5C44C

Crystal structure of a transcribing rna polymerase ii complex reveals a complete transcription bubble
Total Genus 50
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
50
sequence length
265
structure length
265
Chain Sequence
EGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Crystal Structure of a Transcribing RNA Polymerase II Complex Reveals a Complete Transcription Bubble.
pubmed doi rcsb
source organism Saccharomyces cerevisiae (strain atcc 204508 / s288c)
molecule tags Transferase/dna/rna
molecule keywords DNA-directed RNA polymerase II subunit RPB1
total genus 50
structure length 265
sequence length 265
ec nomenclature
pdb deposition date 2015-06-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 5c44C02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 5c44C01
3HKZD 5C4XK 4LLGA 2JA7C 4A93K 2A6EA 2E2JK 5IYDK 5IYCC 4BY7C 3HOXK 4Y52K 2E2HC 5IP9K 3H0GK 4BBRK 4LK0A 3GTJC 3M3YC 4C3IC 3CQZK 5C4JK 4KN4A 2B63K 2JA6K 4GZYA 3HOUK 1Y1VC 1I6VA 1YNNA 1WCMK 3GTGK 3S1NK 4A3CK 1TWAC 3WODA 5FLMC 4Q5SA 3GTQC 5M3FK 1TWHK 3GTQK 3GTKK 5M5XK 1R9TK 5C3EK 3S16K 2WAQL 2NVTK 1YNJA 4A3GK 3S2HK 1I50K 5FJ8K 2E2IK 4BY1K 4QJVB 4BXXC 2PMZD 4NOIA 2JA5C 2BE5A 5TMFA 3S1MK 4A3IC 4OINA 3H3VD 1HQMA 3GTLC 3I4MC 1BDFA 4A3CC 2O5JA 4A93C 2PPBA 3PO3C 1TWCK 1TWCC 3HOZK 3RZDK 1TWFC 4C3JK 4A3BK 2A68A 1I50C 2E2IC 3S17C 2O5IA 3S2DC 5C3EC 4QIWD 2Y0SL 3HOYK 4A3DC 4BXXK 1Y1WK 2NVYC 4A3LC 2PA8D 4KN7A 3S2HC 3FKIC 3FKIK 4C3HK 4KMUA 3HOVK 4X6AK 3HOYC 1I3QC 5M5YK 4XLPA 2WAQD 4C3HC 4C3JC 4A3KC 4AYBL 3S2DK 3RZDC 2WB1L 3M3YK 3PO2K 4BBSK 3H0GC 4AYBD 1K83K 4MEYA 4OIOA 2B63C 4YFXA 4LJZA 4Y7NK 3M4OK 4LK1A 1ZYRA 2A69A 4OIQA 3K7AC 3GTJK 3GTMC 2JA7K 2PA8L 1I3QK 1SFOK 3HOVC 2Y0SD 5C4XC 4QIWL 2JA8K 4A3LK 3S16C 3S1QC 2R92C 3HKZL 1TWHC 4G7ZA 2JA8C 2R93K 1SMYA 2R7ZK 2NVYK 1Y1WC 4A3BC 3HOUC 5IP7K 4A3MK 3HOZC 3PO3K 5D4DA 4A3EC 4A3FC 2PMZL 1TWFK 4OIRA 3S1MC 3K7AK 3S1RK 3GTOK 5IYCK 4BY7K 4A3JC 2NVXC 1XPPA 5IYDC 2E2JC 1K83C 3M4OC 4C2MK 5IP9C 4BBRC 2VUMK 3GTLK 2YU9C 3HOXC 3I4MK 1I6HK 3PO2C 4XLNA 2NVTC 1TWGC 4BY1C 3HOWC 4OIPA 5FLMK 2A6HA 4YFKA 2R7ZC 4ZH4A 4Q4ZA 3GTKC 3S1QK 3S14C 5IYBC 4XSXA 5IYBK 1TWAK 3H3VL 4MEXA 3S15C 5C4JC 5TMCA 4YFNA 2CW0A 5C44C 3RZOC 3HOWK 1SFOC 3S17K 2E2HK 2JA6C 3CQZC 4G7OA 4C3IK 1IW7A 3DXJA 1TWGK 3GTMK 4Y52C 4A3GC 4A3IK 4Y7NC 5M3MK 2NVQK 2JA5K 1I6HC 3GTOC 2YU9K 3GTPK 4BBSC 3EQLA 5C44K 4C2MC 2VUMC 4A3MC 4A3JK 2NVXK 3S15K 4A3KK 4JK1A 3S1RC 4A3EK 4A3FK 3S14K 1R9TC 3RZOK 3I4NK 3I4NC 4YG2A 5IP7C 2R92K 4X6AC 4G7HA 2R93C 2WB1D 1WCMC 3GTGC 3S1NC 4A3DK 3GTPC 4QJVA 4MQ9A 1Y1VK 2NVQC 5M5WK 4XSZA
chains in the Genus database with same CATH superfamily
5C4XK 3T02A 3HXAA 1IS1A 2E2JK 5IYDK 3TFHA 5IP9K 3CQZK 2KPUA 4GZYA 3HOUK 1ZBSA 4KMHA 4ILDA 3S1NK 3GTQC 5M3FK 1TWHK 1R9TK 5C3EK 1BS2A 2WAQL 1O25A 1WOSA 1RU0A 2JA5C 5TMFA 3S1MK 2O5JA 3GTLC 2PPBA 1TWCK 3RZDK 1VLOA 1I50C 4G0VA 3TFJA 4GTBA 3S2DC 1Y1WK 3S2HC 4C3HK 1I3QC 3SZZA 4LQYA 1ZXOA 3M3YK 1DCHA 3PO2K 3M4OK 4YFXA 3K7AC 3HOVC 4QIWL 3AD8C 2ZJPS 1C0AA 2JA6A 3TFIA 1TWHC 2R7ZK 1I50A 1Y1WC 5IOQA 3HOUC 1O24A 4A3EC 3S1RK 3S1MC 3M4OC 3AD9C 1GE9A 4BBRC 3GTLK 2YU9C 3A8IA 1PJ7A 1B4AA 2V6SA 3HOWC 3GTQA 1J6WA 1G51A 3FOEA 4KM9A 2JH3A 4ZH4A 5IYBK 1TWAK 5JVHS 3RZOC 5C44C 3L4KA 4O2DA 1F7VA 4G7OA 1IW7A 2P5MA 4Y52C 4A3GC 2YU9K 1O27A 3EQLA 1ISEA 4PABA 1KQ4A 2NVXA 3PIOS 4JK1A 4KARA 3I4NC 2FQOA 1JOEA 5EGHA 3A8KA 1WCMC 2E2HA 4A3DK 3GTPC 3GTOA 2NVQC 5M5WK 3L4JA 2ZFZA 2A6EA 1IQ0A 4FM9A 4Y52K 4BBRK 3H0GK 4KM8A 4C3IC 1Y1VC 1USMA 1I6VA 1YNNA 1EI6A 1SFOA 1I3QA 2GAGC 3GTGK 5HL8A 1TWAC 4GFQA 3GTQK 2XCOA 2KWAA 1X31C 2NVYA 2KQ1A 5FJ8K 1XXCA 2FQTA 4A3GK 3H3VD 1HQMA 4A3CC 4KMAA 5TJ3A 1DCOA 3HOZK 1TWCC 2XCQA 2E2IC 3S17C 4AH6A 2R7ZA 2O5IA 2GAHC 5C3EC 2Y0SL 3ADAC 4A3LC 1VGXA 3HOYC 4LR2A 4XLPA 2WAQD 1WCMA 1J6XA 3RZDC 2L5NA 2WB1L 3H0GC 3V4GA 4AYBD 5IOSA 3GDZA 4M1XA 4LJZA 3G4CA 1WOOA 4LK1A 1ZYRA 4GTAA 4XCHA 4DDQA 2PA8L 1I3QK 1SFOK 3OPFA 2JA8K 4A3LK 4BLBA 4KASA 3S1QC 2R92C 3GEHA 3H0GA 1VH2A 2R93K 2NVYK 2EBBA 4GTDA 4A3FC 3GIRA 3GTOK 3BP8C 4OIRA 3K7AK 1O29A 4BY7K 1XPPA 4C2MK 4WJ3M 5JVOA 3JSTA 1TWGC 1EH1A 4KATA 1J6VA 5FLMK 4YFKA 2R7ZC 2YU9A 3S1QK 1WSVA 5JVGS 3S14C 3OEPA 5C4JC 3S17K 2E2HK 3VA7A 2JA6C 3CQZC 4WCES 3AD7C 3GEEA 1TWAA 1JVIA 1B4BA 4BBSC 2VUMC 2NVXK 4IO9S 5EGEA 3S1RC 4A3EK 3RZOK 2R92K 1FEUA 4G7HA 2R93A 1DCPA 2R93C 4QJVA 3GTPA 3G4AA 2D6FC 4XSZA 3HOWK 3CAGA 4U67S 4BY7C 1DD5A 1PJ6A 3T00A 2E2HC 4LK0A 3GTJC 4PAAA 2JA6K 1ZVUA 3GTLA 1WCMK 5FLMC 3MMLB 2GSOA 3N3YA 1YNJA 4BLAA 1I50K 4QJVB 4BXXC 4FZBA 4NOIA 3DLLS 1PJ5A 2V6UA 2BE5A 3TTGA 1TWFA 4A3CK 1BDFA 2PHCB 4A93C 3PO3C 1AB4A 1TWFC 4C3JK 4A3BK 4RMFA 4A3DC 3LAJA 2PA8D 4KN7A 3FKIC 2ZJQS 4KMUA 4GTCA 1F7UA 4WFNS 1WQGA 4C3HC 1EK8A 4AYBL 3GTGA 3S2DK 1XZQB 5DM6S 4BBSK 3LYWA 4MEYA 4OIOA 4Y7NK 1R9TA 1Y1WA 3GTJK 2A69A 4OIQA 1JQWA 1WIHA 3GTMC 1TWHA 2JA7K 3LPXA 2CFAB 2Y0SD 3N0CA 5JFEA 3PIPS 3AQPA 3FKIA 3NUHA 5CHPA 3QX3A 3HKZL 1HI9A 1O28A 3AH5A 5IP7K 4KB4A 4A3MK 3HOZC 2GSUA 5D4DA 2PMZL 4WILA 3S0XA 5IYCK 1IL2A 4A93K 3HOXC 3PO2C 3CQZA 4BKWA 4OIPA 1WQFA 4WF9S 1V5VA 3A8JA 2W7VA 3GTKC 2JA5A 2ZUEA 3IPJA 3H3VL 3S15C 4YFNA 1SFOC 1IE0A 1F93A 4C3IK 3GTMK 1TWGK 2P8TA 4A3IK 4Y7NC 4KB2A 5M3MK 5C44K 4A3KK 4A3FK 3S14K 4YG2A 4X6AC 4GTFA 3S1NC 2VUMA 4IOAS 1Y1VK 4G0UA 1IBAA 3HKZD 4LLGA 2JA7C 5IYCC 2XCRB 1O2BA 3HOXK 2Y3PA 5DM7S 3M3YC 5CJ9A 5C4JK 4KN4A 2B63K 1XZQA 2RGRA 1VJEA 3WODA 4Q5SA 1XXBA 3GTKK 5M5XK 4GT9A 3S16K 2NVTK 1USOA 3S2HK 2E2IK 4BY1K 4P9SA 1WORA 2PMZD 3GSIA 2ZUFA 4A3IC 4OINA 1XZPB 3I4MC 1TWCA 1YCLA 2A68A 1J98A 4QIWD 3HOYK 4BXXK 2NVYC 3AQOA 1K83A 3FKIK 3HOVK 2L3UA 4WFBS 4X6AK 5M5YK 4C3JC 3FHZA 2JA7A 4A3KC 4P5BA 4G0WA 3GTJA 5HL7S 3LAPA 1VRQC 1XXAA 1K83K 2B63C 1WSRA 1XZPA 4KMDA 5C4XC 3ERED 5HQHA 1UV7A 1WOPA 2B63A 1O2AA 3S16C 3OREA 3T01A 3Q3QA 4C45A 4G7ZA 2JA8C 1SMYA 1F9NA 4KDDA 4A3BC 2E2IA 4WJ4A 4IOCS 1BGWA 1O26A 3PO3K 3GTKA 1TWFK 3BUEA 1L0WA 4A3JC 2NVXC 2VUMK 5IYDC 2E2JC 1K83C 5IP9C 3BP3A 3I4MK 1EQRA 1I6HK 1YX2A 4XLNA 4WFAS 2NVTC 4GTLA 1ZQ1C 4LOWA 4BY1C 3GEIA 4J3NA 3CF5S 5IORA 2A6HA 4Q4ZA 2ZJRS 2V6TA 5IYBC 4XSXA 1Y1VA 4MEXA 1TWGA 5TMCA 3SZYA 2CW0A 4KAWX 1EFWA 3DXJA 2RH6A 4GTEA 4P5AA 5E68A 2GSNA 2JA5K 1I6HC 3GTOC 3N0BA 2NVQK 3GTPK 4KC6A 4C2MC 4A3JK 4A3MC 3S15K 1O2FB 1BJTA 1R9TC 2R92A 3I4NK 5IP7C 2KXYA 1INNA 3GTMA 2CFAA 2WB1D 3GTGC 1WQHA 5IOTA 3FOFA 4MQ9A 5L46A
chains in the Genus database with same CATH topology
3HKZD 5C4XK 4LLGA 2JA7C 4A93K 2A6EA 2E2JK 5IYDK 5IYCC 4BY7C 3HOXK 4Y52K 2E2HC 5IP9K 3H0GK 4BBRK 4LK0A 3GTJC 3M3YC 4C3IC 3CQZK 5C4JK 4KN4A 2B63K 2JA6K 4GZYA 3HOUK 1Y1VC 1I6VA 1YNNA 1WCMK 3GTGK 3S1NK 4A3CK 1TWAC 3WODA 5FLMC 4Q5SA 3GTQC 5M3FK 1TWHK 3GTQK 3GTKK 5M5XK 1R9TK 5C3EK 3S16K 2WAQL 2NVTK 1YNJA 4A3GK 3S2HK 1I50K 5FJ8K 2E2IK 4BY1K 4QJVB 4BXXC 2PMZD 4NOIA 2JA5C 2BE5A 5TMFA 3S1MK 4A3IC 4OINA 3H3VD 1HQMA 3GTLC 3I4MC 1BDFA 4A3CC 2O5JA 4A93C 2PPBA 3PO3C 1TWCK 1TWCC 3HOZK 3RZDK 1TWFC 4C3JK 4A3BK 2A68A 1I50C 2E2IC 3S17C 2O5IA 3S2DC 5C3EC 4QIWD 2Y0SL 3HOYK 4A3DC 4BXXK 1Y1WK 2NVYC 4A3LC 2PA8D 4KN7A 3S2HC 3FKIC 3FKIK 4C3HK 4KMUA 3HOVK 4X6AK 3HOYC 1I3QC 5M5YK 4XLPA 2WAQD 4C3HC 4C3JC 4A3KC 4AYBL 3S2DK 3RZDC 2WB1L 3M3YK 3PO2K 4BBSK 3H0GC 4AYBD 1K83K 4MEYA 4OIOA 2B63C 4YFXA 4LJZA 4Y7NK 3M4OK 4LK1A 1ZYRA 2A69A 4OIQA 3K7AC 3GTJK 3GTMC 2JA7K 2PA8L 1I3QK 1SFOK 3HOVC 2Y0SD 5C4XC 4QIWL 2JA8K 4A3LK 3S16C 3S1QC 2R92C 3HKZL 1TWHC 4G7ZA 2JA8C 2R93K 1SMYA 2R7ZK 2NVYK 1Y1WC 4A3BC 3HOUC 5IP7K 4A3MK 3HOZC 3PO3K 5D4DA 4A3EC 4A3FC 2PMZL 1TWFK 4OIRA 3S1MC 3K7AK 3S1RK 3GTOK 5IYCK 4BY7K 4A3JC 2NVXC 1XPPA 5IYDC 2E2JC 1K83C 3M4OC 4C2MK 5IP9C 4BBRC 2VUMK 3GTLK 2YU9C 3HOXC 3I4MK 1I6HK 3PO2C 4XLNA 2NVTC 1TWGC 4BY1C 3HOWC 4OIPA 5FLMK 2A6HA 4YFKA 2R7ZC 4ZH4A 4Q4ZA 3GTKC 3S1QK 3S14C 5IYBC 4XSXA 5IYBK 1TWAK 3H3VL 4MEXA 3S15C 5C4JC 5TMCA 4YFNA 2CW0A 5C44C 3RZOC 3HOWK 1SFOC 3S17K 2E2HK 2JA6C 3CQZC 4G7OA 4C3IK 1IW7A 3DXJA 1TWGK 3GTMK 4Y52C 4A3GC 4A3IK 4Y7NC 5M3MK 2NVQK 2JA5K 1I6HC 3GTOC 2YU9K 3GTPK 4BBSC 3EQLA 5C44K 4C2MC 2VUMC 4A3MC 4A3JK 2NVXK 3S15K 4A3KK 4JK1A 3S1RC 4A3EK 4A3FK 3S14K 1R9TC 3RZOK 3I4NK 3I4NC 4YG2A 5IP7C 2R92K 4X6AC 4G7HA 2R93C 2WB1D 1WCMC 3GTGC 3S1NC 4A3DK 3GTPC 4QJVA 4MQ9A 1Y1VK 2NVQC 5M5WK 4XSZA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3HKZ D;  5C4X K;  4LLG A;  2JA7 C;  4A93 K;  2A6E A;  2E2J K;  5IYD K;  5IYC C;  4BY7 C;  3HOX K;  4Y52 K;  2E2H C;  5IP9 K;  3H0G K;  4BBR K;  4LK0 A;  3GTJ C;  3M3Y C;  4C3I C;  3CQZ K;  5C4J K;  4KN4 A;  2B63 K;  2JA6 K;  4GZY A;  3HOU K;  1Y1V C;  1I6V A;  1YNN A;  1WCM K;  3GTG K;  3S1N K;  4A3C K;  1TWA C;  3WOD A;  5FLM C;  4Q5S A;  3GTQ C;  5M3F K;  1TWH K;  3GTQ K;  3GTK K;  5M5X K;  1R9T K;  5C3E K;  3S16 K;  2WAQ L;  2NVT K;  1YNJ A;  4A3G K;  3S2H K;  1I50 K;  5FJ8 K;  2E2I K;  4BY1 K;  4QJV B;  4BXX C;  2PMZ D;  4NOI A;  2JA5 C;  2BE5 A;  5TMF A;  3S1M K;  4A3I C;  4OIN A;  3H3V D;  1HQM A;  3GTL C;  3I4M C;  1BDF A;  4A3C C;  2O5J A;  4A93 C;  2PPB A;  3PO3 C;  1TWC K;  1TWC C;  3HOZ K;  3RZD K;  1TWF C;  4C3J K;  4A3B K;  2A68 A;  1I50 C;  2E2I C;  3S17 C;  2O5I A;  3S2D C;  5C3E C;  4QIW D;  2Y0S L;  3HOY K;  4A3D C;  4BXX K;  1Y1W K;  2NVY C;  4A3L C;  2PA8 D;  4KN7 A;  3S2H C;  3FKI C;  3FKI K;  4C3H K;  4KMU A;  3HOV K;  4X6A K;  3HOY C;  1I3Q C;  5M5Y K;  4XLP A;  2WAQ D;  4C3H C;  4C3J C;  4A3K C;  4AYB L;  3S2D K;  3RZD C;  2WB1 L;  3M3Y K;  3PO2 K;  4BBS K;  3H0G C;  4AYB D;  1K83 K;  4MEY A;  4OIO A;  2B63 C;  4YFX A;  4LJZ A;  4Y7N K;  3M4O K;  4LK1 A;  1ZYR A;  2A69 A;  4OIQ A;  3K7A C;  3GTJ K;  3GTM C;  2JA7 K;  2PA8 L;  1I3Q K;  1SFO K;  3HOV C;  2Y0S D;  5C4X C;  4QIW L;  2JA8 K;  4A3L K;  3S16 C;  3S1Q C;  2R92 C;  3HKZ L;  1TWH C;  4G7Z A;  2JA8 C;  2R93 K;  1SMY A;  2R7Z K;  2NVY K;  1Y1W C;  4A3B C;  3HOU C;  5IP7 K;  4A3M K;  3HOZ C;  3PO3 K;  5D4D A;  4A3E C;  4A3F C;  2PMZ L;  1TWF K;  4OIR A;  3S1M C;  3K7A K;  3S1R K;  3GTO K;  5IYC K;  4BY7 K;  4A3J C;  2NVX C;  1XPP A;  5IYD C;  2E2J C;  1K83 C;  3M4O C;  4C2M K;  5IP9 C;  4BBR C;  2VUM K;  3GTL K;  2YU9 C;  3HOX C;  3I4M K;  1I6H K;  3PO2 C;  4XLN A;  2NVT C;  1TWG C;  4BY1 C;  3HOW C;  4OIP A;  5FLM K;  2A6H A;  4YFK A;  2R7Z C;  4ZH4 A;  4Q4Z A;  3GTK C;  3S1Q K;  3S14 C;  5IYB C;  4XSX A;  5IYB K;  1TWA K;  3H3V L;  4MEX A;  3S15 C;  5C4J C;  5TMC A;  4YFN A;  2CW0 A;  5C44 C;  3RZO C;  3HOW K;  1SFO C;  3S17 K;  2E2H K;  2JA6 C;  3CQZ C;  4G7O A;  4C3I K;  1IW7 A;  3DXJ A;  1TWG K;  3GTM K;  4Y52 C;  4A3G C;  4A3I K;  4Y7N C;  5M3M K;  2NVQ K;  2JA5 K;  1I6H C;  3GTO C;  2YU9 K;  3GTP K;  4BBS C;  3EQL A;  5C44 K;  4C2M C;  2VUM C;  4A3M C;  4A3J K;  2NVX K;  3S15 K;  4A3K K;  4JK1 A;  3S1R C;  4A3E K;  4A3F K;  3S14 K;  1R9T C;  3RZO K;  3I4N K;  3I4N C;  4YG2 A;  5IP7 C;  2R92 K;  4X6A C;  4G7H A;  2R93 C;  2WB1 D;  1WCM C;  3GTG C;  3S1N C;  4A3D K;  3GTP C;  4QJV A;  4MQ9 A;  1Y1V K;  2NVQ C;  5M5W K;  4XSZ A; 
#chains in the Genus database with same CATH topology
 5C4X K;  3T02 A;  3HXA A;  1IS1 A;  2E2J K;  5IYD K;  3TFH A;  5IP9 K;  3CQZ K;  2KPU A;  4GZY A;  3HOU K;  1ZBS A;  4KMH A;  4ILD A;  3S1N K;  3GTQ C;  5M3F K;  1TWH K;  1R9T K;  5C3E K;  1BS2 A;  2WAQ L;  1O25 A;  1WOS A;  1RU0 A;  2JA5 C;  5TMF A;  3S1M K;  2O5J A;  3GTL C;  2PPB A;  1TWC K;  3RZD K;  1VLO A;  1I50 C;  4G0V A;  3TFJ A;  4GTB A;  3S2D C;  1Y1W K;  3S2H C;  4C3H K;  1I3Q C;  3SZZ A;  4LQY A;  1ZXO A;  3M3Y K;  1DCH A;  3PO2 K;  3M4O K;  4YFX A;  3K7A C;  3HOV C;  4QIW L;  3AD8 C;  2ZJP S;  1C0A A;  2JA6 A;  3TFI A;  1TWH C;  2R7Z K;  1I50 A;  1Y1W C;  5IOQ A;  3HOU C;  1O24 A;  4A3E C;  3S1R K;  3S1M C;  3M4O C;  3AD9 C;  1GE9 A;  4BBR C;  3GTL K;  2YU9 C;  3A8I A;  1PJ7 A;  1B4A A;  2V6S A;  3HOW C;  3GTQ A;  1J6W A;  1G51 A;  3FOE A;  4KM9 A;  2JH3 A;  4ZH4 A;  5IYB K;  1TWA K;  5JVH S;  3RZO C;  5C44 C;  3L4K A;  4O2D A;  1F7V A;  4G7O A;  1IW7 A;  2P5M A;  4Y52 C;  4A3G C;  2YU9 K;  1O27 A;  3EQL A;  1ISE A;  4PAB A;  1KQ4 A;  2NVX A;  3PIO S;  4JK1 A;  4KAR A;  3I4N C;  2FQO A;  1JOE A;  5EGH A;  3A8K A;  1WCM C;  2E2H A;  4A3D K;  3GTP C;  3GTO A;  2NVQ C;  5M5W K;  3L4J A;  2ZFZ A;  2A6E A;  1IQ0 A;  4FM9 A;  4Y52 K;  4BBR K;  3H0G K;  4KM8 A;  4C3I C;  1Y1V C;  1USM A;  1I6V A;  1YNN A;  1EI6 A;  1SFO A;  1I3Q A;  2GAG C;  3GTG K;  5HL8 A;  1TWA C;  4GFQ A;  3GTQ K;  2XCO A;  2KWA A;  1X31 C;  2NVY A;  2KQ1 A;  5FJ8 K;  1XXC A;  2FQT A;  4A3G K;  3H3V D;  1HQM A;  4A3C C;  4KMA A;  5TJ3 A;  1DCO A;  3HOZ K;  1TWC C;  2XCQ A;  2E2I C;  3S17 C;  4AH6 A;  2R7Z A;  2O5I A;  2GAH C;  5C3E C;  2Y0S L;  3ADA C;  4A3L C;  1VGX A;  3HOY C;  4LR2 A;  4XLP A;  2WAQ D;  1WCM A;  1J6X A;  3RZD C;  2L5N A;  2WB1 L;  3H0G C;  3V4G A;  4AYB D;  5IOS A;  3GDZ A;  4M1X A;  4LJZ A;  3G4C A;  1WOO A;  4LK1 A;  1ZYR A;  4GTA A;  4XCH A;  4DDQ A;  2PA8 L;  1I3Q K;  1SFO K;  3OPF A;  2JA8 K;  4A3L K;  4BLB A;  4KAS A;  3S1Q C;  2R92 C;  3GEH A;  3H0G A;  1VH2 A;  2R93 K;  2NVY K;  2EBB A;  4GTD A;  4A3F C;  3GIR A;  3GTO K;  3BP8 C;  4OIR A;  3K7A K;  1O29 A;  4BY7 K;  1XPP A;  4C2M K;  4WJ3 M;  5JVO A;  3JST A;  1TWG C;  1EH1 A;  4KAT A;  1J6V A;  5FLM K;  4YFK A;  2R7Z C;  2YU9 A;  3S1Q K;  1WSV A;  5JVG S;  3S14 C;  3OEP A;  5C4J C;  3S17 K;  2E2H K;  3VA7 A;  2JA6 C;  3CQZ C;  4WCE S;  3AD7 C;  3GEE A;  1TWA A;  1JVI A;  1B4B A;  4BBS C;  2VUM C;  2NVX K;  4IO9 S;  5EGE A;  3S1R C;  4A3E K;  3RZO K;  2R92 K;  1FEU A;  4G7H A;  2R93 A;  1DCP A;  2R93 C;  4QJV A;  3GTP A;  3G4A A;  2D6F C;  4XSZ A;  3HOW K;  3CAG A;  4U67 S;  4BY7 C;  1DD5 A;  1PJ6 A;  3T00 A;  2E2H C;  4LK0 A;  3GTJ C;  4PAA A;  2JA6 K;  1ZVU A;  3GTL A;  1WCM K;  5FLM C;  3MML B;  2GSO A;  3N3Y A;  1YNJ A;  4BLA A;  1I50 K;  4QJV B;  4BXX C;  4FZB A;  4NOI A;  3DLL S;  1PJ5 A;  2V6U A;  2BE5 A;  3TTG A;  1TWF A;  4A3C K;  1BDF A;  2PHC B;  4A93 C;  3PO3 C;  1AB4 A;  1TWF C;  4C3J K;  4A3B K;  4RMF A;  4A3D C;  3LAJ A;  2PA8 D;  4KN7 A;  3FKI C;  2ZJQ S;  4KMU A;  4GTC A;  1F7U A;  4WFN S;  1WQG A;  4C3H C;  1EK8 A;  4AYB L;  3GTG A;  3S2D K;  1XZQ B;  5DM6 S;  4BBS K;  3LYW A;  4MEY A;  4OIO A;  4Y7N K;  1R9T A;  1Y1W A;  3GTJ K;  2A69 A;  4OIQ A;  1JQW A;  1WIH A;  3GTM C;  1TWH A;  2JA7 K;  3LPX A;  2CFA B;  2Y0S D;  3N0C A;  5JFE A;  3PIP S;  3AQP A;  3FKI A;  3NUH A;  5CHP A;  3QX3 A;  3HKZ L;  1HI9 A;  1O28 A;  3AH5 A;  5IP7 K;  4KB4 A;  4A3M K;  3HOZ C;  2GSU A;  5D4D A;  2PMZ L;  4WIL A;  3S0X A;  5IYC K;  1IL2 A;  4A93 K;  3HOX C;  3PO2 C;  3CQZ A;  4BKW A;  4OIP A;  1WQF A;  4WF9 S;  1V5V A;  3A8J A;  2W7V A;  3GTK C;  2JA5 A;  2ZUE A;  3IPJ A;  3H3V L;  3S15 C;  4YFN A;  1SFO C;  1IE0 A;  1F93 A;  4C3I K;  3GTM K;  1TWG K;  2P8T A;  4A3I K;  4Y7N C;  4KB2 A;  5M3M K;  5C44 K;  4A3K K;  4A3F K;  3S14 K;  4YG2 A;  4X6A C;  4GTF A;  3S1N C;  2VUM A;  4IOA S;  1Y1V K;  4G0U A;  1IBA A;  3HKZ D;  4LLG A;  2JA7 C;  5IYC C;  2XCR B;  1O2B A;  3HOX K;  2Y3P A;  5DM7 S;  3M3Y C;  5CJ9 A;  5C4J K;  4KN4 A;  2B63 K;  1XZQ A;  2RGR A;  1VJE A;  3WOD A;  4Q5S A;  1XXB A;  3GTK K;  5M5X K;  4GT9 A;  3S16 K;  2NVT K;  1USO A;  3S2H K;  2E2I K;  4BY1 K;  4P9S A;  1WOR A;  2PMZ D;  3GSI A;  2ZUF A;  4A3I C;  4OIN A;  1XZP B;  3I4M C;  1TWC A;  1YCL A;  2A68 A;  1J98 A;  4QIW D;  3HOY K;  4BXX K;  2NVY C;  3AQO A;  1K83 A;  3FKI K;  3HOV K;  2L3U A;  4WFB S;  4X6A K;  5M5Y K;  4C3J C;  3FHZ A;  2JA7 A;  4A3K C;  4P5B A;  4G0W A;  3GTJ A;  5HL7 S;  3LAP A;  1VRQ C;  1XXA A;  1K83 K;  2B63 C;  1WSR A;  1XZP A;  4KMD A;  5C4X C;  3ERE D;  5HQH A;  1UV7 A;  1WOP A;  2B63 A;  1O2A A;  3S16 C;  3ORE A;  3T01 A;  3Q3Q A;  4C45 A;  4G7Z A;  2JA8 C;  1SMY A;  1F9N A;  4KDD A;  4A3B C;  2E2I A;  4WJ4 A;  4IOC S;  1BGW A;  1O26 A;  3PO3 K;  3GTK A;  1TWF K;  3BUE A;  1L0W A;  4A3J C;  2NVX C;  2VUM K;  5IYD C;  2E2J C;  1K83 C;  5IP9 C;  3BP3 A;  3I4M K;  1EQR A;  1I6H K;  1YX2 A;  4XLN A;  4WFA S;  2NVT C;  4GTL A;  1ZQ1 C;  4LOW A;  4BY1 C;  3GEI A;  4J3N A;  3CF5 S;  5IOR A;  2A6H A;  4Q4Z A;  2ZJR S;  2V6T A;  5IYB C;  4XSX A;  1Y1V A;  4MEX A;  1TWG A;  5TMC A;  3SZY A;  2CW0 A;  4KAW X;  1EFW A;  3DXJ A;  2RH6 A;  4GTE A;  4P5A A;  5E68 A;  2GSN A;  2JA5 K;  1I6H C;  3GTO C;  3N0B A;  2NVQ K;  3GTP K;  4KC6 A;  4C2M C;  4A3J K;  4A3M C;  3S15 K;  1O2F B;  1BJT A;  1R9T C;  2R92 A;  3I4N K;  5IP7 C;  2KXY A;  1INN A;  3GTM A;  2CFA A;  2WB1 D;  3GTG C;  1WQH A;  5IOT A;  3FOF A;  4MQ9 A;  5L46 A; 
#chains in the Genus database with same CATH homology
 3HKZ D;  5C4X K;  4LLG A;  2JA7 C;  4A93 K;  2A6E A;  2E2J K;  5IYD K;  5IYC C;  4BY7 C;  3HOX K;  4Y52 K;  2E2H C;  5IP9 K;  3H0G K;  4BBR K;  4LK0 A;  3GTJ C;  3M3Y C;  4C3I C;  3CQZ K;  5C4J K;  4KN4 A;  2B63 K;  2JA6 K;  4GZY A;  3HOU K;  1Y1V C;  1I6V A;  1YNN A;  1WCM K;  3GTG K;  3S1N K;  4A3C K;  1TWA C;  3WOD A;  5FLM C;  4Q5S A;  3GTQ C;  5M3F K;  1TWH K;  3GTQ K;  3GTK K;  5M5X K;  1R9T K;  5C3E K;  3S16 K;  2WAQ L;  2NVT K;  1YNJ A;  4A3G K;  3S2H K;  1I50 K;  5FJ8 K;  2E2I K;  4BY1 K;  4QJV B;  4BXX C;  2PMZ D;  4NOI A;  2JA5 C;  2BE5 A;  5TMF A;  3S1M K;  4A3I C;  4OIN A;  3H3V D;  1HQM A;  3GTL C;  3I4M C;  1BDF A;  4A3C C;  2O5J A;  4A93 C;  2PPB A;  3PO3 C;  1TWC K;  1TWC C;  3HOZ K;  3RZD K;  1TWF C;  4C3J K;  4A3B K;  2A68 A;  1I50 C;  2E2I C;  3S17 C;  2O5I A;  3S2D C;  5C3E C;  4QIW D;  2Y0S L;  3HOY K;  4A3D C;  4BXX K;  1Y1W K;  2NVY C;  4A3L C;  2PA8 D;  4KN7 A;  3S2H C;  3FKI C;  3FKI K;  4C3H K;  4KMU A;  3HOV K;  4X6A K;  3HOY C;  1I3Q C;  5M5Y K;  4XLP A;  2WAQ D;  4C3H C;  4C3J C;  4A3K C;  4AYB L;  3S2D K;  3RZD C;  2WB1 L;  3M3Y K;  3PO2 K;  4BBS K;  3H0G C;  4AYB D;  1K83 K;  4MEY A;  4OIO A;  2B63 C;  4YFX A;  4LJZ A;  4Y7N K;  3M4O K;  4LK1 A;  1ZYR A;  2A69 A;  4OIQ A;  3K7A C;  3GTJ K;  3GTM C;  2JA7 K;  2PA8 L;  1I3Q K;  1SFO K;  3HOV C;  2Y0S D;  5C4X C;  4QIW L;  2JA8 K;  4A3L K;  3S16 C;  3S1Q C;  2R92 C;  3HKZ L;  1TWH C;  4G7Z A;  2JA8 C;  2R93 K;  1SMY A;  2R7Z K;  2NVY K;  1Y1W C;  4A3B C;  3HOU C;  5IP7 K;  4A3M K;  3HOZ C;  3PO3 K;  5D4D A;  4A3E C;  4A3F C;  2PMZ L;  1TWF K;  4OIR A;  3S1M C;  3K7A K;  3S1R K;  3GTO K;  5IYC K;  4BY7 K;  4A3J C;  2NVX C;  1XPP A;  5IYD C;  2E2J C;  1K83 C;  3M4O C;  4C2M K;  5IP9 C;  4BBR C;  2VUM K;  3GTL K;  2YU9 C;  3HOX C;  3I4M K;  1I6H K;  3PO2 C;  4XLN A;  2NVT C;  1TWG C;  4BY1 C;  3HOW C;  4OIP A;  5FLM K;  2A6H A;  4YFK A;  2R7Z C;  4ZH4 A;  4Q4Z A;  3GTK C;  3S1Q K;  3S14 C;  5IYB C;  4XSX A;  5IYB K;  1TWA K;  3H3V L;  4MEX A;  3S15 C;  5C4J C;  5TMC A;  4YFN A;  2CW0 A;  5C44 C;  3RZO C;  3HOW K;  1SFO C;  3S17 K;  2E2H K;  2JA6 C;  3CQZ C;  4G7O A;  4C3I K;  1IW7 A;  3DXJ A;  1TWG K;  3GTM K;  4Y52 C;  4A3G C;  4A3I K;  4Y7N C;  5M3M K;  2NVQ K;  2JA5 K;  1I6H C;  3GTO C;  2YU9 K;  3GTP K;  4BBS C;  3EQL A;  5C44 K;  4C2M C;  2VUM C;  4A3M C;  4A3J K;  2NVX K;  3S15 K;  4A3K K;  4JK1 A;  3S1R C;  4A3E K;  4A3F K;  3S14 K;  1R9T C;  3RZO K;  3I4N K;  3I4N C;  4YG2 A;  5IP7 C;  2R92 K;  4X6A C;  4G7H A;  2R93 C;  2WB1 D;  1WCM C;  3GTG C;  3S1N C;  4A3D K;  3GTP C;  4QJV A;  4MQ9 A;  1Y1V K;  2NVQ C;  5M5W K;  4XSZ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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