3HOZC

Complete rna polymerase ii elongation complex iv with a t-u mismatch and a frayed rna 3'-guanine
Total Genus 52
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
52
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural basis of transcription: mismatch-specific fidelity mechanisms and paused RNA polymerase II with frayed RNA.
pubmed doi rcsb
molecule tags Transcription,transferase/dna/rna hybrid
molecule keywords DNA-directed RNA polymerase II subunit RPB1
total genus 52
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2009-06-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3hozC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3hozC01
1TWFC 2WAQD 2Y0SD 4QIWD 2O5IA 4KN7A 2PA8D 4A3JC 2JA8K 3PO2K 1YNJA 4OIPA 3S2DK 4QJVA 2O5JA 4ZH4A 1R9TK 3H3VL 4OIRA 2A69A 4A3DK 2E2IC 3S14K 2A68A 4YFXA 2Y0SL 2CW0A 2JA5K 2NVXK 5C44K 2B63K 3H0GC 1I50K 2A6EA 1YNNA 4BBRC 4A3IC 3I4MC 1I3QK 2YU9K 4A3BK 4C3JC 1I6VA 4A3MC 3DXJA 3HOVK 4OIOA 4A3KK 4BY7K 5IYBK 3GTLK 1BDFA 5C44C 2B63C 2NVTK 3FKIC 4A93K 3CQZC 5IYDK 1TWGK 4BXXK 2PMZD 4C3JK 3I4NK 3S1RK 4AYBD 2JA5C 3K7AC 5M3FK 3GTOC 1K83K 4A3GK 5IYBC 4MEXA 3HOUK 3RZOK 3GTGK 4A3FK 4Q5SA 1SMYA 4A3CC 4XSZA 1R9TC 2PMZL 4QJVB 4C3HC 1I50C 4LJZA 2WAQL 3H0GK 4Q4ZA 4A3FC 4A3BC 5IP9C 3HOXC 3GTPC 4A3LC 3GTJK 3I4MK 3S17K 3S1MC 1Y1WK 5C3EC 1TWHC 3FKIK 3HKZL 4G7OA 4BBSC 4A3DC 1SFOK 4G7ZA 3GTJC 3HOXK 4C3IC 3GTPK 4A3LK 3S2DC 4Y52K 2VUMK 3S1QK 4XLNA 4C3HK 3S16C 4A3EK 3S15K 4XSXA 4YFKA 1I6HC 3GTKK 5FJ8K 2E2JC 4LK1A 3GTQC 5M5XK 5IYCK 4C2MC 3M4OK 5TMCA 2BE5A 1Y1WC 3GTMC 2R93K 5IP7C 3RZDK 3HOYK 2JA6C 1TWGC 3H3VD 4BXXC 5M5YK 5C4JC 3HOWK 2VUMC 4GZYA 4LK0A 4XLPA 4A3EC 3GTLC 4X6AC 4QIWL 4Y7NC 2R93C 3PO3C 4NOIA 3S1NC 1TWAK 4C2MK 2R92K 1TWHK 2NVQC 3S1MK 1ZYRA 4OINA 2JA7K 2R7ZK 3S16K 4YFNA 4A93C 4OIQA 5M5WK 1TWCK 1WCMK 2NVYC 5D4DA 4C3IK 5FLMK 3M4OC 4Y7NK 3GTQK 2E2IK 3S1QC 3PO3K 2E2HK 2WB1L 1TWFK 1Y1VK 4BY1K 3RZDC 4A3IK 1XPPA 1HQMA 2A6HA 2NVYK 4LLGA 3S2HK 4KN4A 3GTMK 5IYDC 3M3YC 2JA7C 3WODA 2R7ZC 4X6AK 5IP9K 2WB1D 4MQ9A 3GTKC 2E2JK 4AYBL 5TMFA 2NVTC 1TWAC 3S1NK 3CQZK 2JA6K 2E2HC 4Y52C 4JK1A 3PO2C 3HOWC 5C4JK 5IP7K 4A3GC 1SFOC 5M3MK 3EQLA 4A3MK 4MEYA 5IYCC 2NVQK 3HOZC 4G7HA 5C4XC 2R92C 4KMUA 3S14C 4BBRK 2PA8L 1I6HK 2NVXC 3HOVC 4A3CK 3HKZD 4A3KC 3HOYC 4BY7C 2JA8C 1I3QC 2YU9C 1WCMC 1TWCC 5FLMC 3GTGC 3HOUC 3RZOC 3S15C 3S2HC 4A3JK 4BBSK 2PPBA 3K7AK 1IW7A 1K83C 5C4XK 3GTOK 5C3EK 3HOZK 3I4NC 3S1RC 1Y1VC 4BY1C 3M3YK 4YG2A 3S17C
chains in the Genus database with same CATH superfamily
4KN7A 4A3JC 3PO2K 2ZFZA 3GTOA 3GEIA 4WFNS 2O5JA 4GTLA 4ZH4A 4OIRA 1IQ0A 3V4GA 5JVHS 1PJ7A 2B63K 1YNNA 4A3IC 3I4MC 4A3BK 2FQTA 4KB4A 3HOVK 3AD8C 1BS2A 2NVTK 3FKIC 3CQZC 1TWGK 1PJ6A 2PMZD 4J3NA 2GAHC 2P8TA 2W7VA 2XCRB 3T01A 3ERED 4Q5SA 1WIHA 4KM8A 2PMZL 4C3HC 4KB2A 4A3BC 4A3FC 3I4MK 3S17K 4A3LC 1Y1VA 3GTJK 3VA7A 1XZQA 3A8KA 5C3EC 4M1XA 4A3DC 4KAWX 1EK8A 1DCOA 3BP3A 2VUMK 4XLNA 4A3EK 1ZXOA 2GSUA 3G4AA 4YFKA 1I6HC 2D6FC 3N3YA 2Y3PA 3AD9C 3HOYK 1WQFA 2JA6C 3H3VD 2R93A 2VUMC 4GZYA 4LK0A 4A3EC 2GSNA 1WOPA 1VJEA 1TWAK 1JVIA 1GE9A 4BLBA 1ZYRA 1USMA 4YFNA 4IO9S 1TWCK 5FLMK 3PO3K 2P5MA 4C3IK 3M4OC 3GTQK 2E2IK 2KXYA 5CHPA 1AB4A 3N0CA 1WORA 4GT9A 2E2JK 1O2BA 1TWAC 2E2HC 4Y52C 3PO2C 3GEEA 3HOWC 4KATA 5C4JK 4A3GC 1O28A 2R92C 1I6HK 1IBAA 1I3QA 1B4BA 2JA5A 3HKZD 1EFWA 4LR2A 4A3KC 4BY7C 1TWFK 2YU9C 1WCMC 3GTGC 1WSVA 1O2AA 1K83C 3HOZK 1J6WA 1JOEA 1V5VA 1Y1VC 3M3YK 5IYDK 3FKIK 4YG2A 3S17C 4A3FK 2Y0SD 2WAQD 3S15K 4FM9A 1YNJA 4QJVA 3FOEA 2E2IC 2CFAB 4KMDA 5TJ3A 3Q3QA 2Y0SL 2NVXK 1HI9A 5C44K 2ZJPS 3H0GC 2A6EA 4BBRC 2YU9K 1XZPA 5IYBK 3N0BA 3GTLK 1BDFA 2B63C 3GTLA 1UV7A 1WQHA 3K7AC 3GTOC 4A3GK 3OPFA 5IYBC 1WOSA 3GTMA 3OREA 2WAQL 1KQ4A 3H0GK 4LQYA 5IP9C 3HOXC 3GTPC 4XCHA 3T00A 4KASA 1PJ5A 4KARA 3S1MC 4BLAA 1Y1WK 3TTGA 1WCMA 2L3UA 4G7OA 3FKIA 3G4CA 4G7ZA 2JA7A 3GTJC 3CAGA 4C3IC 3NUHA 4A3LK 3S2DC 1TWHA 2R92A 4C3HK 4WJ4A 3GTKK 5FJ8K 2E2JC 4LK1A 3GTQC 3M4OK 4C2MC 5TMCA 1J6XA 1Y1WC 4GTAA 5IP7C 4KM9A 4X6AC 1O24A 4QIWL 5L46A 3GTKA 2V6SA 3S1NC 2GSOA 3A8IA 1TWHK 2R92K 2JA7K 4OIQA 1WCMK 1O2FB 4WF9S 1Y1WA 3TFHA 2WB1L 5E68A 1J98A 4BY1K 1IL2A 2L5NA 3H0GA 1INNA 2A6HA 3GTMK 1IS1A 2JA7C 3WODA 2E2IA 4X6AK 1EQRA 2WB1D 4RMFA 3S1NK 3ADAC 4JK1A 3DLLS 1TWAA 5M3MK 1XZPB 4MEYA 5IYCC 3L4KA 1WOOA 4BBRK 4LOWA 2NVXC 2YU9A 3HOVC 2NVXA 4A3CK 1L0WA 3HOYC 2JA8C 1I3QC 4ILDA 4P5BA 2ZUFA 4BBSK 3S2HC 3K7AK 1TWFC 1O29A 4QIWD 2O5IA 2GAGC 4DDQA 2PA8D 4OIPA 1TWFA 4A3DK 4PAAA 4AH6A 2A68A 3S14K 4YFXA 4KC6A 2CW0A 2JA5K 5DM6S 3GDZA 5JFEA 1I3QK 4C3JC 1I6VA 2ZJRS 1VGXA 3GSIA 4C45A 3SZYA 5HL7S 3TFJA 1F7UA 1USOA 5C44C 4A93K 3S1RK 5M3FK 3LPXA 2RGRA 1XZQB 4MEXA 3HOUK 3RZOK 4U67S 1O26A 1F9NA 1SMYA 1R9TC 4QJVB 3FOFA 2KPUA 3GTQA 3BUEA 1XXAA 1TWCA 3HKZL 5HL8A 3S0XA 1SFOK 3HOXK 3GTPK 4Y52K 4PABA 1JQWA 4FZBA 3GTMC 2R93K 3FHZA 1DCHA 4BXXC 1BJTA 1FEUA 5C4JC 3HOWK 3GTLC 4GTFA 1ZQ1C 4NOIA 1X31C 4C2MK 2VUMA 3S16K 4A93C 5M5WK 2CFAA 2NVYC 1DCPA 1O25A 3AH5A 3S1QC 1Y1VK 3GTJA 1G51A 3SZZA 3RZDC 4A3IK 1XPPA 1HQMA 2NVYK 5IYDC 3M3YC 2XCQA 5IP9K 4MQ9A 5CJ9A 4AYBL 1RU0A 2NVTC 3CQZK 2JA6K 3CF5S 2KQ1A 3AQOA 1TWGA 3GIRA 1EI6A 3IPJA 2NVQK 5C4XC 4G7HA 3S14C 1B4AA 2PA8L 5IOQA 2ZJQS 1ISEA 5JVOA 2B63A 1C0AA 3BP8C 3HOUC 3RZOC 4A3JK 2PPBA 1IW7A 4P5AA 3GTOK 5C3EK 1VRQC 3HXAA 2JA8K 1XXBA 3S2DK 5EGHA 4GTDA 4O2DA 1R9TK 3H3VL 2A69A 2EBBA 5IORA 1I50K 3GTGA 4A3MC 3DXJA 1EH1A 4OIOA 1K83A 4A3KK 4BY7K 2V6UA 4G0VA 4IOCS 4BXXK 3AQPA 4C3JK 3I4NK 4AYBD 2JA5C 1K83K 4WCES 3TFIA 5IOSA 4GTEA 1F7VA 3GTGK 1WQGA 1I50A 1VH2A 4WFAS 4A3CC 4KMAA 4XSZA 1I50C 4LJZA 4Q4ZA 1R9TA 3LYWA 5HQHA 2E2HA 1XXCA 1F93A 1TWHC 2FQOA 5EGEA 4BBSC 3A8JA 2R7ZA 1VLOA 5IOTA 3S1QK 3S16C 4XSXA 3OEPA 4G0WA 4WJ3M 3L4JA 1YX2A 5M5XK 1O27A 3MMLB 5IYCK 2BE5A 4WFBS 3PIOS 4WILA 3RZDK 1TWGC 5M5YK 1IE0A 4P9SA 4IOAS 5JVGS 4XLPA 4Y7NC 2R93C 3PO3C 1J6VA 3T02A 2NVQC 3S1MK 4OINA 2RH6A 2R7ZK 3CQZA 2JA6A 3QX3A 2XCOA 4GFQA 4Y7NK 5D4DA 2E2HK 2PHCB 3GEHA 2NVYA 3LAJA 4LLGA 3S2HK 4KN4A 2R7ZC 1DD5A 5DM7S 3GTKC 3JSTA 5TMFA 5IP7K 1SFOC 3EQLA 4GTBA 4A3MK 1BGWA 3PIPS 1ZVUA 3HOZC 4KMUA 1WSRA 4GTCA 2ZUEA 4KMHA 2V6TA 1YCLA 3AD7C 2JH3A 4BKWA 4KDDA 3S15C 1ZBSA 2KWAA 1TWCC 5FLMC 5C4XK 3I4NC 3S1RC 4G0UA 4BY1C 3GTPA 3LAPA 1SFOA
chains in the Genus database with same CATH topology
1TWFC 2WAQD 2Y0SD 4QIWD 2O5IA 4KN7A 2PA8D 4A3JC 2JA8K 3PO2K 1YNJA 4OIPA 3S2DK 4QJVA 2O5JA 4ZH4A 1R9TK 3H3VL 4OIRA 2A69A 4A3DK 2E2IC 3S14K 2A68A 4YFXA 2Y0SL 2CW0A 2JA5K 2NVXK 5C44K 2B63K 3H0GC 1I50K 2A6EA 1YNNA 4BBRC 4A3IC 3I4MC 1I3QK 2YU9K 4A3BK 4C3JC 1I6VA 4A3MC 3DXJA 3HOVK 4OIOA 4A3KK 4BY7K 5IYBK 3GTLK 1BDFA 5C44C 2B63C 2NVTK 3FKIC 4A93K 3CQZC 5IYDK 1TWGK 4BXXK 2PMZD 4C3JK 3I4NK 3S1RK 4AYBD 2JA5C 3K7AC 5M3FK 3GTOC 1K83K 4A3GK 5IYBC 4MEXA 3HOUK 3RZOK 3GTGK 4A3FK 4Q5SA 1SMYA 4A3CC 4XSZA 1R9TC 2PMZL 4QJVB 4C3HC 1I50C 4LJZA 2WAQL 3H0GK 4Q4ZA 4A3FC 4A3BC 5IP9C 3HOXC 3GTPC 4A3LC 3GTJK 3I4MK 3S17K 3S1MC 1Y1WK 5C3EC 1TWHC 3FKIK 3HKZL 4G7OA 4BBSC 4A3DC 1SFOK 4G7ZA 3GTJC 3HOXK 4C3IC 3GTPK 4A3LK 3S2DC 4Y52K 2VUMK 3S1QK 4XLNA 4C3HK 3S16C 4A3EK 3S15K 4XSXA 4YFKA 1I6HC 3GTKK 5FJ8K 2E2JC 4LK1A 3GTQC 5M5XK 5IYCK 4C2MC 3M4OK 5TMCA 2BE5A 1Y1WC 3GTMC 2R93K 5IP7C 3RZDK 3HOYK 2JA6C 1TWGC 3H3VD 4BXXC 5M5YK 5C4JC 3HOWK 2VUMC 4GZYA 4LK0A 4XLPA 4A3EC 3GTLC 4X6AC 4QIWL 4Y7NC 2R93C 3PO3C 4NOIA 3S1NC 1TWAK 4C2MK 2R92K 1TWHK 2NVQC 3S1MK 1ZYRA 4OINA 2JA7K 2R7ZK 3S16K 4YFNA 4A93C 4OIQA 5M5WK 1TWCK 1WCMK 2NVYC 5D4DA 4C3IK 5FLMK 3M4OC 4Y7NK 3GTQK 2E2IK 3S1QC 3PO3K 2E2HK 2WB1L 1TWFK 1Y1VK 4BY1K 3RZDC 4A3IK 1XPPA 1HQMA 2A6HA 2NVYK 4LLGA 3S2HK 4KN4A 3GTMK 5IYDC 3M3YC 2JA7C 3WODA 2R7ZC 4X6AK 5IP9K 2WB1D 4MQ9A 3GTKC 2E2JK 4AYBL 5TMFA 2NVTC 1TWAC 3S1NK 3CQZK 2JA6K 2E2HC 4Y52C 4JK1A 3PO2C 3HOWC 5C4JK 5IP7K 4A3GC 1SFOC 5M3MK 3EQLA 4A3MK 4MEYA 5IYCC 2NVQK 3HOZC 4G7HA 5C4XC 2R92C 4KMUA 3S14C 4BBRK 2PA8L 1I6HK 2NVXC 3HOVC 4A3CK 3HKZD 4A3KC 3HOYC 4BY7C 2JA8C 1I3QC 2YU9C 1WCMC 1TWCC 5FLMC 3GTGC 3HOUC 3RZOC 3S15C 3S2HC 4A3JK 4BBSK 2PPBA 3K7AK 1IW7A 1K83C 5C4XK 3GTOK 5C3EK 3HOZK 3I4NC 3S1RC 1Y1VC 4BY1C 3M3YK 4YG2A 3S17C
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1TWF C;  2WAQ D;  2Y0S D;  4QIW D;  2O5I A;  4KN7 A;  2PA8 D;  4A3J C;  2JA8 K;  3PO2 K;  1YNJ A;  4OIP A;  3S2D K;  4QJV A;  2O5J A;  4ZH4 A;  1R9T K;  3H3V L;  4OIR A;  2A69 A;  4A3D K;  2E2I C;  3S14 K;  2A68 A;  4YFX A;  2Y0S L;  2CW0 A;  2JA5 K;  2NVX K;  5C44 K;  2B63 K;  3H0G C;  1I50 K;  2A6E A;  1YNN A;  4BBR C;  4A3I C;  3I4M C;  1I3Q K;  2YU9 K;  4A3B K;  4C3J C;  1I6V A;  4A3M C;  3DXJ A;  3HOV K;  4OIO A;  4A3K K;  4BY7 K;  5IYB K;  3GTL K;  1BDF A;  5C44 C;  2B63 C;  2NVT K;  3FKI C;  4A93 K;  3CQZ C;  5IYD K;  1TWG K;  4BXX K;  2PMZ D;  4C3J K;  3I4N K;  3S1R K;  4AYB D;  2JA5 C;  3K7A C;  5M3F K;  3GTO C;  1K83 K;  4A3G K;  5IYB C;  4MEX A;  3HOU K;  3RZO K;  3GTG K;  4A3F K;  4Q5S A;  1SMY A;  4A3C C;  4XSZ A;  1R9T C;  2PMZ L;  4QJV B;  4C3H C;  1I50 C;  4LJZ A;  2WAQ L;  3H0G K;  4Q4Z A;  4A3F C;  4A3B C;  5IP9 C;  3HOX C;  3GTP C;  4A3L C;  3GTJ K;  3I4M K;  3S17 K;  3S1M C;  1Y1W K;  5C3E C;  1TWH C;  3FKI K;  3HKZ L;  4G7O A;  4BBS C;  4A3D C;  1SFO K;  4G7Z A;  3GTJ C;  3HOX K;  4C3I C;  3GTP K;  4A3L K;  3S2D C;  4Y52 K;  2VUM K;  3S1Q K;  4XLN A;  4C3H K;  3S16 C;  4A3E K;  3S15 K;  4XSX A;  4YFK A;  1I6H C;  3GTK K;  5FJ8 K;  2E2J C;  4LK1 A;  3GTQ C;  5M5X K;  5IYC K;  4C2M C;  3M4O K;  5TMC A;  2BE5 A;  1Y1W C;  3GTM C;  2R93 K;  5IP7 C;  3RZD K;  3HOY K;  2JA6 C;  1TWG C;  3H3V D;  4BXX C;  5M5Y K;  5C4J C;  3HOW K;  2VUM C;  4GZY A;  4LK0 A;  4XLP A;  4A3E C;  3GTL C;  4X6A C;  4QIW L;  4Y7N C;  2R93 C;  3PO3 C;  4NOI A;  3S1N C;  1TWA K;  4C2M K;  2R92 K;  1TWH K;  2NVQ C;  3S1M K;  1ZYR A;  4OIN A;  2JA7 K;  2R7Z K;  3S16 K;  4YFN A;  4A93 C;  4OIQ A;  5M5W K;  1TWC K;  1WCM K;  2NVY C;  5D4D A;  4C3I K;  5FLM K;  3M4O C;  4Y7N K;  3GTQ K;  2E2I K;  3S1Q C;  3PO3 K;  2E2H K;  2WB1 L;  1TWF K;  1Y1V K;  4BY1 K;  3RZD C;  4A3I K;  1XPP A;  1HQM A;  2A6H A;  2NVY K;  4LLG A;  3S2H K;  4KN4 A;  3GTM K;  5IYD C;  3M3Y C;  2JA7 C;  3WOD A;  2R7Z C;  4X6A K;  5IP9 K;  2WB1 D;  4MQ9 A;  3GTK C;  2E2J K;  4AYB L;  5TMF A;  2NVT C;  1TWA C;  3S1N K;  3CQZ K;  2JA6 K;  2E2H C;  4Y52 C;  4JK1 A;  3PO2 C;  3HOW C;  5C4J K;  5IP7 K;  4A3G C;  1SFO C;  5M3M K;  3EQL A;  4A3M K;  4MEY A;  5IYC C;  2NVQ K;  3HOZ C;  4G7H A;  5C4X C;  2R92 C;  4KMU A;  3S14 C;  4BBR K;  2PA8 L;  1I6H K;  2NVX C;  3HOV C;  4A3C K;  3HKZ D;  4A3K C;  3HOY C;  4BY7 C;  2JA8 C;  1I3Q C;  2YU9 C;  1WCM C;  1TWC C;  5FLM C;  3GTG C;  3HOU C;  3RZO C;  3S15 C;  3S2H C;  4A3J K;  4BBS K;  2PPB A;  3K7A K;  1IW7 A;  1K83 C;  5C4X K;  3GTO K;  5C3E K;  3HOZ K;  3I4N C;  3S1R C;  1Y1V C;  4BY1 C;  3M3Y K;  4YG2 A;  3S17 C; 
#chains in the Genus database with same CATH topology
 4KN7 A;  4A3J C;  3PO2 K;  2ZFZ A;  3GTO A;  3GEI A;  4WFN S;  2O5J A;  4GTL A;  4ZH4 A;  4OIR A;  1IQ0 A;  3V4G A;  5JVH S;  1PJ7 A;  2B63 K;  1YNN A;  4A3I C;  3I4M C;  4A3B K;  2FQT A;  4KB4 A;  3HOV K;  3AD8 C;  1BS2 A;  2NVT K;  3FKI C;  3CQZ C;  1TWG K;  1PJ6 A;  2PMZ D;  4J3N A;  2GAH C;  2P8T A;  2W7V A;  2XCR B;  3T01 A;  3ERE D;  4Q5S A;  1WIH A;  4KM8 A;  2PMZ L;  4C3H C;  4KB2 A;  4A3B C;  4A3F C;  3I4M K;  3S17 K;  4A3L C;  1Y1V A;  3GTJ K;  3VA7 A;  1XZQ A;  3A8K A;  5C3E C;  4M1X A;  4A3D C;  4KAW X;  1EK8 A;  1DCO A;  3BP3 A;  2VUM K;  4XLN A;  4A3E K;  1ZXO A;  2GSU A;  3G4A A;  4YFK A;  1I6H C;  2D6F C;  3N3Y A;  2Y3P A;  3AD9 C;  3HOY K;  1WQF A;  2JA6 C;  3H3V D;  2R93 A;  2VUM C;  4GZY A;  4LK0 A;  4A3E C;  2GSN A;  1WOP A;  1VJE A;  1TWA K;  1JVI A;  1GE9 A;  4BLB A;  1ZYR A;  1USM A;  4YFN A;  4IO9 S;  1TWC K;  5FLM K;  3PO3 K;  2P5M A;  4C3I K;  3M4O C;  3GTQ K;  2E2I K;  2KXY A;  5CHP A;  1AB4 A;  3N0C A;  1WOR A;  4GT9 A;  2E2J K;  1O2B A;  1TWA C;  2E2H C;  4Y52 C;  3PO2 C;  3GEE A;  3HOW C;  4KAT A;  5C4J K;  4A3G C;  1O28 A;  2R92 C;  1I6H K;  1IBA A;  1I3Q A;  1B4B A;  2JA5 A;  3HKZ D;  1EFW A;  4LR2 A;  4A3K C;  4BY7 C;  1TWF K;  2YU9 C;  1WCM C;  3GTG C;  1WSV A;  1O2A A;  1K83 C;  3HOZ K;  1J6W A;  1JOE A;  1V5V A;  1Y1V C;  3M3Y K;  5IYD K;  3FKI K;  4YG2 A;  3S17 C;  4A3F K;  2Y0S D;  2WAQ D;  3S15 K;  4FM9 A;  1YNJ A;  4QJV A;  3FOE A;  2E2I C;  2CFA B;  4KMD A;  5TJ3 A;  3Q3Q A;  2Y0S L;  2NVX K;  1HI9 A;  5C44 K;  2ZJP S;  3H0G C;  2A6E A;  4BBR C;  2YU9 K;  1XZP A;  5IYB K;  3N0B A;  3GTL K;  1BDF A;  2B63 C;  3GTL A;  1UV7 A;  1WQH A;  3K7A C;  3GTO C;  4A3G K;  3OPF A;  5IYB C;  1WOS A;  3GTM A;  3ORE A;  2WAQ L;  1KQ4 A;  3H0G K;  4LQY A;  5IP9 C;  3HOX C;  3GTP C;  4XCH A;  3T00 A;  4KAS A;  1PJ5 A;  4KAR A;  3S1M C;  4BLA A;  1Y1W K;  3TTG A;  1WCM A;  2L3U A;  4G7O A;  3FKI A;  3G4C A;  4G7Z A;  2JA7 A;  3GTJ C;  3CAG A;  4C3I C;  3NUH A;  4A3L K;  3S2D C;  1TWH A;  2R92 A;  4C3H K;  4WJ4 A;  3GTK K;  5FJ8 K;  2E2J C;  4LK1 A;  3GTQ C;  3M4O K;  4C2M C;  5TMC A;  1J6X A;  1Y1W C;  4GTA A;  5IP7 C;  4KM9 A;  4X6A C;  1O24 A;  4QIW L;  5L46 A;  3GTK A;  2V6S A;  3S1N C;  2GSO A;  3A8I A;  1TWH K;  2R92 K;  2JA7 K;  4OIQ A;  1WCM K;  1O2F B;  4WF9 S;  1Y1W A;  3TFH A;  2WB1 L;  5E68 A;  1J98 A;  4BY1 K;  1IL2 A;  2L5N A;  3H0G A;  1INN A;  2A6H A;  3GTM K;  1IS1 A;  2JA7 C;  3WOD A;  2E2I A;  4X6A K;  1EQR A;  2WB1 D;  4RMF A;  3S1N K;  3ADA C;  4JK1 A;  3DLL S;  1TWA A;  5M3M K;  1XZP B;  4MEY A;  5IYC C;  3L4K A;  1WOO A;  4BBR K;  4LOW A;  2NVX C;  2YU9 A;  3HOV C;  2NVX A;  4A3C K;  1L0W A;  3HOY C;  2JA8 C;  1I3Q C;  4ILD A;  4P5B A;  2ZUF A;  4BBS K;  3S2H C;  3K7A K;  1TWF C;  1O29 A;  4QIW D;  2O5I A;  2GAG C;  4DDQ A;  2PA8 D;  4OIP A;  1TWF A;  4A3D K;  4PAA A;  4AH6 A;  2A68 A;  3S14 K;  4YFX A;  4KC6 A;  2CW0 A;  2JA5 K;  5DM6 S;  3GDZ A;  5JFE A;  1I3Q K;  4C3J C;  1I6V A;  2ZJR S;  1VGX A;  3GSI A;  4C45 A;  3SZY A;  5HL7 S;  3TFJ A;  1F7U A;  1USO A;  5C44 C;  4A93 K;  3S1R K;  5M3F K;  3LPX A;  2RGR A;  1XZQ B;  4MEX A;  3HOU K;  3RZO K;  4U67 S;  1O26 A;  1F9N A;  1SMY A;  1R9T C;  4QJV B;  3FOF A;  2KPU A;  3GTQ A;  3BUE A;  1XXA A;  1TWC A;  3HKZ L;  5HL8 A;  3S0X A;  1SFO K;  3HOX K;  3GTP K;  4Y52 K;  4PAB A;  1JQW A;  4FZB A;  3GTM C;  2R93 K;  3FHZ A;  1DCH A;  4BXX C;  1BJT A;  1FEU A;  5C4J C;  3HOW K;  3GTL C;  4GTF A;  1ZQ1 C;  4NOI A;  1X31 C;  4C2M K;  2VUM A;  3S16 K;  4A93 C;  5M5W K;  2CFA A;  2NVY C;  1DCP A;  1O25 A;  3AH5 A;  3S1Q C;  1Y1V K;  3GTJ A;  1G51 A;  3SZZ A;  3RZD C;  4A3I K;  1XPP A;  1HQM A;  2NVY K;  5IYD C;  3M3Y C;  2XCQ A;  5IP9 K;  4MQ9 A;  5CJ9 A;  4AYB L;  1RU0 A;  2NVT C;  3CQZ K;  2JA6 K;  3CF5 S;  2KQ1 A;  3AQO A;  1TWG A;  3GIR A;  1EI6 A;  3IPJ A;  2NVQ K;  5C4X C;  4G7H A;  3S14 C;  1B4A A;  2PA8 L;  5IOQ A;  2ZJQ S;  1ISE A;  5JVO A;  2B63 A;  1C0A A;  3BP8 C;  3HOU C;  3RZO C;  4A3J K;  2PPB A;  1IW7 A;  4P5A A;  3GTO K;  5C3E K;  1VRQ C;  3HXA A;  2JA8 K;  1XXB A;  3S2D K;  5EGH A;  4GTD A;  4O2D A;  1R9T K;  3H3V L;  2A69 A;  2EBB A;  5IOR A;  1I50 K;  3GTG A;  4A3M C;  3DXJ A;  1EH1 A;  4OIO A;  1K83 A;  4A3K K;  4BY7 K;  2V6U A;  4G0V A;  4IOC S;  4BXX K;  3AQP A;  4C3J K;  3I4N K;  4AYB D;  2JA5 C;  1K83 K;  4WCE S;  3TFI A;  5IOS A;  4GTE A;  1F7V A;  3GTG K;  1WQG A;  1I50 A;  1VH2 A;  4WFA S;  4A3C C;  4KMA A;  4XSZ A;  1I50 C;  4LJZ A;  4Q4Z A;  1R9T A;  3LYW A;  5HQH A;  2E2H A;  1XXC A;  1F93 A;  1TWH C;  2FQO A;  5EGE A;  4BBS C;  3A8J A;  2R7Z A;  1VLO A;  5IOT A;  3S1Q K;  3S16 C;  4XSX A;  3OEP A;  4G0W A;  4WJ3 M;  3L4J A;  1YX2 A;  5M5X K;  1O27 A;  3MML B;  5IYC K;  2BE5 A;  4WFB S;  3PIO S;  4WIL A;  3RZD K;  1TWG C;  5M5Y K;  1IE0 A;  4P9S A;  4IOA S;  5JVG S;  4XLP A;  4Y7N C;  2R93 C;  3PO3 C;  1J6V A;  3T02 A;  2NVQ C;  3S1M K;  4OIN A;  2RH6 A;  2R7Z K;  3CQZ A;  2JA6 A;  3QX3 A;  2XCO A;  4GFQ A;  4Y7N K;  5D4D A;  2E2H K;  2PHC B;  3GEH A;  2NVY A;  3LAJ A;  4LLG A;  3S2H K;  4KN4 A;  2R7Z C;  1DD5 A;  5DM7 S;  3GTK C;  3JST A;  5TMF A;  5IP7 K;  1SFO C;  3EQL A;  4GTB A;  4A3M K;  1BGW A;  3PIP S;  1ZVU A;  3HOZ C;  4KMU A;  1WSR A;  4GTC A;  2ZUE A;  4KMH A;  2V6T A;  1YCL A;  3AD7 C;  2JH3 A;  4BKW A;  4KDD A;  3S15 C;  1ZBS A;  2KWA A;  1TWC C;  5FLM C;  5C4X K;  3I4N C;  3S1R C;  4G0U A;  4BY1 C;  3GTP A;  3LAP A;  1SFO A; 
#chains in the Genus database with same CATH homology
 1TWF C;  2WAQ D;  2Y0S D;  4QIW D;  2O5I A;  4KN7 A;  2PA8 D;  4A3J C;  2JA8 K;  3PO2 K;  1YNJ A;  4OIP A;  3S2D K;  4QJV A;  2O5J A;  4ZH4 A;  1R9T K;  3H3V L;  4OIR A;  2A69 A;  4A3D K;  2E2I C;  3S14 K;  2A68 A;  4YFX A;  2Y0S L;  2CW0 A;  2JA5 K;  2NVX K;  5C44 K;  2B63 K;  3H0G C;  1I50 K;  2A6E A;  1YNN A;  4BBR C;  4A3I C;  3I4M C;  1I3Q K;  2YU9 K;  4A3B K;  4C3J C;  1I6V A;  4A3M C;  3DXJ A;  3HOV K;  4OIO A;  4A3K K;  4BY7 K;  5IYB K;  3GTL K;  1BDF A;  5C44 C;  2B63 C;  2NVT K;  3FKI C;  4A93 K;  3CQZ C;  5IYD K;  1TWG K;  4BXX K;  2PMZ D;  4C3J K;  3I4N K;  3S1R K;  4AYB D;  2JA5 C;  3K7A C;  5M3F K;  3GTO C;  1K83 K;  4A3G K;  5IYB C;  4MEX A;  3HOU K;  3RZO K;  3GTG K;  4A3F K;  4Q5S A;  1SMY A;  4A3C C;  4XSZ A;  1R9T C;  2PMZ L;  4QJV B;  4C3H C;  1I50 C;  4LJZ A;  2WAQ L;  3H0G K;  4Q4Z A;  4A3F C;  4A3B C;  5IP9 C;  3HOX C;  3GTP C;  4A3L C;  3GTJ K;  3I4M K;  3S17 K;  3S1M C;  1Y1W K;  5C3E C;  1TWH C;  3FKI K;  3HKZ L;  4G7O A;  4BBS C;  4A3D C;  1SFO K;  4G7Z A;  3GTJ C;  3HOX K;  4C3I C;  3GTP K;  4A3L K;  3S2D C;  4Y52 K;  2VUM K;  3S1Q K;  4XLN A;  4C3H K;  3S16 C;  4A3E K;  3S15 K;  4XSX A;  4YFK A;  1I6H C;  3GTK K;  5FJ8 K;  2E2J C;  4LK1 A;  3GTQ C;  5M5X K;  5IYC K;  4C2M C;  3M4O K;  5TMC A;  2BE5 A;  1Y1W C;  3GTM C;  2R93 K;  5IP7 C;  3RZD K;  3HOY K;  2JA6 C;  1TWG C;  3H3V D;  4BXX C;  5M5Y K;  5C4J C;  3HOW K;  2VUM C;  4GZY A;  4LK0 A;  4XLP A;  4A3E C;  3GTL C;  4X6A C;  4QIW L;  4Y7N C;  2R93 C;  3PO3 C;  4NOI A;  3S1N C;  1TWA K;  4C2M K;  2R92 K;  1TWH K;  2NVQ C;  3S1M K;  1ZYR A;  4OIN A;  2JA7 K;  2R7Z K;  3S16 K;  4YFN A;  4A93 C;  4OIQ A;  5M5W K;  1TWC K;  1WCM K;  2NVY C;  5D4D A;  4C3I K;  5FLM K;  3M4O C;  4Y7N K;  3GTQ K;  2E2I K;  3S1Q C;  3PO3 K;  2E2H K;  2WB1 L;  1TWF K;  1Y1V K;  4BY1 K;  3RZD C;  4A3I K;  1XPP A;  1HQM A;  2A6H A;  2NVY K;  4LLG A;  3S2H K;  4KN4 A;  3GTM K;  5IYD C;  3M3Y C;  2JA7 C;  3WOD A;  2R7Z C;  4X6A K;  5IP9 K;  2WB1 D;  4MQ9 A;  3GTK C;  2E2J K;  4AYB L;  5TMF A;  2NVT C;  1TWA C;  3S1N K;  3CQZ K;  2JA6 K;  2E2H C;  4Y52 C;  4JK1 A;  3PO2 C;  3HOW C;  5C4J K;  5IP7 K;  4A3G C;  1SFO C;  5M3M K;  3EQL A;  4A3M K;  4MEY A;  5IYC C;  2NVQ K;  3HOZ C;  4G7H A;  5C4X C;  2R92 C;  4KMU A;  3S14 C;  4BBR K;  2PA8 L;  1I6H K;  2NVX C;  3HOV C;  4A3C K;  3HKZ D;  4A3K C;  3HOY C;  4BY7 C;  2JA8 C;  1I3Q C;  2YU9 C;  1WCM C;  1TWC C;  5FLM C;  3GTG C;  3HOU C;  3RZO C;  3S15 C;  3S2H C;  4A3J K;  4BBS K;  2PPB A;  3K7A K;  1IW7 A;  1K83 C;  5C4X K;  3GTO K;  5C3E K;  3HOZ K;  3I4N C;  3S1R C;  1Y1V C;  4BY1 C;  3M3Y K;  4YG2 A;  3S17 C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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