5C44C

Crystal structure of a transcribing rna polymerase ii complex reveals a complete transcription bubble
Total Genus 50
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
50
sequence length
265
structure length
265
Chain Sequence
EGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase/dna/rna
molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Crystal Structure of a Transcribing RNA Polymerase II Complex Reveals a Complete Transcription Bubble.
pubmed doi rcsb
source organism Saccharomyces cerevisiae (strain atcc 204508 / s288c)
total genus 50
structure length 265
sequence length 265
ec nomenclature
pdb deposition date 2015-06-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 5c44C02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 5c44C01
4JK1A 5TMCA 4MEXA 4YFNA 3PO3C 4A93K 3GTQK 4C2MC 3GTKC 3FKIC 5C44C 4BBSC 4LJZA 3M4OC 4A3DC 4Y7NK 3M3YK 2WB1L 4A3LK 3S2DK 5C4JC 5C3EK 2R93C 1TWCK 5IP9C 1I6HK 3GTMC 2JA5C 4X6AK 2CW0A 2NVTC 2E2HC 5IP7K 1TWHC 2E2IC 3I4MC 4OIRA 5M5XK 1TWFK 3HOZK 2VUMK 5C4XC 2PMZL 2R7ZC 3WODA 3S1RC 4G7OA 3HOXK 1IW7A 1I6VA 3GTPC 4A3KC 4A93C 2WAQL 4C2MK 3GTKK 4A3DK 5C44K 4BBSK 1TWCC 3HKZD 3GTGC 4X6AC 5IYCK 1K83C 3S1NK 5IP9K 1TWAK 3GTMK 4C3IK 4A3BK 4LLGA 3HOZC 2VUMC 2E2HK 2BE5A 3CQZK 5M5WK 2E2IK 3RZOC 1Y1WC 4LK1A 2R7ZK 5M3FK 2WAQD 1R9TK 4AYBD 4A3MK 3S1RK 3S1QK 3GTPK 4A3KK 4A3CC 1I3QC 5IYCC 3S1NC 3I4NK 1TWGC 1TWAC 3GTOC 4C3IC 4A3BC 5M5YK 1K83K 3GTGK 4A3JK 3CQZC 2A6EA 4C3HC 3H0GK 4QIWL 4A3EC 4A3GC 4OIPA 1Y1WK 1R9TC 4A3MC 3S1QC 3H3VL 3RZOK 3S15K 3H3VD 4G7ZA 2WB1D 4A3CK 3I4NC 1SFOC 4MEYA 1I3QK 4A3JC 4XLPA 1TWGK 3GTOK 4G7HA 4KN7A 3PO2C 5IYBC 4BXXK 2PPBA 4BY7K 3H0GC 4QIWD 3GTJC 2PMZD 3K7AC 2JA6C 4C3HK 1ZYRA 3HOUC 3S15C 3S1MC 2PA8L 4A3EK 4A3GK 3S2HK 1I50K 1XPPA 2A6HA 2A69A 2YU9C 4C3JK 3S16C 4OIOA 4KMUA 1SFOK 2NVXC 4GZYA 4QJVB 3S17K 4BXXC 4BY7C 3PO2K 2O5IA 4NOIA 5IYBK 2JA8C 1Y1VC 4A3FC 3GTJK 4YFXA 3K7AK 2JA6K 5D4DA 1I50C 3GTLK 3HOUK 3S1MK 3HOVK 3S14K 5FLMK 1YNJA 4OIQA 4BBRK 4C3JC 2E2JC 1SMYA 4A3IK 2YU9K 4Y52C 3S17C 4YFKA 4KN4A 3HOYK 3S16K 2NVXK 3HOWC 4QJVA 2B63K 3RZDC 2A68A 4ZH4A 3S2HC 4Q5SA 2NVYC 2JA8K 2R92K 3GTLC 1Y1VK 3HKZL 1YNNA 4A3FK 3HOVC 3S14C 2Y0SL 5FLMC 4BBRC 4XSXA 4BY1K 4A3IC 3HOXC 1WCMK 4MQ9A 3HOYC 2E2JK 2NVQK 4XLNA 4Y52K 2JA7K 3HOWK 4YG2A 4OINA 2O5JA 5M3MK 5IYDK 2B63C 3GTQC 4Y7NC 4AYBL 3DXJA 3M3YC 4A3LC 3PO3K 2R92C 3S2DC 1HQMA 4LK0A 3FKIK 5C3EC 3RZDK 3M4OK 2NVYK 2PA8D 1BDFA 1I6HC 3EQLA 5C4JK 2Y0SD 2R93K 5FJ8K 4BY1C 2JA5K 5IP7C 2NVTK 1WCMC 1TWFC 4XSZA 5TMFA 4Q4ZA 2NVQC 1TWHK 3I4MK 2JA7C 5IYDC 5C4XK
chains in the Genus database with same CATH superfamily
4MEXA 1EFWA 3PO3C 3GEIA 3H3VL 4C2MC 3GTKC 4A3LK 1I6HK 3TFHA 5IOQA 1VLOA 3A8JA 4PAAA 4OIRA 3N3YA 1IL2A 2GAHC 2R7ZC 4BLBA 3WODA 3S1RC 3GTKA 4A93C 2WAQL 3T00A 3AD7C 4C2MK 3GTKK 3HKZD 4IOCS 3ADAC 1O2FB 4KM9A 5IYCK 4C3IK 4A3BK 1YX2A 4LLGA 2R7ZA 3HOZC 1O26A 5M5WK 3RZOC 1O25A 2R7ZK 2WAQD 1JVIA 3FHZA 4A3MK 3S1RK 3G4AA 3TFJA 1IBAA 4KATA 1TWFA 4P5BA 1PJ7A 4C3HC 4A3GC 3RZOK 5HL8A 3S1QC 1AB4A 3A8IA 4AH6A 3LYWA 1XZQA 1VRQC 3GTMA 5CJ9A 4A3JC 4XLPA 3GIRA 5IYBC 2KXYA 1B4AA 2PMZD 4C3HK 4A3GK 3IPJA 1I50K 4LQYA 5IOSA 3NUHA 4OIOA 1V5VA 4GZYA 4M1XA 4BY7C 4G0UA 2ZJPS 2O5IA 5IYBK 5JVHS 2JA8C 1J6VA 1Y1VC 3S2HK 1DCOA 1F7VA 3G4CA 1BS2A 1VH2A 3VA7A 3S14K 3OREA 1JOEA 3AQOA 4A3IK 2GSOA 4QJVA 2B63K 2A68A 2NVYC 2JA8K 1Y1VK 4G0VA 2P5MA 1EQRA 4IOAS 3DLLS 3N0CA 1USOA 2RH6A 5TJ3A 3GDZA 3HOWK 2ZUFA 4YG2A 3PIPS 4BKWA 3GTQC 2NVYA 4AYBL 2JA6A 2R92C 3S2DC 3FKIK 2NVYK 1JQWA 3BP3A 1GE9A 3T01A 2YU9A 3SZZA 2JA5K 5IP7C 2NVTK 2NVQC 4Q4ZA 1J6WA 3T02A 5EGEA 5TMCA 2R92A 1ZBSA 3GTQK 4A3DC 4LJZA 3S2DK 2WB1L 5C4JC 3LAPA 5IP9C 1XXCA 2RGRA 1UV7A 4IO9S 2E2HC 5IP7K 1TWHC 2E2IC 1VJEA 3FOEA 4LR2A 1ISEA 3AD8C 4G7OA 1IW7A 3GTPC 2ZJQS 5CHPA 1ZQ1C 4A3DK 4GT9A 3S1NK 3OPFA 5IP9K 1TWAK 1TWHA 2E2HA 3CF5S 5JFEA 4GTBA 2E2HK 4WJ4A 2BE5A 3CQZK 2E2IK 1WOPA 4KAWX 4LK1A 5HL7S 1R9TK 3GTPK 1XZPA 4A3CC 2GSUA 3BUEA 1I3QC 5IYCC 1VGXA 3I4NK 1TWGC 1L0WA 4C3IC 4A3BC 1O2BA 1WOOA 3Q3QA 4KB2A 1C0AA 4P5AA 4A3MC 2D6FC 3JSTA 3L4KA 3H3VD 4KASA 1TWGA 4A3CK 1SFOC 1I3QK 1TWGK 1RU0A 1KQ4A 4KN7A 3S0XA 4BXXK 2PPBA 3GEHA 3GTJC 3K7AC 1SFOA 2XCOA 4C3JK 2L5NA 1O24A 1SFOK 1ZVUA 4NOIA 2JH3A 4A3FC 4KMHA 3GTJK 4YFXA 3K7AK 3GTLK 1I50C 3HOVK 5FLMK 4OIQA 1SMYA 4KN4A 1J6XA 3GEEA 1I50A 3S2HC 2CFAA 4KB4A 4A3FK 1WSRA 3S14C 2Y0SL 4XSXA 4A3IC 3HOXC 1WCMK 4MQ9A 3A8KA 2JA7K 1DD5A 2B63C 4Y7NC 3DXJA 3M3YC 5C3EC 1USMA 3M4OK 2Y0SD 2R93K 1F9NA 2Y3PA 5TMFA 3I4MK 3HOWC 3HOXK 2B63A 1WQHA 5C4XK 4JK1A 1Y1VA 4Y7NK 3FKIC 4BBSC 3M3YK 5C3EK 1TWCK 5L46A 2JA5C 4X6AK 2CW0A 2NVTC 3BP8C 5M5XK 2VUMK 3AH5A 4GTAA 1FEUA 3PIOS 3FKIA 1I6VA 3L4JA 1B4BA 4BBSK 5DM7S 2EBBA 2JA5A 3GTGC 1K83C 4GTFA 4XCHA 1Y1WC 3GTQA 2XCQA 5M3FK 4KMDA 4AYBD 1XZQB 5HQHA 1G51A 3GTGA 2GSNA 1K83A 3S1NC 1DCPA 3GTGK 1TWAC 3GTOC 3HXAA 1K83K 1INNA 4P9SA 1O28A 3CQZC 2V6SA 3H0GK 4QIWL 4GTDA 4GFQA 4OIPA 1Y1WK 1R9TC 3S15K 2WB1D 1TWAA 3GTOA 3I4NC 4MEYA 3CQZA 3GTOK 2E2IA 4WJ3M 4QIWD 1R9TA 5IOTA 3GTPA 2ZUEA 1ZYRA 3HOUC 3S1MC 2PA8L 1IQ0A 1XPPA 3N0BA 4PABA 4BLAA 3S16C 2NVXC 2ZJRS 4QJVB 3S17K 2FQTA 4BXXC 1ZXOA 1WOSA 1IE0A 3TTGA 5D4DA 3CAGA 3HOUK 5EGHA 3S1MK 1I3QA 1YNJA 1WSVA 1F7UA 4BBRK 2NVXA 4C3JC 4ILDA 4Y52C 3HOYK 4RMFA 3S16K 2KQ1A 2NVXK 4GTLA 3RZDC 4Q5SA 3GTLC 3HKZL 3HOVC 1F93A 5FLMC 4BY1K 2W7VA 1WORA 4KC6A 4GTCA 4XLNA 4Y52K 5IYDK 5M3MK 3OEPA 3GTJA 3GTLA 4FM9A 3PO3K 3RZDK 1HQMA 4LK0A 3EQLA 1HI9A 4O2DA 4WF9S 1WCMC 1TWFC 4XSZA 2JA7C 1J98A 3QX3A 4YFNA 4WFBS 4GTEA 4A93K 4KDDA 5C44C 3M4OC 3LPXA 2GAGC 2R93C 3GTMC 2ZFZA 4KM8A 1WCMA 3FOFA 1EH1A 1X31C 2JA7A 1EK8A 3AD9C 1EI6A 3I4MC 1TWFK 1O29A 3HOZK 5C4XC 2FQOA 2PMZL 1XXBA 1XZPB 2PHCB 4WFAS 4A3KC 2V6UA 4DDQA 4J3NA 2R93A 5C44K 1TWCC 3ERED 1WQGA 4X6AC 3GTMK 1BGWA 2VUMC 4KMAA 4G0WA 5DM6S 1XXAA 4KARA 3S1QK 1TWCA 4A3KK 4C45A 4U67S 5M5YK 2L3UA 4A3JK 2VUMA 2A6EA 1WQFA 4A3EC 5E68A 3TFIA 4G7ZA 3MMLB 4G7HA 2KPUA 3PO2C 4BY7K 3H0GC 2JA6C 1BJTA 3S15C 4A3EK 3LAJA 2A6HA 1PJ5A 2A69A 2P8TA 2YU9C 4KMUA 3H0GA 4WFNS 2CFAB 1Y1WA 3PO2K 4LOWA 2JA6K 2V6TA 4WILA 5JVGS 2E2JC 1IS1A 2YU9K 3S17C 4YFKA 1DCHA 1O2AA 4ZH4A 2R92K 1O27A 1YNNA 4FZBA 5IORA 1WIHA 4BBRC 1PJ6A 3V4GA 2NVQK 3HOYC 2E2JK 4OINA 2O5JA 4WCES 3SZYA 2XCRB 1YCLA 4A3LC 2PA8D 3AQPA 1BDFA 1I6HC 3GSIA 5C4JK 5JVOA 5FJ8K 4BY1C 2KWAA 1TWHK 5IYDC
chains in the Genus database with same CATH topology
4JK1A 5TMCA 4MEXA 4YFNA 3PO3C 4A93K 3GTQK 4C2MC 3GTKC 3FKIC 5C44C 4BBSC 4LJZA 3M4OC 4A3DC 4Y7NK 3M3YK 2WB1L 4A3LK 3S2DK 5C4JC 5C3EK 2R93C 1TWCK 5IP9C 1I6HK 3GTMC 2JA5C 4X6AK 2CW0A 2NVTC 2E2HC 5IP7K 1TWHC 2E2IC 3I4MC 4OIRA 5M5XK 1TWFK 3HOZK 2VUMK 5C4XC 2PMZL 2R7ZC 3WODA 3S1RC 4G7OA 3HOXK 1IW7A 1I6VA 3GTPC 4A3KC 4A93C 2WAQL 4C2MK 3GTKK 4A3DK 5C44K 4BBSK 1TWCC 3HKZD 3GTGC 4X6AC 5IYCK 1K83C 3S1NK 5IP9K 1TWAK 3GTMK 4C3IK 4A3BK 4LLGA 3HOZC 2VUMC 2E2HK 2BE5A 3CQZK 5M5WK 2E2IK 3RZOC 1Y1WC 4LK1A 2R7ZK 5M3FK 2WAQD 1R9TK 4AYBD 4A3MK 3S1RK 3S1QK 3GTPK 4A3KK 4A3CC 1I3QC 5IYCC 3S1NC 3I4NK 1TWGC 1TWAC 3GTOC 4C3IC 4A3BC 5M5YK 1K83K 3GTGK 4A3JK 3CQZC 2A6EA 4C3HC 3H0GK 4QIWL 4A3EC 4A3GC 4OIPA 1Y1WK 1R9TC 4A3MC 3S1QC 3H3VL 3RZOK 3S15K 3H3VD 4G7ZA 2WB1D 4A3CK 3I4NC 1SFOC 4MEYA 1I3QK 4A3JC 4XLPA 1TWGK 3GTOK 4G7HA 4KN7A 3PO2C 5IYBC 4BXXK 2PPBA 4BY7K 3H0GC 4QIWD 3GTJC 2PMZD 3K7AC 2JA6C 4C3HK 1ZYRA 3HOUC 3S15C 3S1MC 2PA8L 4A3EK 4A3GK 3S2HK 1I50K 1XPPA 2A6HA 2A69A 2YU9C 4C3JK 3S16C 4OIOA 4KMUA 1SFOK 2NVXC 4GZYA 4QJVB 3S17K 4BXXC 4BY7C 3PO2K 2O5IA 4NOIA 5IYBK 2JA8C 1Y1VC 4A3FC 3GTJK 4YFXA 3K7AK 2JA6K 5D4DA 1I50C 3GTLK 3HOUK 3S1MK 3HOVK 3S14K 5FLMK 1YNJA 4OIQA 4BBRK 4C3JC 2E2JC 1SMYA 4A3IK 2YU9K 4Y52C 3S17C 4YFKA 4KN4A 3HOYK 3S16K 2NVXK 3HOWC 4QJVA 2B63K 3RZDC 2A68A 4ZH4A 3S2HC 4Q5SA 2NVYC 2JA8K 2R92K 3GTLC 1Y1VK 3HKZL 1YNNA 4A3FK 3HOVC 3S14C 2Y0SL 5FLMC 4BBRC 4XSXA 4BY1K 4A3IC 3HOXC 1WCMK 4MQ9A 3HOYC 2E2JK 2NVQK 4XLNA 4Y52K 2JA7K 3HOWK 4YG2A 4OINA 2O5JA 5M3MK 5IYDK 2B63C 3GTQC 4Y7NC 4AYBL 3DXJA 3M3YC 4A3LC 3PO3K 2R92C 3S2DC 1HQMA 4LK0A 3FKIK 5C3EC 3RZDK 3M4OK 2NVYK 2PA8D 1BDFA 1I6HC 3EQLA 5C4JK 2Y0SD 2R93K 5FJ8K 4BY1C 2JA5K 5IP7C 2NVTK 1WCMC 1TWFC 4XSZA 5TMFA 4Q4ZA 2NVQC 1TWHK 3I4MK 2JA7C 5IYDC 5C4XK
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4JK1 A;  5TMC A;  4MEX A;  4YFN A;  3PO3 C;  4A93 K;  3GTQ K;  4C2M C;  3GTK C;  3FKI C;  5C44 C;  4BBS C;  4LJZ A;  3M4O C;  4A3D C;  4Y7N K;  3M3Y K;  2WB1 L;  4A3L K;  3S2D K;  5C4J C;  5C3E K;  2R93 C;  1TWC K;  5IP9 C;  1I6H K;  3GTM C;  2JA5 C;  4X6A K;  2CW0 A;  2NVT C;  2E2H C;  5IP7 K;  1TWH C;  2E2I C;  3I4M C;  4OIR A;  5M5X K;  1TWF K;  3HOZ K;  2VUM K;  5C4X C;  2PMZ L;  2R7Z C;  3WOD A;  3S1R C;  4G7O A;  3HOX K;  1IW7 A;  1I6V A;  3GTP C;  4A3K C;  4A93 C;  2WAQ L;  4C2M K;  3GTK K;  4A3D K;  5C44 K;  4BBS K;  1TWC C;  3HKZ D;  3GTG C;  4X6A C;  5IYC K;  1K83 C;  3S1N K;  5IP9 K;  1TWA K;  3GTM K;  4C3I K;  4A3B K;  4LLG A;  3HOZ C;  2VUM C;  2E2H K;  2BE5 A;  3CQZ K;  5M5W K;  2E2I K;  3RZO C;  1Y1W C;  4LK1 A;  2R7Z K;  5M3F K;  2WAQ D;  1R9T K;  4AYB D;  4A3M K;  3S1R K;  3S1Q K;  3GTP K;  4A3K K;  4A3C C;  1I3Q C;  5IYC C;  3S1N C;  3I4N K;  1TWG C;  1TWA C;  3GTO C;  4C3I C;  4A3B C;  5M5Y K;  1K83 K;  3GTG K;  4A3J K;  3CQZ C;  2A6E A;  4C3H C;  3H0G K;  4QIW L;  4A3E C;  4A3G C;  4OIP A;  1Y1W K;  1R9T C;  4A3M C;  3S1Q C;  3H3V L;  3RZO K;  3S15 K;  3H3V D;  4G7Z A;  2WB1 D;  4A3C K;  3I4N C;  1SFO C;  4MEY A;  1I3Q K;  4A3J C;  4XLP A;  1TWG K;  3GTO K;  4G7H A;  4KN7 A;  3PO2 C;  5IYB C;  4BXX K;  2PPB A;  4BY7 K;  3H0G C;  4QIW D;  3GTJ C;  2PMZ D;  3K7A C;  2JA6 C;  4C3H K;  1ZYR A;  3HOU C;  3S15 C;  3S1M C;  2PA8 L;  4A3E K;  4A3G K;  3S2H K;  1I50 K;  1XPP A;  2A6H A;  2A69 A;  2YU9 C;  4C3J K;  3S16 C;  4OIO A;  4KMU A;  1SFO K;  2NVX C;  4GZY A;  4QJV B;  3S17 K;  4BXX C;  4BY7 C;  3PO2 K;  2O5I A;  4NOI A;  5IYB K;  2JA8 C;  1Y1V C;  4A3F C;  3GTJ K;  4YFX A;  3K7A K;  2JA6 K;  5D4D A;  1I50 C;  3GTL K;  3HOU K;  3S1M K;  3HOV K;  3S14 K;  5FLM K;  1YNJ A;  4OIQ A;  4BBR K;  4C3J C;  2E2J C;  1SMY A;  4A3I K;  2YU9 K;  4Y52 C;  3S17 C;  4YFK A;  4KN4 A;  3HOY K;  3S16 K;  2NVX K;  3HOW C;  4QJV A;  2B63 K;  3RZD C;  2A68 A;  4ZH4 A;  3S2H C;  4Q5S A;  2NVY C;  2JA8 K;  2R92 K;  3GTL C;  1Y1V K;  3HKZ L;  1YNN A;  4A3F K;  3HOV C;  3S14 C;  2Y0S L;  5FLM C;  4BBR C;  4XSX A;  4BY1 K;  4A3I C;  3HOX C;  1WCM K;  4MQ9 A;  3HOY C;  2E2J K;  2NVQ K;  4XLN A;  4Y52 K;  2JA7 K;  3HOW K;  4YG2 A;  4OIN A;  2O5J A;  5M3M K;  5IYD K;  2B63 C;  3GTQ C;  4Y7N C;  4AYB L;  3DXJ A;  3M3Y C;  4A3L C;  3PO3 K;  2R92 C;  3S2D C;  1HQM A;  4LK0 A;  3FKI K;  5C3E C;  3RZD K;  3M4O K;  2NVY K;  2PA8 D;  1BDF A;  1I6H C;  3EQL A;  5C4J K;  2Y0S D;  2R93 K;  5FJ8 K;  4BY1 C;  2JA5 K;  5IP7 C;  2NVT K;  1WCM C;  1TWF C;  4XSZ A;  5TMF A;  4Q4Z A;  2NVQ C;  1TWH K;  3I4M K;  2JA7 C;  5IYD C;  5C4X K; 
#chains in the Genus database with same CATH topology
 4MEX A;  1EFW A;  3PO3 C;  3GEI A;  3H3V L;  4C2M C;  3GTK C;  4A3L K;  1I6H K;  3TFH A;  5IOQ A;  1VLO A;  3A8J A;  4PAA A;  4OIR A;  3N3Y A;  1IL2 A;  2GAH C;  2R7Z C;  4BLB A;  3WOD A;  3S1R C;  3GTK A;  4A93 C;  2WAQ L;  3T00 A;  3AD7 C;  4C2M K;  3GTK K;  3HKZ D;  4IOC S;  3ADA C;  1O2F B;  4KM9 A;  5IYC K;  4C3I K;  4A3B K;  1YX2 A;  4LLG A;  2R7Z A;  3HOZ C;  1O26 A;  5M5W K;  3RZO C;  1O25 A;  2R7Z K;  2WAQ D;  1JVI A;  3FHZ A;  4A3M K;  3S1R K;  3G4A A;  3TFJ A;  1IBA A;  4KAT A;  1TWF A;  4P5B A;  1PJ7 A;  4C3H C;  4A3G C;  3RZO K;  5HL8 A;  3S1Q C;  1AB4 A;  3A8I A;  4AH6 A;  3LYW A;  1XZQ A;  1VRQ C;  3GTM A;  5CJ9 A;  4A3J C;  4XLP A;  3GIR A;  5IYB C;  2KXY A;  1B4A A;  2PMZ D;  4C3H K;  4A3G K;  3IPJ A;  1I50 K;  4LQY A;  5IOS A;  3NUH A;  4OIO A;  1V5V A;  4GZY A;  4M1X A;  4BY7 C;  4G0U A;  2ZJP S;  2O5I A;  5IYB K;  5JVH S;  2JA8 C;  1J6V A;  1Y1V C;  3S2H K;  1DCO A;  1F7V A;  3G4C A;  1BS2 A;  1VH2 A;  3VA7 A;  3S14 K;  3ORE A;  1JOE A;  3AQO A;  4A3I K;  2GSO A;  4QJV A;  2B63 K;  2A68 A;  2NVY C;  2JA8 K;  1Y1V K;  4G0V A;  2P5M A;  1EQR A;  4IOA S;  3DLL S;  3N0C A;  1USO A;  2RH6 A;  5TJ3 A;  3GDZ A;  3HOW K;  2ZUF A;  4YG2 A;  3PIP S;  4BKW A;  3GTQ C;  2NVY A;  4AYB L;  2JA6 A;  2R92 C;  3S2D C;  3FKI K;  2NVY K;  1JQW A;  3BP3 A;  1GE9 A;  3T01 A;  2YU9 A;  3SZZ A;  2JA5 K;  5IP7 C;  2NVT K;  2NVQ C;  4Q4Z A;  1J6W A;  3T02 A;  5EGE A;  5TMC A;  2R92 A;  1ZBS A;  3GTQ K;  4A3D C;  4LJZ A;  3S2D K;  2WB1 L;  5C4J C;  3LAP A;  5IP9 C;  1XXC A;  2RGR A;  1UV7 A;  4IO9 S;  2E2H C;  5IP7 K;  1TWH C;  2E2I C;  1VJE A;  3FOE A;  4LR2 A;  1ISE A;  3AD8 C;  4G7O A;  1IW7 A;  3GTP C;  2ZJQ S;  5CHP A;  1ZQ1 C;  4A3D K;  4GT9 A;  3S1N K;  3OPF A;  5IP9 K;  1TWA K;  1TWH A;  2E2H A;  3CF5 S;  5JFE A;  4GTB A;  2E2H K;  4WJ4 A;  2BE5 A;  3CQZ K;  2E2I K;  1WOP A;  4KAW X;  4LK1 A;  5HL7 S;  1R9T K;  3GTP K;  1XZP A;  4A3C C;  2GSU A;  3BUE A;  1I3Q C;  5IYC C;  1VGX A;  3I4N K;  1TWG C;  1L0W A;  4C3I C;  4A3B C;  1O2B A;  1WOO A;  3Q3Q A;  4KB2 A;  1C0A A;  4P5A A;  4A3M C;  2D6F C;  3JST A;  3L4K A;  3H3V D;  4KAS A;  1TWG A;  4A3C K;  1SFO C;  1I3Q K;  1TWG K;  1RU0 A;  1KQ4 A;  4KN7 A;  3S0X A;  4BXX K;  2PPB A;  3GEH A;  3GTJ C;  3K7A C;  1SFO A;  2XCO A;  4C3J K;  2L5N A;  1O24 A;  1SFO K;  1ZVU A;  4NOI A;  2JH3 A;  4A3F C;  4KMH A;  3GTJ K;  4YFX A;  3K7A K;  3GTL K;  1I50 C;  3HOV K;  5FLM K;  4OIQ A;  1SMY A;  4KN4 A;  1J6X A;  3GEE A;  1I50 A;  3S2H C;  2CFA A;  4KB4 A;  4A3F K;  1WSR A;  3S14 C;  2Y0S L;  4XSX A;  4A3I C;  3HOX C;  1WCM K;  4MQ9 A;  3A8K A;  2JA7 K;  1DD5 A;  2B63 C;  4Y7N C;  3DXJ A;  3M3Y C;  5C3E C;  1USM A;  3M4O K;  2Y0S D;  2R93 K;  1F9N A;  2Y3P A;  5TMF A;  3I4M K;  3HOW C;  3HOX K;  2B63 A;  1WQH A;  5C4X K;  4JK1 A;  1Y1V A;  4Y7N K;  3FKI C;  4BBS C;  3M3Y K;  5C3E K;  1TWC K;  5L46 A;  2JA5 C;  4X6A K;  2CW0 A;  2NVT C;  3BP8 C;  5M5X K;  2VUM K;  3AH5 A;  4GTA A;  1FEU A;  3PIO S;  3FKI A;  1I6V A;  3L4J A;  1B4B A;  4BBS K;  5DM7 S;  2EBB A;  2JA5 A;  3GTG C;  1K83 C;  4GTF A;  4XCH A;  1Y1W C;  3GTQ A;  2XCQ A;  5M3F K;  4KMD A;  4AYB D;  1XZQ B;  5HQH A;  1G51 A;  3GTG A;  2GSN A;  1K83 A;  3S1N C;  1DCP A;  3GTG K;  1TWA C;  3GTO C;  3HXA A;  1K83 K;  1INN A;  4P9S A;  1O28 A;  3CQZ C;  2V6S A;  3H0G K;  4QIW L;  4GTD A;  4GFQ A;  4OIP A;  1Y1W K;  1R9T C;  3S15 K;  2WB1 D;  1TWA A;  3GTO A;  3I4N C;  4MEY A;  3CQZ A;  3GTO K;  2E2I A;  4WJ3 M;  4QIW D;  1R9T A;  5IOT A;  3GTP A;  2ZUE A;  1ZYR A;  3HOU C;  3S1M C;  2PA8 L;  1IQ0 A;  1XPP A;  3N0B A;  4PAB A;  4BLA A;  3S16 C;  2NVX C;  2ZJR S;  4QJV B;  3S17 K;  2FQT A;  4BXX C;  1ZXO A;  1WOS A;  1IE0 A;  3TTG A;  5D4D A;  3CAG A;  3HOU K;  5EGH A;  3S1M K;  1I3Q A;  1YNJ A;  1WSV A;  1F7U A;  4BBR K;  2NVX A;  4C3J C;  4ILD A;  4Y52 C;  3HOY K;  4RMF A;  3S16 K;  2KQ1 A;  2NVX K;  4GTL A;  3RZD C;  4Q5S A;  3GTL C;  3HKZ L;  3HOV C;  1F93 A;  5FLM C;  4BY1 K;  2W7V A;  1WOR A;  4KC6 A;  4GTC A;  4XLN A;  4Y52 K;  5IYD K;  5M3M K;  3OEP A;  3GTJ A;  3GTL A;  4FM9 A;  3PO3 K;  3RZD K;  1HQM A;  4LK0 A;  3EQL A;  1HI9 A;  4O2D A;  4WF9 S;  1WCM C;  1TWF C;  4XSZ A;  2JA7 C;  1J98 A;  3QX3 A;  4YFN A;  4WFB S;  4GTE A;  4A93 K;  4KDD A;  5C44 C;  3M4O C;  3LPX A;  2GAG C;  2R93 C;  3GTM C;  2ZFZ A;  4KM8 A;  1WCM A;  3FOF A;  1EH1 A;  1X31 C;  2JA7 A;  1EK8 A;  3AD9 C;  1EI6 A;  3I4M C;  1TWF K;  1O29 A;  3HOZ K;  5C4X C;  2FQO A;  2PMZ L;  1XXB A;  1XZP B;  2PHC B;  4WFA S;  4A3K C;  2V6U A;  4DDQ A;  4J3N A;  2R93 A;  5C44 K;  1TWC C;  3ERE D;  1WQG A;  4X6A C;  3GTM K;  1BGW A;  2VUM C;  4KMA A;  4G0W A;  5DM6 S;  1XXA A;  4KAR A;  3S1Q K;  1TWC A;  4A3K K;  4C45 A;  4U67 S;  5M5Y K;  2L3U A;  4A3J K;  2VUM A;  2A6E A;  1WQF A;  4A3E C;  5E68 A;  3TFI A;  4G7Z A;  3MML B;  4G7H A;  2KPU A;  3PO2 C;  4BY7 K;  3H0G C;  2JA6 C;  1BJT A;  3S15 C;  4A3E K;  3LAJ A;  2A6H A;  1PJ5 A;  2A69 A;  2P8T A;  2YU9 C;  4KMU A;  3H0G A;  4WFN S;  2CFA B;  1Y1W A;  3PO2 K;  4LOW A;  2JA6 K;  2V6T A;  4WIL A;  5JVG S;  2E2J C;  1IS1 A;  2YU9 K;  3S17 C;  4YFK A;  1DCH A;  1O2A A;  4ZH4 A;  2R92 K;  1O27 A;  1YNN A;  4FZB A;  5IOR A;  1WIH A;  4BBR C;  1PJ6 A;  3V4G A;  2NVQ K;  3HOY C;  2E2J K;  4OIN A;  2O5J A;  4WCE S;  3SZY A;  2XCR B;  1YCL A;  4A3L C;  2PA8 D;  3AQP A;  1BDF A;  1I6H C;  3GSI A;  5C4J K;  5JVO A;  5FJ8 K;  4BY1 C;  2KWA A;  1TWH K;  5IYD C; 
#chains in the Genus database with same CATH homology
 4JK1 A;  5TMC A;  4MEX A;  4YFN A;  3PO3 C;  4A93 K;  3GTQ K;  4C2M C;  3GTK C;  3FKI C;  5C44 C;  4BBS C;  4LJZ A;  3M4O C;  4A3D C;  4Y7N K;  3M3Y K;  2WB1 L;  4A3L K;  3S2D K;  5C4J C;  5C3E K;  2R93 C;  1TWC K;  5IP9 C;  1I6H K;  3GTM C;  2JA5 C;  4X6A K;  2CW0 A;  2NVT C;  2E2H C;  5IP7 K;  1TWH C;  2E2I C;  3I4M C;  4OIR A;  5M5X K;  1TWF K;  3HOZ K;  2VUM K;  5C4X C;  2PMZ L;  2R7Z C;  3WOD A;  3S1R C;  4G7O A;  3HOX K;  1IW7 A;  1I6V A;  3GTP C;  4A3K C;  4A93 C;  2WAQ L;  4C2M K;  3GTK K;  4A3D K;  5C44 K;  4BBS K;  1TWC C;  3HKZ D;  3GTG C;  4X6A C;  5IYC K;  1K83 C;  3S1N K;  5IP9 K;  1TWA K;  3GTM K;  4C3I K;  4A3B K;  4LLG A;  3HOZ C;  2VUM C;  2E2H K;  2BE5 A;  3CQZ K;  5M5W K;  2E2I K;  3RZO C;  1Y1W C;  4LK1 A;  2R7Z K;  5M3F K;  2WAQ D;  1R9T K;  4AYB D;  4A3M K;  3S1R K;  3S1Q K;  3GTP K;  4A3K K;  4A3C C;  1I3Q C;  5IYC C;  3S1N C;  3I4N K;  1TWG C;  1TWA C;  3GTO C;  4C3I C;  4A3B C;  5M5Y K;  1K83 K;  3GTG K;  4A3J K;  3CQZ C;  2A6E A;  4C3H C;  3H0G K;  4QIW L;  4A3E C;  4A3G C;  4OIP A;  1Y1W K;  1R9T C;  4A3M C;  3S1Q C;  3H3V L;  3RZO K;  3S15 K;  3H3V D;  4G7Z A;  2WB1 D;  4A3C K;  3I4N C;  1SFO C;  4MEY A;  1I3Q K;  4A3J C;  4XLP A;  1TWG K;  3GTO K;  4G7H A;  4KN7 A;  3PO2 C;  5IYB C;  4BXX K;  2PPB A;  4BY7 K;  3H0G C;  4QIW D;  3GTJ C;  2PMZ D;  3K7A C;  2JA6 C;  4C3H K;  1ZYR A;  3HOU C;  3S15 C;  3S1M C;  2PA8 L;  4A3E K;  4A3G K;  3S2H K;  1I50 K;  1XPP A;  2A6H A;  2A69 A;  2YU9 C;  4C3J K;  3S16 C;  4OIO A;  4KMU A;  1SFO K;  2NVX C;  4GZY A;  4QJV B;  3S17 K;  4BXX C;  4BY7 C;  3PO2 K;  2O5I A;  4NOI A;  5IYB K;  2JA8 C;  1Y1V C;  4A3F C;  3GTJ K;  4YFX A;  3K7A K;  2JA6 K;  5D4D A;  1I50 C;  3GTL K;  3HOU K;  3S1M K;  3HOV K;  3S14 K;  5FLM K;  1YNJ A;  4OIQ A;  4BBR K;  4C3J C;  2E2J C;  1SMY A;  4A3I K;  2YU9 K;  4Y52 C;  3S17 C;  4YFK A;  4KN4 A;  3HOY K;  3S16 K;  2NVX K;  3HOW C;  4QJV A;  2B63 K;  3RZD C;  2A68 A;  4ZH4 A;  3S2H C;  4Q5S A;  2NVY C;  2JA8 K;  2R92 K;  3GTL C;  1Y1V K;  3HKZ L;  1YNN A;  4A3F K;  3HOV C;  3S14 C;  2Y0S L;  5FLM C;  4BBR C;  4XSX A;  4BY1 K;  4A3I C;  3HOX C;  1WCM K;  4MQ9 A;  3HOY C;  2E2J K;  2NVQ K;  4XLN A;  4Y52 K;  2JA7 K;  3HOW K;  4YG2 A;  4OIN A;  2O5J A;  5M3M K;  5IYD K;  2B63 C;  3GTQ C;  4Y7N C;  4AYB L;  3DXJ A;  3M3Y C;  4A3L C;  3PO3 K;  2R92 C;  3S2D C;  1HQM A;  4LK0 A;  3FKI K;  5C3E C;  3RZD K;  3M4O K;  2NVY K;  2PA8 D;  1BDF A;  1I6H C;  3EQL A;  5C4J K;  2Y0S D;  2R93 K;  5FJ8 K;  4BY1 C;  2JA5 K;  5IP7 C;  2NVT K;  1WCM C;  1TWF C;  4XSZ A;  5TMF A;  4Q4Z A;  2NVQ C;  1TWH K;  3I4M K;  2JA7 C;  5IYD C;  5C4X K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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