3HOZC

Complete rna polymerase ii elongation complex iv with a t-u mismatch and a frayed rna 3'-guanine
Total Genus 52
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
52
sequence length
266
structure length
266
Chain Sequence
b'EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD'
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Structural basis of transcription: mismatch-specific fidelity mechanisms and paused RNA polymerase II with frayed RNA.
pubmed doi rcsb
molecule tags Transcription,transferase/dna/rna hybrid
total genus 52
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2009-06-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3hozC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3hozC01
4BBSK 4A3FK 2E2IK 4OINA 2PA8D 4C3HC 3RZDC 5C4JC 3S1NC 5C4XC 5M5WK 3S15K 4A3GK 3GTLK 3DXJA 3HOVC 3S14K 5M3FK 4A3EK 2B63C 2A69A 3S1MK 5IYBK 5FJ8K 3HOWK 1TWHK 3S1QC 1ZYRA 1R9TC 2R92C 5IP7C 2JA6K 4A3BC 4A3JK 2Y0SD 2PMZD 3HOUK 3M3YK 2E2HK 4A3KC 2R7ZC 4BBRK 4YG2A 4MQ9A 5TMCA 1I3QK 2NVTC 3GTMK 3HKZL 3I4NC 3FKIC 3GTPK 2E2JK 2O5IA 4Y52K 4A3FC 2VUMK 4Y7NC 5IYCC 3S14C 1BDFA 4YFKA 4A3EC 1TWGC 3H0GC 4YFNA 4A3CK 4A93K 5D4DA 4A3DK 3GTJC 2YU9K 3HOWC 4C2MC 3S1RK 2JA5K 4XLPA 1TWCK 5FLMK 3HOZK 4MEYA 5TMFA 1K83K 4BBRC 3HOYK 3K7AK 4XSZA 3I4MK 3GTKC 2CW0A 2R93C 4BXXK 1HQMA 4LJZA 4ZH4A 1TWFK 2WB1L 2JA7K 4Y52C 2VUMC 2A6HA 4QIWD 3M4OC 1Y1VK 3PO3K 4OIOA 4C3JC 4KN4A 4MEXA 3S2HC 4BY7K 1TWAC 3EQLA 4LK0A 5IYDC 5C3EK 3S2DC 1I50C 3GTQC 1WCMK 4A3MK 1SMYA 4BY1C 3S16K 2WAQD 2JA5C 3PO2C 4BBSC 2E2IC 2NVQK 4LLGA 2BE5A 4A3GC 2PA8L 3GTGK 3S15C 3GTLC 2NVXK 1SFOK 4OIPA 4XSXA 2JA8K 3S1MC 5C44K 5IYBC 5M3MK 5IP9K 1TWHC 4KMUA 3CQZK 3H3VL 4AYBD 2JA6C 3S17K 4BY7C 4KN7A 4A3JC 4LK1A 2NVYK 2Y0SL 2PMZL 3HOUC 5C3EC 3M3YC 2E2HC 3GTMC 4A3IK 4X6AK 1I3QC 4YFXA 4G7ZA 4A3MC 4C3HK 4OIRA 3RZDK 5C4XK 3S1NK 4G7HA 3GTPC 2E2JC 4JK1A 4GZYA 2A68A 1IW7A 5M5YK 2B63K 4XLNA 1R9TK 4A3CC 4A93C 4C3IK 4A3DC 5C44C 4A3BK 2PPBA 5M5XK 2YU9C 4A3KK 2R7ZK 3S1RC 3RZOK 3HKZD 1TWCC 2NVTK 1I6HK 5FLMC 3HOZC 4A3IC 3FKIK 1K83C 3HOYC 1YNJA 3K7AC 3I4MC 4Q5SA 4BXXC 1YNNA 4Y7NK 5IYCK 1TWFC 2JA7C 4QJVA 3HOXK 3GTOK 1TWGK 3H0GK 3PO3C 1Y1VC 4QIWL 1Y1WK 3GTJK 1I6VA 4Q4ZA 4A3LK 3H3VD 4C2MK 1WCMC 4C3IC 1XPPA 5C4JK 4QJVB 3RZOC 3HOVK 3S16C 2WAQL 2NVQC 3GTKK 1I6HC 2R93K 2A6EA 3GTGC 4G7OA 2WB1D 2NVXC 3M4OK 3S1QK 2R92K 1SFOC 4C3JK 2JA8C 5IP7K 3S2HK 1TWAK 5IYDK 3HOXC 3GTOC 5IP9C 3S2DK 3CQZC 3S17C 4NOIA 1I50K 4AYBL 3GTQK 2NVYC 1Y1WC 2O5JA 4BY1K 3I4NK 4X6AC 4A3LC 3WODA 4OIQA 3PO2K
chains in the Genus database with same CATH superfamily
1R9TA 1DCPA 2E2IK 4OINA 4C3HC 3RZDC 5C4JC 1IE0A 1FEUA 3GTLK 4WFBS 5M3FK 3DLLS 1RU0A 2B63C 5IYBK 3HOWK 3S1QC 3AQOA 4A3BC 2PMZD 2E2HK 3GTMK 4BBRK 3H0GA 4MQ9A 5TMCA 3I4NC 4WILA 1VRQC 3GEEA 1C0AA 4YFKA 3GTKA 2R93A 2W7VA 5D4DA 3AD9C 4G0VA 1WOPA 4XLPA 2R92A 1TWCK 4WJ3M 5FLMK 5TMFA 1K83K 3SZZA 1I50A 2CW0A 4BXXK 4PABA 1USOA 5E68A 4Y52C 4MEXA 1BJTA 4WFNS 3OREA 3S2DC 1WCMK 3TFHA 4A3MK 4KC6A 4BY1C 1O2FB 3AD8C 3JSTA 2JA5C 3S16K 1O2BA 3GTPA 1TWHC 3H3VL 2JA6C 4BY7C 5DM6S 4KN7A 1WSVA 3HOUC 5C3EC 5CJ9A 4GTEA 4G7ZA 3AD7C 5HL7S 2PHCB 3BP3A 2E2JC 1X31C 1XZPA 3V4GA 1O26A 1R9TK 2PPBA 1XXBA 3RZOK 2CFAA 1EQRA 3QX3A 2NVTK 4P9SA 3GDZA 3HOZC 3N0BA 3GTMA 3I4MC 4GTAA 3T02A 4Y7NK 1WOSA 2JA7C 3HOXK 3H0GK 3PO3C 1O29A 4Q4ZA 4C2MK 3AH5A 1O28A 4KMAA 4QJVB 1GE9A 3GTKK 1I6HC 2R93K 2A6EA 1WSRA 4G7OA 5HQHA 2NVXC 1XZQB 1IL2A 2R92K 1SFOC 4P5AA 4IO9S 5IYDK 2P8TA 5IOTA 3PIPS 3S17C 1I50K 4AYBL 2ZUFA 4X6AC 3WODA 3PO2K 4BBSK 3L4KA 4A3FK 3S1NC 3S15K 3DXJA 3HOVC 4DDQA 2KXYA 1B4BA 3ADAC 2GSUA 5IP7C 1KQ4A 3M3YK 2R7ZC 4YG2A 1Y1WA 3HXAA 3FKIC 3GTPK 4GTLA 2FQOA 4GTBA 3MMLB 1VH2A 1BDFA 1TWGC 4YFNA 4A3CK 3GTJC 4IOAS 3VA7A 2YU9K 3HOWC 1F7UA 3S1RK 4MEYA 4BBRC 3HOYK 3K7AK 4XSZA 5JFEA 3N3YA 4LJZA 2WB1L 4KAWX 3M4OC 3FOEA 4C3JC 4KN4A 4LK0A 3EQLA 3GTQC 1YCLA 3GIRA 4PAAA 2NVQK 2BE5A 4A3GC 4KASA 2PA8L 4FZBA 4KM9A 3S1MC 4U67S 4KMUA 3CQZK 2VUMA 2GSNA 4AYBD 2KPUA 4LOWA 4A3JC 2NVYK 2Y0SL 4A3IK 1I3QC 4A3MC 1VLOA 4C3HK 3RZDK 4LQYA 4IOCS 2B63K 3SZYA 1PJ5A 4A3BK 4A93C 4A3DC 3A8JA 2JA7A 3IPJA 5M5XK 4WFAS 3LAJA 4Q5SA 4WCES 1TWFC 5IOSA 4QJVA 4GTCA 1Y1VC 3L4JA 3CAGA 5EGEA 1I6VA 1JQWA 1Y1WK 1XPPA 1BS2A 2YU9A 3RZOC 2D6FC 1BGWA 2GAHC 3GTGC 2WB1D 4ILDA 2JA8C 3HOXC 5IP9C 1DD5A 3S2DK 4NOIA 5JVHS 4BY1K 5JVOA 1EFWA 2GSOA 1WORA 4OIQA 2L3UA 2XCRB 2PA8D 1ZVUA 1WOOA 5C4XC 2R7ZA 3S14K 4WF9S 4GTDA 4A3EK 3G4CA 3FKIA 2A69A 4M1XA 5FJ8K 1TWHK 3OPFA 2R92C 2JA6K 2Y0SD 3HOUK 3GTOA 4A3KC 1TWGA 3CQZA 2V6UA 4GFQA 3HKZL 2NVYA 2E2JK 2O5IA 2EBBA 4A3FC 2VUMK 4G0WA 5IYCC 1IS1A 3FHZA 1WIHA 5EGHA 2B63A 3G4AA 1WQFA 4G0UA 4GT9A 3HOZK 1J98A 1XXCA 3I4MK 3GTQA 1HQMA 2JA7K 4ZH4A 3S0XA 3PO3K 4KDDA 3TFJA 3S2HC 1J6XA 1UV7A 1TWAC 3A8KA 3N0CA 1L0WA 3BUEA 2E2IC 4LLGA 3LAPA 3GTLC 2NVXK 2ZUEA 1O2AA 1SFOK 4XSXA 3PIOS 5C44K 5IYBC 4AH6A 5M3MK 1WQHA 2KQ1A 3S17K 2FQTA 4X6AK 2E2HC 3GTMC 3CF5S 2L5NA 1V5VA 4OIRA 3S1NK 1EK8A 2JA5A 4KATA 2A68A 1IW7A 1EI6A 5L46A 2GAGC 5IORA 4RMFA 4C3IK 1TWFA 2R7ZK 1TWHA 1O25A 3HKZD 1TWCC 1Y1VA 2JA6A 3A8IA 5FLMC 2ZFZA 4A3IC 3FKIK 1K83C 2RGRA 1YNJA 2XCOA 1F93A 4BXXC 1J6VA 1IBAA 3GTOK 1TWGK 4QIWL 3GTGA 3GTJK 4A3LK 1F7VA 1WCMC 1EH1A 5C4JK 3S16C 2WAQL 2ZJRS 1DCHA 1DCOA 3M4OK 3S1QK 4C3JK 1ZQ1C 3GTQK 5IOQA 3LYWA 1Y1WC 2O5JA 3I4NK 3BP8C 1JVIA 4A3GK 2ZJQS 5M5WK 3OEPA 2V6TA 1F9NA 3S1MK 2NVXA 1ZYRA 1R9TC 1SFOA 1XZQA 4A3JK 1I3QK 2NVTC 2V6SA 3GSIA 4BLAA 4O2DA 4Y52K 1ZBSA 1INNA 1IQ0A 3T01A 2RH6A 4Y7NC 3S14C 1PJ7A 4A3EC 3H0GC 5CHPA 4A93K 1JOEA 4A3DK 4C45A 4C2MC 4KMDA 2JA5K 4BLBA 1O27A 1TWAA 3GTKC 2R93C 5TJ3A 4KMHA 1TWFK 3FOFA 2E2IA 2VUMC 2A6HA 4QIWD 3T00A 1Y1VK 4OIOA 4BY7K 3GTLA 5IYDC 5C3EK 5JVGS 4GTFA 4KB4A 1J6WA 1I50C 1O24A 1HI9A 1SMYA 5HL8A 3GTJA 2WAQD 3PO2C 4BBSC 1G51A 3GTGK 3S15C 2E2HA 2KWAA 4OIPA 2JA8K 5DM7S 1ISEA 4KB2A 5IP9K 4LR2A 4LK1A 2JH3A 2PMZL 3M3YC 1WQGA 3LPXA 4YFXA 4BKWA 3AQPA 5C4XK 4KM8A 4G7HA 1VJEA 3GTPC 4JK1A 4GZYA 1TWCA 2P5MA 4KARA 5M5YK 1K83A 4J3NA 4XLNA 4A3CC 2XCQA 5C44C 1USMA 3TFIA 4XCHA 2YU9C 4A3KK 3S1RC 1XZPB 3GEHA 1I6HK 1VGXA 4WJ4A 3HOYC 3K7AC 1I3QA 1WCMA 3TTGA 3ERED 1YNNA 5IYCK 2CFAB 4P5BA 1XXAA 1YX2A 1B4AA 4FM9A 3H3VD 1ZXOA 4C3IC 1AB4A 3HOVK 3GEIA 2NVQC 1PJ6A 2Y3PA 5IP7K 3S2HK 1TWAK 3GTOC 3CQZC 3NUHA 3Q3QA 2NVYC 2ZJPS 4A3LC
chains in the Genus database with same CATH topology
4BBSK 4A3FK 2E2IK 4OINA 2PA8D 4C3HC 3RZDC 5C4JC 3S1NC 5C4XC 5M5WK 3S15K 4A3GK 3GTLK 3DXJA 3HOVC 3S14K 5M3FK 4A3EK 2B63C 2A69A 3S1MK 5IYBK 5FJ8K 3HOWK 1TWHK 3S1QC 1ZYRA 1R9TC 2R92C 5IP7C 2JA6K 4A3BC 4A3JK 2Y0SD 2PMZD 3HOUK 3M3YK 2E2HK 4A3KC 2R7ZC 4BBRK 4YG2A 4MQ9A 5TMCA 1I3QK 2NVTC 3GTMK 3HKZL 3I4NC 3FKIC 3GTPK 2E2JK 2O5IA 4Y52K 4A3FC 2VUMK 4Y7NC 5IYCC 3S14C 1BDFA 4YFKA 4A3EC 1TWGC 3H0GC 4YFNA 4A3CK 4A93K 5D4DA 4A3DK 3GTJC 2YU9K 3HOWC 4C2MC 3S1RK 2JA5K 4XLPA 1TWCK 5FLMK 3HOZK 4MEYA 5TMFA 1K83K 4BBRC 3HOYK 3K7AK 4XSZA 3I4MK 3GTKC 2CW0A 2R93C 4BXXK 1HQMA 4LJZA 4ZH4A 1TWFK 2WB1L 2JA7K 4Y52C 2VUMC 2A6HA 4QIWD 3M4OC 1Y1VK 3PO3K 4OIOA 4C3JC 4KN4A 4MEXA 3S2HC 4BY7K 1TWAC 3EQLA 4LK0A 5IYDC 5C3EK 3S2DC 1I50C 3GTQC 1WCMK 4A3MK 1SMYA 4BY1C 3S16K 2WAQD 2JA5C 3PO2C 4BBSC 2E2IC 2NVQK 4LLGA 2BE5A 4A3GC 2PA8L 3GTGK 3S15C 3GTLC 2NVXK 1SFOK 4OIPA 4XSXA 2JA8K 3S1MC 5C44K 5IYBC 5M3MK 5IP9K 1TWHC 4KMUA 3CQZK 3H3VL 4AYBD 2JA6C 3S17K 4BY7C 4KN7A 4A3JC 4LK1A 2NVYK 2Y0SL 2PMZL 3HOUC 5C3EC 3M3YC 2E2HC 3GTMC 4A3IK 4X6AK 1I3QC 4YFXA 4G7ZA 4A3MC 4C3HK 4OIRA 3RZDK 5C4XK 3S1NK 4G7HA 3GTPC 2E2JC 4JK1A 4GZYA 2A68A 1IW7A 5M5YK 2B63K 4XLNA 1R9TK 4A3CC 4A93C 4C3IK 4A3DC 5C44C 4A3BK 2PPBA 5M5XK 2YU9C 4A3KK 2R7ZK 3S1RC 3RZOK 3HKZD 1TWCC 2NVTK 1I6HK 5FLMC 3HOZC 4A3IC 3FKIK 1K83C 3HOYC 1YNJA 3K7AC 3I4MC 4Q5SA 4BXXC 1YNNA 4Y7NK 5IYCK 1TWFC 2JA7C 4QJVA 3HOXK 3GTOK 1TWGK 3H0GK 3PO3C 1Y1VC 4QIWL 1Y1WK 3GTJK 1I6VA 4Q4ZA 4A3LK 3H3VD 4C2MK 1WCMC 4C3IC 1XPPA 5C4JK 4QJVB 3RZOC 3HOVK 3S16C 2WAQL 2NVQC 3GTKK 1I6HC 2R93K 2A6EA 3GTGC 4G7OA 2WB1D 2NVXC 3M4OK 3S1QK 2R92K 1SFOC 4C3JK 2JA8C 5IP7K 3S2HK 1TWAK 5IYDK 3HOXC 3GTOC 5IP9C 3S2DK 3CQZC 3S17C 4NOIA 1I50K 4AYBL 3GTQK 2NVYC 1Y1WC 2O5JA 4BY1K 3I4NK 4X6AC 4A3LC 3WODA 4OIQA 3PO2K
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4BBS K;  4A3F K;  2E2I K;  4OIN A;  2PA8 D;  4C3H C;  3RZD C;  5C4J C;  3S1N C;  5C4X C;  5M5W K;  3S15 K;  4A3G K;  3GTL K;  3DXJ A;  3HOV C;  3S14 K;  5M3F K;  4A3E K;  2B63 C;  2A69 A;  3S1M K;  5IYB K;  5FJ8 K;  3HOW K;  1TWH K;  3S1Q C;  1ZYR A;  1R9T C;  2R92 C;  5IP7 C;  2JA6 K;  4A3B C;  4A3J K;  2Y0S D;  2PMZ D;  3HOU K;  3M3Y K;  2E2H K;  4A3K C;  2R7Z C;  4BBR K;  4YG2 A;  4MQ9 A;  5TMC A;  1I3Q K;  2NVT C;  3GTM K;  3HKZ L;  3I4N C;  3FKI C;  3GTP K;  2E2J K;  2O5I A;  4Y52 K;  4A3F C;  2VUM K;  4Y7N C;  5IYC C;  3S14 C;  1BDF A;  4YFK A;  4A3E C;  1TWG C;  3H0G C;  4YFN A;  4A3C K;  4A93 K;  5D4D A;  4A3D K;  3GTJ C;  2YU9 K;  3HOW C;  4C2M C;  3S1R K;  2JA5 K;  4XLP A;  1TWC K;  5FLM K;  3HOZ K;  4MEY A;  5TMF A;  1K83 K;  4BBR C;  3HOY K;  3K7A K;  4XSZ A;  3I4M K;  3GTK C;  2CW0 A;  2R93 C;  4BXX K;  1HQM A;  4LJZ A;  4ZH4 A;  1TWF K;  2WB1 L;  2JA7 K;  4Y52 C;  2VUM C;  2A6H A;  4QIW D;  3M4O C;  1Y1V K;  3PO3 K;  4OIO A;  4C3J C;  4KN4 A;  4MEX A;  3S2H C;  4BY7 K;  1TWA C;  3EQL A;  4LK0 A;  5IYD C;  5C3E K;  3S2D C;  1I50 C;  3GTQ C;  1WCM K;  4A3M K;  1SMY A;  4BY1 C;  3S16 K;  2WAQ D;  2JA5 C;  3PO2 C;  4BBS C;  2E2I C;  2NVQ K;  4LLG A;  2BE5 A;  4A3G C;  2PA8 L;  3GTG K;  3S15 C;  3GTL C;  2NVX K;  1SFO K;  4OIP A;  4XSX A;  2JA8 K;  3S1M C;  5C44 K;  5IYB C;  5M3M K;  5IP9 K;  1TWH C;  4KMU A;  3CQZ K;  3H3V L;  4AYB D;  2JA6 C;  3S17 K;  4BY7 C;  4KN7 A;  4A3J C;  4LK1 A;  2NVY K;  2Y0S L;  2PMZ L;  3HOU C;  5C3E C;  3M3Y C;  2E2H C;  3GTM C;  4A3I K;  4X6A K;  1I3Q C;  4YFX A;  4G7Z A;  4A3M C;  4C3H K;  4OIR A;  3RZD K;  5C4X K;  3S1N K;  4G7H A;  3GTP C;  2E2J C;  4JK1 A;  4GZY A;  2A68 A;  1IW7 A;  5M5Y K;  2B63 K;  4XLN A;  1R9T K;  4A3C C;  4A93 C;  4C3I K;  4A3D C;  5C44 C;  4A3B K;  2PPB A;  5M5X K;  2YU9 C;  4A3K K;  2R7Z K;  3S1R C;  3RZO K;  3HKZ D;  1TWC C;  2NVT K;  1I6H K;  5FLM C;  3HOZ C;  4A3I C;  3FKI K;  1K83 C;  3HOY C;  1YNJ A;  3K7A C;  3I4M C;  4Q5S A;  4BXX C;  1YNN A;  4Y7N K;  5IYC K;  1TWF C;  2JA7 C;  4QJV A;  3HOX K;  3GTO K;  1TWG K;  3H0G K;  3PO3 C;  1Y1V C;  4QIW L;  1Y1W K;  3GTJ K;  1I6V A;  4Q4Z A;  4A3L K;  3H3V D;  4C2M K;  1WCM C;  4C3I C;  1XPP A;  5C4J K;  4QJV B;  3RZO C;  3HOV K;  3S16 C;  2WAQ L;  2NVQ C;  3GTK K;  1I6H C;  2R93 K;  2A6E A;  3GTG C;  4G7O A;  2WB1 D;  2NVX C;  3M4O K;  3S1Q K;  2R92 K;  1SFO C;  4C3J K;  2JA8 C;  5IP7 K;  3S2H K;  1TWA K;  5IYD K;  3HOX C;  3GTO C;  5IP9 C;  3S2D K;  3CQZ C;  3S17 C;  4NOI A;  1I50 K;  4AYB L;  3GTQ K;  2NVY C;  1Y1W C;  2O5J A;  4BY1 K;  3I4N K;  4X6A C;  4A3L C;  3WOD A;  4OIQ A;  3PO2 K; 
#chains in the Genus database with same CATH topology
 1R9T A;  1DCP A;  2E2I K;  4OIN A;  4C3H C;  3RZD C;  5C4J C;  1IE0 A;  1FEU A;  3GTL K;  4WFB S;  5M3F K;  3DLL S;  1RU0 A;  2B63 C;  5IYB K;  3HOW K;  3S1Q C;  3AQO A;  4A3B C;  2PMZ D;  2E2H K;  3GTM K;  4BBR K;  3H0G A;  4MQ9 A;  5TMC A;  3I4N C;  4WIL A;  1VRQ C;  3GEE A;  1C0A A;  4YFK A;  3GTK A;  2R93 A;  2W7V A;  5D4D A;  3AD9 C;  4G0V A;  1WOP A;  4XLP A;  2R92 A;  1TWC K;  4WJ3 M;  5FLM K;  5TMF A;  1K83 K;  3SZZ A;  1I50 A;  2CW0 A;  4BXX K;  4PAB A;  1USO A;  5E68 A;  4Y52 C;  4MEX A;  1BJT A;  4WFN S;  3ORE A;  3S2D C;  1WCM K;  3TFH A;  4A3M K;  4KC6 A;  4BY1 C;  1O2F B;  3AD8 C;  3JST A;  2JA5 C;  3S16 K;  1O2B A;  3GTP A;  1TWH C;  3H3V L;  2JA6 C;  4BY7 C;  5DM6 S;  4KN7 A;  1WSV A;  3HOU C;  5C3E C;  5CJ9 A;  4GTE A;  4G7Z A;  3AD7 C;  5HL7 S;  2PHC B;  3BP3 A;  2E2J C;  1X31 C;  1XZP A;  3V4G A;  1O26 A;  1R9T K;  2PPB A;  1XXB A;  3RZO K;  2CFA A;  1EQR A;  3QX3 A;  2NVT K;  4P9S A;  3GDZ A;  3HOZ C;  3N0B A;  3GTM A;  3I4M C;  4GTA A;  3T02 A;  4Y7N K;  1WOS A;  2JA7 C;  3HOX K;  3H0G K;  3PO3 C;  1O29 A;  4Q4Z A;  4C2M K;  3AH5 A;  1O28 A;  4KMA A;  4QJV B;  1GE9 A;  3GTK K;  1I6H C;  2R93 K;  2A6E A;  1WSR A;  4G7O A;  5HQH A;  2NVX C;  1XZQ B;  1IL2 A;  2R92 K;  1SFO C;  4P5A A;  4IO9 S;  5IYD K;  2P8T A;  5IOT A;  3PIP S;  3S17 C;  1I50 K;  4AYB L;  2ZUF A;  4X6A C;  3WOD A;  3PO2 K;  4BBS K;  3L4K A;  4A3F K;  3S1N C;  3S15 K;  3DXJ A;  3HOV C;  4DDQ A;  2KXY A;  1B4B A;  3ADA C;  2GSU A;  5IP7 C;  1KQ4 A;  3M3Y K;  2R7Z C;  4YG2 A;  1Y1W A;  3HXA A;  3FKI C;  3GTP K;  4GTL A;  2FQO A;  4GTB A;  3MML B;  1VH2 A;  1BDF A;  1TWG C;  4YFN A;  4A3C K;  3GTJ C;  4IOA S;  3VA7 A;  2YU9 K;  3HOW C;  1F7U A;  3S1R K;  4MEY A;  4BBR C;  3HOY K;  3K7A K;  4XSZ A;  5JFE A;  3N3Y A;  4LJZ A;  2WB1 L;  4KAW X;  3M4O C;  3FOE A;  4C3J C;  4KN4 A;  4LK0 A;  3EQL A;  3GTQ C;  1YCL A;  3GIR A;  4PAA A;  2NVQ K;  2BE5 A;  4A3G C;  4KAS A;  2PA8 L;  4FZB A;  4KM9 A;  3S1M C;  4U67 S;  4KMU A;  3CQZ K;  2VUM A;  2GSN A;  4AYB D;  2KPU A;  4LOW A;  4A3J C;  2NVY K;  2Y0S L;  4A3I K;  1I3Q C;  4A3M C;  1VLO A;  4C3H K;  3RZD K;  4LQY A;  4IOC S;  2B63 K;  3SZY A;  1PJ5 A;  4A3B K;  4A93 C;  4A3D C;  3A8J A;  2JA7 A;  3IPJ A;  5M5X K;  4WFA S;  3LAJ A;  4Q5S A;  4WCE S;  1TWF C;  5IOS A;  4QJV A;  4GTC A;  1Y1V C;  3L4J A;  3CAG A;  5EGE A;  1I6V A;  1JQW A;  1Y1W K;  1XPP A;  1BS2 A;  2YU9 A;  3RZO C;  2D6F C;  1BGW A;  2GAH C;  3GTG C;  2WB1 D;  4ILD A;  2JA8 C;  3HOX C;  5IP9 C;  1DD5 A;  3S2D K;  4NOI A;  5JVH S;  4BY1 K;  5JVO A;  1EFW A;  2GSO A;  1WOR A;  4OIQ A;  2L3U A;  2XCR B;  2PA8 D;  1ZVU A;  1WOO A;  5C4X C;  2R7Z A;  3S14 K;  4WF9 S;  4GTD A;  4A3E K;  3G4C A;  3FKI A;  2A69 A;  4M1X A;  5FJ8 K;  1TWH K;  3OPF A;  2R92 C;  2JA6 K;  2Y0S D;  3HOU K;  3GTO A;  4A3K C;  1TWG A;  3CQZ A;  2V6U A;  4GFQ A;  3HKZ L;  2NVY A;  2E2J K;  2O5I A;  2EBB A;  4A3F C;  2VUM K;  4G0W A;  5IYC C;  1IS1 A;  3FHZ A;  1WIH A;  5EGH A;  2B63 A;  3G4A A;  1WQF A;  4G0U A;  4GT9 A;  3HOZ K;  1J98 A;  1XXC A;  3I4M K;  3GTQ A;  1HQM A;  2JA7 K;  4ZH4 A;  3S0X A;  3PO3 K;  4KDD A;  3TFJ A;  3S2H C;  1J6X A;  1UV7 A;  1TWA C;  3A8K A;  3N0C A;  1L0W A;  3BUE A;  2E2I C;  4LLG A;  3LAP A;  3GTL C;  2NVX K;  2ZUE A;  1O2A A;  1SFO K;  4XSX A;  3PIO S;  5C44 K;  5IYB C;  4AH6 A;  5M3M K;  1WQH A;  2KQ1 A;  3S17 K;  2FQT A;  4X6A K;  2E2H C;  3GTM C;  3CF5 S;  2L5N A;  1V5V A;  4OIR A;  3S1N K;  1EK8 A;  2JA5 A;  4KAT A;  2A68 A;  1IW7 A;  1EI6 A;  5L46 A;  2GAG C;  5IOR A;  4RMF A;  4C3I K;  1TWF A;  2R7Z K;  1TWH A;  1O25 A;  3HKZ D;  1TWC C;  1Y1V A;  2JA6 A;  3A8I A;  5FLM C;  2ZFZ A;  4A3I C;  3FKI K;  1K83 C;  2RGR A;  1YNJ A;  2XCO A;  1F93 A;  4BXX C;  1J6V A;  1IBA A;  3GTO K;  1TWG K;  4QIW L;  3GTG A;  3GTJ K;  4A3L K;  1F7V A;  1WCM C;  1EH1 A;  5C4J K;  3S16 C;  2WAQ L;  2ZJR S;  1DCH A;  1DCO A;  3M4O K;  3S1Q K;  4C3J K;  1ZQ1 C;  3GTQ K;  5IOQ A;  3LYW A;  1Y1W C;  2O5J A;  3I4N K;  3BP8 C;  1JVI A;  4A3G K;  2ZJQ S;  5M5W K;  3OEP A;  2V6T A;  1F9N A;  3S1M K;  2NVX A;  1ZYR A;  1R9T C;  1SFO A;  1XZQ A;  4A3J K;  1I3Q K;  2NVT C;  2V6S A;  3GSI A;  4BLA A;  4O2D A;  4Y52 K;  1ZBS A;  1INN A;  1IQ0 A;  3T01 A;  2RH6 A;  4Y7N C;  3S14 C;  1PJ7 A;  4A3E C;  3H0G C;  5CHP A;  4A93 K;  1JOE A;  4A3D K;  4C45 A;  4C2M C;  4KMD A;  2JA5 K;  4BLB A;  1O27 A;  1TWA A;  3GTK C;  2R93 C;  5TJ3 A;  4KMH A;  1TWF K;  3FOF A;  2E2I A;  2VUM C;  2A6H A;  4QIW D;  3T00 A;  1Y1V K;  4OIO A;  4BY7 K;  3GTL A;  5IYD C;  5C3E K;  5JVG S;  4GTF A;  4KB4 A;  1J6W A;  1I50 C;  1O24 A;  1HI9 A;  1SMY A;  5HL8 A;  3GTJ A;  2WAQ D;  3PO2 C;  4BBS C;  1G51 A;  3GTG K;  3S15 C;  2E2H A;  2KWA A;  4OIP A;  2JA8 K;  5DM7 S;  1ISE A;  4KB2 A;  5IP9 K;  4LR2 A;  4LK1 A;  2JH3 A;  2PMZ L;  3M3Y C;  1WQG A;  3LPX A;  4YFX A;  4BKW A;  3AQP A;  5C4X K;  4KM8 A;  4G7H A;  1VJE A;  3GTP C;  4JK1 A;  4GZY A;  1TWC A;  2P5M A;  4KAR A;  5M5Y K;  1K83 A;  4J3N A;  4XLN A;  4A3C C;  2XCQ A;  5C44 C;  1USM A;  3TFI A;  4XCH A;  2YU9 C;  4A3K K;  3S1R C;  1XZP B;  3GEH A;  1I6H K;  1VGX A;  4WJ4 A;  3HOY C;  3K7A C;  1I3Q A;  1WCM A;  3TTG A;  3ERE D;  1YNN A;  5IYC K;  2CFA B;  4P5B A;  1XXA A;  1YX2 A;  1B4A A;  4FM9 A;  3H3V D;  1ZXO A;  4C3I C;  1AB4 A;  3HOV K;  3GEI A;  2NVQ C;  1PJ6 A;  2Y3P A;  5IP7 K;  3S2H K;  1TWA K;  3GTO C;  3CQZ C;  3NUH A;  3Q3Q A;  2NVY C;  2ZJP S;  4A3L C; 
#chains in the Genus database with same CATH homology
 4BBS K;  4A3F K;  2E2I K;  4OIN A;  2PA8 D;  4C3H C;  3RZD C;  5C4J C;  3S1N C;  5C4X C;  5M5W K;  3S15 K;  4A3G K;  3GTL K;  3DXJ A;  3HOV C;  3S14 K;  5M3F K;  4A3E K;  2B63 C;  2A69 A;  3S1M K;  5IYB K;  5FJ8 K;  3HOW K;  1TWH K;  3S1Q C;  1ZYR A;  1R9T C;  2R92 C;  5IP7 C;  2JA6 K;  4A3B C;  4A3J K;  2Y0S D;  2PMZ D;  3HOU K;  3M3Y K;  2E2H K;  4A3K C;  2R7Z C;  4BBR K;  4YG2 A;  4MQ9 A;  5TMC A;  1I3Q K;  2NVT C;  3GTM K;  3HKZ L;  3I4N C;  3FKI C;  3GTP K;  2E2J K;  2O5I A;  4Y52 K;  4A3F C;  2VUM K;  4Y7N C;  5IYC C;  3S14 C;  1BDF A;  4YFK A;  4A3E C;  1TWG C;  3H0G C;  4YFN A;  4A3C K;  4A93 K;  5D4D A;  4A3D K;  3GTJ C;  2YU9 K;  3HOW C;  4C2M C;  3S1R K;  2JA5 K;  4XLP A;  1TWC K;  5FLM K;  3HOZ K;  4MEY A;  5TMF A;  1K83 K;  4BBR C;  3HOY K;  3K7A K;  4XSZ A;  3I4M K;  3GTK C;  2CW0 A;  2R93 C;  4BXX K;  1HQM A;  4LJZ A;  4ZH4 A;  1TWF K;  2WB1 L;  2JA7 K;  4Y52 C;  2VUM C;  2A6H A;  4QIW D;  3M4O C;  1Y1V K;  3PO3 K;  4OIO A;  4C3J C;  4KN4 A;  4MEX A;  3S2H C;  4BY7 K;  1TWA C;  3EQL A;  4LK0 A;  5IYD C;  5C3E K;  3S2D C;  1I50 C;  3GTQ C;  1WCM K;  4A3M K;  1SMY A;  4BY1 C;  3S16 K;  2WAQ D;  2JA5 C;  3PO2 C;  4BBS C;  2E2I C;  2NVQ K;  4LLG A;  2BE5 A;  4A3G C;  2PA8 L;  3GTG K;  3S15 C;  3GTL C;  2NVX K;  1SFO K;  4OIP A;  4XSX A;  2JA8 K;  3S1M C;  5C44 K;  5IYB C;  5M3M K;  5IP9 K;  1TWH C;  4KMU A;  3CQZ K;  3H3V L;  4AYB D;  2JA6 C;  3S17 K;  4BY7 C;  4KN7 A;  4A3J C;  4LK1 A;  2NVY K;  2Y0S L;  2PMZ L;  3HOU C;  5C3E C;  3M3Y C;  2E2H C;  3GTM C;  4A3I K;  4X6A K;  1I3Q C;  4YFX A;  4G7Z A;  4A3M C;  4C3H K;  4OIR A;  3RZD K;  5C4X K;  3S1N K;  4G7H A;  3GTP C;  2E2J C;  4JK1 A;  4GZY A;  2A68 A;  1IW7 A;  5M5Y K;  2B63 K;  4XLN A;  1R9T K;  4A3C C;  4A93 C;  4C3I K;  4A3D C;  5C44 C;  4A3B K;  2PPB A;  5M5X K;  2YU9 C;  4A3K K;  2R7Z K;  3S1R C;  3RZO K;  3HKZ D;  1TWC C;  2NVT K;  1I6H K;  5FLM C;  3HOZ C;  4A3I C;  3FKI K;  1K83 C;  3HOY C;  1YNJ A;  3K7A C;  3I4M C;  4Q5S A;  4BXX C;  1YNN A;  4Y7N K;  5IYC K;  1TWF C;  2JA7 C;  4QJV A;  3HOX K;  3GTO K;  1TWG K;  3H0G K;  3PO3 C;  1Y1V C;  4QIW L;  1Y1W K;  3GTJ K;  1I6V A;  4Q4Z A;  4A3L K;  3H3V D;  4C2M K;  1WCM C;  4C3I C;  1XPP A;  5C4J K;  4QJV B;  3RZO C;  3HOV K;  3S16 C;  2WAQ L;  2NVQ C;  3GTK K;  1I6H C;  2R93 K;  2A6E A;  3GTG C;  4G7O A;  2WB1 D;  2NVX C;  3M4O K;  3S1Q K;  2R92 K;  1SFO C;  4C3J K;  2JA8 C;  5IP7 K;  3S2H K;  1TWA K;  5IYD K;  3HOX C;  3GTO C;  5IP9 C;  3S2D K;  3CQZ C;  3S17 C;  4NOI A;  1I50 K;  4AYB L;  3GTQ K;  2NVY C;  1Y1W C;  2O5J A;  4BY1 K;  3I4N K;  4X6A C;  4A3L C;  3WOD A;  4OIQ A;  3PO2 K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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