3HOZC

Complete rna polymerase ii elongation complex iv with a t-u mismatch and a frayed rna 3'-guanine
Total Genus 52
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
52
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Structural basis of transcription: mismatch-specific fidelity mechanisms and paused RNA polymerase II with frayed RNA.
pubmed doi rcsb
molecule tags Transcription,transferase/dna/rna hybrid
total genus 52
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2009-06-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3hozC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3hozC01
5C44K 5M5XK 3EQLA 3S1NK 2JA7K 3RZDK 3GTMC 2WAQD 1Y1WK 2R93C 3H0GC 3CQZC 4C3IK 1HQMA 2PMZD 5IP9K 5IYCK 4A3MK 2B63C 2E2IC 4OIPA 2NVYK 4QJVA 2R7ZK 4MEYA 3FKIK 1TWCC 3S14K 4XSXA 2PA8D 4AYBD 1YNJA 4YFKA 5D4DA 3RZOC 3S15C 1K83C 2JA8K 4OIRA 2NVQC 3K7AC 3S16C 4BXXK 4YG2A 3I4MK 1IW7A 5IYBC 4BY7C 5M3MK 3M3YC 3H0GK 4A3GC 1YNNA 4C2MC 4C3HC 2A69A 2E2IK 2O5JA 2B63K 5C44C 1TWCK 3S1NC 5C3EK 2Y0SD 4YFNA 3S15K 1K83K 4XLNA 2NVQK 4Y52K 4A3MC 2R7ZC 2NVYC 4BY7K 3FKIC 3S14C 3M3YK 5M3FK 3HOZK 4A3BC 4C2MK 5TMCA 4BXXC 4QJVB 4YFXA 3S1QK 1WCMK 2YU9C 1TWFC 3I4MC 4A3GK 4KN4A 3HKZD 4LK0A 4LK1A 4MQ9A 4XSZA 1I6HC 1Y1VK 2CW0A 4KMUA 5IP7C 2R92C 1I3QK 5C3EC 1R9TC 2PPBA 4A3BK 4G7ZA 4GZYA 1TWHK 4Y7NC 5C4XK 1BDFA 5FLMK 1SFOK 1ZYRA 4Y52C 5IYDC 2YU9K 1TWFK 3H3VL 4A3IC 3GTPC 4G7HA 4NOIA 1I6HK 3HOZC 4A3CC 5IP7K 2JA5K 4X6AC 2R92K 3PO2C 3HOXC 1I50K 3S1QC 1WCMC 1R9TK 3M4OK 3WODA 2A68A 4Y7NK 2E2HK 4C3JK 1Y1VC 3S1RC 2A6HA 4QIWL 5IYDK 4A3IK 3GTPK 4OIOA 1I6VA 1I3QC 4BY1K 4A3CK 5FLMC 1TWHC 5C4XC 1SFOC 4X6AK 4A3JC 2JA6K 3PO2K 3HOXK 4A3KC 3GTGC 2WB1L 3S1RK 5FJ8K 4A3FC 2JA5C 3S1MC 4XLPA 4A3EK 2VUMC 1I50C 4OIQA 4Q5SA 3M4OC 3GTLC 1XPPA 4ZH4A 2E2HC 3HOVC 4C3JC 4A3JK 4OINA 3S17K 4A3KK 4KN7A 3DXJA 3GTGK 5M5YK 4BY1C 4LLGA 4A3FK 4BBSK 3GTKK 3S1MK 3GTOK 3S2DK 4A3DK 2JA6C 1TWAK 2WAQL 5M5WK 3H3VD 4A3LC 2VUMK 3GTQC 2E2JK 3GTLK 4JK1A 2PMZL 3HOVK 2A6EA 2NVXK 4BBRC 4A93K 3I4NC 2PA8L 4AYBL 4A3EC 4G7OA 3HOUC 1TWGK 3GTJK 3S2HK 3HOYC 3S17C 4QIWD 4A3LK 2NVTC 3PO3K 3GTQK 1SMYA 2BE5A 5TMFA 4MEXA 4BBRK 4BBSC 3GTKC 3I4NK 3GTOC 2Y0SL 3S2DC 5C4JC 4A3DC 1TWAC 3GTMK 4LJZA 3HOUK 2R93K 3CQZK 2E2JC 2WB1D 2O5IA 3HOYK 2NVXC 2NVTK 4A93C 3RZOK 2JA7C 4Q4ZA 3RZDC 1Y1WC 3HOWK 1TWGC 3K7AK 3S16K 4C3IC 5IYCC 5IP9C 3GTJC 3S2HC 5C4JK 5IYBK 3PO3C 3HOWC 2JA8C 3HKZL 4C3HK
chains in the Genus database with same CATH superfamily
3EQLA 4KB4A 1EI6A 3RZDK 1Y1WK 1HQMA 5IYCK 4A3MK 2B63C 4OIPA 4WFBS 4MEYA 3S14K 2JA8K 1K83C 3JSTA 4OIRA 3S16C 1DCPA 1O27A 4YG2A 4WFAS 4KM9A 1VH2A 5M3MK 3A8IA 3AD7C 3M3YC 3OPFA 1YCLA 4C2MC 5IOQA 2A69A 2B63K 5L46A 4YFNA 2D6FC 1K83K 4Y52K 1VRQC 2YU9A 2R7ZC 3M3YK 4KB2A 5M3FK 4C2MK 3G4AA 3TFIA 2V6UA 3LPXA 2R92A 4YFXA 1USMA 1WCMK 3I4MC 2KPUA 4IOAS 1I6HC 1Y1VK 4KMUA 5IP7C 2CFAA 3MMLB 1R9TC 2PHCB 1BDFA 1SFOK 1EQRA 4G0WA 4A3IC 4G7HA 4NOIA 1L0WA 4AH6A 1I6HK 4J3NA 1XXCA 1J6VA 5IP7K 2JA5K 1I50K 1R9TK 2E2HK 2A6HA 4A3IK 3GTGA 4OIOA 1I6VA 1TWHC 4A3JC 2CFAB 4PABA 2JH3A 5IOTA 4OIQA 3SZZA 3M4OC 4KM8A 1XPPA 4O2DA 4A3JK 4OINA 4GTEA 1WORA 1JVIA 4C45A 4LLGA 1BJTA 4BBSK 3GTOK 2V6TA 1TWAK 5HL8A 3H3VD 4A3LC 1O26A 2E2JK 2A6EA 1IS1A 3FOFA 4BBRC 2NVXK 4A93K 1XZPA 4G7OA 1TWGK 3N0BA 4GT9A 1UV7A 3S2HK 3LAJA 4A3LK 4IOCS 2FQOA 4BBRK 3GTKC 5C4JC 2RGRA 3L4KA 2WB1D 2O5IA 2R7ZA 5HL7S 4WFNS 2JA7C 1KQ4A 3GEHA 5C4JK 1F9NA 1XZPB 5IYBK 3PO3C 3HOWC 3H0GA 1BS2A 2JA7K 3GTMC 3BP8C 2Y3PA 1WOSA 2E2IC 3FHZA 4QJVA 3FKIK 1TWCC 4AYBD 3RZOC 3S15C 3HOWK 2NVQC 4BXXK 1B4BA 2KXYA 1IW7A 3N0CA 5CJ9A 3AH5A 3AQOA 4BLAA 4WJ4A 4A3GC 4C3HC 4P5BA 2E2IK 1TWCK 5C3EK 2ZUEA 3S15K 1TWHA 1GE9A 2NVQK 4A3MC 1B4AA 1TWFA 3PIPS 2P8TA 3S14C 3HXAA 1HI9A 5TMCA 1ZXOA 3AQPA 4QJVB 5JVGS 4XSZA 1IL2A 1WSVA 2CW0A 1I3QK 1F7UA 4IO9S 1ZYRA 4Y52C 5IYDC 3H3VL 3GTPC 4X6AC 3PIOS 1WCMC 3GEEA 3ERED 2P5MA 1Y1VC 1WQGA 5IYDK 3GTPK 4BY1K 3GTKA 1SFOC 2RH6A 4X6AK 2JA6K 4A3KC 2WB1L 2JA5C 4XLPA 2VUMC 1I50C 2V6SA 3GTLC 2E2HC 4A3KK 3AD8C 4KN7A 4GFQA 4KC6A 3GTMA 2VUMK 3AD9C 3GTQC 3GTLK 4AYBL 3OREA 3GIRA 4ILDA 4GTFA 3GTJK 4QIWD 1ZBSA 3CAGA 3GTQK 2BE5A 2FQTA 3BUEA 4BBSC 3CF5S 4M1XA 3GTOC 1Y1WA 1TWAC 2R93K 3CQZK 2E2JC 2NVXC 4A93C 4P9SA 4Q4ZA 4LOWA 1TWGC 3K7AK 3S2HC 4WCES 5JVOA 1ZVUA 5DM6S 2B63A 5HQHA 4PAAA 5C44K 3S1NK 2WAQD 1K83A 4BLBA 2PMZD 1PJ6A 2NVYK 3Q3QA 4XSXA 2PA8D 1YNJA 5D4DA 1ISEA 5JFEA 1WCMA 2EBBA 5IYBC 2GSOA 1Y1VA 1WQFA 1X31C 2O5JA 3VA7A 3QX3A 1SFOA 2GAHC 3FKIC 3HOZK 4A3BC 1O2AA 2JA5A 4BXXC 3G4CA 5TJ3A 1I50A 1R9TA 2YU9C 3S1QK 4A3GK 3DLLS 4KN4A 3HKZD 4LK1A 2E2HA 1YX2A 5JVHS 2R92C 5C3EC 4A3BK 1BGWA 4GZYA 4WF9S 4Y7NC 5C4XK 5FLMK 3NUHA 2YU9K 2ZUFA 3T02A 1DCHA 1WIHA 2R92K 3PO2C 4FM9A 3WODA 1IE0A 4Y7NK 5EGEA 4WJ3M 4C3JK 4QIWL 2XCRB 1J6WA 1I3QC 5DM7S 3GEIA 1WSRA 3GTOA 3PO2K 1TWAA 3GTGC 4GTAA 2NVXA 5FJ8K 4A3FC 3T00A 4A3EK 1AB4A 2L3UA 1TWGA 1EH1A 2W7VA 3S17K 3GTGK 4RMFA 4BY1C 1IQ0A 1WOOA 4KMAA 3BP3A 4A3FK 3S2DK 4A3DK 2JA6C 1XZQA 2WAQL 5M5WK 4KAWX 5IOSA 2PMZL 4GTCA 4XCHA 3I4NC 2PA8L 3HOUC 1VLOA 1FEUA 5CHPA 1RU0A 1VJEA 4GTBA 3LYWA 3I4NK 2JA7A 1DCOA 3HOUK 4LJZA 4KATA 1ZQ1C 1XZQB 3FKIA 4LQYA 1G51A 3FOEA 3S16K 4C3IC 5IP9C 3GTJC 1O25A 5E68A 3HKZL 2E2IA 1INNA 5M5XK 1TWCA 3GSIA 2GSUA 2R93C 2ZFZA 3H0GC 3CQZC 4C3IK 4DDQA 5IP9K 2R7ZK 4YFKA 4P5AA 3K7AC 4WILA 3I4MK 4BY7C 4G0UA 3H0GK 1YNNA 5C44C 1O24A 3TTGA 1I3QA 3S1NC 2Y0SD 3GDZA 4KMHA 1O2BA 4XLNA 5IORA 2NVYC 4BY7K 2XCOA 4KARA 1TWFC 1J98A 4LK0A 4MQ9A 2KWAA 3GTPA 2ZJPS 2PPBA 4G7ZA 1TWHK 2JA6A 3TFHA 1TWFK 1O2FB 1C0AA 3HOZC 4A3CC 4KASA 1XXBA 1VGXA 3HOXC 3S1QC 3OEPA 3M4OK 2A68A 2GSNA 3S1RC 4LR2A 1JQWA 4A3CK 1J6XA 5FLMC 5C4XC 5EGHA 3SZYA 3HOXK 2VUMA 4U67S 3GTLA 3S1RK 4FZBA 3S1MC 3IPJA 1EK8A 4Q5SA 1O29A 1O28A 3GTJA 4ZH4A 2ZJQS 4C3JC 3HOVC 3L4JA 4BKWA 3GTQA 3DXJA 4GTDA 5M5YK 3LAPA 4KMDA 1F93A 3GTKK 3S1MK 3S0XA 2ZJRS 2R93A 3CQZA 4JK1A 1PJ7A 3HOVK 3A8KA 3N3YA 4A3EC 2L5NA 2XCQA 1PJ5A 2GAGC 1V5VA 3HOYC 3S17C 2NVTC 3PO3K 1SMYA 1XXAA 5TMFA 4MEXA 4G0VA 2Y0SL 3S2DC 4A3DC 3GTMK 4KDDA 3V4GA 1WOPA 3TFJA 1DD5A 1F7VA 3HOYK 2NVYA 3A8JA 2NVTK 3RZOK 3T01A 1IBAA 3RZDC 1Y1WC 3ADAC 5IYCC 1WQHA 4GTLA 1JOEA 2KQ1A 1EFWA 2JA8C 4C3HK 1USOA
chains in the Genus database with same CATH topology
5C44K 5M5XK 3EQLA 3S1NK 2JA7K 3RZDK 3GTMC 2WAQD 1Y1WK 2R93C 3H0GC 3CQZC 4C3IK 1HQMA 2PMZD 5IP9K 5IYCK 4A3MK 2B63C 2E2IC 4OIPA 2NVYK 4QJVA 2R7ZK 4MEYA 3FKIK 1TWCC 3S14K 4XSXA 2PA8D 4AYBD 1YNJA 4YFKA 5D4DA 3RZOC 3S15C 1K83C 2JA8K 4OIRA 2NVQC 3K7AC 3S16C 4BXXK 4YG2A 3I4MK 1IW7A 5IYBC 4BY7C 5M3MK 3M3YC 3H0GK 4A3GC 1YNNA 4C2MC 4C3HC 2A69A 2E2IK 2O5JA 2B63K 5C44C 1TWCK 3S1NC 5C3EK 2Y0SD 4YFNA 3S15K 1K83K 4XLNA 2NVQK 4Y52K 4A3MC 2R7ZC 2NVYC 4BY7K 3FKIC 3S14C 3M3YK 5M3FK 3HOZK 4A3BC 4C2MK 5TMCA 4BXXC 4QJVB 4YFXA 3S1QK 1WCMK 2YU9C 1TWFC 3I4MC 4A3GK 4KN4A 3HKZD 4LK0A 4LK1A 4MQ9A 4XSZA 1I6HC 1Y1VK 2CW0A 4KMUA 5IP7C 2R92C 1I3QK 5C3EC 1R9TC 2PPBA 4A3BK 4G7ZA 4GZYA 1TWHK 4Y7NC 5C4XK 1BDFA 5FLMK 1SFOK 1ZYRA 4Y52C 5IYDC 2YU9K 1TWFK 3H3VL 4A3IC 3GTPC 4G7HA 4NOIA 1I6HK 3HOZC 4A3CC 5IP7K 2JA5K 4X6AC 2R92K 3PO2C 3HOXC 1I50K 3S1QC 1WCMC 1R9TK 3M4OK 3WODA 2A68A 4Y7NK 2E2HK 4C3JK 1Y1VC 3S1RC 2A6HA 4QIWL 5IYDK 4A3IK 3GTPK 4OIOA 1I6VA 1I3QC 4BY1K 4A3CK 5FLMC 1TWHC 5C4XC 1SFOC 4X6AK 4A3JC 2JA6K 3PO2K 3HOXK 4A3KC 3GTGC 2WB1L 3S1RK 5FJ8K 4A3FC 2JA5C 3S1MC 4XLPA 4A3EK 2VUMC 1I50C 4OIQA 4Q5SA 3M4OC 3GTLC 1XPPA 4ZH4A 2E2HC 3HOVC 4C3JC 4A3JK 4OINA 3S17K 4A3KK 4KN7A 3DXJA 3GTGK 5M5YK 4BY1C 4LLGA 4A3FK 4BBSK 3GTKK 3S1MK 3GTOK 3S2DK 4A3DK 2JA6C 1TWAK 2WAQL 5M5WK 3H3VD 4A3LC 2VUMK 3GTQC 2E2JK 3GTLK 4JK1A 2PMZL 3HOVK 2A6EA 2NVXK 4BBRC 4A93K 3I4NC 2PA8L 4AYBL 4A3EC 4G7OA 3HOUC 1TWGK 3GTJK 3S2HK 3HOYC 3S17C 4QIWD 4A3LK 2NVTC 3PO3K 3GTQK 1SMYA 2BE5A 5TMFA 4MEXA 4BBRK 4BBSC 3GTKC 3I4NK 3GTOC 2Y0SL 3S2DC 5C4JC 4A3DC 1TWAC 3GTMK 4LJZA 3HOUK 2R93K 3CQZK 2E2JC 2WB1D 2O5IA 3HOYK 2NVXC 2NVTK 4A93C 3RZOK 2JA7C 4Q4ZA 3RZDC 1Y1WC 3HOWK 1TWGC 3K7AK 3S16K 4C3IC 5IYCC 5IP9C 3GTJC 3S2HC 5C4JK 5IYBK 3PO3C 3HOWC 2JA8C 3HKZL 4C3HK
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5C44 K;  5M5X K;  3EQL A;  3S1N K;  2JA7 K;  3RZD K;  3GTM C;  2WAQ D;  1Y1W K;  2R93 C;  3H0G C;  3CQZ C;  4C3I K;  1HQM A;  2PMZ D;  5IP9 K;  5IYC K;  4A3M K;  2B63 C;  2E2I C;  4OIP A;  2NVY K;  4QJV A;  2R7Z K;  4MEY A;  3FKI K;  1TWC C;  3S14 K;  4XSX A;  2PA8 D;  4AYB D;  1YNJ A;  4YFK A;  5D4D A;  3RZO C;  3S15 C;  1K83 C;  2JA8 K;  4OIR A;  2NVQ C;  3K7A C;  3S16 C;  4BXX K;  4YG2 A;  3I4M K;  1IW7 A;  5IYB C;  4BY7 C;  5M3M K;  3M3Y C;  3H0G K;  4A3G C;  1YNN A;  4C2M C;  4C3H C;  2A69 A;  2E2I K;  2O5J A;  2B63 K;  5C44 C;  1TWC K;  3S1N C;  5C3E K;  2Y0S D;  4YFN A;  3S15 K;  1K83 K;  4XLN A;  2NVQ K;  4Y52 K;  4A3M C;  2R7Z C;  2NVY C;  4BY7 K;  3FKI C;  3S14 C;  3M3Y K;  5M3F K;  3HOZ K;  4A3B C;  4C2M K;  5TMC A;  4BXX C;  4QJV B;  4YFX A;  3S1Q K;  1WCM K;  2YU9 C;  1TWF C;  3I4M C;  4A3G K;  4KN4 A;  3HKZ D;  4LK0 A;  4LK1 A;  4MQ9 A;  4XSZ A;  1I6H C;  1Y1V K;  2CW0 A;  4KMU A;  5IP7 C;  2R92 C;  1I3Q K;  5C3E C;  1R9T C;  2PPB A;  4A3B K;  4G7Z A;  4GZY A;  1TWH K;  4Y7N C;  5C4X K;  1BDF A;  5FLM K;  1SFO K;  1ZYR A;  4Y52 C;  5IYD C;  2YU9 K;  1TWF K;  3H3V L;  4A3I C;  3GTP C;  4G7H A;  4NOI A;  1I6H K;  3HOZ C;  4A3C C;  5IP7 K;  2JA5 K;  4X6A C;  2R92 K;  3PO2 C;  3HOX C;  1I50 K;  3S1Q C;  1WCM C;  1R9T K;  3M4O K;  3WOD A;  2A68 A;  4Y7N K;  2E2H K;  4C3J K;  1Y1V C;  3S1R C;  2A6H A;  4QIW L;  5IYD K;  4A3I K;  3GTP K;  4OIO A;  1I6V A;  1I3Q C;  4BY1 K;  4A3C K;  5FLM C;  1TWH C;  5C4X C;  1SFO C;  4X6A K;  4A3J C;  2JA6 K;  3PO2 K;  3HOX K;  4A3K C;  3GTG C;  2WB1 L;  3S1R K;  5FJ8 K;  4A3F C;  2JA5 C;  3S1M C;  4XLP A;  4A3E K;  2VUM C;  1I50 C;  4OIQ A;  4Q5S A;  3M4O C;  3GTL C;  1XPP A;  4ZH4 A;  2E2H C;  3HOV C;  4C3J C;  4A3J K;  4OIN A;  3S17 K;  4A3K K;  4KN7 A;  3DXJ A;  3GTG K;  5M5Y K;  4BY1 C;  4LLG A;  4A3F K;  4BBS K;  3GTK K;  3S1M K;  3GTO K;  3S2D K;  4A3D K;  2JA6 C;  1TWA K;  2WAQ L;  5M5W K;  3H3V D;  4A3L C;  2VUM K;  3GTQ C;  2E2J K;  3GTL K;  4JK1 A;  2PMZ L;  3HOV K;  2A6E A;  2NVX K;  4BBR C;  4A93 K;  3I4N C;  2PA8 L;  4AYB L;  4A3E C;  4G7O A;  3HOU C;  1TWG K;  3GTJ K;  3S2H K;  3HOY C;  3S17 C;  4QIW D;  4A3L K;  2NVT C;  3PO3 K;  3GTQ K;  1SMY A;  2BE5 A;  5TMF A;  4MEX A;  4BBR K;  4BBS C;  3GTK C;  3I4N K;  3GTO C;  2Y0S L;  3S2D C;  5C4J C;  4A3D C;  1TWA C;  3GTM K;  4LJZ A;  3HOU K;  2R93 K;  3CQZ K;  2E2J C;  2WB1 D;  2O5I A;  3HOY K;  2NVX C;  2NVT K;  4A93 C;  3RZO K;  2JA7 C;  4Q4Z A;  3RZD C;  1Y1W C;  3HOW K;  1TWG C;  3K7A K;  3S16 K;  4C3I C;  5IYC C;  5IP9 C;  3GTJ C;  3S2H C;  5C4J K;  5IYB K;  3PO3 C;  3HOW C;  2JA8 C;  3HKZ L;  4C3H K; 
#chains in the Genus database with same CATH topology
 3EQL A;  4KB4 A;  1EI6 A;  3RZD K;  1Y1W K;  1HQM A;  5IYC K;  4A3M K;  2B63 C;  4OIP A;  4WFB S;  4MEY A;  3S14 K;  2JA8 K;  1K83 C;  3JST A;  4OIR A;  3S16 C;  1DCP A;  1O27 A;  4YG2 A;  4WFA S;  4KM9 A;  1VH2 A;  5M3M K;  3A8I A;  3AD7 C;  3M3Y C;  3OPF A;  1YCL A;  4C2M C;  5IOQ A;  2A69 A;  2B63 K;  5L46 A;  4YFN A;  2D6F C;  1K83 K;  4Y52 K;  1VRQ C;  2YU9 A;  2R7Z C;  3M3Y K;  4KB2 A;  5M3F K;  4C2M K;  3G4A A;  3TFI A;  2V6U A;  3LPX A;  2R92 A;  4YFX A;  1USM A;  1WCM K;  3I4M C;  2KPU A;  4IOA S;  1I6H C;  1Y1V K;  4KMU A;  5IP7 C;  2CFA A;  3MML B;  1R9T C;  2PHC B;  1BDF A;  1SFO K;  1EQR A;  4G0W A;  4A3I C;  4G7H A;  4NOI A;  1L0W A;  4AH6 A;  1I6H K;  4J3N A;  1XXC A;  1J6V A;  5IP7 K;  2JA5 K;  1I50 K;  1R9T K;  2E2H K;  2A6H A;  4A3I K;  3GTG A;  4OIO A;  1I6V A;  1TWH C;  4A3J C;  2CFA B;  4PAB A;  2JH3 A;  5IOT A;  4OIQ A;  3SZZ A;  3M4O C;  4KM8 A;  1XPP A;  4O2D A;  4A3J K;  4OIN A;  4GTE A;  1WOR A;  1JVI A;  4C45 A;  4LLG A;  1BJT A;  4BBS K;  3GTO K;  2V6T A;  1TWA K;  5HL8 A;  3H3V D;  4A3L C;  1O26 A;  2E2J K;  2A6E A;  1IS1 A;  3FOF A;  4BBR C;  2NVX K;  4A93 K;  1XZP A;  4G7O A;  1TWG K;  3N0B A;  4GT9 A;  1UV7 A;  3S2H K;  3LAJ A;  4A3L K;  4IOC S;  2FQO A;  4BBR K;  3GTK C;  5C4J C;  2RGR A;  3L4K A;  2WB1 D;  2O5I A;  2R7Z A;  5HL7 S;  4WFN S;  2JA7 C;  1KQ4 A;  3GEH A;  5C4J K;  1F9N A;  1XZP B;  5IYB K;  3PO3 C;  3HOW C;  3H0G A;  1BS2 A;  2JA7 K;  3GTM C;  3BP8 C;  2Y3P A;  1WOS A;  2E2I C;  3FHZ A;  4QJV A;  3FKI K;  1TWC C;  4AYB D;  3RZO C;  3S15 C;  3HOW K;  2NVQ C;  4BXX K;  1B4B A;  2KXY A;  1IW7 A;  3N0C A;  5CJ9 A;  3AH5 A;  3AQO A;  4BLA A;  4WJ4 A;  4A3G C;  4C3H C;  4P5B A;  2E2I K;  1TWC K;  5C3E K;  2ZUE A;  3S15 K;  1TWH A;  1GE9 A;  2NVQ K;  4A3M C;  1B4A A;  1TWF A;  3PIP S;  2P8T A;  3S14 C;  3HXA A;  1HI9 A;  5TMC A;  1ZXO A;  3AQP A;  4QJV B;  5JVG S;  4XSZ A;  1IL2 A;  1WSV A;  2CW0 A;  1I3Q K;  1F7U A;  4IO9 S;  1ZYR A;  4Y52 C;  5IYD C;  3H3V L;  3GTP C;  4X6A C;  3PIO S;  1WCM C;  3GEE A;  3ERE D;  2P5M A;  1Y1V C;  1WQG A;  5IYD K;  3GTP K;  4BY1 K;  3GTK A;  1SFO C;  2RH6 A;  4X6A K;  2JA6 K;  4A3K C;  2WB1 L;  2JA5 C;  4XLP A;  2VUM C;  1I50 C;  2V6S A;  3GTL C;  2E2H C;  4A3K K;  3AD8 C;  4KN7 A;  4GFQ A;  4KC6 A;  3GTM A;  2VUM K;  3AD9 C;  3GTQ C;  3GTL K;  4AYB L;  3ORE A;  3GIR A;  4ILD A;  4GTF A;  3GTJ K;  4QIW D;  1ZBS A;  3CAG A;  3GTQ K;  2BE5 A;  2FQT A;  3BUE A;  4BBS C;  3CF5 S;  4M1X A;  3GTO C;  1Y1W A;  1TWA C;  2R93 K;  3CQZ K;  2E2J C;  2NVX C;  4A93 C;  4P9S A;  4Q4Z A;  4LOW A;  1TWG C;  3K7A K;  3S2H C;  4WCE S;  5JVO A;  1ZVU A;  5DM6 S;  2B63 A;  5HQH A;  4PAA A;  5C44 K;  3S1N K;  2WAQ D;  1K83 A;  4BLB A;  2PMZ D;  1PJ6 A;  2NVY K;  3Q3Q A;  4XSX A;  2PA8 D;  1YNJ A;  5D4D A;  1ISE A;  5JFE A;  1WCM A;  2EBB A;  5IYB C;  2GSO A;  1Y1V A;  1WQF A;  1X31 C;  2O5J A;  3VA7 A;  3QX3 A;  1SFO A;  2GAH C;  3FKI C;  3HOZ K;  4A3B C;  1O2A A;  2JA5 A;  4BXX C;  3G4C A;  5TJ3 A;  1I50 A;  1R9T A;  2YU9 C;  3S1Q K;  4A3G K;  3DLL S;  4KN4 A;  3HKZ D;  4LK1 A;  2E2H A;  1YX2 A;  5JVH S;  2R92 C;  5C3E C;  4A3B K;  1BGW A;  4GZY A;  4WF9 S;  4Y7N C;  5C4X K;  5FLM K;  3NUH A;  2YU9 K;  2ZUF A;  3T02 A;  1DCH A;  1WIH A;  2R92 K;  3PO2 C;  4FM9 A;  3WOD A;  1IE0 A;  4Y7N K;  5EGE A;  4WJ3 M;  4C3J K;  4QIW L;  2XCR B;  1J6W A;  1I3Q C;  5DM7 S;  3GEI A;  1WSR A;  3GTO A;  3PO2 K;  1TWA A;  3GTG C;  4GTA A;  2NVX A;  5FJ8 K;  4A3F C;  3T00 A;  4A3E K;  1AB4 A;  2L3U A;  1TWG A;  1EH1 A;  2W7V A;  3S17 K;  3GTG K;  4RMF A;  4BY1 C;  1IQ0 A;  1WOO A;  4KMA A;  3BP3 A;  4A3F K;  3S2D K;  4A3D K;  2JA6 C;  1XZQ A;  2WAQ L;  5M5W K;  4KAW X;  5IOS A;  2PMZ L;  4GTC A;  4XCH A;  3I4N C;  2PA8 L;  3HOU C;  1VLO A;  1FEU A;  5CHP A;  1RU0 A;  1VJE A;  4GTB A;  3LYW A;  3I4N K;  2JA7 A;  1DCO A;  3HOU K;  4LJZ A;  4KAT A;  1ZQ1 C;  1XZQ B;  3FKI A;  4LQY A;  1G51 A;  3FOE A;  3S16 K;  4C3I C;  5IP9 C;  3GTJ C;  1O25 A;  5E68 A;  3HKZ L;  2E2I A;  1INN A;  5M5X K;  1TWC A;  3GSI A;  2GSU A;  2R93 C;  2ZFZ A;  3H0G C;  3CQZ C;  4C3I K;  4DDQ A;  5IP9 K;  2R7Z K;  4YFK A;  4P5A A;  3K7A C;  4WIL A;  3I4M K;  4BY7 C;  4G0U A;  3H0G K;  1YNN A;  5C44 C;  1O24 A;  3TTG A;  1I3Q A;  3S1N C;  2Y0S D;  3GDZ A;  4KMH A;  1O2B A;  4XLN A;  5IOR A;  2NVY C;  4BY7 K;  2XCO A;  4KAR A;  1TWF C;  1J98 A;  4LK0 A;  4MQ9 A;  2KWA A;  3GTP A;  2ZJP S;  2PPB A;  4G7Z A;  1TWH K;  2JA6 A;  3TFH A;  1TWF K;  1O2F B;  1C0A A;  3HOZ C;  4A3C C;  4KAS A;  1XXB A;  1VGX A;  3HOX C;  3S1Q C;  3OEP A;  3M4O K;  2A68 A;  2GSN A;  3S1R C;  4LR2 A;  1JQW A;  4A3C K;  1J6X A;  5FLM C;  5C4X C;  5EGH A;  3SZY A;  3HOX K;  2VUM A;  4U67 S;  3GTL A;  3S1R K;  4FZB A;  3S1M C;  3IPJ A;  1EK8 A;  4Q5S A;  1O29 A;  1O28 A;  3GTJ A;  4ZH4 A;  2ZJQ S;  4C3J C;  3HOV C;  3L4J A;  4BKW A;  3GTQ A;  3DXJ A;  4GTD A;  5M5Y K;  3LAP A;  4KMD A;  1F93 A;  3GTK K;  3S1M K;  3S0X A;  2ZJR S;  2R93 A;  3CQZ A;  4JK1 A;  1PJ7 A;  3HOV K;  3A8K A;  3N3Y A;  4A3E C;  2L5N A;  2XCQ A;  1PJ5 A;  2GAG C;  1V5V A;  3HOY C;  3S17 C;  2NVT C;  3PO3 K;  1SMY A;  1XXA A;  5TMF A;  4MEX A;  4G0V A;  2Y0S L;  3S2D C;  4A3D C;  3GTM K;  4KDD A;  3V4G A;  1WOP A;  3TFJ A;  1DD5 A;  1F7V A;  3HOY K;  2NVY A;  3A8J A;  2NVT K;  3RZO K;  3T01 A;  1IBA A;  3RZD C;  1Y1W C;  3ADA C;  5IYC C;  1WQH A;  4GTL A;  1JOE A;  2KQ1 A;  1EFW A;  2JA8 C;  4C3H K;  1USO A; 
#chains in the Genus database with same CATH homology
 5C44 K;  5M5X K;  3EQL A;  3S1N K;  2JA7 K;  3RZD K;  3GTM C;  2WAQ D;  1Y1W K;  2R93 C;  3H0G C;  3CQZ C;  4C3I K;  1HQM A;  2PMZ D;  5IP9 K;  5IYC K;  4A3M K;  2B63 C;  2E2I C;  4OIP A;  2NVY K;  4QJV A;  2R7Z K;  4MEY A;  3FKI K;  1TWC C;  3S14 K;  4XSX A;  2PA8 D;  4AYB D;  1YNJ A;  4YFK A;  5D4D A;  3RZO C;  3S15 C;  1K83 C;  2JA8 K;  4OIR A;  2NVQ C;  3K7A C;  3S16 C;  4BXX K;  4YG2 A;  3I4M K;  1IW7 A;  5IYB C;  4BY7 C;  5M3M K;  3M3Y C;  3H0G K;  4A3G C;  1YNN A;  4C2M C;  4C3H C;  2A69 A;  2E2I K;  2O5J A;  2B63 K;  5C44 C;  1TWC K;  3S1N C;  5C3E K;  2Y0S D;  4YFN A;  3S15 K;  1K83 K;  4XLN A;  2NVQ K;  4Y52 K;  4A3M C;  2R7Z C;  2NVY C;  4BY7 K;  3FKI C;  3S14 C;  3M3Y K;  5M3F K;  3HOZ K;  4A3B C;  4C2M K;  5TMC A;  4BXX C;  4QJV B;  4YFX A;  3S1Q K;  1WCM K;  2YU9 C;  1TWF C;  3I4M C;  4A3G K;  4KN4 A;  3HKZ D;  4LK0 A;  4LK1 A;  4MQ9 A;  4XSZ A;  1I6H C;  1Y1V K;  2CW0 A;  4KMU A;  5IP7 C;  2R92 C;  1I3Q K;  5C3E C;  1R9T C;  2PPB A;  4A3B K;  4G7Z A;  4GZY A;  1TWH K;  4Y7N C;  5C4X K;  1BDF A;  5FLM K;  1SFO K;  1ZYR A;  4Y52 C;  5IYD C;  2YU9 K;  1TWF K;  3H3V L;  4A3I C;  3GTP C;  4G7H A;  4NOI A;  1I6H K;  3HOZ C;  4A3C C;  5IP7 K;  2JA5 K;  4X6A C;  2R92 K;  3PO2 C;  3HOX C;  1I50 K;  3S1Q C;  1WCM C;  1R9T K;  3M4O K;  3WOD A;  2A68 A;  4Y7N K;  2E2H K;  4C3J K;  1Y1V C;  3S1R C;  2A6H A;  4QIW L;  5IYD K;  4A3I K;  3GTP K;  4OIO A;  1I6V A;  1I3Q C;  4BY1 K;  4A3C K;  5FLM C;  1TWH C;  5C4X C;  1SFO C;  4X6A K;  4A3J C;  2JA6 K;  3PO2 K;  3HOX K;  4A3K C;  3GTG C;  2WB1 L;  3S1R K;  5FJ8 K;  4A3F C;  2JA5 C;  3S1M C;  4XLP A;  4A3E K;  2VUM C;  1I50 C;  4OIQ A;  4Q5S A;  3M4O C;  3GTL C;  1XPP A;  4ZH4 A;  2E2H C;  3HOV C;  4C3J C;  4A3J K;  4OIN A;  3S17 K;  4A3K K;  4KN7 A;  3DXJ A;  3GTG K;  5M5Y K;  4BY1 C;  4LLG A;  4A3F K;  4BBS K;  3GTK K;  3S1M K;  3GTO K;  3S2D K;  4A3D K;  2JA6 C;  1TWA K;  2WAQ L;  5M5W K;  3H3V D;  4A3L C;  2VUM K;  3GTQ C;  2E2J K;  3GTL K;  4JK1 A;  2PMZ L;  3HOV K;  2A6E A;  2NVX K;  4BBR C;  4A93 K;  3I4N C;  2PA8 L;  4AYB L;  4A3E C;  4G7O A;  3HOU C;  1TWG K;  3GTJ K;  3S2H K;  3HOY C;  3S17 C;  4QIW D;  4A3L K;  2NVT C;  3PO3 K;  3GTQ K;  1SMY A;  2BE5 A;  5TMF A;  4MEX A;  4BBR K;  4BBS C;  3GTK C;  3I4N K;  3GTO C;  2Y0S L;  3S2D C;  5C4J C;  4A3D C;  1TWA C;  3GTM K;  4LJZ A;  3HOU K;  2R93 K;  3CQZ K;  2E2J C;  2WB1 D;  2O5I A;  3HOY K;  2NVX C;  2NVT K;  4A93 C;  3RZO K;  2JA7 C;  4Q4Z A;  3RZD C;  1Y1W C;  3HOW K;  1TWG C;  3K7A K;  3S16 K;  4C3I C;  5IYC C;  5IP9 C;  3GTJ C;  3S2H C;  5C4J K;  5IYB K;  3PO3 C;  3HOW C;  2JA8 C;  3HKZ L;  4C3H K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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