3HOZC

Complete rna polymerase ii elongation complex iv with a t-u mismatch and a frayed rna 3'-guanine
Total Genus 52
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
52
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural basis of transcription: mismatch-specific fidelity mechanisms and paused RNA polymerase II with frayed RNA.
pubmed doi rcsb
molecule tags Transcription,transferase/dna/rna hybrid
molecule keywords DNA-directed RNA polymerase II subunit RPB1
total genus 52
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2009-06-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3hozC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3hozC01
1TWAK 4X6AK 2BE5A 5M5XK 2JA8C 4BY7C 1TWFC 5TMFA 1R9TC 2E2JC 2O5IA 4XSZA 5M5WK 3S17K 4BY1K 3M4OC 4YFKA 4A3BK 2R7ZK 3S1NK 4OIOA 2WAQL 4GZYA 4A3JC 4KN7A 4BXXC 4A3JK 2R92K 3GTGC 3GTGK 4A3CC 1I6HC 1TWCK 2JA6K 1I3QK 2NVQK 3S1MK 1TWGC 4XLPA 2NVTC 1TWGK 2R93C 3RZDK 1WCMC 2A6HA 4YFXA 1SFOC 5FLMK 2E2IK 4Q4ZA 4A3IK 4KN4A 1Y1WC 4MEYA 3GTPC 1Y1WK 3HOVC 2E2HK 2PMZD 3HOXK 4A3KK 3GTKC 3HOVK 3GTKK 4LK0A 3HOUK 5C4JK 4A3EC 4QJVA 4A3LC 5IP7K 4A3EK 4AYBD 3S2DC 4Q5SA 3GTQC 3H3VD 4A3GC 4KMUA 3EQLA 3GTQK 3S2HC 4A3GK 4A3MC 3HOWC 4C3HK 1TWAC 4QIWL 4X6AC 4A3MK 3FKIK 3HOWK 4OIQA 3S2HK 4BBSK 3WODA 4G7HA 2PA8D 3S17C 4Y7NK 3RZOK 5M3FK 5IYCK 3PO2K 4BY1C 2YU9K 4A3BC 2R7ZC 2A68A 4YFNA 3S1NC 1I6VA 5IP9K 2R92C 4C3IK 5IYDK 1TWCC 2NVQC 1I3QC 2JA6C 3S1MC 4QJVB 3S15K 2A69A 3RZDC 4BBRK 4LJZA 4LLGA 4ZH4A 5FLMC 2E2IC 3I4NC 3GTMK 3I4NK 1I50K 4A3IC 2E2HC 3HOXC 4C2MK 4A3KC 2WAQD 3S16K 3DXJA 3HOUC 3GTOK 3PO3K 5C4JC 5IP7C 1HQMA 2WB1L 4OINA 3HKZL 4C3JK 3H0GK 4A93K 4C3HC 5C44K 2VUMK 3FKIC 4BBSC 2B63K 4MQ9A 2JA5C 2JA5K 4Y7NC 2NVXK 3RZOC 3PO2C 5IYCC 3I4MK 1TWHK 2YU9C 4YG2A 2NVYK 4XLNA 4A3FK 3GTJC 3HOYK 4MEXA 3GTJK 2Y0SL 3S1RK 5IP9C 3HOZK 3S1QC 5C3EK 3S1QK 4QIWD 4C3IC 2CW0A 3S15C 4JK1A 2JA7K 4BBRC 5IYDC 1Y1VC 1Y1VK 3GTMC 1XPPA 1I50C 4XSXA 4Y52C 4Y52K 5TMCA 4G7ZA 4C2MC 3S16C 1IW7A 5C4XK 3GTOC 3PO3C 5IYBK 3GTLC 3CQZK 1BDFA 1YNNA 3GTLK 4C3JC 4NOIA 3H0GC 4A93C 4OIPA 4G7OA 2JA8K 5C44C 4BY7K 1TWFK 1R9TK 2VUMC 2E2JK 2B63C 3M4OK 3K7AC 2NVXC 2O5JA 3K7AK 5M3MK 3I4MC 2PMZL 5M5YK 1TWHC 4OIRA 2NVYC 3M3YC 1YNJA 4A3FC 1ZYRA 2WB1D 3HOYC 3M3YK 4AYBL 3HKZD 3S1RC 4A3CK 4BXXK 3H3VL 1I6HK 2PPBA 3HOZC 4LK1A 5C3EC 5FJ8K 2NVTK 2R93K 1WCMK 1K83C 1K83K 1SFOK 2JA7C 2PA8L 3GTPK 2A6EA 4A3LK 4A3DC 4A3DK 3S2DK 2Y0SD 1SMYA 5C4XC 5IYBC 5D4DA 3S14C 3CQZC 3S14K
chains in the Genus database with same CATH superfamily
5M5XK 2JA8C 1TWFC 1R9TC 5HQHA 2O5IA 1BJTA 1IBAA 5IOQA 4A3BK 4OIOA 3Q3QA 4BXXC 4A3JK 2R93A 3GTGK 1WCMA 1TWCK 1SFOA 2JA6K 4A3CK 1TWGC 3IPJA 3GTPA 5FLMK 4Q4ZA 4KARA 4GT9A 1IQ0A 3NUHA 3OPFA 4A3EC 3CQZC 3DLLS 4WCES 4Q5SA 3GTQC 4A3GK 3S2HC 3LPXA 3HOWK 1F93A 4X6AC 1XXCA 1XZQA 3RZOK 1WOPA 2YU9K 2R7ZC 2A68A 3GIRA 3S1NC 3V4GA 3GTGA 5IP9K 1TWCA 2JA6A 2R92C 1I3QC 3GEEA 3S1MC 3RZDC 4LJZA 2RH6A 2L3UA 4A3KC 3DXJA 3HOUC 3GTOK 5C4JC 5IP7C 4WFAS 4OINA 3MMLB 1XZPA 3FOEA 3GDZA 5C44K 4BBSC 3G4CA 2YU9A 1O26A 2NVXK 2V6UA 1GE9A 3HOYK 3GTJC 1YX2A 2Y0SL 3S1RK 2GAGC 4KM9A 5C3EK 3S1QK 3S15C 4JK1A 1O2FB 2RGRA 5IYDC 3GTMC 4LQYA 2ZJRS 1G51A 3GTOA 3S16C 5C4XK 3PO3C 4C3JC 1ZBSA 3H0GC 4A93C 4BY7K 1J6XA 2NVXA 3M4OK 2XCOA 2CFAA 4U67S 5EGEA 5M3MK 4WILA 2KPUA 4OIRA 3M3YC 1YNJA 1WORA 1BGWA 2D6FC 4LK1A 4G0VA 5IOTA 3PIOS 4C45A 1PJ6A 5EGHA 3T02A 1J98A 5DM7S 4A3DC 2ZUFA 5IYBC 2V6SA 1JQWA 2GSNA 5M5WK 4YFKA 4AH6A 3N0CA 3OREA 1O24A 4A3JC 3GTGC 4FZBA 4A3CC 2NVQK 4XLPA 1FEUA 4YFXA 2E2IK 1WOOA 2E2HK 2P5MA 1Y1WK 3HOVK 1VJEA 3GTKK 1VH2A 3N0BA 5HL8A 3S2DC 4A3GC 3HOWC 4C3HK 1TWAC 2JH3A 3AQPA 4A3MK 4OIQA 3S17C 4Y7NK 3PO2K 5IYCK 4BY1C 2FQOA 1USOA 4YFNA 2FQTA 3A8IA 1L0WA 1B4BA 4QJVB 2E2IA 2A69A 1O25A 2E2HA 1Y1WA 3TFHA 1F9NA 1I50K 3GTKA 4A3IC 1WQFA 3HOXC 4C2MK 5JVOA 4G0WA 4IOCS 4WFNS 3OEPA 2ZJQS 3SZYA 3FKIC 1X31C 2P8TA 1DCPA 3AQOA 3I4MK 2NVYK 1XXAA 3HOZK 3S1QC 4C3IC 1Y1VA 1I50A 2JA7K 4BBRC 1XPPA 4BKWA 4XSXA 3L4KA 4WF9S 2V6TA 3CQZK 1BDFA 1YNNA 3GTLK 5CHPA 2KWAA 4NOIA 3AD7C 3GEIA 2JA8K 4G7OA 5L46A 1TWFK 1R9TK 2VUMC 2B63C 3HXAA 4GTDA 1ZXOA 2NVYA 2O5JA 1IS1A 4WJ3M 5M5YK 1TWHC 5HL7S 4A3FC 2WB1D 4BXXK 1EI6A 3HKZD 4M1XA 1IL2A 1WIHA 4PAAA 2JA7A 2ZUEA 1AB4A 4KDDA 1V5VA 4RMFA 1EFWA 3GEHA 3PIPS 1O28A 1BS2A 3CQZA 3GTLA 5D4DA 1PJ5A 3S14K 1TWFA 2BE5A 3BP8C 4GTCA 1R9TA 4X6AK 2E2JC 2KQ1A 1IE0A 2R7ZK 3GSIA 3S1NK 4ILDA 1HI9A 4GZYA 2R92K 1I6HC 1EK8A 1I3QK 3S1MK 2NVTC 3SZZA 2R93C 3RZDK 1WCMC 1SFOC 1ISEA 4KN4A 1Y1WC 4MEYA 3GTPC 4KATA 3HOVC 2Y3PA 2PMZD 2W7VA 4KMDA 3GTKC 4A3KK 1O29A 3HOUK 5C4JK 4GFQA 4A3LC 5IP7K 3BP3A 4AYBD 4KMAA 3EQLA 4A3MC 4BBSK 4KASA 2R7ZA 4KM8A 4A3BC 4LOWA 1I6VA 2R92A 4G0UA 4GTBA 1I3QA 1ZQ1C 1UV7A 4FM9A 1TWCC 2JA6C 1YCLA 3S15K 5IORA 4P5BA 2ZJPS 5IYDK 5FLMC 3GTMK 3I4NK 1DCHA 3S16K 4IOAS 1XZQB 2WAQD 3T01A 3FHZA 3PO3K 2WB1L 3HKZL 4C3JK 3AD9C 3H0GK 4KB2A 4GTLA 4A93K 1XXBA 2JA5K 3RZOC 2GAHC 4O2DA 4BLAA 2YU9C 4YG2A 2EBBA 1F7VA 1F7UA 5TJ3A 5IP9C 2XCRB 4GTAA 5JVHS 4QIWD 3BUEA 1ZVUA 3GTMA 2KXYA 1EH1A 1XZPB 1Y1VK 1VLOA 3TFIA 4Y52K 5TMCA 1DD5A 4P5AA 3GTOC 3TFJA 5IYBK 3H0GA 3GTLC 5DM6S 5IOSA 3LYWA 4OIPA 2ZFZA 5C44C 2JA5A 3L4JA 2NVXC 3K7AK 2PMZL 3N3YA 3HOYC 1ZYRA 1WQHA 4KAWX 4AYBL 3S1RC 4WJ4A 3LAPA 2PPBA 5C3EC 1K83K 2A6EA 3G4AA 3S2DK 1SMYA 5C4XC 2CFAB 1O2AA 3S14C 1PJ7A 1TWAK 4BY7C 5TMFA 3S17K 1O2BA 4XSZA 1EQRA 4BY1K 3M4OC 2PHCB 5CJ9A 4GTEA 2WAQL 3AH5A 4KN7A 4KB4A 1C0AA 1K83A 1TWGK 1KQ4A 2A6HA 3LAJA 4A3IK 4P9SA 3HOXK 3AD8C 4LK0A 4QJVA 4A3EK 1TWAA 3H3VD 1O27A 4KMUA 3GTQK 3ERED 3S2HK 4QIWL 3FKIK 4GTFA 3A8KA 4PABA 3WODA 4G7HA 2PA8D 1B4AA 3FOFA 5M3FK 5E68A 1INNA 3CAGA 1WOSA 4C3IK 1TWGA 2NVQC 4BBRK 4LLGA 4ZH4A 2E2IC 3I4NC 2GSUA 4IO9S 2GSOA 3CF5S 2E2HC 3S0XA 4J3NA 4KMHA 3GTQA 1HQMA 4WFBS 1J6WA 3FKIA 4C3HC 1USMA 1JOEA 2VUMK 5JFEA 2B63K 4MQ9A 2XCQA 2JA5C 1WQGA 4Y7NC 3PO2C 5IYCC 1TWHK 4XCHA 4XLNA 4A3FK 3ADAC 3GTJK 1RU0A 3A8JA 2CW0A 1Y1VC 4BLBA 1I50C 4Y52C 4G7ZA 4C2MC 1IW7A 1WSRA 2VUMA 4LR2A 2B63A 3VA7A 5JVGS 1JVIA 2E2JK 3TTGA 1VRQC 1J6VA 1TWHA 3K7AC 1VGXA 1DCOA 3T00A 3I4MC 3GTJA 2L5NA 2NVYC 3QX3A 3M3YK 1WSVA 3H3VL 1I6HK 3HOZC 5FJ8K 2NVTK 2R93K 1WCMK 1K83C 4KC6A 1SFOK 2JA7C 2PA8L 3GTPK 4DDQA 4A3LK 3JSTA 4A3DK 2Y0SD 4MEXA
chains in the Genus database with same CATH topology
1TWAK 4X6AK 2BE5A 5M5XK 2JA8C 4BY7C 1TWFC 5TMFA 1R9TC 2E2JC 2O5IA 4XSZA 5M5WK 3S17K 4BY1K 3M4OC 4YFKA 4A3BK 2R7ZK 3S1NK 4OIOA 2WAQL 4GZYA 4A3JC 4KN7A 4BXXC 4A3JK 2R92K 3GTGC 3GTGK 4A3CC 1I6HC 1TWCK 2JA6K 1I3QK 2NVQK 3S1MK 1TWGC 4XLPA 2NVTC 1TWGK 2R93C 3RZDK 1WCMC 2A6HA 4YFXA 1SFOC 5FLMK 2E2IK 4Q4ZA 4A3IK 4KN4A 1Y1WC 4MEYA 3GTPC 1Y1WK 3HOVC 2E2HK 2PMZD 3HOXK 4A3KK 3GTKC 3HOVK 3GTKK 4LK0A 3HOUK 5C4JK 4A3EC 4QJVA 4A3LC 5IP7K 4A3EK 4AYBD 3S2DC 4Q5SA 3GTQC 3H3VD 4A3GC 4KMUA 3EQLA 3GTQK 3S2HC 4A3GK 4A3MC 3HOWC 4C3HK 1TWAC 4QIWL 4X6AC 4A3MK 3FKIK 3HOWK 4OIQA 3S2HK 4BBSK 3WODA 4G7HA 2PA8D 3S17C 4Y7NK 3RZOK 5M3FK 5IYCK 3PO2K 4BY1C 2YU9K 4A3BC 2R7ZC 2A68A 4YFNA 3S1NC 1I6VA 5IP9K 2R92C 4C3IK 5IYDK 1TWCC 2NVQC 1I3QC 2JA6C 3S1MC 4QJVB 3S15K 2A69A 3RZDC 4BBRK 4LJZA 4LLGA 4ZH4A 5FLMC 2E2IC 3I4NC 3GTMK 3I4NK 1I50K 4A3IC 2E2HC 3HOXC 4C2MK 4A3KC 2WAQD 3S16K 3DXJA 3HOUC 3GTOK 3PO3K 5C4JC 5IP7C 1HQMA 2WB1L 4OINA 3HKZL 4C3JK 3H0GK 4A93K 4C3HC 5C44K 2VUMK 3FKIC 4BBSC 2B63K 4MQ9A 2JA5C 2JA5K 4Y7NC 2NVXK 3RZOC 3PO2C 5IYCC 3I4MK 1TWHK 2YU9C 4YG2A 2NVYK 4XLNA 4A3FK 3GTJC 3HOYK 4MEXA 3GTJK 2Y0SL 3S1RK 5IP9C 3HOZK 3S1QC 5C3EK 3S1QK 4QIWD 4C3IC 2CW0A 3S15C 4JK1A 2JA7K 4BBRC 5IYDC 1Y1VC 1Y1VK 3GTMC 1XPPA 1I50C 4XSXA 4Y52C 4Y52K 5TMCA 4G7ZA 4C2MC 3S16C 1IW7A 5C4XK 3GTOC 3PO3C 5IYBK 3GTLC 3CQZK 1BDFA 1YNNA 3GTLK 4C3JC 4NOIA 3H0GC 4A93C 4OIPA 4G7OA 2JA8K 5C44C 4BY7K 1TWFK 1R9TK 2VUMC 2E2JK 2B63C 3M4OK 3K7AC 2NVXC 2O5JA 3K7AK 5M3MK 3I4MC 2PMZL 5M5YK 1TWHC 4OIRA 2NVYC 3M3YC 1YNJA 4A3FC 1ZYRA 2WB1D 3HOYC 3M3YK 4AYBL 3HKZD 3S1RC 4A3CK 4BXXK 3H3VL 1I6HK 2PPBA 3HOZC 4LK1A 5C3EC 5FJ8K 2NVTK 2R93K 1WCMK 1K83C 1K83K 1SFOK 2JA7C 2PA8L 3GTPK 2A6EA 4A3LK 4A3DC 4A3DK 3S2DK 2Y0SD 1SMYA 5C4XC 5IYBC 5D4DA 3S14C 3CQZC 3S14K
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1TWA K;  4X6A K;  2BE5 A;  5M5X K;  2JA8 C;  4BY7 C;  1TWF C;  5TMF A;  1R9T C;  2E2J C;  2O5I A;  4XSZ A;  5M5W K;  3S17 K;  4BY1 K;  3M4O C;  4YFK A;  4A3B K;  2R7Z K;  3S1N K;  4OIO A;  2WAQ L;  4GZY A;  4A3J C;  4KN7 A;  4BXX C;  4A3J K;  2R92 K;  3GTG C;  3GTG K;  4A3C C;  1I6H C;  1TWC K;  2JA6 K;  1I3Q K;  2NVQ K;  3S1M K;  1TWG C;  4XLP A;  2NVT C;  1TWG K;  2R93 C;  3RZD K;  1WCM C;  2A6H A;  4YFX A;  1SFO C;  5FLM K;  2E2I K;  4Q4Z A;  4A3I K;  4KN4 A;  1Y1W C;  4MEY A;  3GTP C;  1Y1W K;  3HOV C;  2E2H K;  2PMZ D;  3HOX K;  4A3K K;  3GTK C;  3HOV K;  3GTK K;  4LK0 A;  3HOU K;  5C4J K;  4A3E C;  4QJV A;  4A3L C;  5IP7 K;  4A3E K;  4AYB D;  3S2D C;  4Q5S A;  3GTQ C;  3H3V D;  4A3G C;  4KMU A;  3EQL A;  3GTQ K;  3S2H C;  4A3G K;  4A3M C;  3HOW C;  4C3H K;  1TWA C;  4QIW L;  4X6A C;  4A3M K;  3FKI K;  3HOW K;  4OIQ A;  3S2H K;  4BBS K;  3WOD A;  4G7H A;  2PA8 D;  3S17 C;  4Y7N K;  3RZO K;  5M3F K;  5IYC K;  3PO2 K;  4BY1 C;  2YU9 K;  4A3B C;  2R7Z C;  2A68 A;  4YFN A;  3S1N C;  1I6V A;  5IP9 K;  2R92 C;  4C3I K;  5IYD K;  1TWC C;  2NVQ C;  1I3Q C;  2JA6 C;  3S1M C;  4QJV B;  3S15 K;  2A69 A;  3RZD C;  4BBR K;  4LJZ A;  4LLG A;  4ZH4 A;  5FLM C;  2E2I C;  3I4N C;  3GTM K;  3I4N K;  1I50 K;  4A3I C;  2E2H C;  3HOX C;  4C2M K;  4A3K C;  2WAQ D;  3S16 K;  3DXJ A;  3HOU C;  3GTO K;  3PO3 K;  5C4J C;  5IP7 C;  1HQM A;  2WB1 L;  4OIN A;  3HKZ L;  4C3J K;  3H0G K;  4A93 K;  4C3H C;  5C44 K;  2VUM K;  3FKI C;  4BBS C;  2B63 K;  4MQ9 A;  2JA5 C;  2JA5 K;  4Y7N C;  2NVX K;  3RZO C;  3PO2 C;  5IYC C;  3I4M K;  1TWH K;  2YU9 C;  4YG2 A;  2NVY K;  4XLN A;  4A3F K;  3GTJ C;  3HOY K;  4MEX A;  3GTJ K;  2Y0S L;  3S1R K;  5IP9 C;  3HOZ K;  3S1Q C;  5C3E K;  3S1Q K;  4QIW D;  4C3I C;  2CW0 A;  3S15 C;  4JK1 A;  2JA7 K;  4BBR C;  5IYD C;  1Y1V C;  1Y1V K;  3GTM C;  1XPP A;  1I50 C;  4XSX A;  4Y52 C;  4Y52 K;  5TMC A;  4G7Z A;  4C2M C;  3S16 C;  1IW7 A;  5C4X K;  3GTO C;  3PO3 C;  5IYB K;  3GTL C;  3CQZ K;  1BDF A;  1YNN A;  3GTL K;  4C3J C;  4NOI A;  3H0G C;  4A93 C;  4OIP A;  4G7O A;  2JA8 K;  5C44 C;  4BY7 K;  1TWF K;  1R9T K;  2VUM C;  2E2J K;  2B63 C;  3M4O K;  3K7A C;  2NVX C;  2O5J A;  3K7A K;  5M3M K;  3I4M C;  2PMZ L;  5M5Y K;  1TWH C;  4OIR A;  2NVY C;  3M3Y C;  1YNJ A;  4A3F C;  1ZYR A;  2WB1 D;  3HOY C;  3M3Y K;  4AYB L;  3HKZ D;  3S1R C;  4A3C K;  4BXX K;  3H3V L;  1I6H K;  2PPB A;  3HOZ C;  4LK1 A;  5C3E C;  5FJ8 K;  2NVT K;  2R93 K;  1WCM K;  1K83 C;  1K83 K;  1SFO K;  2JA7 C;  2PA8 L;  3GTP K;  2A6E A;  4A3L K;  4A3D C;  4A3D K;  3S2D K;  2Y0S D;  1SMY A;  5C4X C;  5IYB C;  5D4D A;  3S14 C;  3CQZ C;  3S14 K; 
#chains in the Genus database with same CATH topology
 5M5X K;  2JA8 C;  1TWF C;  1R9T C;  5HQH A;  2O5I A;  1BJT A;  1IBA A;  5IOQ A;  4A3B K;  4OIO A;  3Q3Q A;  4BXX C;  4A3J K;  2R93 A;  3GTG K;  1WCM A;  1TWC K;  1SFO A;  2JA6 K;  4A3C K;  1TWG C;  3IPJ A;  3GTP A;  5FLM K;  4Q4Z A;  4KAR A;  4GT9 A;  1IQ0 A;  3NUH A;  3OPF A;  4A3E C;  3CQZ C;  3DLL S;  4WCE S;  4Q5S A;  3GTQ C;  4A3G K;  3S2H C;  3LPX A;  3HOW K;  1F93 A;  4X6A C;  1XXC A;  1XZQ A;  3RZO K;  1WOP A;  2YU9 K;  2R7Z C;  2A68 A;  3GIR A;  3S1N C;  3V4G A;  3GTG A;  5IP9 K;  1TWC A;  2JA6 A;  2R92 C;  1I3Q C;  3GEE A;  3S1M C;  3RZD C;  4LJZ A;  2RH6 A;  2L3U A;  4A3K C;  3DXJ A;  3HOU C;  3GTO K;  5C4J C;  5IP7 C;  4WFA S;  4OIN A;  3MML B;  1XZP A;  3FOE A;  3GDZ A;  5C44 K;  4BBS C;  3G4C A;  2YU9 A;  1O26 A;  2NVX K;  2V6U A;  1GE9 A;  3HOY K;  3GTJ C;  1YX2 A;  2Y0S L;  3S1R K;  2GAG C;  4KM9 A;  5C3E K;  3S1Q K;  3S15 C;  4JK1 A;  1O2F B;  2RGR A;  5IYD C;  3GTM C;  4LQY A;  2ZJR S;  1G51 A;  3GTO A;  3S16 C;  5C4X K;  3PO3 C;  4C3J C;  1ZBS A;  3H0G C;  4A93 C;  4BY7 K;  1J6X A;  2NVX A;  3M4O K;  2XCO A;  2CFA A;  4U67 S;  5EGE A;  5M3M K;  4WIL A;  2KPU A;  4OIR A;  3M3Y C;  1YNJ A;  1WOR A;  1BGW A;  2D6F C;  4LK1 A;  4G0V A;  5IOT A;  3PIO S;  4C45 A;  1PJ6 A;  5EGH A;  3T02 A;  1J98 A;  5DM7 S;  4A3D C;  2ZUF A;  5IYB C;  2V6S A;  1JQW A;  2GSN A;  5M5W K;  4YFK A;  4AH6 A;  3N0C A;  3ORE A;  1O24 A;  4A3J C;  3GTG C;  4FZB A;  4A3C C;  2NVQ K;  4XLP A;  1FEU A;  4YFX A;  2E2I K;  1WOO A;  2E2H K;  2P5M A;  1Y1W K;  3HOV K;  1VJE A;  3GTK K;  1VH2 A;  3N0B A;  5HL8 A;  3S2D C;  4A3G C;  3HOW C;  4C3H K;  1TWA C;  2JH3 A;  3AQP A;  4A3M K;  4OIQ A;  3S17 C;  4Y7N K;  3PO2 K;  5IYC K;  4BY1 C;  2FQO A;  1USO A;  4YFN A;  2FQT A;  3A8I A;  1L0W A;  1B4B A;  4QJV B;  2E2I A;  2A69 A;  1O25 A;  2E2H A;  1Y1W A;  3TFH A;  1F9N A;  1I50 K;  3GTK A;  4A3I C;  1WQF A;  3HOX C;  4C2M K;  5JVO A;  4G0W A;  4IOC S;  4WFN S;  3OEP A;  2ZJQ S;  3SZY A;  3FKI C;  1X31 C;  2P8T A;  1DCP A;  3AQO A;  3I4M K;  2NVY K;  1XXA A;  3HOZ K;  3S1Q C;  4C3I C;  1Y1V A;  1I50 A;  2JA7 K;  4BBR C;  1XPP A;  4BKW A;  4XSX A;  3L4K A;  4WF9 S;  2V6T A;  3CQZ K;  1BDF A;  1YNN A;  3GTL K;  5CHP A;  2KWA A;  4NOI A;  3AD7 C;  3GEI A;  2JA8 K;  4G7O A;  5L46 A;  1TWF K;  1R9T K;  2VUM C;  2B63 C;  3HXA A;  4GTD A;  1ZXO A;  2NVY A;  2O5J A;  1IS1 A;  4WJ3 M;  5M5Y K;  1TWH C;  5HL7 S;  4A3F C;  2WB1 D;  4BXX K;  1EI6 A;  3HKZ D;  4M1X A;  1IL2 A;  1WIH A;  4PAA A;  2JA7 A;  2ZUE A;  1AB4 A;  4KDD A;  1V5V A;  4RMF A;  1EFW A;  3GEH A;  3PIP S;  1O28 A;  1BS2 A;  3CQZ A;  3GTL A;  5D4D A;  1PJ5 A;  3S14 K;  1TWF A;  2BE5 A;  3BP8 C;  4GTC A;  1R9T A;  4X6A K;  2E2J C;  2KQ1 A;  1IE0 A;  2R7Z K;  3GSI A;  3S1N K;  4ILD A;  1HI9 A;  4GZY A;  2R92 K;  1I6H C;  1EK8 A;  1I3Q K;  3S1M K;  2NVT C;  3SZZ A;  2R93 C;  3RZD K;  1WCM C;  1SFO C;  1ISE A;  4KN4 A;  1Y1W C;  4MEY A;  3GTP C;  4KAT A;  3HOV C;  2Y3P A;  2PMZ D;  2W7V A;  4KMD A;  3GTK C;  4A3K K;  1O29 A;  3HOU K;  5C4J K;  4GFQ A;  4A3L C;  5IP7 K;  3BP3 A;  4AYB D;  4KMA A;  3EQL A;  4A3M C;  4BBS K;  4KAS A;  2R7Z A;  4KM8 A;  4A3B C;  4LOW A;  1I6V A;  2R92 A;  4G0U A;  4GTB A;  1I3Q A;  1ZQ1 C;  1UV7 A;  4FM9 A;  1TWC C;  2JA6 C;  1YCL A;  3S15 K;  5IOR A;  4P5B A;  2ZJP S;  5IYD K;  5FLM C;  3GTM K;  3I4N K;  1DCH A;  3S16 K;  4IOA S;  1XZQ B;  2WAQ D;  3T01 A;  3FHZ A;  3PO3 K;  2WB1 L;  3HKZ L;  4C3J K;  3AD9 C;  3H0G K;  4KB2 A;  4GTL A;  4A93 K;  1XXB A;  2JA5 K;  3RZO C;  2GAH C;  4O2D A;  4BLA A;  2YU9 C;  4YG2 A;  2EBB A;  1F7V A;  1F7U A;  5TJ3 A;  5IP9 C;  2XCR B;  4GTA A;  5JVH S;  4QIW D;  3BUE A;  1ZVU A;  3GTM A;  2KXY A;  1EH1 A;  1XZP B;  1Y1V K;  1VLO A;  3TFI A;  4Y52 K;  5TMC A;  1DD5 A;  4P5A A;  3GTO C;  3TFJ A;  5IYB K;  3H0G A;  3GTL C;  5DM6 S;  5IOS A;  3LYW A;  4OIP A;  2ZFZ A;  5C44 C;  2JA5 A;  3L4J A;  2NVX C;  3K7A K;  2PMZ L;  3N3Y A;  3HOY C;  1ZYR A;  1WQH A;  4KAW X;  4AYB L;  3S1R C;  4WJ4 A;  3LAP A;  2PPB A;  5C3E C;  1K83 K;  2A6E A;  3G4A A;  3S2D K;  1SMY A;  5C4X C;  2CFA B;  1O2A A;  3S14 C;  1PJ7 A;  1TWA K;  4BY7 C;  5TMF A;  3S17 K;  1O2B A;  4XSZ A;  1EQR A;  4BY1 K;  3M4O C;  2PHC B;  5CJ9 A;  4GTE A;  2WAQ L;  3AH5 A;  4KN7 A;  4KB4 A;  1C0A A;  1K83 A;  1TWG K;  1KQ4 A;  2A6H A;  3LAJ A;  4A3I K;  4P9S A;  3HOX K;  3AD8 C;  4LK0 A;  4QJV A;  4A3E K;  1TWA A;  3H3V D;  1O27 A;  4KMU A;  3GTQ K;  3ERE D;  3S2H K;  4QIW L;  3FKI K;  4GTF A;  3A8K A;  4PAB A;  3WOD A;  4G7H A;  2PA8 D;  1B4A A;  3FOF A;  5M3F K;  5E68 A;  1INN A;  3CAG A;  1WOS A;  4C3I K;  1TWG A;  2NVQ C;  4BBR K;  4LLG A;  4ZH4 A;  2E2I C;  3I4N C;  2GSU A;  4IO9 S;  2GSO A;  3CF5 S;  2E2H C;  3S0X A;  4J3N A;  4KMH A;  3GTQ A;  1HQM A;  4WFB S;  1J6W A;  3FKI A;  4C3H C;  1USM A;  1JOE A;  2VUM K;  5JFE A;  2B63 K;  4MQ9 A;  2XCQ A;  2JA5 C;  1WQG A;  4Y7N C;  3PO2 C;  5IYC C;  1TWH K;  4XCH A;  4XLN A;  4A3F K;  3ADA C;  3GTJ K;  1RU0 A;  3A8J A;  2CW0 A;  1Y1V C;  4BLB A;  1I50 C;  4Y52 C;  4G7Z A;  4C2M C;  1IW7 A;  1WSR A;  2VUM A;  4LR2 A;  2B63 A;  3VA7 A;  5JVG S;  1JVI A;  2E2J K;  3TTG A;  1VRQ C;  1J6V A;  1TWH A;  3K7A C;  1VGX A;  1DCO A;  3T00 A;  3I4M C;  3GTJ A;  2L5N A;  2NVY C;  3QX3 A;  3M3Y K;  1WSV A;  3H3V L;  1I6H K;  3HOZ C;  5FJ8 K;  2NVT K;  2R93 K;  1WCM K;  1K83 C;  4KC6 A;  1SFO K;  2JA7 C;  2PA8 L;  3GTP K;  4DDQ A;  4A3L K;  3JST A;  4A3D K;  2Y0S D;  4MEX A; 
#chains in the Genus database with same CATH homology
 1TWA K;  4X6A K;  2BE5 A;  5M5X K;  2JA8 C;  4BY7 C;  1TWF C;  5TMF A;  1R9T C;  2E2J C;  2O5I A;  4XSZ A;  5M5W K;  3S17 K;  4BY1 K;  3M4O C;  4YFK A;  4A3B K;  2R7Z K;  3S1N K;  4OIO A;  2WAQ L;  4GZY A;  4A3J C;  4KN7 A;  4BXX C;  4A3J K;  2R92 K;  3GTG C;  3GTG K;  4A3C C;  1I6H C;  1TWC K;  2JA6 K;  1I3Q K;  2NVQ K;  3S1M K;  1TWG C;  4XLP A;  2NVT C;  1TWG K;  2R93 C;  3RZD K;  1WCM C;  2A6H A;  4YFX A;  1SFO C;  5FLM K;  2E2I K;  4Q4Z A;  4A3I K;  4KN4 A;  1Y1W C;  4MEY A;  3GTP C;  1Y1W K;  3HOV C;  2E2H K;  2PMZ D;  3HOX K;  4A3K K;  3GTK C;  3HOV K;  3GTK K;  4LK0 A;  3HOU K;  5C4J K;  4A3E C;  4QJV A;  4A3L C;  5IP7 K;  4A3E K;  4AYB D;  3S2D C;  4Q5S A;  3GTQ C;  3H3V D;  4A3G C;  4KMU A;  3EQL A;  3GTQ K;  3S2H C;  4A3G K;  4A3M C;  3HOW C;  4C3H K;  1TWA C;  4QIW L;  4X6A C;  4A3M K;  3FKI K;  3HOW K;  4OIQ A;  3S2H K;  4BBS K;  3WOD A;  4G7H A;  2PA8 D;  3S17 C;  4Y7N K;  3RZO K;  5M3F K;  5IYC K;  3PO2 K;  4BY1 C;  2YU9 K;  4A3B C;  2R7Z C;  2A68 A;  4YFN A;  3S1N C;  1I6V A;  5IP9 K;  2R92 C;  4C3I K;  5IYD K;  1TWC C;  2NVQ C;  1I3Q C;  2JA6 C;  3S1M C;  4QJV B;  3S15 K;  2A69 A;  3RZD C;  4BBR K;  4LJZ A;  4LLG A;  4ZH4 A;  5FLM C;  2E2I C;  3I4N C;  3GTM K;  3I4N K;  1I50 K;  4A3I C;  2E2H C;  3HOX C;  4C2M K;  4A3K C;  2WAQ D;  3S16 K;  3DXJ A;  3HOU C;  3GTO K;  3PO3 K;  5C4J C;  5IP7 C;  1HQM A;  2WB1 L;  4OIN A;  3HKZ L;  4C3J K;  3H0G K;  4A93 K;  4C3H C;  5C44 K;  2VUM K;  3FKI C;  4BBS C;  2B63 K;  4MQ9 A;  2JA5 C;  2JA5 K;  4Y7N C;  2NVX K;  3RZO C;  3PO2 C;  5IYC C;  3I4M K;  1TWH K;  2YU9 C;  4YG2 A;  2NVY K;  4XLN A;  4A3F K;  3GTJ C;  3HOY K;  4MEX A;  3GTJ K;  2Y0S L;  3S1R K;  5IP9 C;  3HOZ K;  3S1Q C;  5C3E K;  3S1Q K;  4QIW D;  4C3I C;  2CW0 A;  3S15 C;  4JK1 A;  2JA7 K;  4BBR C;  5IYD C;  1Y1V C;  1Y1V K;  3GTM C;  1XPP A;  1I50 C;  4XSX A;  4Y52 C;  4Y52 K;  5TMC A;  4G7Z A;  4C2M C;  3S16 C;  1IW7 A;  5C4X K;  3GTO C;  3PO3 C;  5IYB K;  3GTL C;  3CQZ K;  1BDF A;  1YNN A;  3GTL K;  4C3J C;  4NOI A;  3H0G C;  4A93 C;  4OIP A;  4G7O A;  2JA8 K;  5C44 C;  4BY7 K;  1TWF K;  1R9T K;  2VUM C;  2E2J K;  2B63 C;  3M4O K;  3K7A C;  2NVX C;  2O5J A;  3K7A K;  5M3M K;  3I4M C;  2PMZ L;  5M5Y K;  1TWH C;  4OIR A;  2NVY C;  3M3Y C;  1YNJ A;  4A3F C;  1ZYR A;  2WB1 D;  3HOY C;  3M3Y K;  4AYB L;  3HKZ D;  3S1R C;  4A3C K;  4BXX K;  3H3V L;  1I6H K;  2PPB A;  3HOZ C;  4LK1 A;  5C3E C;  5FJ8 K;  2NVT K;  2R93 K;  1WCM K;  1K83 C;  1K83 K;  1SFO K;  2JA7 C;  2PA8 L;  3GTP K;  2A6E A;  4A3L K;  4A3D C;  4A3D K;  3S2D K;  2Y0S D;  1SMY A;  5C4X C;  5IYB C;  5D4D A;  3S14 C;  3CQZ C;  3S14 K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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