5C44C

Crystal structure of a transcribing rna polymerase ii complex reveals a complete transcription bubble
Total Genus 50
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
50
sequence length
265
structure length
265
Chain Sequence
b'EGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Crystal Structure of a Transcribing RNA Polymerase II Complex Reveals a Complete Transcription Bubble.
pubmed doi rcsb
source organism Saccharomyces cerevisiae (strain atcc 204508 / s288c)
molecule tags Transferase/dna/rna
total genus 50
structure length 265
sequence length 265
ec nomenclature
pdb deposition date 2015-06-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 5c44C02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 5c44C01
5C44C 3PO3K 4A93K 4C3IK 4QIWD 2PA8L 5M5YK 2R93C 4A3EC 4BXXC 4MEXA 3HOZC 1R9TC 4Y7NK 5IP7C 2A68A 4A3KC 3GTOK 3S2HK 3PO3C 4A93C 4C3IC 2JA8C 1I3QC 4G7HA 4Y7NC 2PPBA 3HOWK 4MQ9A 2B63K 3S1RK 2BE5A 3K7AK 3I4NC 5IP9K 3S2HC 4G7OA 4BBRK 1TWFK 2JA7K 5IYDK 1I6HC 5C4XK 4YG2A 1TWCK 5M5XK 5M3MK 2B63C 3S1RC 3K7AC 4C3JC 5IYDC 2WB1L 5IYCK 4BY7K 1TWFC 2JA7C 1BDFA 2VUMK 4MEYA 1TWCC 4LLGA 4X6AK 3HOZK 3S2DK 1R9TK 1YNJA 4Y52K 3WODA 4G7ZA 5IYCC 4A3KK 4OIPA 1HQMA 4BY7C 2VUMC 2JA8K 2Y0SD 4X6AC 3HKZL 1I3QK 3GTKC 3S2DC 2JA5K 4NOIA 4Y52C 3M4OC 2O5IA 2CW0A 3M3YC 2R7ZK 4YFNA 4Q5SA 3I4NK 3S17K 3EQLA 2PMZL 3S1QK 4A3DK 4OINA 1Y1WC 2YU9K 1I6HK 4A3BK 2JA5C 2PA8D 2R7ZC 4OIQA 3S17C 3S1QC 1K83K 4QIWL 4C3JK 1SFOK 3GTMK 4A3JC 3S15C 4A3DC 1I50K 3HOYK 2YU9C 4AYBD 5M3FK 4A3BC 2E2HK 2E2IC 3GTQC 1K83C 4YFXA 1SFOC 2NVTK 1YNNA 1ZYRA 3GTMC 1I50C 3HOYC 1TWGK 3FKIK 4QJVB 5FJ8K 4A3IK 2E2JK 3S16K 4C3HC 2E2HC 3GTKK 3S1MC 5C4JK 5TMCA 2NVYK 3GTPK 3M4OK 3H3VL 3M3YK 4BY1K 2NVTC 1TWGC 3FKIC 4KN4A 4LJZA 2E2JC 4A3IC 3S16C 4A3GC 2O5JA 3PO2K 1Y1WK 2WB1D 2NVXK 4XSXA 3GTGC 4JK1A 5C4JC 1WCMK 2NVYC 3GTPC 4BY1C 2A69A 4LK0A 4A3JK 3S15K 3PO2C 4C2MK 5D4DA 2NVXC 1WCMC 2WAQD 3RZDC 2E2IK 3H0GK 3GTQK 2R92K 2NVQC 3I4MK 4A3LC 2Y0SL 4XSZA 5FLMK 3DXJA 2JA6C 3S1NK 4C2MC 1TWAK 4BBSK 4C3HK 3S1MK 3H0GC 2R92C 4ZH4A 3I4MC 4OIOA 3GTJK 5FLMC 3S1NC 1Y1VK 4A3GK 4A3MK 1TWAC 4BBSC 4A3FK 5TMFA 1TWHK 2A6HA 3GTGK 1I6VA 3HOVK 4GZYA 4LK1A 3GTJC 4AYBL 1Y1VC 4OIRA 3CQZK 4A3MC 1XPPA 5M5WK 4A3FC 3HOXK 1TWHC 4KMUA 4QJVA 4KN7A 3RZDK 3HOVC 5IYBK 3RZOK 1SMYA 2NVQK 3GTOC 4A3LK 3CQZC 3HOUK 2JA6K 3GTLK 3H3VD 4A3CK 3HOXC 4XLPA 4Q4ZA 5IYBC 3RZOC 3HKZD 3HOWC 3S14K 4BBRC 5IP9C 3HOUC 5C3EK 3GTLC 4A3CC 5C44K 5C4XC 2PMZD 2R93K 4A3EK 4BXXK 2A6EA 5IP7K 1IW7A 3S14C 4XLNA 5C3EC 4YFKA 2WAQL
chains in the Genus database with same CATH superfamily
2V6TA 1AB4A 5M5YK 2ZFZA 3GTOA 3GTOK 4GTAA 1DD5A 3PO3C 5E68A 2PPBA 3BUEA 3HOWK 4MQ9A 1PJ6A 3I4NC 3GTLA 3S2HC 1WQFA 3QX3A 1TWCA 5C4XK 1TWCK 3S1RC 3K7AC 4C3JC 5IYDC 5IYCK 2JA7C 5IOQA 1BJTA 4X6AK 3HOZK 4BKWA 1YNJA 4A3KK 4BY7C 4KATA 4KMHA 4GTFA 4NOIA 4Y52C 1O2FB 2GSUA 3S17K 4YFNA 4Q5SA 2XCQA 2KWAA 2PMZL 1FEUA 2XCOA 4BLBA 4A3JC 4A3BC 2E2HA 2E2HK 2E2IC 1HI9A 3AD9C 5DM6S 5EGEA 1YNNA 1ZYRA 3HOYC 1TWGK 2E2JK 2VUMA 3GTPK 3M4OK 3H3VL 4ILDA 4KN4A 4WF9S 3PIPS 1Y1WA 1Y1WK 2JA5A 1WCMK 4P5BA 4KARA 2R7ZA 5DM7S 4LK0A 2FQTA 3CAGA 3AD7C 1SFOA 2NVQC 3GTMA 3MMLB 4C2MC 1DCPA 4C3HK 4LOWA 4A3GK 4BBSC 4A3FK 1TWHK 1VGXA 1UV7A 1WOPA 3GTJC 1Y1VC 4A3MC 1XPPA 5M5WK 2NVXA 4KMUA 4LQYA 1VLOA 5IYBK 1JVIA 3CQZC 4DDQA 4G0UA 1O29A 3H3VD 3HOXC 4XLPA 3LPXA 4BBRC 3HOUC 3S0XA 1O27A 3S14C 1J6XA 5C3EC 2WAQL 3PO3K 2R93C 4BXXC 1R9TC 4GTDA 4GT9A 3S2HK 1USMA 2JA8C 2GSNA 4G7HA 4KAWX 3S1RK 5HL7S 2CFAB 3K7AK 5IYDK 2JA7A 4G7OA 2V6SA 2JA7K 1EI6A 1VRQC 1C0AA 1WQGA 5M3MK 2B63C 4BY7K 3A8IA 3SZZA 4MEYA 1YX2A 3BP3A 1F7UA 4Y52K 3WODA 2PHCB 2RGRA 2Y0SD 3HKZL 1I3QA 1I3QK 3ERED 4FZBA 4P9SA 4IO9S 1BGWA 1EQRA 1I6HK 4A3BK 1VJEA 3S1QC 4QIWL 3HOYK 4A3DC 3NUHA 2YU9C 3FOEA 4PABA 5L46A 1XXCA 1G51A 1K83C 3GDZA 4QJVB 1I50C 2W7VA 1WORA 3GTKA 3GTKK 3M3YK 2NVTC 3FKIC 4A3IC 1ZVUA 2GAGC 4XSXA 3GTGC 4GTBA 3T00A 5C4JC 2NVYC 1PJ7A 4BY1C 3S15K 3JSTA 3PO2C 4C2MK 5D4DA 3GIRA 1WSRA 3RZDC 1ISEA 3GTQA 3GTQK 3AQPA 4A3LC 4XSZA 3DXJA 1DCOA 4BBSK 2RH6A 3SZYA 3S1MK 3H0GC 2R92C 3I4MC 4OIOA 1TWGA 5FLMC 3GTJK 1Y1VK 3A8JA 4A3MK 1TWAC 1O25A 1JQWA 3GTPA 4LK1A 4AYBL 3FOFA 4OIRA 3CQZK 3HOXK 1WCMA 4QJVA 4KN7A 1XXBA 3FHZA 1F7VA 3GTOC 4KMDA 4KMAA 2JA6A 3HOUK 2JA6K 3LAJA 4LR2A 4Q4ZA 1L0WA 3HOWC 3S14K 1IBAA 5C3EK 3GTLC 4A3CC 5HL8A 4KDDA 5C4XC 2R93A 2PMZD 2R93K 1BS2A 2A6EA 5JFEA 4BXXK 1IW7A 4WFAS 3AH5A 4GTCA 3LYWA 1EH1A 5C44C 4GFQA 1TWHA 4PAAA 2PA8L 3HOZC 2JH3A 3AD8C 3OEPA 4A3KC 4A93C 1YCLA 4C3IC 1ZQ1C 1O28A 3GEHA 4Y7NC 3T02A 2B63K 2BE5A 3GEEA 5IP9K 2KQ1A 4YG2A 3G4CA 4WILA 5M5XK 3Q3QA 3N0BA 2ZUFA 2WB1L 1TWFC 3OPFA 4BLAA 4G7ZA 1HQMA 3T01A 3VA7A 2ZUEA 2VUMC 4O2DA 3L4JA 2D6FC 5JVHS 3S2DC 4RMFA 1B4BA 3M4OC 2O5IA 2CW0A 3I4NK 3S1QK 1XZQB 3EQLA 4KM9A 4A3DK 1XXAA 2YU9A 1Y1WC 3IPJA 2YU9K 2JA5C 1WSVA 2PA8D 2R7ZC 4OIQA 1K83K 4J3NA 4C3JK 1I50K 2Y3PA 4YFXA 1SFOC 2NVTK 3GTMC 1VH2A 3FKIK 4A3IK 5CJ9A 4WJ3M 1KQ4A 1USOA 4C3HC 2NVYA 5C4JK 2NVYK 2FQOA 4BY1K 3CF5S 3S16C 4A3GC 2O5JA 4KB4A 3PO2K 2WB1D 4M1XA 4A3JK 2NVXC 3LAPA 2WAQD 4FM9A 2E2IA 2E2IK 3H0GK 2R92K 3I4MK 5FLMK 2KPUA 1TWAA 1TWAK 1WOSA 1XZQA 2ZJPS 4KASA 3S1NC 2CFAA 4GZYA 1X31C 1EK8A 5TJ3A 1PJ5A 3HOVC 1SMYA 2NVQK 3GTLK 5IOTA 4A3CK 1F93A 3RZOC 3HKZD 3TFHA 5C44K 1RU0A 1WIHA 3V4GA 2L5NA 1INNA 4G0VA 3GTJA 1Y1VA 4YFKA 4A93K 4C3IK 4QIWD 4A3EC 4MEXA 4Y7NK 1J6VA 5IP7C 3HXAA 3TFIA 2A68A 2KXYA 3BP8C 3CQZA 3TFJA 1I3QC 1DCHA 4GTEA 1O26A 1IL2A 3N3YA 4BBRK 1GE9A 1TWFA 1TWFK 1I6HC 3N0CA 1IS1A 4KB2A 1BDFA 2VUMK 3G4AA 1TWCC 4LLGA 3A8KA 5IORA 3L4KA 1R9TA 3S2DK 1R9TK 5IYCC 4OIPA 2JA8K 4X6AC 3ADAC 3GTKC 2JA5K 3M3YC 2R7ZK 4WCES 4OINA 1V5VA 2P5MA 4XCHA 2B63A 3S17C 4WFNS 5HQHA 2GAHC 4U67S 1SFOK 3GTMK 3S15C 1O24A 5M3FK 4AYBD 1F9NA 4WJ4A 3GTQC 4IOAS 4IOCS 1XZPB 2P8TA 5FJ8K 3S16K 3DLLS 2E2HC 1J6WA 3S1MC 2XCRB 4C45A 5TMCA 1WOOA 4WFBS 5EGHA 1TWGC 3GSIA 4LJZA 2E2JC 4KM8A 2GSOA 1ZBSA 2NVXK 4JK1A 1WQHA 3GTPC 1JOEA 2A69A 1WCMC 5JVGS 4P5AA 4G0WA 1B4AA 1K83A 2ZJQS 2Y0SL 1I50A 3S1NK 1ZXOA 2JA6C 3PIOS 4ZH4A 3FKIA 5IOSA 2V6UA 2L3UA 3TTGA 5TMFA 3GTGA 2A6HA 3GTGK 1I6VA 3HOVK 4KC6A 4A3FC 3OREA 1TWHC 1XZPA 3RZDK 3RZOK 3AQOA 4A3LK 1J98A 2EBBA 5IYBC 3H0GA 2R92A 5IP9C 1IE0A 4GTLA 1IQ0A 3GEIA 4AH6A 1O2BA 1O2AA 4A3EK 5IP7K 2ZJRS 5JVOA 4XLNA 5CHPA 1EFWA
chains in the Genus database with same CATH topology
5C44C 3PO3K 4A93K 4C3IK 4QIWD 2PA8L 5M5YK 2R93C 4A3EC 4BXXC 4MEXA 3HOZC 1R9TC 4Y7NK 5IP7C 2A68A 4A3KC 3GTOK 3S2HK 3PO3C 4A93C 4C3IC 2JA8C 1I3QC 4G7HA 4Y7NC 2PPBA 3HOWK 4MQ9A 2B63K 3S1RK 2BE5A 3K7AK 3I4NC 5IP9K 3S2HC 4G7OA 4BBRK 1TWFK 2JA7K 5IYDK 1I6HC 5C4XK 4YG2A 1TWCK 5M5XK 5M3MK 2B63C 3S1RC 3K7AC 4C3JC 5IYDC 2WB1L 5IYCK 4BY7K 1TWFC 2JA7C 1BDFA 2VUMK 4MEYA 1TWCC 4LLGA 4X6AK 3HOZK 3S2DK 1R9TK 1YNJA 4Y52K 3WODA 4G7ZA 5IYCC 4A3KK 4OIPA 1HQMA 4BY7C 2VUMC 2JA8K 2Y0SD 4X6AC 3HKZL 1I3QK 3GTKC 3S2DC 2JA5K 4NOIA 4Y52C 3M4OC 2O5IA 2CW0A 3M3YC 2R7ZK 4YFNA 4Q5SA 3I4NK 3S17K 3EQLA 2PMZL 3S1QK 4A3DK 4OINA 1Y1WC 2YU9K 1I6HK 4A3BK 2JA5C 2PA8D 2R7ZC 4OIQA 3S17C 3S1QC 1K83K 4QIWL 4C3JK 1SFOK 3GTMK 4A3JC 3S15C 4A3DC 1I50K 3HOYK 2YU9C 4AYBD 5M3FK 4A3BC 2E2HK 2E2IC 3GTQC 1K83C 4YFXA 1SFOC 2NVTK 1YNNA 1ZYRA 3GTMC 1I50C 3HOYC 1TWGK 3FKIK 4QJVB 5FJ8K 4A3IK 2E2JK 3S16K 4C3HC 2E2HC 3GTKK 3S1MC 5C4JK 5TMCA 2NVYK 3GTPK 3M4OK 3H3VL 3M3YK 4BY1K 2NVTC 1TWGC 3FKIC 4KN4A 4LJZA 2E2JC 4A3IC 3S16C 4A3GC 2O5JA 3PO2K 1Y1WK 2WB1D 2NVXK 4XSXA 3GTGC 4JK1A 5C4JC 1WCMK 2NVYC 3GTPC 4BY1C 2A69A 4LK0A 4A3JK 3S15K 3PO2C 4C2MK 5D4DA 2NVXC 1WCMC 2WAQD 3RZDC 2E2IK 3H0GK 3GTQK 2R92K 2NVQC 3I4MK 4A3LC 2Y0SL 4XSZA 5FLMK 3DXJA 2JA6C 3S1NK 4C2MC 1TWAK 4BBSK 4C3HK 3S1MK 3H0GC 2R92C 4ZH4A 3I4MC 4OIOA 3GTJK 5FLMC 3S1NC 1Y1VK 4A3GK 4A3MK 1TWAC 4BBSC 4A3FK 5TMFA 1TWHK 2A6HA 3GTGK 1I6VA 3HOVK 4GZYA 4LK1A 3GTJC 4AYBL 1Y1VC 4OIRA 3CQZK 4A3MC 1XPPA 5M5WK 4A3FC 3HOXK 1TWHC 4KMUA 4QJVA 4KN7A 3RZDK 3HOVC 5IYBK 3RZOK 1SMYA 2NVQK 3GTOC 4A3LK 3CQZC 3HOUK 2JA6K 3GTLK 3H3VD 4A3CK 3HOXC 4XLPA 4Q4ZA 5IYBC 3RZOC 3HKZD 3HOWC 3S14K 4BBRC 5IP9C 3HOUC 5C3EK 3GTLC 4A3CC 5C44K 5C4XC 2PMZD 2R93K 4A3EK 4BXXK 2A6EA 5IP7K 1IW7A 3S14C 4XLNA 5C3EC 4YFKA 2WAQL
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5C44 C;  3PO3 K;  4A93 K;  4C3I K;  4QIW D;  2PA8 L;  5M5Y K;  2R93 C;  4A3E C;  4BXX C;  4MEX A;  3HOZ C;  1R9T C;  4Y7N K;  5IP7 C;  2A68 A;  4A3K C;  3GTO K;  3S2H K;  3PO3 C;  4A93 C;  4C3I C;  2JA8 C;  1I3Q C;  4G7H A;  4Y7N C;  2PPB A;  3HOW K;  4MQ9 A;  2B63 K;  3S1R K;  2BE5 A;  3K7A K;  3I4N C;  5IP9 K;  3S2H C;  4G7O A;  4BBR K;  1TWF K;  2JA7 K;  5IYD K;  1I6H C;  5C4X K;  4YG2 A;  1TWC K;  5M5X K;  5M3M K;  2B63 C;  3S1R C;  3K7A C;  4C3J C;  5IYD C;  2WB1 L;  5IYC K;  4BY7 K;  1TWF C;  2JA7 C;  1BDF A;  2VUM K;  4MEY A;  1TWC C;  4LLG A;  4X6A K;  3HOZ K;  3S2D K;  1R9T K;  1YNJ A;  4Y52 K;  3WOD A;  4G7Z A;  5IYC C;  4A3K K;  4OIP A;  1HQM A;  4BY7 C;  2VUM C;  2JA8 K;  2Y0S D;  4X6A C;  3HKZ L;  1I3Q K;  3GTK C;  3S2D C;  2JA5 K;  4NOI A;  4Y52 C;  3M4O C;  2O5I A;  2CW0 A;  3M3Y C;  2R7Z K;  4YFN A;  4Q5S A;  3I4N K;  3S17 K;  3EQL A;  2PMZ L;  3S1Q K;  4A3D K;  4OIN A;  1Y1W C;  2YU9 K;  1I6H K;  4A3B K;  2JA5 C;  2PA8 D;  2R7Z C;  4OIQ A;  3S17 C;  3S1Q C;  1K83 K;  4QIW L;  4C3J K;  1SFO K;  3GTM K;  4A3J C;  3S15 C;  4A3D C;  1I50 K;  3HOY K;  2YU9 C;  4AYB D;  5M3F K;  4A3B C;  2E2H K;  2E2I C;  3GTQ C;  1K83 C;  4YFX A;  1SFO C;  2NVT K;  1YNN A;  1ZYR A;  3GTM C;  1I50 C;  3HOY C;  1TWG K;  3FKI K;  4QJV B;  5FJ8 K;  4A3I K;  2E2J K;  3S16 K;  4C3H C;  2E2H C;  3GTK K;  3S1M C;  5C4J K;  5TMC A;  2NVY K;  3GTP K;  3M4O K;  3H3V L;  3M3Y K;  4BY1 K;  2NVT C;  1TWG C;  3FKI C;  4KN4 A;  4LJZ A;  2E2J C;  4A3I C;  3S16 C;  4A3G C;  2O5J A;  3PO2 K;  1Y1W K;  2WB1 D;  2NVX K;  4XSX A;  3GTG C;  4JK1 A;  5C4J C;  1WCM K;  2NVY C;  3GTP C;  4BY1 C;  2A69 A;  4LK0 A;  4A3J K;  3S15 K;  3PO2 C;  4C2M K;  5D4D A;  2NVX C;  1WCM C;  2WAQ D;  3RZD C;  2E2I K;  3H0G K;  3GTQ K;  2R92 K;  2NVQ C;  3I4M K;  4A3L C;  2Y0S L;  4XSZ A;  5FLM K;  3DXJ A;  2JA6 C;  3S1N K;  4C2M C;  1TWA K;  4BBS K;  4C3H K;  3S1M K;  3H0G C;  2R92 C;  4ZH4 A;  3I4M C;  4OIO A;  3GTJ K;  5FLM C;  3S1N C;  1Y1V K;  4A3G K;  4A3M K;  1TWA C;  4BBS C;  4A3F K;  5TMF A;  1TWH K;  2A6H A;  3GTG K;  1I6V A;  3HOV K;  4GZY A;  4LK1 A;  3GTJ C;  4AYB L;  1Y1V C;  4OIR A;  3CQZ K;  4A3M C;  1XPP A;  5M5W K;  4A3F C;  3HOX K;  1TWH C;  4KMU A;  4QJV A;  4KN7 A;  3RZD K;  3HOV C;  5IYB K;  3RZO K;  1SMY A;  2NVQ K;  3GTO C;  4A3L K;  3CQZ C;  3HOU K;  2JA6 K;  3GTL K;  3H3V D;  4A3C K;  3HOX C;  4XLP A;  4Q4Z A;  5IYB C;  3RZO C;  3HKZ D;  3HOW C;  3S14 K;  4BBR C;  5IP9 C;  3HOU C;  5C3E K;  3GTL C;  4A3C C;  5C44 K;  5C4X C;  2PMZ D;  2R93 K;  4A3E K;  4BXX K;  2A6E A;  5IP7 K;  1IW7 A;  3S14 C;  4XLN A;  5C3E C;  4YFK A;  2WAQ L; 
#chains in the Genus database with same CATH topology
 2V6T A;  1AB4 A;  5M5Y K;  2ZFZ A;  3GTO A;  3GTO K;  4GTA A;  1DD5 A;  3PO3 C;  5E68 A;  2PPB A;  3BUE A;  3HOW K;  4MQ9 A;  1PJ6 A;  3I4N C;  3GTL A;  3S2H C;  1WQF A;  3QX3 A;  1TWC A;  5C4X K;  1TWC K;  3S1R C;  3K7A C;  4C3J C;  5IYD C;  5IYC K;  2JA7 C;  5IOQ A;  1BJT A;  4X6A K;  3HOZ K;  4BKW A;  1YNJ A;  4A3K K;  4BY7 C;  4KAT A;  4KMH A;  4GTF A;  4NOI A;  4Y52 C;  1O2F B;  2GSU A;  3S17 K;  4YFN A;  4Q5S A;  2XCQ A;  2KWA A;  2PMZ L;  1FEU A;  2XCO A;  4BLB A;  4A3J C;  4A3B C;  2E2H A;  2E2H K;  2E2I C;  1HI9 A;  3AD9 C;  5DM6 S;  5EGE A;  1YNN A;  1ZYR A;  3HOY C;  1TWG K;  2E2J K;  2VUM A;  3GTP K;  3M4O K;  3H3V L;  4ILD A;  4KN4 A;  4WF9 S;  3PIP S;  1Y1W A;  1Y1W K;  2JA5 A;  1WCM K;  4P5B A;  4KAR A;  2R7Z A;  5DM7 S;  4LK0 A;  2FQT A;  3CAG A;  3AD7 C;  1SFO A;  2NVQ C;  3GTM A;  3MML B;  4C2M C;  1DCP A;  4C3H K;  4LOW A;  4A3G K;  4BBS C;  4A3F K;  1TWH K;  1VGX A;  1UV7 A;  1WOP A;  3GTJ C;  1Y1V C;  4A3M C;  1XPP A;  5M5W K;  2NVX A;  4KMU A;  4LQY A;  1VLO A;  5IYB K;  1JVI A;  3CQZ C;  4DDQ A;  4G0U A;  1O29 A;  3H3V D;  3HOX C;  4XLP A;  3LPX A;  4BBR C;  3HOU C;  3S0X A;  1O27 A;  3S14 C;  1J6X A;  5C3E C;  2WAQ L;  3PO3 K;  2R93 C;  4BXX C;  1R9T C;  4GTD A;  4GT9 A;  3S2H K;  1USM A;  2JA8 C;  2GSN A;  4G7H A;  4KAW X;  3S1R K;  5HL7 S;  2CFA B;  3K7A K;  5IYD K;  2JA7 A;  4G7O A;  2V6S A;  2JA7 K;  1EI6 A;  1VRQ C;  1C0A A;  1WQG A;  5M3M K;  2B63 C;  4BY7 K;  3A8I A;  3SZZ A;  4MEY A;  1YX2 A;  3BP3 A;  1F7U A;  4Y52 K;  3WOD A;  2PHC B;  2RGR A;  2Y0S D;  3HKZ L;  1I3Q A;  1I3Q K;  3ERE D;  4FZB A;  4P9S A;  4IO9 S;  1BGW A;  1EQR A;  1I6H K;  4A3B K;  1VJE A;  3S1Q C;  4QIW L;  3HOY K;  4A3D C;  3NUH A;  2YU9 C;  3FOE A;  4PAB A;  5L46 A;  1XXC A;  1G51 A;  1K83 C;  3GDZ A;  4QJV B;  1I50 C;  2W7V A;  1WOR A;  3GTK A;  3GTK K;  3M3Y K;  2NVT C;  3FKI C;  4A3I C;  1ZVU A;  2GAG C;  4XSX A;  3GTG C;  4GTB A;  3T00 A;  5C4J C;  2NVY C;  1PJ7 A;  4BY1 C;  3S15 K;  3JST A;  3PO2 C;  4C2M K;  5D4D A;  3GIR A;  1WSR A;  3RZD C;  1ISE A;  3GTQ A;  3GTQ K;  3AQP A;  4A3L C;  4XSZ A;  3DXJ A;  1DCO A;  4BBS K;  2RH6 A;  3SZY A;  3S1M K;  3H0G C;  2R92 C;  3I4M C;  4OIO A;  1TWG A;  5FLM C;  3GTJ K;  1Y1V K;  3A8J A;  4A3M K;  1TWA C;  1O25 A;  1JQW A;  3GTP A;  4LK1 A;  4AYB L;  3FOF A;  4OIR A;  3CQZ K;  3HOX K;  1WCM A;  4QJV A;  4KN7 A;  1XXB A;  3FHZ A;  1F7V A;  3GTO C;  4KMD A;  4KMA A;  2JA6 A;  3HOU K;  2JA6 K;  3LAJ A;  4LR2 A;  4Q4Z A;  1L0W A;  3HOW C;  3S14 K;  1IBA A;  5C3E K;  3GTL C;  4A3C C;  5HL8 A;  4KDD A;  5C4X C;  2R93 A;  2PMZ D;  2R93 K;  1BS2 A;  2A6E A;  5JFE A;  4BXX K;  1IW7 A;  4WFA S;  3AH5 A;  4GTC A;  3LYW A;  1EH1 A;  5C44 C;  4GFQ A;  1TWH A;  4PAA A;  2PA8 L;  3HOZ C;  2JH3 A;  3AD8 C;  3OEP A;  4A3K C;  4A93 C;  1YCL A;  4C3I C;  1ZQ1 C;  1O28 A;  3GEH A;  4Y7N C;  3T02 A;  2B63 K;  2BE5 A;  3GEE A;  5IP9 K;  2KQ1 A;  4YG2 A;  3G4C A;  4WIL A;  5M5X K;  3Q3Q A;  3N0B A;  2ZUF A;  2WB1 L;  1TWF C;  3OPF A;  4BLA A;  4G7Z A;  1HQM A;  3T01 A;  3VA7 A;  2ZUE A;  2VUM C;  4O2D A;  3L4J A;  2D6F C;  5JVH S;  3S2D C;  4RMF A;  1B4B A;  3M4O C;  2O5I A;  2CW0 A;  3I4N K;  3S1Q K;  1XZQ B;  3EQL A;  4KM9 A;  4A3D K;  1XXA A;  2YU9 A;  1Y1W C;  3IPJ A;  2YU9 K;  2JA5 C;  1WSV A;  2PA8 D;  2R7Z C;  4OIQ A;  1K83 K;  4J3N A;  4C3J K;  1I50 K;  2Y3P A;  4YFX A;  1SFO C;  2NVT K;  3GTM C;  1VH2 A;  3FKI K;  4A3I K;  5CJ9 A;  4WJ3 M;  1KQ4 A;  1USO A;  4C3H C;  2NVY A;  5C4J K;  2NVY K;  2FQO A;  4BY1 K;  3CF5 S;  3S16 C;  4A3G C;  2O5J A;  4KB4 A;  3PO2 K;  2WB1 D;  4M1X A;  4A3J K;  2NVX C;  3LAP A;  2WAQ D;  4FM9 A;  2E2I A;  2E2I K;  3H0G K;  2R92 K;  3I4M K;  5FLM K;  2KPU A;  1TWA A;  1TWA K;  1WOS A;  1XZQ A;  2ZJP S;  4KAS A;  3S1N C;  2CFA A;  4GZY A;  1X31 C;  1EK8 A;  5TJ3 A;  1PJ5 A;  3HOV C;  1SMY A;  2NVQ K;  3GTL K;  5IOT A;  4A3C K;  1F93 A;  3RZO C;  3HKZ D;  3TFH A;  5C44 K;  1RU0 A;  1WIH A;  3V4G A;  2L5N A;  1INN A;  4G0V A;  3GTJ A;  1Y1V A;  4YFK A;  4A93 K;  4C3I K;  4QIW D;  4A3E C;  4MEX A;  4Y7N K;  1J6V A;  5IP7 C;  3HXA A;  3TFI A;  2A68 A;  2KXY A;  3BP8 C;  3CQZ A;  3TFJ A;  1I3Q C;  1DCH A;  4GTE A;  1O26 A;  1IL2 A;  3N3Y A;  4BBR K;  1GE9 A;  1TWF A;  1TWF K;  1I6H C;  3N0C A;  1IS1 A;  4KB2 A;  1BDF A;  2VUM K;  3G4A A;  1TWC C;  4LLG A;  3A8K A;  5IOR A;  3L4K A;  1R9T A;  3S2D K;  1R9T K;  5IYC C;  4OIP A;  2JA8 K;  4X6A C;  3ADA C;  3GTK C;  2JA5 K;  3M3Y C;  2R7Z K;  4WCE S;  4OIN A;  1V5V A;  2P5M A;  4XCH A;  2B63 A;  3S17 C;  4WFN S;  5HQH A;  2GAH C;  4U67 S;  1SFO K;  3GTM K;  3S15 C;  1O24 A;  5M3F K;  4AYB D;  1F9N A;  4WJ4 A;  3GTQ C;  4IOA S;  4IOC S;  1XZP B;  2P8T A;  5FJ8 K;  3S16 K;  3DLL S;  2E2H C;  1J6W A;  3S1M C;  2XCR B;  4C45 A;  5TMC A;  1WOO A;  4WFB S;  5EGH A;  1TWG C;  3GSI A;  4LJZ A;  2E2J C;  4KM8 A;  2GSO A;  1ZBS A;  2NVX K;  4JK1 A;  1WQH A;  3GTP C;  1JOE A;  2A69 A;  1WCM C;  5JVG S;  4P5A A;  4G0W A;  1B4A A;  1K83 A;  2ZJQ S;  2Y0S L;  1I50 A;  3S1N K;  1ZXO A;  2JA6 C;  3PIO S;  4ZH4 A;  3FKI A;  5IOS A;  2V6U A;  2L3U A;  3TTG A;  5TMF A;  3GTG A;  2A6H A;  3GTG K;  1I6V A;  3HOV K;  4KC6 A;  4A3F C;  3ORE A;  1TWH C;  1XZP A;  3RZD K;  3RZO K;  3AQO A;  4A3L K;  1J98 A;  2EBB A;  5IYB C;  3H0G A;  2R92 A;  5IP9 C;  1IE0 A;  4GTL A;  1IQ0 A;  3GEI A;  4AH6 A;  1O2B A;  1O2A A;  4A3E K;  5IP7 K;  2ZJR S;  5JVO A;  4XLN A;  5CHP A;  1EFW A; 
#chains in the Genus database with same CATH homology
 5C44 C;  3PO3 K;  4A93 K;  4C3I K;  4QIW D;  2PA8 L;  5M5Y K;  2R93 C;  4A3E C;  4BXX C;  4MEX A;  3HOZ C;  1R9T C;  4Y7N K;  5IP7 C;  2A68 A;  4A3K C;  3GTO K;  3S2H K;  3PO3 C;  4A93 C;  4C3I C;  2JA8 C;  1I3Q C;  4G7H A;  4Y7N C;  2PPB A;  3HOW K;  4MQ9 A;  2B63 K;  3S1R K;  2BE5 A;  3K7A K;  3I4N C;  5IP9 K;  3S2H C;  4G7O A;  4BBR K;  1TWF K;  2JA7 K;  5IYD K;  1I6H C;  5C4X K;  4YG2 A;  1TWC K;  5M5X K;  5M3M K;  2B63 C;  3S1R C;  3K7A C;  4C3J C;  5IYD C;  2WB1 L;  5IYC K;  4BY7 K;  1TWF C;  2JA7 C;  1BDF A;  2VUM K;  4MEY A;  1TWC C;  4LLG A;  4X6A K;  3HOZ K;  3S2D K;  1R9T K;  1YNJ A;  4Y52 K;  3WOD A;  4G7Z A;  5IYC C;  4A3K K;  4OIP A;  1HQM A;  4BY7 C;  2VUM C;  2JA8 K;  2Y0S D;  4X6A C;  3HKZ L;  1I3Q K;  3GTK C;  3S2D C;  2JA5 K;  4NOI A;  4Y52 C;  3M4O C;  2O5I A;  2CW0 A;  3M3Y C;  2R7Z K;  4YFN A;  4Q5S A;  3I4N K;  3S17 K;  3EQL A;  2PMZ L;  3S1Q K;  4A3D K;  4OIN A;  1Y1W C;  2YU9 K;  1I6H K;  4A3B K;  2JA5 C;  2PA8 D;  2R7Z C;  4OIQ A;  3S17 C;  3S1Q C;  1K83 K;  4QIW L;  4C3J K;  1SFO K;  3GTM K;  4A3J C;  3S15 C;  4A3D C;  1I50 K;  3HOY K;  2YU9 C;  4AYB D;  5M3F K;  4A3B C;  2E2H K;  2E2I C;  3GTQ C;  1K83 C;  4YFX A;  1SFO C;  2NVT K;  1YNN A;  1ZYR A;  3GTM C;  1I50 C;  3HOY C;  1TWG K;  3FKI K;  4QJV B;  5FJ8 K;  4A3I K;  2E2J K;  3S16 K;  4C3H C;  2E2H C;  3GTK K;  3S1M C;  5C4J K;  5TMC A;  2NVY K;  3GTP K;  3M4O K;  3H3V L;  3M3Y K;  4BY1 K;  2NVT C;  1TWG C;  3FKI C;  4KN4 A;  4LJZ A;  2E2J C;  4A3I C;  3S16 C;  4A3G C;  2O5J A;  3PO2 K;  1Y1W K;  2WB1 D;  2NVX K;  4XSX A;  3GTG C;  4JK1 A;  5C4J C;  1WCM K;  2NVY C;  3GTP C;  4BY1 C;  2A69 A;  4LK0 A;  4A3J K;  3S15 K;  3PO2 C;  4C2M K;  5D4D A;  2NVX C;  1WCM C;  2WAQ D;  3RZD C;  2E2I K;  3H0G K;  3GTQ K;  2R92 K;  2NVQ C;  3I4M K;  4A3L C;  2Y0S L;  4XSZ A;  5FLM K;  3DXJ A;  2JA6 C;  3S1N K;  4C2M C;  1TWA K;  4BBS K;  4C3H K;  3S1M K;  3H0G C;  2R92 C;  4ZH4 A;  3I4M C;  4OIO A;  3GTJ K;  5FLM C;  3S1N C;  1Y1V K;  4A3G K;  4A3M K;  1TWA C;  4BBS C;  4A3F K;  5TMF A;  1TWH K;  2A6H A;  3GTG K;  1I6V A;  3HOV K;  4GZY A;  4LK1 A;  3GTJ C;  4AYB L;  1Y1V C;  4OIR A;  3CQZ K;  4A3M C;  1XPP A;  5M5W K;  4A3F C;  3HOX K;  1TWH C;  4KMU A;  4QJV A;  4KN7 A;  3RZD K;  3HOV C;  5IYB K;  3RZO K;  1SMY A;  2NVQ K;  3GTO C;  4A3L K;  3CQZ C;  3HOU K;  2JA6 K;  3GTL K;  3H3V D;  4A3C K;  3HOX C;  4XLP A;  4Q4Z A;  5IYB C;  3RZO C;  3HKZ D;  3HOW C;  3S14 K;  4BBR C;  5IP9 C;  3HOU C;  5C3E K;  3GTL C;  4A3C C;  5C44 K;  5C4X C;  2PMZ D;  2R93 K;  4A3E K;  4BXX K;  2A6E A;  5IP7 K;  1IW7 A;  3S14 C;  4XLN A;  5C3E C;  4YFK A;  2WAQ L; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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