5C44C

Crystal structure of a transcribing rna polymerase ii complex reveals a complete transcription bubble
Total Genus 50
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
50
sequence length
265
structure length
265
Chain Sequence
EGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Crystal Structure of a Transcribing RNA Polymerase II Complex Reveals a Complete Transcription Bubble.
pubmed doi rcsb
source organism Saccharomyces cerevisiae (strain atcc 204508 / s288c)
molecule tags Transferase/dna/rna
total genus 50
structure length 265
sequence length 265
ec nomenclature
pdb deposition date 2015-06-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 5c44C02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 5c44C01
4BBSK 5FLMC 5C4JK 3GTGK 1TWGC 2CW0A 1I6VA 4JK1A 5IYCC 4YFNA 4C3JC 4G7ZA 2O5IA 5M5XK 4A3IK 3GTPC 3S14K 2NVYC 2WB1D 2R7ZC 4KMUA 4A3LK 1YNNA 4YG2A 2NVTC 1WCMK 4BY7C 1TWFC 3I4NK 3PO2C 1TWAK 3HKZL 2A69A 4ZH4A 5D4DA 1I50C 2A6EA 4C3HC 3FKIC 2R92C 3PO3C 3S15C 3HOZK 5IYBK 2BE5A 2A68A 3HOVK 3GTLC 4XLNA 3S1RC 2WAQL 5M3MK 5TMCA 4A3MC 5IP7K 2E2IK 3S1QK 5IP9K 3I4MK 4XSXA 3GTQC 1Y1VK 3GTMC 4C3IC 3CQZK 1I6HK 3H0GC 3WODA 2B63C 5FJ8K 5C3EC 3S1MC 3GTJK 4A3FC 3K7AC 2NVQK 4OINA 2R93C 1XPPA 3S2DK 4BXXK 3HOWK 4Y7NK 4Y52K 3S17C 2WAQD 3HOUC 4OIPA 2E2JC 1BDFA 2YU9C 3M3YK 1K83C 4C2MC 5C44C 2E2HC 2JA7C 4BBRC 4A3DK 4X6AK 1ZYRA 1SMYA 3H3VL 4YFKA 4XLPA 1TWCC 5FLMK 2Y0SL 3S1NC 4Q4ZA 4C3JK 4OIOA 5IYDC 1SFOC 4Q5SA 4A3CC 4AYBL 3EQLA 1Y1WC 4A3EC 2PPBA 4A3LC 2JA6K 2NVTK 4BY7K 2NVXC 3HOYK 1TWAC 4A3KK 4MEYA 5M5WK 3PO2K 1IW7A 4XSZA 3HKZD 3RZDC 4OIRA 3M4OC 3H3VD 1I50K 3S2HC 2Y0SD 2JA5C 4C3HK 3FKIK 2R92K 3S16K 3PO3K 4A3JK 3GTOC 4AYBD 4BY1C 1TWHC 3GTLK 1R9TC 2VUMC 5C4XC 3S1RK 2JA8K 4A3BC 2E2IC 4LK1A 3S1QC 4A3GC 5IP9C 4A3MK 3HOXC 4LJZA 3GTKC 1Y1VC 3RZOC 4A93K 3GTQK 3CQZC 4OIQA 4C3IK 3GTMK 3H0GK 1I3QC 4YFXA 2B63K 5C3EK 3S1MK 2A6HA 4BBSC 3K7AK 5C4JC 3GTGC 2R93K 4A3IC 1TWGK 5IYCK 4Y7NC 4MQ9A 4QIWL 3S14C 4G7OA 3GTPK 2NVYK 2YU9K 2E2JK 3HOUK 2R7ZK 1K83K 1WCMC 3DXJA 4NOIA 4C2MK 5C44K 4A3DC 3I4NC 1YNJA 1TWFK 4BBRK 5M5YK 2E2HK 5TMFA 1TWCK 2O5JA 3S1NK 3HOZC 3S15K 5IYBC 1SFOK 5IYDK 4QIWD 4MEXA 1Y1WK 4A3CK 4KN4A 2JA6C 3HOVC 4G7HA 4LLGA 2PMZL 4A3EK 2JA7K 3HOYC 5M3FK 4A3KC 4QJVB 2NVXK 5IP7C 3I4MC 2PA8L 3RZDK 3M4OK 1I6HC 3S2HK 3S16C 2JA5K 3GTJC 4A3JC 2NVQC 4A3FK 3GTOK 4BY1K 1TWHK 2PMZD 4Y52C 3S2DC 3HOWC 2JA8C 4BXXC 5C4XK 1R9TK 4KN7A 2WB1L 2VUMK 4A3BK 3S17K 4A3GK 4GZYA 4A93C 3M3YC 3HOXK 4LK0A 4QJVA 2PA8D 3GTKK 1HQMA 3RZOK 4X6AC 1I3QK
chains in the Genus database with same CATH superfamily
3AD8C 4DDQA 1I6VA 4C3JC 3CF5S 5JVGS 3VA7A 2WB1D 2R7ZC 1YNNA 2NVTC 3I4NK 3HKZL 1TWAK 1J6WA 5JVOA 1I50C 2A6EA 2R92C 3FKIC 3PO3C 5IYBK 2ZJRS 4XLNA 3GEHA 2WAQL 2GAGC 3FOEA 5IP7K 3S1QK 3NUHA 4GTLA 4XSXA 1F7VA 1Y1VK 3CQZK 4WCES 5FJ8K 3WODA 2B63C 1BJTA 3S1MC 2V6SA 2ZUEA 1XPPA 4Y7NK 2WAQD 1BGWA 3HOUC 1EK8A 2E2JC 1BDFA 3AD9C 2JA7C 1IE0A 4BBRC 4X6AK 1O24A 3AQOA 1SMYA 5JVHS 4XLPA 2Y0SL 3GTMA 3OREA 3H0GA 1Y1WC 2JA6K 4LOWA 4IO9S 4KMHA 3HOYK 1TWAC 4MEYA 4XSZA 2NVYA 4KM8A 4KASA 2Y0SD 1WQFA 1TWFA 3S16K 1XXAA 1VH2A 4GTDA 5IOTA 4A3BC 4LK1A 3S1QC 4A3MK 3OPFA 4WFAS 4KAWX 3FOFA 4A93K 1Y1VC 3CQZC 4XCHA 2NVXA 1I3QC 4KDDA 2R93K 3BUEA 1TWGK 4Y7NC 3GSIA 4QIWL 1PJ7A 4J3NA 2JA5A 3G4AA 3GTPK 1DD5A 4O2DA 1R9TA 4C2MK 4NOIA 2E2HK 1USMA 5IOQA 4WJ3M 1YNJA 5CHPA 1TWCK 3S15K 4RMFA 1SFOK 1IL2A 1VGXA 4QIWD 4A3CK 1WORA 4A3EK 2JA6C 3HOVC 4G7HA 3GTGA 1L0WA 3HOYC 4QJVB 1DCOA 1O2FB 5E68A 4LR2A 3S16C 3GTJC 4BY1K 2VUMK 2GSNA 5DM7S 4GZYA 4A93C 3M3YC 3GTKK 4PABA 1J6XA 4G0VA 2ZFZA 5C4JK 1PJ6A 1TWGC 3Q3QA 4JK1A 2O5IA 3LAPA 1PJ5A 4G0UA 3ADAC 3GTPC 3S14K 4A3LK 1XZQA 4BY7C 3PO2C 2A69A 4ZH4A 5D4DA 1B4AA 3ERED 1ZQ1C 1FEUA 1XZPA 3S15C 3DLLS 2A68A 3GTLC 4KATA 3S1RC 1WSRA 2RH6A 2E2IK 2JH3A 1O26A 3GTQC 4C3IC 1I6HK 1X31C 4WF9S 5C3EC 2NVQK 1I50A 2R92A 4BXXK 3FKIA 1O27A 2YU9C 1K83C 5HQHA 4A3DK 1ZYRA 3H3VL 4YFKA 5FLMK 1G51A 4GTBA 2B63A 1WQHA 5L46A 1EQRA 3GEIA 4P5AA 4AYBL 3LYWA 4A3LC 3V4GA 4U67S 3JSTA 4IOAS 3HKZD 3RZDC 1EH1A 3H3VD 3TTGA 2JA7A 1XXBA 3S2HC 4KB2A 4C3HK 1C0AA 4A3JK 3GTOC 4AYBD 1TWHC 5C4XC 2JA8K 2E2IC 4A3GC 1ZXOA 4P5BA 1Y1WA 4WFNS 3HOXC 3RZOC 2XCQA 4LQYA 3T01A 3GTMK 3H0GK 4GTFA 4P9SA 2L3UA 4WFBS 3K7AK 1EI6A 4BLAA 5CJ9A 3L4JA 2V6TA 4G7OA 4IOCS 1INNA 4G0WA 2NVYK 3AH5A 3DXJA 5C44K 4A3DC 3I4NC 4PAAA 1TWFK 5TMFA 3S1NK 1I3QA 5IYBC 5IYDK 2KWAA 2PMZL 4LLGA 3GIRA 1ZBSA 5M3FK 2NVXK 5IP7C 1GE9A 1ISEA 3M4OK 2JA5K 4A3JC 3A8KA 4A3FK 2PMZD 1R9TK 4GT9A 2JA8C 1XZQB 3S17K 1O2BA 4X6AC 1XZPB 4BBSK 3GTGK 2CW0A 4G7ZA 4A3IK 4YFNA 3GTJA 4GFQA 2NVYC 1B4BA 4KMUA 1WCMK 1TWFC 1VJEA 5TJ3A 1WCMA 2P5MA 3HOZK 3PIPS 5EGEA 1DCPA 3A8JA 1UV7A 5M3MK 5TMCA 4A3MC 4KARA 4C45A 3I4MK 1F7UA 1KQ4A 3N0CA 3S0XA 1WOPA 3TFJA 4A3FC 2R93C 1RU0A 1F93A 3S2DK 4Y52K 2KQ1A 3HOWK 2L5NA 1WOSA 3S17C 2V6UA 3GTLA 1EFWA 4C2MC 1AB4A 2E2HC 3T00A 1O28A 3GTQA 1TWCC 4Q4ZA 4C3JK 1SFOC 4A3CC 3TFIA 4A3EC 2NVTK 2P8TA 4A3KK 5M5WK 1IW7A 2YU9A 2R7ZA 4FM9A 4OIRA 3IPJA 4FZBA 1K83A 1I50K 2R92K 3PO3K 3FKIK 1XXCA 2ZUFA 1JQWA 5HL8A 1IBAA 4BY1C 2VUMC 3LAJA 3CAGA 4M1XA 3GTKC 3GDZA 4YFXA 2B63K 3S1MK 2A6HA 5C4JC 3AQPA 5IYCK 5JFEA 4MQ9A 3S14C 3L4KA 3G4CA 3LPXA 3HOUK 2E2JK 3GTOA 1TWHA 2JA7K 2CFAA 4KMAA 4BBRK 5M5YK 2FQOA 2O5JA 3N0BA 1Y1WK 2Y3PA 4A3KC 4WILA 4GTAA 2PA8L 5EGHA 1V5VA 4KM9A 1I6HC 1TWAA 2NVQC 1WOOA 4BXXC 2KPUA 4KN7A 4A3BK 2PA8D 5IORA 3BP8C 1I3QK 3HXAA 5FLMC 1Y1VA 2GAHC 5IYCC 3CQZA 2FQTA 5M5XK 1WSVA 2GSUA 4YG2A 2RGRA 1WQGA 3T02A 3BP3A 4C3HC 1DCHA 2BE5A 1J6VA 3HOVK 3QX3A 3N3YA 4KMDA 1O25A 5IP9K 3A8IA 2JA6A 1IQ0A 3GTMC 3H0GC 1WIHA 4GTEA 3GTJK 5IOSA 3K7AC 4OINA 1IS1A 4KC6A 1VLOA 4OIPA 3M3YK 1USOA 5C44C 3GEEA 4GTCA 3SZZA 3S1NC 4OIOA 5IYDC 4Q5SA 3EQLA 1JOEA 1VRQC 2PPBA 1BS2A 2R93A 1TWGA 2GSOA 4BY7K 2NVXC 3PO2K 3GTPA 3M4OC 1F9NA 2E2HA 2JA5C 2D6FC 4BKWA 1HI9A 1TWCA 3GTLK 5HL7S 1R9TC 3S1RK 1SFOA 5IP9C 2CFAB 4LJZA 3GTQK 4OIQA 4C3IK 2PHCB 5C3EK 4BBSC 4AH6A 3GTGC 4A3IC 1ZVUA 2ZJPS 3MMLB 2YU9K 2R7ZK 1O29A 1K83K 1WCMC 2EBBA 4ILDA 3SZYA 3TFHA 2VUMA 2KXYA 2E2IA 4BLBA 4WJ4A 3AD7C 3GTKA 3HOZC 4MEXA 4KN4A 3PIOS 3OEPA 1YX2A 3I4MC 4KB4A 3RZDK 1J98A 1JVIA 3S2HK 2XCOA 3GTOK 1TWHK 4Y52C 3S2DC 5C4XK 3HOWC 3FHZA 5DM6S 2WB1L 4A3GK 2W7VA 3HOXK 4LK0A 4QJVA 3RZOK 1O2AA 1HQMA 2ZJQS 2XCRB 1YCLA
chains in the Genus database with same CATH topology
4BBSK 5FLMC 5C4JK 3GTGK 1TWGC 2CW0A 1I6VA 4JK1A 5IYCC 4YFNA 4C3JC 4G7ZA 2O5IA 5M5XK 4A3IK 3GTPC 3S14K 2NVYC 2WB1D 2R7ZC 4KMUA 4A3LK 1YNNA 4YG2A 2NVTC 1WCMK 4BY7C 1TWFC 3I4NK 3PO2C 1TWAK 3HKZL 2A69A 4ZH4A 5D4DA 1I50C 2A6EA 4C3HC 3FKIC 2R92C 3PO3C 3S15C 3HOZK 5IYBK 2BE5A 2A68A 3HOVK 3GTLC 4XLNA 3S1RC 2WAQL 5M3MK 5TMCA 4A3MC 5IP7K 2E2IK 3S1QK 5IP9K 3I4MK 4XSXA 3GTQC 1Y1VK 3GTMC 4C3IC 3CQZK 1I6HK 3H0GC 3WODA 2B63C 5FJ8K 5C3EC 3S1MC 3GTJK 4A3FC 3K7AC 2NVQK 4OINA 2R93C 1XPPA 3S2DK 4BXXK 3HOWK 4Y7NK 4Y52K 3S17C 2WAQD 3HOUC 4OIPA 2E2JC 1BDFA 2YU9C 3M3YK 1K83C 4C2MC 5C44C 2E2HC 2JA7C 4BBRC 4A3DK 4X6AK 1ZYRA 1SMYA 3H3VL 4YFKA 4XLPA 1TWCC 5FLMK 2Y0SL 3S1NC 4Q4ZA 4C3JK 4OIOA 5IYDC 1SFOC 4Q5SA 4A3CC 4AYBL 3EQLA 1Y1WC 4A3EC 2PPBA 4A3LC 2JA6K 2NVTK 4BY7K 2NVXC 3HOYK 1TWAC 4A3KK 4MEYA 5M5WK 3PO2K 1IW7A 4XSZA 3HKZD 3RZDC 4OIRA 3M4OC 3H3VD 1I50K 3S2HC 2Y0SD 2JA5C 4C3HK 3FKIK 2R92K 3S16K 3PO3K 4A3JK 3GTOC 4AYBD 4BY1C 1TWHC 3GTLK 1R9TC 2VUMC 5C4XC 3S1RK 2JA8K 4A3BC 2E2IC 4LK1A 3S1QC 4A3GC 5IP9C 4A3MK 3HOXC 4LJZA 3GTKC 1Y1VC 3RZOC 4A93K 3GTQK 3CQZC 4OIQA 4C3IK 3GTMK 3H0GK 1I3QC 4YFXA 2B63K 5C3EK 3S1MK 2A6HA 4BBSC 3K7AK 5C4JC 3GTGC 2R93K 4A3IC 1TWGK 5IYCK 4Y7NC 4MQ9A 4QIWL 3S14C 4G7OA 3GTPK 2NVYK 2YU9K 2E2JK 3HOUK 2R7ZK 1K83K 1WCMC 3DXJA 4NOIA 4C2MK 5C44K 4A3DC 3I4NC 1YNJA 1TWFK 4BBRK 5M5YK 2E2HK 5TMFA 1TWCK 2O5JA 3S1NK 3HOZC 3S15K 5IYBC 1SFOK 5IYDK 4QIWD 4MEXA 1Y1WK 4A3CK 4KN4A 2JA6C 3HOVC 4G7HA 4LLGA 2PMZL 4A3EK 2JA7K 3HOYC 5M3FK 4A3KC 4QJVB 2NVXK 5IP7C 3I4MC 2PA8L 3RZDK 3M4OK 1I6HC 3S2HK 3S16C 2JA5K 3GTJC 4A3JC 2NVQC 4A3FK 3GTOK 4BY1K 1TWHK 2PMZD 4Y52C 3S2DC 3HOWC 2JA8C 4BXXC 5C4XK 1R9TK 4KN7A 2WB1L 2VUMK 4A3BK 3S17K 4A3GK 4GZYA 4A93C 3M3YC 3HOXK 4LK0A 4QJVA 2PA8D 3GTKK 1HQMA 3RZOK 4X6AC 1I3QK
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4BBS K;  5FLM C;  5C4J K;  3GTG K;  1TWG C;  2CW0 A;  1I6V A;  4JK1 A;  5IYC C;  4YFN A;  4C3J C;  4G7Z A;  2O5I A;  5M5X K;  4A3I K;  3GTP C;  3S14 K;  2NVY C;  2WB1 D;  2R7Z C;  4KMU A;  4A3L K;  1YNN A;  4YG2 A;  2NVT C;  1WCM K;  4BY7 C;  1TWF C;  3I4N K;  3PO2 C;  1TWA K;  3HKZ L;  2A69 A;  4ZH4 A;  5D4D A;  1I50 C;  2A6E A;  4C3H C;  3FKI C;  2R92 C;  3PO3 C;  3S15 C;  3HOZ K;  5IYB K;  2BE5 A;  2A68 A;  3HOV K;  3GTL C;  4XLN A;  3S1R C;  2WAQ L;  5M3M K;  5TMC A;  4A3M C;  5IP7 K;  2E2I K;  3S1Q K;  5IP9 K;  3I4M K;  4XSX A;  3GTQ C;  1Y1V K;  3GTM C;  4C3I C;  3CQZ K;  1I6H K;  3H0G C;  3WOD A;  2B63 C;  5FJ8 K;  5C3E C;  3S1M C;  3GTJ K;  4A3F C;  3K7A C;  2NVQ K;  4OIN A;  2R93 C;  1XPP A;  3S2D K;  4BXX K;  3HOW K;  4Y7N K;  4Y52 K;  3S17 C;  2WAQ D;  3HOU C;  4OIP A;  2E2J C;  1BDF A;  2YU9 C;  3M3Y K;  1K83 C;  4C2M C;  5C44 C;  2E2H C;  2JA7 C;  4BBR C;  4A3D K;  4X6A K;  1ZYR A;  1SMY A;  3H3V L;  4YFK A;  4XLP A;  1TWC C;  5FLM K;  2Y0S L;  3S1N C;  4Q4Z A;  4C3J K;  4OIO A;  5IYD C;  1SFO C;  4Q5S A;  4A3C C;  4AYB L;  3EQL A;  1Y1W C;  4A3E C;  2PPB A;  4A3L C;  2JA6 K;  2NVT K;  4BY7 K;  2NVX C;  3HOY K;  1TWA C;  4A3K K;  4MEY A;  5M5W K;  3PO2 K;  1IW7 A;  4XSZ A;  3HKZ D;  3RZD C;  4OIR A;  3M4O C;  3H3V D;  1I50 K;  3S2H C;  2Y0S D;  2JA5 C;  4C3H K;  3FKI K;  2R92 K;  3S16 K;  3PO3 K;  4A3J K;  3GTO C;  4AYB D;  4BY1 C;  1TWH C;  3GTL K;  1R9T C;  2VUM C;  5C4X C;  3S1R K;  2JA8 K;  4A3B C;  2E2I C;  4LK1 A;  3S1Q C;  4A3G C;  5IP9 C;  4A3M K;  3HOX C;  4LJZ A;  3GTK C;  1Y1V C;  3RZO C;  4A93 K;  3GTQ K;  3CQZ C;  4OIQ A;  4C3I K;  3GTM K;  3H0G K;  1I3Q C;  4YFX A;  2B63 K;  5C3E K;  3S1M K;  2A6H A;  4BBS C;  3K7A K;  5C4J C;  3GTG C;  2R93 K;  4A3I C;  1TWG K;  5IYC K;  4Y7N C;  4MQ9 A;  4QIW L;  3S14 C;  4G7O A;  3GTP K;  2NVY K;  2YU9 K;  2E2J K;  3HOU K;  2R7Z K;  1K83 K;  1WCM C;  3DXJ A;  4NOI A;  4C2M K;  5C44 K;  4A3D C;  3I4N C;  1YNJ A;  1TWF K;  4BBR K;  5M5Y K;  2E2H K;  5TMF A;  1TWC K;  2O5J A;  3S1N K;  3HOZ C;  3S15 K;  5IYB C;  1SFO K;  5IYD K;  4QIW D;  4MEX A;  1Y1W K;  4A3C K;  4KN4 A;  2JA6 C;  3HOV C;  4G7H A;  4LLG A;  2PMZ L;  4A3E K;  2JA7 K;  3HOY C;  5M3F K;  4A3K C;  4QJV B;  2NVX K;  5IP7 C;  3I4M C;  2PA8 L;  3RZD K;  3M4O K;  1I6H C;  3S2H K;  3S16 C;  2JA5 K;  3GTJ C;  4A3J C;  2NVQ C;  4A3F K;  3GTO K;  4BY1 K;  1TWH K;  2PMZ D;  4Y52 C;  3S2D C;  3HOW C;  2JA8 C;  4BXX C;  5C4X K;  1R9T K;  4KN7 A;  2WB1 L;  2VUM K;  4A3B K;  3S17 K;  4A3G K;  4GZY A;  4A93 C;  3M3Y C;  3HOX K;  4LK0 A;  4QJV A;  2PA8 D;  3GTK K;  1HQM A;  3RZO K;  4X6A C;  1I3Q K; 
#chains in the Genus database with same CATH topology
 3AD8 C;  4DDQ A;  1I6V A;  4C3J C;  3CF5 S;  5JVG S;  3VA7 A;  2WB1 D;  2R7Z C;  1YNN A;  2NVT C;  3I4N K;  3HKZ L;  1TWA K;  1J6W A;  5JVO A;  1I50 C;  2A6E A;  2R92 C;  3FKI C;  3PO3 C;  5IYB K;  2ZJR S;  4XLN A;  3GEH A;  2WAQ L;  2GAG C;  3FOE A;  5IP7 K;  3S1Q K;  3NUH A;  4GTL A;  4XSX A;  1F7V A;  1Y1V K;  3CQZ K;  4WCE S;  5FJ8 K;  3WOD A;  2B63 C;  1BJT A;  3S1M C;  2V6S A;  2ZUE A;  1XPP A;  4Y7N K;  2WAQ D;  1BGW A;  3HOU C;  1EK8 A;  2E2J C;  1BDF A;  3AD9 C;  2JA7 C;  1IE0 A;  4BBR C;  4X6A K;  1O24 A;  3AQO A;  1SMY A;  5JVH S;  4XLP A;  2Y0S L;  3GTM A;  3ORE A;  3H0G A;  1Y1W C;  2JA6 K;  4LOW A;  4IO9 S;  4KMH A;  3HOY K;  1TWA C;  4MEY A;  4XSZ A;  2NVY A;  4KM8 A;  4KAS A;  2Y0S D;  1WQF A;  1TWF A;  3S16 K;  1XXA A;  1VH2 A;  4GTD A;  5IOT A;  4A3B C;  4LK1 A;  3S1Q C;  4A3M K;  3OPF A;  4WFA S;  4KAW X;  3FOF A;  4A93 K;  1Y1V C;  3CQZ C;  4XCH A;  2NVX A;  1I3Q C;  4KDD A;  2R93 K;  3BUE A;  1TWG K;  4Y7N C;  3GSI A;  4QIW L;  1PJ7 A;  4J3N A;  2JA5 A;  3G4A A;  3GTP K;  1DD5 A;  4O2D A;  1R9T A;  4C2M K;  4NOI A;  2E2H K;  1USM A;  5IOQ A;  4WJ3 M;  1YNJ A;  5CHP A;  1TWC K;  3S15 K;  4RMF A;  1SFO K;  1IL2 A;  1VGX A;  4QIW D;  4A3C K;  1WOR A;  4A3E K;  2JA6 C;  3HOV C;  4G7H A;  3GTG A;  1L0W A;  3HOY C;  4QJV B;  1DCO A;  1O2F B;  5E68 A;  4LR2 A;  3S16 C;  3GTJ C;  4BY1 K;  2VUM K;  2GSN A;  5DM7 S;  4GZY A;  4A93 C;  3M3Y C;  3GTK K;  4PAB A;  1J6X A;  4G0V A;  2ZFZ A;  5C4J K;  1PJ6 A;  1TWG C;  3Q3Q A;  4JK1 A;  2O5I A;  3LAP A;  1PJ5 A;  4G0U A;  3ADA C;  3GTP C;  3S14 K;  4A3L K;  1XZQ A;  4BY7 C;  3PO2 C;  2A69 A;  4ZH4 A;  5D4D A;  1B4A A;  3ERE D;  1ZQ1 C;  1FEU A;  1XZP A;  3S15 C;  3DLL S;  2A68 A;  3GTL C;  4KAT A;  3S1R C;  1WSR A;  2RH6 A;  2E2I K;  2JH3 A;  1O26 A;  3GTQ C;  4C3I C;  1I6H K;  1X31 C;  4WF9 S;  5C3E C;  2NVQ K;  1I50 A;  2R92 A;  4BXX K;  3FKI A;  1O27 A;  2YU9 C;  1K83 C;  5HQH A;  4A3D K;  1ZYR A;  3H3V L;  4YFK A;  5FLM K;  1G51 A;  4GTB A;  2B63 A;  1WQH A;  5L46 A;  1EQR A;  3GEI A;  4P5A A;  4AYB L;  3LYW A;  4A3L C;  3V4G A;  4U67 S;  3JST A;  4IOA S;  3HKZ D;  3RZD C;  1EH1 A;  3H3V D;  3TTG A;  2JA7 A;  1XXB A;  3S2H C;  4KB2 A;  4C3H K;  1C0A A;  4A3J K;  3GTO C;  4AYB D;  1TWH C;  5C4X C;  2JA8 K;  2E2I C;  4A3G C;  1ZXO A;  4P5B A;  1Y1W A;  4WFN S;  3HOX C;  3RZO C;  2XCQ A;  4LQY A;  3T01 A;  3GTM K;  3H0G K;  4GTF A;  4P9S A;  2L3U A;  4WFB S;  3K7A K;  1EI6 A;  4BLA A;  5CJ9 A;  3L4J A;  2V6T A;  4G7O A;  4IOC S;  1INN A;  4G0W A;  2NVY K;  3AH5 A;  3DXJ A;  5C44 K;  4A3D C;  3I4N C;  4PAA A;  1TWF K;  5TMF A;  3S1N K;  1I3Q A;  5IYB C;  5IYD K;  2KWA A;  2PMZ L;  4LLG A;  3GIR A;  1ZBS A;  5M3F K;  2NVX K;  5IP7 C;  1GE9 A;  1ISE A;  3M4O K;  2JA5 K;  4A3J C;  3A8K A;  4A3F K;  2PMZ D;  1R9T K;  4GT9 A;  2JA8 C;  1XZQ B;  3S17 K;  1O2B A;  4X6A C;  1XZP B;  4BBS K;  3GTG K;  2CW0 A;  4G7Z A;  4A3I K;  4YFN A;  3GTJ A;  4GFQ A;  2NVY C;  1B4B A;  4KMU A;  1WCM K;  1TWF C;  1VJE A;  5TJ3 A;  1WCM A;  2P5M A;  3HOZ K;  3PIP S;  5EGE A;  1DCP A;  3A8J A;  1UV7 A;  5M3M K;  5TMC A;  4A3M C;  4KAR A;  4C45 A;  3I4M K;  1F7U A;  1KQ4 A;  3N0C A;  3S0X A;  1WOP A;  3TFJ A;  4A3F C;  2R93 C;  1RU0 A;  1F93 A;  3S2D K;  4Y52 K;  2KQ1 A;  3HOW K;  2L5N A;  1WOS A;  3S17 C;  2V6U A;  3GTL A;  1EFW A;  4C2M C;  1AB4 A;  2E2H C;  3T00 A;  1O28 A;  3GTQ A;  1TWC C;  4Q4Z A;  4C3J K;  1SFO C;  4A3C C;  3TFI A;  4A3E C;  2NVT K;  2P8T A;  4A3K K;  5M5W K;  1IW7 A;  2YU9 A;  2R7Z A;  4FM9 A;  4OIR A;  3IPJ A;  4FZB A;  1K83 A;  1I50 K;  2R92 K;  3PO3 K;  3FKI K;  1XXC A;  2ZUF A;  1JQW A;  5HL8 A;  1IBA A;  4BY1 C;  2VUM C;  3LAJ A;  3CAG A;  4M1X A;  3GTK C;  3GDZ A;  4YFX A;  2B63 K;  3S1M K;  2A6H A;  5C4J C;  3AQP A;  5IYC K;  5JFE A;  4MQ9 A;  3S14 C;  3L4K A;  3G4C A;  3LPX A;  3HOU K;  2E2J K;  3GTO A;  1TWH A;  2JA7 K;  2CFA A;  4KMA A;  4BBR K;  5M5Y K;  2FQO A;  2O5J A;  3N0B A;  1Y1W K;  2Y3P A;  4A3K C;  4WIL A;  4GTA A;  2PA8 L;  5EGH A;  1V5V A;  4KM9 A;  1I6H C;  1TWA A;  2NVQ C;  1WOO A;  4BXX C;  2KPU A;  4KN7 A;  4A3B K;  2PA8 D;  5IOR A;  3BP8 C;  1I3Q K;  3HXA A;  5FLM C;  1Y1V A;  2GAH C;  5IYC C;  3CQZ A;  2FQT A;  5M5X K;  1WSV A;  2GSU A;  4YG2 A;  2RGR A;  1WQG A;  3T02 A;  3BP3 A;  4C3H C;  1DCH A;  2BE5 A;  1J6V A;  3HOV K;  3QX3 A;  3N3Y A;  4KMD A;  1O25 A;  5IP9 K;  3A8I A;  2JA6 A;  1IQ0 A;  3GTM C;  3H0G C;  1WIH A;  4GTE A;  3GTJ K;  5IOS A;  3K7A C;  4OIN A;  1IS1 A;  4KC6 A;  1VLO A;  4OIP A;  3M3Y K;  1USO A;  5C44 C;  3GEE A;  4GTC A;  3SZZ A;  3S1N C;  4OIO A;  5IYD C;  4Q5S A;  3EQL A;  1JOE A;  1VRQ C;  2PPB A;  1BS2 A;  2R93 A;  1TWG A;  2GSO A;  4BY7 K;  2NVX C;  3PO2 K;  3GTP A;  3M4O C;  1F9N A;  2E2H A;  2JA5 C;  2D6F C;  4BKW A;  1HI9 A;  1TWC A;  3GTL K;  5HL7 S;  1R9T C;  3S1R K;  1SFO A;  5IP9 C;  2CFA B;  4LJZ A;  3GTQ K;  4OIQ A;  4C3I K;  2PHC B;  5C3E K;  4BBS C;  4AH6 A;  3GTG C;  4A3I C;  1ZVU A;  2ZJP S;  3MML B;  2YU9 K;  2R7Z K;  1O29 A;  1K83 K;  1WCM C;  2EBB A;  4ILD A;  3SZY A;  3TFH A;  2VUM A;  2KXY A;  2E2I A;  4BLB A;  4WJ4 A;  3AD7 C;  3GTK A;  3HOZ C;  4MEX A;  4KN4 A;  3PIO S;  3OEP A;  1YX2 A;  3I4M C;  4KB4 A;  3RZD K;  1J98 A;  1JVI A;  3S2H K;  2XCO A;  3GTO K;  1TWH K;  4Y52 C;  3S2D C;  5C4X K;  3HOW C;  3FHZ A;  5DM6 S;  2WB1 L;  4A3G K;  2W7V A;  3HOX K;  4LK0 A;  4QJV A;  3RZO K;  1O2A A;  1HQM A;  2ZJQ S;  2XCR B;  1YCL A; 
#chains in the Genus database with same CATH homology
 4BBS K;  5FLM C;  5C4J K;  3GTG K;  1TWG C;  2CW0 A;  1I6V A;  4JK1 A;  5IYC C;  4YFN A;  4C3J C;  4G7Z A;  2O5I A;  5M5X K;  4A3I K;  3GTP C;  3S14 K;  2NVY C;  2WB1 D;  2R7Z C;  4KMU A;  4A3L K;  1YNN A;  4YG2 A;  2NVT C;  1WCM K;  4BY7 C;  1TWF C;  3I4N K;  3PO2 C;  1TWA K;  3HKZ L;  2A69 A;  4ZH4 A;  5D4D A;  1I50 C;  2A6E A;  4C3H C;  3FKI C;  2R92 C;  3PO3 C;  3S15 C;  3HOZ K;  5IYB K;  2BE5 A;  2A68 A;  3HOV K;  3GTL C;  4XLN A;  3S1R C;  2WAQ L;  5M3M K;  5TMC A;  4A3M C;  5IP7 K;  2E2I K;  3S1Q K;  5IP9 K;  3I4M K;  4XSX A;  3GTQ C;  1Y1V K;  3GTM C;  4C3I C;  3CQZ K;  1I6H K;  3H0G C;  3WOD A;  2B63 C;  5FJ8 K;  5C3E C;  3S1M C;  3GTJ K;  4A3F C;  3K7A C;  2NVQ K;  4OIN A;  2R93 C;  1XPP A;  3S2D K;  4BXX K;  3HOW K;  4Y7N K;  4Y52 K;  3S17 C;  2WAQ D;  3HOU C;  4OIP A;  2E2J C;  1BDF A;  2YU9 C;  3M3Y K;  1K83 C;  4C2M C;  5C44 C;  2E2H C;  2JA7 C;  4BBR C;  4A3D K;  4X6A K;  1ZYR A;  1SMY A;  3H3V L;  4YFK A;  4XLP A;  1TWC C;  5FLM K;  2Y0S L;  3S1N C;  4Q4Z A;  4C3J K;  4OIO A;  5IYD C;  1SFO C;  4Q5S A;  4A3C C;  4AYB L;  3EQL A;  1Y1W C;  4A3E C;  2PPB A;  4A3L C;  2JA6 K;  2NVT K;  4BY7 K;  2NVX C;  3HOY K;  1TWA C;  4A3K K;  4MEY A;  5M5W K;  3PO2 K;  1IW7 A;  4XSZ A;  3HKZ D;  3RZD C;  4OIR A;  3M4O C;  3H3V D;  1I50 K;  3S2H C;  2Y0S D;  2JA5 C;  4C3H K;  3FKI K;  2R92 K;  3S16 K;  3PO3 K;  4A3J K;  3GTO C;  4AYB D;  4BY1 C;  1TWH C;  3GTL K;  1R9T C;  2VUM C;  5C4X C;  3S1R K;  2JA8 K;  4A3B C;  2E2I C;  4LK1 A;  3S1Q C;  4A3G C;  5IP9 C;  4A3M K;  3HOX C;  4LJZ A;  3GTK C;  1Y1V C;  3RZO C;  4A93 K;  3GTQ K;  3CQZ C;  4OIQ A;  4C3I K;  3GTM K;  3H0G K;  1I3Q C;  4YFX A;  2B63 K;  5C3E K;  3S1M K;  2A6H A;  4BBS C;  3K7A K;  5C4J C;  3GTG C;  2R93 K;  4A3I C;  1TWG K;  5IYC K;  4Y7N C;  4MQ9 A;  4QIW L;  3S14 C;  4G7O A;  3GTP K;  2NVY K;  2YU9 K;  2E2J K;  3HOU K;  2R7Z K;  1K83 K;  1WCM C;  3DXJ A;  4NOI A;  4C2M K;  5C44 K;  4A3D C;  3I4N C;  1YNJ A;  1TWF K;  4BBR K;  5M5Y K;  2E2H K;  5TMF A;  1TWC K;  2O5J A;  3S1N K;  3HOZ C;  3S15 K;  5IYB C;  1SFO K;  5IYD K;  4QIW D;  4MEX A;  1Y1W K;  4A3C K;  4KN4 A;  2JA6 C;  3HOV C;  4G7H A;  4LLG A;  2PMZ L;  4A3E K;  2JA7 K;  3HOY C;  5M3F K;  4A3K C;  4QJV B;  2NVX K;  5IP7 C;  3I4M C;  2PA8 L;  3RZD K;  3M4O K;  1I6H C;  3S2H K;  3S16 C;  2JA5 K;  3GTJ C;  4A3J C;  2NVQ C;  4A3F K;  3GTO K;  4BY1 K;  1TWH K;  2PMZ D;  4Y52 C;  3S2D C;  3HOW C;  2JA8 C;  4BXX C;  5C4X K;  1R9T K;  4KN7 A;  2WB1 L;  2VUM K;  4A3B K;  3S17 K;  4A3G K;  4GZY A;  4A93 C;  3M3Y C;  3HOX K;  4LK0 A;  4QJV A;  2PA8 D;  3GTK K;  1HQM A;  3RZO K;  4X6A C;  1I3Q K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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