5IYB C;  4JK1 A;  4MEY A;  3GTL C;  2Y0S L;  3HKZ D;  3HOX C;  5FJ8 K;  3CQZ K;  3DXJ A;  3HOZ C;  1TWC K;  3S1N C;  2WB1 L;  3GTM C;  4G7H A;  2E2H K;  4C3I K;  3GTJ K;  5C4J K;  2JA8 K;  3M3Y C;  4OIO A;  4NOI A;  4A3K C;  2NVQ C;  4BY1 K;  3GTO K;  2R7Z K;  3S2D K;  4BBS C;  1TWA K;  4QIW D;  3GTQ C;  3GTK C;  4A3G K;  1Y1W K;  2PMZ L;  4OIN A;  4A93 C;  2R93 C;  3S17 K;  3H3V L;  4AYB L;  3RZO C;  5M5Y K;  1TWF K;  1TWH C;  5IYD C;  4KMU A;  4A3J K;  4A3D K;  1R9T C;  2WB1 D;  2B63 C;  5M5W K;  4QJV A;  4BXX C;  3I4M C;  2A6E A;  4G7O A;  1I50 C;  4XLN A;  4A3L C;  4X6A K;  1I6H C;  2R92 K;  3M4O K;  5C44 K;  2NVY C;  4Q4Z A;  1TWG K;  4G7Z A;  3S14 C;  5TMC A;  1SFO C;  3S15 C;  4Y52 K;  4KN4 A;  4A3F C;  3PO3 K;  5C3E C;  5FLM K;  3RZD C;  2O5I A;  4C2M C;  4XLP A;  4AYB D; 
#chains in the Genus database with same CATH topology
 3S1R C;  1WIH A;  1YX2 A;  1WQF A;  1SMY A;  4Q5S A;  3Q3Q A;  2YU9 C;  2ZJP S;  3AH5 A;  4YFN A;  5IOQ A;  2ZJR S;  5L46 A;  1ZBS A;  4G0U A;  5D4D A;  1WQG A;  2Y0S D;  1TWC A;  3M3Y K;  3GTO A;  1X31 C;  3GTQ K;  4GT9 A;  3MML B;  2R93 K;  1Y1W A;  2JA6 C;  3RZO K;  1EK8 A;  5TMF A;  4OIP A;  1WOP A;  4GTL A;  2P5M A;  1USM A;  3PO2 K;  1I50 K;  3G4C A;  4BY7 K;  4IO9 S;  4BBR C;  1SFO K;  3DLL S;  3RZD K;  1O2F B;  2R92 C;  1L0W A;  3GTG A;  3S1Q C;  4LOW A;  4KMD A;  4YFX A;  2BE5 A;  4A93 K;  5C4X K;  2E2I K;  4BY1 C;  2GAG C;  3N0B A;  2A68 A;  4WFN S;  1JOE A;  2B63 K;  3BP8 C;  1USO A;  4QJV B;  3N0C A;  2RGR A;  2GSO A;  1TWF C;  5DM7 S;  1XXB A;  4A3F K;  1I3Q K;  3HKZ L;  4YFK A;  3GTM K;  3LYW A;  3VA7 A;  4A3I K;  3GEH A;  2FQT A;  2JA5 K;  1TWG C;  4OIR A;  4KN7 A;  2ZUF A;  5M3M K;  1XPP A;  4C3J K;  3PO2 C;  4LK1 A;  4BY7 C;  1BJT A;  2XCO A;  2W7V A;  3AD7 C;  4JK1 A;  4MEY A;  2Y0S L;  2Y3P A;  5FJ8 K;  4KAW X;  2FQO A;  1TWC K;  4DDQ A;  4C3I K;  5C4J K;  3GTO K;  2NVQ C;  3ADA C;  3GSI A;  4P9S A;  4J3N A;  2GSU A;  1Y1W K;  2JH3 A;  4OIN A;  4A93 C;  4BKW A;  3AQO A;  1B4A A;  5M5Y K;  1KQ4 A;  1PJ7 A;  4A3D K;  1R9T C;  2B63 C;  3A8I A;  1IBA A;  3I4M C;  4KM9 A;  3TFH A;  4XLN A;  5C44 K;  1ZXO A;  4G7Z A;  3S15 C;  4Y52 K;  4KN4 A;  4A3F C;  1K83 A;  1JQW A;  3PO3 K;  4GTA A;  3H3V D;  4XLP A;  3GTM C;  3HOY K;  3FKI C;  1O26 A;  2L5N A;  3GTG K;  3HOV C;  4C3H C;  1BDF A;  3ERE D;  3HOX K;  1GE9 A;  2V6U A;  3HOZ K;  5DM6 S;  3CQZ A;  3S1N K;  1J6W A;  4WIL A;  4A3E K;  1ZYR A;  1UV7 A;  3WOD A;  1VJE A;  4BBS K;  2CW0 A;  1IS1 A;  1TWC C;  2E2J K;  4C3I C;  4GTD A;  2WAQ D;  3GTO C;  1XZQ A;  4A3M C;  4AH6 A;  2XCR B;  4A3C C;  3LAP A;  1WCM C;  2EBB A;  1WOO A;  1PJ6 A;  2NVX C;  4KMA A;  1IL2 A;  3S14 K;  5EGE A;  5IYB K;  1O2A A;  3HOU K;  1O29 A;  3SZY A;  3GEE A;  4LJZ A;  3N3Y A;  2VUM C;  3I4N C;  3H0G A;  5IOT A;  4A3B K;  5IP7 K;  3K7A K;  3HOY C;  3S2H K;  2D6F C;  2V6T A;  2E2H C;  3S1M K;  3GTJ C;  3T01 A;  1YNN A;  3GTP A;  2R7Z C;  4C45 A;  4A3G C;  5IYC K;  2PA8 D;  3GTK A;  4OIQ A;  2KQ1 A;  4A3E C;  4A3L K;  1F7V A;  1EI6 A;  2E2J C;  1DD5 A;  2A6H A;  1TWH A;  4KC6 A;  4X6A C;  3M4O C;  5JVO A;  2ZUE A;  1K83 K;  2CFA A;  2NVY A;  4WJ4 A;  3TFI A;  4QIW L;  2NVT K;  2A69 A;  4G0W A;  4BLA A;  5IYB C;  3BUE A;  3CQZ K;  3GIR A;  1VRQ C;  2WB1 L;  3SZZ A;  1IE0 A;  2JA8 K;  3M3Y C;  3S2D K;  1XZQ B;  4P5A A;  3GTQ C;  4FZB A;  2R93 C;  2PHC B;  3S17 K;  1INN A;  2ZFZ A;  3TFJ A;  3TTG A;  3RZO C;  1VH2 A;  4PAA A;  3BP3 A;  2JA6 A;  1FEU A;  1J6V A;  1WQH A;  4G7O A;  1I50 C;  4A3L C;  1WOS A;  1Y1V A;  5E68 A;  5TMC A;  1SFO C;  3T00 A;  5FLM K;  1ISE A;  3RZD C;  5EGH A;  4AYB D;  4WJ3 M;  4Y7N K;  1JVI A;  1AB4 A;  2RH6 A;  1K83 C;  3H0G K;  3S16 K;  4XSZ A;  4GTC A;  4M1X A;  2NVT C;  3GDZ A;  4KB2 A;  3GTP K;  5C4X C;  1G51 A;  2E2I C;  4A3K K;  3LAJ A;  1PJ5 A;  3CQZ C;  2KPU A;  3GTK K;  1TWA A;  1ZQ1 C;  4BLB A;  3GEI A;  1O27 A;  1VLO A;  1EFW A;  1TWH K;  1TWF A;  2PMZ D;  3S17 C;  2CFA B;  4XCH A;  1I3Q C;  3HOW K;  4A3I C;  1I6H K;  2JA5 C;  3OPF A;  2NVY K;  4MQ9 A;  1TWG A;  4C3J C;  3NUH A;  1I6V A;  3AQP A;  2JA7 A;  5FLM C;  5IOS A;  4GTB A;  1VGX A;  3H0G C;  1IW7 A;  5C4J C;  4G0V A;  1J6X A;  5CJ9 A;  2P8T A;  3L4K A;  4LK0 A;  1YCL A;  3ORE A;  1Y1W C;  3GTP C;  4XSX A;  2JA6 K;  3FHZ A;  4A3D C;  3OEP A;  3QX3 A;  5HQH A;  4GFQ A;  5C3E K;  1R9T A;  1YNJ A;  1Y1V K;  5C44 C;  4RMF A;  1EH1 A;  5HL7 S;  4BBR K;  4Y52 C;  3PO3 C;  4YG2 A;  1O2B A;  4FM9 A;  3GTL A;  3HOW C;  3GTM A;  3FKI A;  4WFB S;  3GTG C;  3HKZ D;  3HOX C;  3G4A A;  3PIO S;  3HOZ C;  2V6S A;  3S1N C;  4G7H A;  5JFE A;  4NOI A;  4BY1 K;  4LR2 A;  4BBS C;  1TWA K;  2PMZ L;  3H3V L;  5CHP A;  1TWF K;  1BGW A;  4A3J K;  3T02 A;  5M5W K;  1DCH A;  1WCM A;  3IPJ A;  1V5V A;  4O2D A;  5JVG S;  1TWG K;  3S14 C;  4IOA S;  5C3E C;  2NVX A;  2O5I A;  1Y1V C;  3HOU C;  2YU9 A;  4GTF A;  1BS2 A;  5IP9 K;  1WSV A;  2JA7 K;  1O25 A;  2WAQ L;  4GTE A;  4A3B C;  4KAT A;  5IP7 C;  3K7A C;  3S2H C;  2VUM A;  1WOR A;  2KWA A;  4ILD A;  3S1M C;  1DCP A;  1XXC A;  1O24 A;  2E2H A;  2GAH C;  3GTJ A;  2NVQ K;  3AD9 C;  5IYC C;  2R7Z A;  1XZP A;  4P5B A;  1TWA C;  4GZY A;  4IOC S;  1RU0 A;  1R9T K;  3FOE A;  3I4M K;  4WFA S;  4MEX A;  1HQM A;  3EQL A;  4A3J C;  2R92 A;  1O28 A;  3S15 K;  1EQR A;  5IOR A;  1WSR A;  3GTL K;  1ZVU A;  1DCO A;  3FKI K;  4KAS A;  2PA8 L;  3PIP S;  4WCE S;  3HOV K;  4C3H K;  3CAG A;  3V4G A;  4LLG A;  3S0X A;  5IP9 C;  2JA7 C;  1C0A A;  2JA8 C;  3JST A;  3S2D C;  4LQY A;  5TJ3 A;  1IQ0 A;  5IYD K;  3GTQ A;  4KAR A;  1F93 A;  4BXX K;  2R93 A;  3FOF A;  5M3F K;  2PPB A;  2O5J A;  4A3M K;  4A3C K;  3AD8 C;  3L4J A;  3CF5 S;  1WCM K;  5M5X K;  4C2M K;  4ZH4 A;  4PAB A;  1I50 A;  3S1R K;  4WF9 S;  2NVX K;  1F7U A;  2YU9 K;  1SFO A;  4Y7N C;  1XXA A;  2VUM K;  3S16 C;  3I4N K;  3GTL C;  5JVH S;  2XCQ A;  3DXJ A;  2E2H K;  3GTJ K;  1XZP B;  4OIO A;  4A3K C;  2R7Z K;  2E2I A;  4QIW D;  3GTK C;  1F9N A;  4A3G K;  2L3U A;  1B4B A;  3A8J A;  3HXA A;  2GSN A;  1J98 A;  4AYB L;  3LPX A;  2B63 A;  4KB4 A;  1TWH C;  5IYD C;  4KMU A;  4KMH A;  2WB1 D;  4KDD A;  4QJV A;  4BXX C;  2A6E A;  4X6A K;  1I6H C;  1I3Q A;  2R92 K;  1HI9 A;  3M4O K;  4U67 S;  2NVY C;  4Q4Z A;  2ZJQ S;  5HL8 A;  2JA5 A;  3A8K A;  2KXY A;  4KM8 A;  3S1Q K;  4C2M C; 
#chains in the Genus database with same CATH homology
 3HOY K;  4Y7N K;  3FKI C;  3S1R C;  5IP9 K;  1K83 C;  2JA7 K;  3H0G K;  3GTG K;  1SMY A;  4C3H C;  4XSZ A;  3HOV C;  4Q5S A;  2YU9 C;  1BDF A;  4A3B C;  5IP7 C;  3K7A C;  3S2H C;  4YFN A;  2WAQ L;  3HOX K;  2NVT C;  3HOZ K;  3S1M C;  3GTP K;  5C4X C;  5D4D A;  3S1N K;  2Y0S D;  2E2I C;  3M3Y K;  4A3E K;  4A3K K;  2NVQ K;  1ZYR A;  3WOD A;  4BBS K;  3CQZ C;  2CW0 A;  5IYC C;  3GTQ K;  3GTK K;  1TWC C;  2E2J K;  2R93 K;  4C3I C;  2WAQ D;  3GTO C;  2JA6 C;  3RZO K;  1TWA C;  4GZY A;  5TMF A;  4OIP A;  4A3M C;  3H3V D;  4A3C C;  1TWH K;  2PMZ D;  3S17 C;  1R9T K;  1WCM C;  1I3Q C;  3I4M K;  3PO2 K;  1I50 K;  4MEX A;  4BY7 K;  3HOW K;  4A3I C;  1HQM A;  1I6H K;  3EQL A;  2JA5 C;  4BBR C;  4A3J C;  2NVX C;  2NVY K;  4MQ9 A;  1Y1V C;  1SFO K;  3S14 K;  3S15 K;  4C3J C;  5IYB K;  3GTL K;  3RZD K;  3HOU K;  2R92 C;  3FKI K;  1I6V A;  4LJZ A;  2VUM C;  2PA8 L;  3I4N C;  3HOV K;  4C3H K;  5FLM C;  3S1Q C;  4A3B K;  5IP7 K;  3K7A K;  3HOY C;  3S2H K;  4LLG A;  4YFX A;  5IP9 C;  2BE5 A;  2JA7 C;  3H0G C;  3S1M K;  1IW7 A;  2E2H C;  4A93 K;  3GTJ C;  5C4J C;  2JA8 C;  1YNN A;  5C4X K;  3S2D C;  3S1Q K;  2E2I K;  4BY1 C;  2R7Z C;  4LK0 A;  2A68 A;  4A3G C;  1Y1W C;  5IYC K;  3GTP C;  5IYD K;  2PA8 D;  2B63 K;  4OIQ A;  4BXX K;  3S16 K;  4QJV B;  4A3E C;  4A3L K;  4XSX A;  5M3F K;  2JA6 K;  1TWF C;  2PPB A;  2O5J A;  4A3M K;  4A3D C;  4A3C K;  2E2J C;  2A6H A;  1WCM K;  4A3F K;  5C3E K;  5M5X K;  4X6A C;  1YNJ A;  4YFK A;  4ZH4 A;  1I3Q K;  1Y1V K;  3M4O C;  3HKZ L;  4C2M K;  5C44 C;  3GTM K;  4A3I K;  2JA5 K;  3S1R K;  1TWG C;  1K83 K;  4OIR A;  4BBR K;  2NVX K;  4KN7 A;  4Y52 C;  3PO3 C;  4YG2 A;  5M3M K;  1XPP A;  2YU9 K;  4C3J K;  3PO2 C;  4LK1 A;  4Y7N C;  4BY7 C;  3HOW C;  4QIW L;  2NVT K;  2A69 A;  3GTG C;  2VUM K;  3S16 C;  3HOU C;  3I4N K;  5IYB C;  4JK1 A;  4MEY A;  3GTL C;  2Y0S L;  3HKZ D;  3HOX C;  5FJ8 K;  3CQZ K;  3DXJ A;  3HOZ C;  1TWC K;  3S1N C;  2WB1 L;  3GTM C;  4G7H A;  2E2H K;  4C3I K;  3GTJ K;  5C4J K;  2JA8 K;  3M3Y C;  4OIO A;  4NOI A;  4A3K C;  2NVQ C;  4BY1 K;  3GTO K;  2R7Z K;  3S2D K;  4BBS C;  1TWA K;  4QIW D;  3GTQ C;  3GTK C;  4A3G K;  1Y1W K;  2PMZ L;  4OIN A;  4A93 C;  2R93 C;  3S17 K;  3H3V L;  4AYB L;  3RZO C;  5M5Y K;  1TWF K;  1TWH C;  5IYD C;  4KMU A;  4A3J K;  4A3D K;  1R9T C;  2WB1 D;  2B63 C;  5M5W K;  4QJV A;  4BXX C;  3I4M C;  2A6E A;  4G7O A;  1I50 C;  4XLN A;  4A3L C;  4X6A K;  1I6H C;  2R92 K;  3M4O K;  5C44 K;  2NVY C;  4Q4Z A;  1TWG K;  4G7Z A;  3S14 C;  5TMC A;  1SFO C;  3S15 C;  4Y52 K;  4KN4 A;  4A3F C;  3PO3 K;  5C3E C;  5FLM K;  3RZD C;  2O5I A;  4C2M C;  4XLP A;  4AYB D; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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