3RZDC

Rna polymerase ii initiation complex with a 5-nt rna
Total Genus 49
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
49
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Initiation complex structure and promoter proofreading.
pubmed doi rcsb
molecule tags Transcription/rna/dna
molecule keywords DNA-directed RNA polymerase II subunit RPB1
total genus 49
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-05-11

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3rzdC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3rzdC01
3HOYC 4A3IK 2E2IK 4A3DK 3K7AK 1WCMK 4OINA 3GTQK 2JA6K 2E2HC 5IYCK 3GTPK 3S16C 1TWCC 4A3FK 2CW0A 1ZYRA 3M4OC 5C4XC 1R9TK 4LK0A 2NVTK 3GTKK 2E2JC 4XLPA 3S17K 4YFXA 5IYDK 3PO2K 2VUMC 3S1NK 3HOUK 2JA8C 1SFOC 3HOZC 5FLMK 3CQZC 5IP7C 3H3VD 4LK1A 4C3IC 2NVYK 4XSZA 4A93C 3S14K 2B63K 3GTMK 1R9TC 3GTKC 1TWHC 5C4XK 2YU9C 5M3FK 3M4OK 3S17C 4JK1A 1BDFA 4A3EK 3RZDC 2E2JK 1I6HK 3PO3K 3S2HC 4X6AK 3DXJA 4G7HA 4G7ZA 2E2IC 5M5YK 1SMYA 4A3MK 4YFKA 3GTQC 4BBRC 3H0GK 4A3IC 2A68A 4KMUA 3HOYK 2NVTC 1HQMA 5C3EC 5IP7K 1I3QC 1TWAK 4LLGA 3GTOK 3GTJK 5M5XK 1YNJA 4XLNA 2BE5A 2R92C 3S15C 2Y0SL 3I4NC 5IYDC 4KN7A 4QIWD 3S1NC 1TWFK 3S2DK 3FKIK 2JA5K 3I4MK 4A3MC 3GTMC 2E2HK 1TWGC 4MEYA 2JA7K 4YFNA 4BBSC 5M5WK 4A3GC 2NVQC 5M3MK 2JA5C 3EQLA 4C2MC 3S1RC 5IP9K 4A3LK 3GTLC 4BY1K 2YU9K 1Y1VC 4BY7C 1WCMC 5C4JK 2R7ZK 4BBSK 3I4NK 1I6HC 4QJVA 3RZOC 3RZDK 1Y1WK 4Y7NK 4A3KK 3FKIC 5FLMC 3I4MC 1I6VA 4Q4ZA 3GTGC 2PA8D 1TWAC 1I3QK 2WAQL 2NVYC 1IW7A 1I50K 2A6HA 3HOXK 2PMZD 2VUMK 5C44K 2NVQK 3K7AC 5TMCA 2JA8K 4A3CK 4QJVB 4BY1C 2R7ZC 4QIWL 3GTOC 4C3JC 3GTLK 3HOWK 4YG2A 3S1RK 4A3FC 1TWCK 4X6AC 3S2HK 4A3BK 1TWFC 3S2DC 3S14C 2PA8L 4A93K 2WAQD 4A3CC 3HKZL 4AYBL 4OIPA 4XSXA 4A3JK 3S1MK 2R93K 1K83C 2O5JA 3PO3C 3HOXC 4A3LC 2O5IA 2A69A 3CQZK 5IYBK 3RZOK 4BBRK 4A3BC 4G7OA 1YNNA 4A3KC 3S1QC 5TMFA 1Y1VK 3HOWC 4BY7K 5IYBC 4Q5SA 5FJ8K 1Y1WC 2NVXK 2WB1D 5C44C 1K83K 4KN4A 5D4DA 1TWGK 2Y0SD 2R92K 3HOVC 4A3JC 4AYBD 4MEXA 3S1MC 3H3VL 4A3GK 4C3HK 2PPBA 3M3YC 4C3JK 5IYCC 2WB1L 3GTJC 4C3IK 4Y52C 4BXXK 4A3DC 2PMZL 4C2MK 3M3YK 1I50C 5C4JC 3H0GC 4A3EC 4OIQA 2R93C 4C3HC 4GZYA 5C3EK 4Y7NC 3HOVK 2JA7C 1XPPA 2NVXC 4OIRA 3S16K 3S15K 5IP9C 3HOZK 4BXXC 2JA6C 4Y52K 3HKZD 3S1QK 3WODA 2A6EA 4MQ9A 3PO2C 4ZH4A 1TWHK 2B63C 3GTPC 3GTGK 1SFOK 4OIOA 4LJZA 3HOUC 4NOIA
chains in the Genus database with same CATH superfamily
4A3DK 4OINA 2JA6K 2CW0A 1R9TK 2E2JC 3S17K 3PO2K 2VUMC 3S1NK 4WILA 1SFOC 4GT9A 5FLMK 5IP7C 3H3VD 4GTCA 4C3IC 2NVYK 4BLBA 3S14K 5C4XK 1TWHC 3CF5S 5M3FK 4A3EK 1L0WA 1I6HK 3S2HC 3BUEA 3DXJA 2E2IC 1SMYA 4WFBS 5L46A 1K83A 1DD5A 5JFEA 2XCRB 2JA7A 3OPFA 5JVOA 3ADAC 1J6XA 1O28A 3GTJK 1O26A 1GE9A 3S15C 4KN7A 1J6VA 1TWFK 4A3MC 2JA7K 4A3GC 2JA5C 5IOTA 2YU9K 4GTBA 4KB2A 4KATA 1XXBA 3I4NK 3RZDK 3AQPA 3VA7A 3H0GA 1XZPB 1TWAC 1I3QK 2NVYC 4IO9S 1XZPA 5C44K 3LYWA 1XZQA 3K7AC 5TMCA 4A3CK 3GTOC 1YX2A 3GTKA 4X6AC 1TWFC 3S14C 2WAQD 3HKZL 4XSXA 3HOXC 3BP3A 3CQZK 3ERED 1EFWA 2ZFZA 2EBBA 4G7OA 3S1QC 4ILDA 4KAWX 5EGHA 4Q5SA 5CJ9A 2P8TA 1WSVA 5C44C 1AB4A 1K83K 5D4DA 3AD7C 4MEXA 4LR2A 2P5MA 1USOA 1VLOA 1KQ4A 5IYCC 1WCMA 2L5NA 2PMZL 2GAHC 2FQOA 2R93A 2R93C 3A8IA 2GAGC 1JOEA 4GTAA 4WFAS 5IOSA 3S15K 1J6WA 3S16K 4BXXC 3LAJA 1O25A 2A6EA 4MQ9A 2RGRA 1DCOA 3GTGK 2KXYA 3HOUC 5E68A 2L3UA 2E2HA 4A3FK 1B4AA 5IYDK 1XZQB 2JA8C 3HOZC 2GSNA 3AH5A 3GTOA 4A93C 1R9TC 1WOSA 2YU9A 4JK1A 1BDFA 3PO3K 2ZJPS 4G7HA 4G7ZA 1XXAA 4A3IC 3HOYK 5IP7K 3G4AA 3V4GA 1F7VA 2R92A 1YNJA 3TFJA 2CFAA 2W7VA 3JSTA 3FKIK 2JA5K 3S0XA 3I4MK 1TWGC 4MEYA 1TWGA 5CHPA 4YFNA 4BBSC 2JA5A 3AD8C 4C2MC 3PIOS 4A3LK 3GTLC 4BY1K 2R7ZK 1X31C 1Y1WK 3RZOC 1ZQ1C 5FLMC 3FKIA 1I6VA 4Q4ZA 1BS2A 2PA8D 2B63K 3GTPK 4WJ4A 1IW7A 1I50K 1J98A 2NVQK 1PJ5A 2JA8K 3SZZA 1WQHA 1TWCK 3S2HK 5IORA 3GEIA 1TWFA 4A93K 4FZBA 4KM8A 4AYBL 4G0VA 3S1MK 2GSOA 3PO3C 4A3LC 4BLAA 3RZOK 5IOQA 4A3BC 1TWCA 1Y1VK 4IOAS 2JH3A 4BY7K 3HOWC 3FOFA 1BGWA 4KN4A 1TWGK 2Y0SD 1SFOA 4A3GK 4C3HK 1G51A 3M3YC 4Y52C 4C2MK 1C0AA 1O2BA 1YCLA 5C3EK 4Y7NC 3HOVK 2PHCB 3Q3QA 3OREA 1IQ0A 1O2AA 3MMLB 2JA6A 2JA6C 4KARA 4LQYA 1PJ7A 5DM6S 3GTPA 2B63A 2Y3PA 4OIOA 4P5BA 3TFHA 3K7AK 1WCMK 3GTQK 2E2HC 5IYCK 1TWCC 4GTEA 1INNA 1ZYRA 3M4OC 2NVTK 3GTKK 1UV7A 3HOUK 2NVYA 2ZJRS 4GTFA 1WOOA 4KMDA 4PABA 1XXCA 4G0UA 4DDQA 3GTMK 1IE0A 3CAGA 3N0BA 3S17C 2E2JK 3RZDC 4BKWA 4WJ3M 1EI6A 1ZBSA 5M5YK 3GTQC 2A68A 2V6TA 2NVTC 1VJEA 5C3EC 4LLGA 3GTOK 2ZUEA 3OEPA 3AD9C 3BP8C 1Y1WA 5IYDC 4QIWD 4GTDA 3S1NC 3GTMC 1F9NA 3LPXA 4M1XA 4J3NA 2CFAB 3S1RC 3GTLA 1WCMC 1Y1VA 3FHZA 1I6HC 4QJVA 4Y7NK 1F7UA 1EK8A 4A3KK 3PIPS 3HOXK 1B4BA 4U67S 2A6HA 4KB4A 3CQZA 4AH6A 4QJVB 4BY1C 2R7ZC 3GTLK 4C3JC 4YG2A 4A3FC 3GEEA 5TJ3A 1R9TA 4A3CC 5DM7S 1IS1A 4A3JK 2E2IA 1PJ6A 1JQWA 4KASA 2RH6A 2ZJQS 1FEUA 1WQFA 3LAPA 1YNNA 5TMFA 5HL7S 5IYBC 3A8KA 5FJ8K 1Y1WC 4WFNS 2NVXK 4P9SA 3T00A 4FM9A 2VUMA 3H3VL 3S1MC 4P5AA 3TFIA 1WORA 2D6FC 2WB1L 3GTJC 4A3DC 4KMAA 1I50C 5C4JC 1USMA 4A3EC 4GZYA 3GTGA 1TWAA 5HQHA 2NVXC 5IP9C 4Y52K 3HKZD 4KMHA 3WODA 5EGEA 3S1QK 1RU0A 1ZVUA 3PO2C 1BJTA 4ZH4A 3IPJA 2ZUFA 1WSRA 2B63C 3GTPC 1HI9A 1SFOK 4LJZA 4KDDA 3HOYC 1O2FB 4A3IK 2E2IK 1IBAA 1IL2A 1F93A 4C45A 3L4KA 3GSIA 3S16C 5C4XC 2KPUA 4LK0A 5JVHS 4KC6A 4XLPA 4YFXA 3GIRA 2FQTA 4G0WA 3CQZC 1EH1A 4LK1A 4XSZA 3L4JA 3GTKC 3M4OK 2YU9C 1TWHA 2V6UA 3NUHA 1JVIA 4X6AK 2KWAA 1WOPA 4A3MK 4YFKA 4GTLA 4BBRC 3H0GK 4KMUA 3N0CA 1HQMA 4XCHA 1I3QA 1I3QC 1TWAK 5M5XK 2R92C 4XLNA 2BE5A 3QX3A 2Y0SL 3I4NC 5HL8A 1WQGA 3S2DK 2E2HK 5M5WK 5M3MK 2NVQC 3EQLA 5IP9K 1ZXOA 3N3YA 1Y1VC 4BY7C 5C4JK 4BBSK 2GSUA 1I50A 2XCOA 1O29A 3FKIC 3I4MC 1VH2A 3GTGC 2WAQL 3HXAA 2PMZD 2VUMK 3FOEA 2KQ1A 4QIWL 4RMFA 3G4CA 3HOWK 3S1RK 5JVGS 3TTGA 4A3BK 3S2DC 1ISEA 2PA8L 4GFQA 4OIPA 4LOWA 2R93K 1K83C 2O5JA 1WIHA 3GTQA 2O5IA 2A69A 5IYBK 3A8JA 4BBRK 3GDZA 4A3KC 4PAAA 2WB1D 2XCQA 3T02A 2R92K 3HOVC 3DLLS 4AYBD 4A3JC 4WF9S 4IOCS 2PPBA 3GTMA 1DCPA 4C3JK 4C3IK 1O27A 3GTJA 4BXXK 3M3YK 4WCES 3H0GC 4OIQA 1VRQC 4C3HC 2JA7C 4O2DA 1XPPA 4OIRA 2NVXA 3SZYA 2R7ZA 3HOZK 1EQRA 1TWHK 1V5VA 3T01A 3GEHA 3AQOA 1DCHA 2V6SA 1O24A 1VGXA 4NOIA 4KM9A
chains in the Genus database with same CATH topology
3HOYC 4A3IK 2E2IK 4A3DK 3K7AK 1WCMK 4OINA 3GTQK 2JA6K 2E2HC 5IYCK 3GTPK 3S16C 1TWCC 4A3FK 2CW0A 1ZYRA 3M4OC 5C4XC 1R9TK 4LK0A 2NVTK 3GTKK 2E2JC 4XLPA 3S17K 4YFXA 5IYDK 3PO2K 2VUMC 3S1NK 3HOUK 2JA8C 1SFOC 3HOZC 5FLMK 3CQZC 5IP7C 3H3VD 4LK1A 4C3IC 2NVYK 4XSZA 4A93C 3S14K 2B63K 3GTMK 1R9TC 3GTKC 1TWHC 5C4XK 2YU9C 5M3FK 3M4OK 3S17C 4JK1A 1BDFA 4A3EK 3RZDC 2E2JK 1I6HK 3PO3K 3S2HC 4X6AK 3DXJA 4G7HA 4G7ZA 2E2IC 5M5YK 1SMYA 4A3MK 4YFKA 3GTQC 4BBRC 3H0GK 4A3IC 2A68A 4KMUA 3HOYK 2NVTC 1HQMA 5C3EC 5IP7K 1I3QC 1TWAK 4LLGA 3GTOK 3GTJK 5M5XK 1YNJA 4XLNA 2BE5A 2R92C 3S15C 2Y0SL 3I4NC 5IYDC 4KN7A 4QIWD 3S1NC 1TWFK 3S2DK 3FKIK 2JA5K 3I4MK 4A3MC 3GTMC 2E2HK 1TWGC 4MEYA 2JA7K 4YFNA 4BBSC 5M5WK 4A3GC 2NVQC 5M3MK 2JA5C 3EQLA 4C2MC 3S1RC 5IP9K 4A3LK 3GTLC 4BY1K 2YU9K 1Y1VC 4BY7C 1WCMC 5C4JK 2R7ZK 4BBSK 3I4NK 1I6HC 4QJVA 3RZOC 3RZDK 1Y1WK 4Y7NK 4A3KK 3FKIC 5FLMC 3I4MC 1I6VA 4Q4ZA 3GTGC 2PA8D 1TWAC 1I3QK 2WAQL 2NVYC 1IW7A 1I50K 2A6HA 3HOXK 2PMZD 2VUMK 5C44K 2NVQK 3K7AC 5TMCA 2JA8K 4A3CK 4QJVB 4BY1C 2R7ZC 4QIWL 3GTOC 4C3JC 3GTLK 3HOWK 4YG2A 3S1RK 4A3FC 1TWCK 4X6AC 3S2HK 4A3BK 1TWFC 3S2DC 3S14C 2PA8L 4A93K 2WAQD 4A3CC 3HKZL 4AYBL 4OIPA 4XSXA 4A3JK 3S1MK 2R93K 1K83C 2O5JA 3PO3C 3HOXC 4A3LC 2O5IA 2A69A 3CQZK 5IYBK 3RZOK 4BBRK 4A3BC 4G7OA 1YNNA 4A3KC 3S1QC 5TMFA 1Y1VK 3HOWC 4BY7K 5IYBC 4Q5SA 5FJ8K 1Y1WC 2NVXK 2WB1D 5C44C 1K83K 4KN4A 5D4DA 1TWGK 2Y0SD 2R92K 3HOVC 4A3JC 4AYBD 4MEXA 3S1MC 3H3VL 4A3GK 4C3HK 2PPBA 3M3YC 4C3JK 5IYCC 2WB1L 3GTJC 4C3IK 4Y52C 4BXXK 4A3DC 2PMZL 4C2MK 3M3YK 1I50C 5C4JC 3H0GC 4A3EC 4OIQA 2R93C 4C3HC 4GZYA 5C3EK 4Y7NC 3HOVK 2JA7C 1XPPA 2NVXC 4OIRA 3S16K 3S15K 5IP9C 3HOZK 4BXXC 2JA6C 4Y52K 3HKZD 3S1QK 3WODA 2A6EA 4MQ9A 3PO2C 4ZH4A 1TWHK 2B63C 3GTPC 3GTGK 1SFOK 4OIOA 4LJZA 3HOUC 4NOIA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3HOY C;  4A3I K;  2E2I K;  4A3D K;  3K7A K;  1WCM K;  4OIN A;  3GTQ K;  2JA6 K;  2E2H C;  5IYC K;  3GTP K;  3S16 C;  1TWC C;  4A3F K;  2CW0 A;  1ZYR A;  3M4O C;  5C4X C;  1R9T K;  4LK0 A;  2NVT K;  3GTK K;  2E2J C;  4XLP A;  3S17 K;  4YFX A;  5IYD K;  3PO2 K;  2VUM C;  3S1N K;  3HOU K;  2JA8 C;  1SFO C;  3HOZ C;  5FLM K;  3CQZ C;  5IP7 C;  3H3V D;  4LK1 A;  4C3I C;  2NVY K;  4XSZ A;  4A93 C;  3S14 K;  2B63 K;  3GTM K;  1R9T C;  3GTK C;  1TWH C;  5C4X K;  2YU9 C;  5M3F K;  3M4O K;  3S17 C;  4JK1 A;  1BDF A;  4A3E K;  3RZD C;  2E2J K;  1I6H K;  3PO3 K;  3S2H C;  4X6A K;  3DXJ A;  4G7H A;  4G7Z A;  2E2I C;  5M5Y K;  1SMY A;  4A3M K;  4YFK A;  3GTQ C;  4BBR C;  3H0G K;  4A3I C;  2A68 A;  4KMU A;  3HOY K;  2NVT C;  1HQM A;  5C3E C;  5IP7 K;  1I3Q C;  1TWA K;  4LLG A;  3GTO K;  3GTJ K;  5M5X K;  1YNJ A;  4XLN A;  2BE5 A;  2R92 C;  3S15 C;  2Y0S L;  3I4N C;  5IYD C;  4KN7 A;  4QIW D;  3S1N C;  1TWF K;  3S2D K;  3FKI K;  2JA5 K;  3I4M K;  4A3M C;  3GTM C;  2E2H K;  1TWG C;  4MEY A;  2JA7 K;  4YFN A;  4BBS C;  5M5W K;  4A3G C;  2NVQ C;  5M3M K;  2JA5 C;  3EQL A;  4C2M C;  3S1R C;  5IP9 K;  4A3L K;  3GTL C;  4BY1 K;  2YU9 K;  1Y1V C;  4BY7 C;  1WCM C;  5C4J K;  2R7Z K;  4BBS K;  3I4N K;  1I6H C;  4QJV A;  3RZO C;  3RZD K;  1Y1W K;  4Y7N K;  4A3K K;  3FKI C;  5FLM C;  3I4M C;  1I6V A;  4Q4Z A;  3GTG C;  2PA8 D;  1TWA C;  1I3Q K;  2WAQ L;  2NVY C;  1IW7 A;  1I50 K;  2A6H A;  3HOX K;  2PMZ D;  2VUM K;  5C44 K;  2NVQ K;  3K7A C;  5TMC A;  2JA8 K;  4A3C K;  4QJV B;  4BY1 C;  2R7Z C;  4QIW L;  3GTO C;  4C3J C;  3GTL K;  3HOW K;  4YG2 A;  3S1R K;  4A3F C;  1TWC K;  4X6A C;  3S2H K;  4A3B K;  1TWF C;  3S2D C;  3S14 C;  2PA8 L;  4A93 K;  2WAQ D;  4A3C C;  3HKZ L;  4AYB L;  4OIP A;  4XSX A;  4A3J K;  3S1M K;  2R93 K;  1K83 C;  2O5J A;  3PO3 C;  3HOX C;  4A3L C;  2O5I A;  2A69 A;  3CQZ K;  5IYB K;  3RZO K;  4BBR K;  4A3B C;  4G7O A;  1YNN A;  4A3K C;  3S1Q C;  5TMF A;  1Y1V K;  3HOW C;  4BY7 K;  5IYB C;  4Q5S A;  5FJ8 K;  1Y1W C;  2NVX K;  2WB1 D;  5C44 C;  1K83 K;  4KN4 A;  5D4D A;  1TWG K;  2Y0S D;  2R92 K;  3HOV C;  4A3J C;  4AYB D;  4MEX A;  3S1M C;  3H3V L;  4A3G K;  4C3H K;  2PPB A;  3M3Y C;  4C3J K;  5IYC C;  2WB1 L;  3GTJ C;  4C3I K;  4Y52 C;  4BXX K;  4A3D C;  2PMZ L;  4C2M K;  3M3Y K;  1I50 C;  5C4J C;  3H0G C;  4A3E C;  4OIQ A;  2R93 C;  4C3H C;  4GZY A;  5C3E K;  4Y7N C;  3HOV K;  2JA7 C;  1XPP A;  2NVX C;  4OIR A;  3S16 K;  3S15 K;  5IP9 C;  3HOZ K;  4BXX C;  2JA6 C;  4Y52 K;  3HKZ D;  3S1Q K;  3WOD A;  2A6E A;  4MQ9 A;  3PO2 C;  4ZH4 A;  1TWH K;  2B63 C;  3GTP C;  3GTG K;  1SFO K;  4OIO A;  4LJZ A;  3HOU C;  4NOI A; 
#chains in the Genus database with same CATH topology
 4A3D K;  4OIN A;  2JA6 K;  2CW0 A;  1R9T K;  2E2J C;  3S17 K;  3PO2 K;  2VUM C;  3S1N K;  4WIL A;  1SFO C;  4GT9 A;  5FLM K;  5IP7 C;  3H3V D;  4GTC A;  4C3I C;  2NVY K;  4BLB A;  3S14 K;  5C4X K;  1TWH C;  3CF5 S;  5M3F K;  4A3E K;  1L0W A;  1I6H K;  3S2H C;  3BUE A;  3DXJ A;  2E2I C;  1SMY A;  4WFB S;  5L46 A;  1K83 A;  1DD5 A;  5JFE A;  2XCR B;  2JA7 A;  3OPF A;  5JVO A;  3ADA C;  1J6X A;  1O28 A;  3GTJ K;  1O26 A;  1GE9 A;  3S15 C;  4KN7 A;  1J6V A;  1TWF K;  4A3M C;  2JA7 K;  4A3G C;  2JA5 C;  5IOT A;  2YU9 K;  4GTB A;  4KB2 A;  4KAT A;  1XXB A;  3I4N K;  3RZD K;  3AQP A;  3VA7 A;  3H0G A;  1XZP B;  1TWA C;  1I3Q K;  2NVY C;  4IO9 S;  1XZP A;  5C44 K;  3LYW A;  1XZQ A;  3K7A C;  5TMC A;  4A3C K;  3GTO C;  1YX2 A;  3GTK A;  4X6A C;  1TWF C;  3S14 C;  2WAQ D;  3HKZ L;  4XSX A;  3HOX C;  3BP3 A;  3CQZ K;  3ERE D;  1EFW A;  2ZFZ A;  2EBB A;  4G7O A;  3S1Q C;  4ILD A;  4KAW X;  5EGH A;  4Q5S A;  5CJ9 A;  2P8T A;  1WSV A;  5C44 C;  1AB4 A;  1K83 K;  5D4D A;  3AD7 C;  4MEX A;  4LR2 A;  2P5M A;  1USO A;  1VLO A;  1KQ4 A;  5IYC C;  1WCM A;  2L5N A;  2PMZ L;  2GAH C;  2FQO A;  2R93 A;  2R93 C;  3A8I A;  2GAG C;  1JOE A;  4GTA A;  4WFA S;  5IOS A;  3S15 K;  1J6W A;  3S16 K;  4BXX C;  3LAJ A;  1O25 A;  2A6E A;  4MQ9 A;  2RGR A;  1DCO A;  3GTG K;  2KXY A;  3HOU C;  5E68 A;  2L3U A;  2E2H A;  4A3F K;  1B4A A;  5IYD K;  1XZQ B;  2JA8 C;  3HOZ C;  2GSN A;  3AH5 A;  3GTO A;  4A93 C;  1R9T C;  1WOS A;  2YU9 A;  4JK1 A;  1BDF A;  3PO3 K;  2ZJP S;  4G7H A;  4G7Z A;  1XXA A;  4A3I C;  3HOY K;  5IP7 K;  3G4A A;  3V4G A;  1F7V A;  2R92 A;  1YNJ A;  3TFJ A;  2CFA A;  2W7V A;  3JST A;  3FKI K;  2JA5 K;  3S0X A;  3I4M K;  1TWG C;  4MEY A;  1TWG A;  5CHP A;  4YFN A;  4BBS C;  2JA5 A;  3AD8 C;  4C2M C;  3PIO S;  4A3L K;  3GTL C;  4BY1 K;  2R7Z K;  1X31 C;  1Y1W K;  3RZO C;  1ZQ1 C;  5FLM C;  3FKI A;  1I6V A;  4Q4Z A;  1BS2 A;  2PA8 D;  2B63 K;  3GTP K;  4WJ4 A;  1IW7 A;  1I50 K;  1J98 A;  2NVQ K;  1PJ5 A;  2JA8 K;  3SZZ A;  1WQH A;  1TWC K;  3S2H K;  5IOR A;  3GEI A;  1TWF A;  4A93 K;  4FZB A;  4KM8 A;  4AYB L;  4G0V A;  3S1M K;  2GSO A;  3PO3 C;  4A3L C;  4BLA A;  3RZO K;  5IOQ A;  4A3B C;  1TWC A;  1Y1V K;  4IOA S;  2JH3 A;  4BY7 K;  3HOW C;  3FOF A;  1BGW A;  4KN4 A;  1TWG K;  2Y0S D;  1SFO A;  4A3G K;  4C3H K;  1G51 A;  3M3Y C;  4Y52 C;  4C2M K;  1C0A A;  1O2B A;  1YCL A;  5C3E K;  4Y7N C;  3HOV K;  2PHC B;  3Q3Q A;  3ORE A;  1IQ0 A;  1O2A A;  3MML B;  2JA6 A;  2JA6 C;  4KAR A;  4LQY A;  1PJ7 A;  5DM6 S;  3GTP A;  2B63 A;  2Y3P A;  4OIO A;  4P5B A;  3TFH A;  3K7A K;  1WCM K;  3GTQ K;  2E2H C;  5IYC K;  1TWC C;  4GTE A;  1INN A;  1ZYR A;  3M4O C;  2NVT K;  3GTK K;  1UV7 A;  3HOU K;  2NVY A;  2ZJR S;  4GTF A;  1WOO A;  4KMD A;  4PAB A;  1XXC A;  4G0U A;  4DDQ A;  3GTM K;  1IE0 A;  3CAG A;  3N0B A;  3S17 C;  2E2J K;  3RZD C;  4BKW A;  4WJ3 M;  1EI6 A;  1ZBS A;  5M5Y K;  3GTQ C;  2A68 A;  2V6T A;  2NVT C;  1VJE A;  5C3E C;  4LLG A;  3GTO K;  2ZUE A;  3OEP A;  3AD9 C;  3BP8 C;  1Y1W A;  5IYD C;  4QIW D;  4GTD A;  3S1N C;  3GTM C;  1F9N A;  3LPX A;  4M1X A;  4J3N A;  2CFA B;  3S1R C;  3GTL A;  1WCM C;  1Y1V A;  3FHZ A;  1I6H C;  4QJV A;  4Y7N K;  1F7U A;  1EK8 A;  4A3K K;  3PIP S;  3HOX K;  1B4B A;  4U67 S;  2A6H A;  4KB4 A;  3CQZ A;  4AH6 A;  4QJV B;  4BY1 C;  2R7Z C;  3GTL K;  4C3J C;  4YG2 A;  4A3F C;  3GEE A;  5TJ3 A;  1R9T A;  4A3C C;  5DM7 S;  1IS1 A;  4A3J K;  2E2I A;  1PJ6 A;  1JQW A;  4KAS A;  2RH6 A;  2ZJQ S;  1FEU A;  1WQF A;  3LAP A;  1YNN A;  5TMF A;  5HL7 S;  5IYB C;  3A8K A;  5FJ8 K;  1Y1W C;  4WFN S;  2NVX K;  4P9S A;  3T00 A;  4FM9 A;  2VUM A;  3H3V L;  3S1M C;  4P5A A;  3TFI A;  1WOR A;  2D6F C;  2WB1 L;  3GTJ C;  4A3D C;  4KMA A;  1I50 C;  5C4J C;  1USM A;  4A3E C;  4GZY A;  3GTG A;  1TWA A;  5HQH A;  2NVX C;  5IP9 C;  4Y52 K;  3HKZ D;  4KMH A;  3WOD A;  5EGE A;  3S1Q K;  1RU0 A;  1ZVU A;  3PO2 C;  1BJT A;  4ZH4 A;  3IPJ A;  2ZUF A;  1WSR A;  2B63 C;  3GTP C;  1HI9 A;  1SFO K;  4LJZ A;  4KDD A;  3HOY C;  1O2F B;  4A3I K;  2E2I K;  1IBA A;  1IL2 A;  1F93 A;  4C45 A;  3L4K A;  3GSI A;  3S16 C;  5C4X C;  2KPU A;  4LK0 A;  5JVH S;  4KC6 A;  4XLP A;  4YFX A;  3GIR A;  2FQT A;  4G0W A;  3CQZ C;  1EH1 A;  4LK1 A;  4XSZ A;  3L4J A;  3GTK C;  3M4O K;  2YU9 C;  1TWH A;  2V6U A;  3NUH A;  1JVI A;  4X6A K;  2KWA A;  1WOP A;  4A3M K;  4YFK A;  4GTL A;  4BBR C;  3H0G K;  4KMU A;  3N0C A;  1HQM A;  4XCH A;  1I3Q A;  1I3Q C;  1TWA K;  5M5X K;  2R92 C;  4XLN A;  2BE5 A;  3QX3 A;  2Y0S L;  3I4N C;  5HL8 A;  1WQG A;  3S2D K;  2E2H K;  5M5W K;  5M3M K;  2NVQ C;  3EQL A;  5IP9 K;  1ZXO A;  3N3Y A;  1Y1V C;  4BY7 C;  5C4J K;  4BBS K;  2GSU A;  1I50 A;  2XCO A;  1O29 A;  3FKI C;  3I4M C;  1VH2 A;  3GTG C;  2WAQ L;  3HXA A;  2PMZ D;  2VUM K;  3FOE A;  2KQ1 A;  4QIW L;  4RMF A;  3G4C A;  3HOW K;  3S1R K;  5JVG S;  3TTG A;  4A3B K;  3S2D C;  1ISE A;  2PA8 L;  4GFQ A;  4OIP A;  4LOW A;  2R93 K;  1K83 C;  2O5J A;  1WIH A;  3GTQ A;  2O5I A;  2A69 A;  5IYB K;  3A8J A;  4BBR K;  3GDZ A;  4A3K C;  4PAA A;  2WB1 D;  2XCQ A;  3T02 A;  2R92 K;  3HOV C;  3DLL S;  4AYB D;  4A3J C;  4WF9 S;  4IOC S;  2PPB A;  3GTM A;  1DCP A;  4C3J K;  4C3I K;  1O27 A;  3GTJ A;  4BXX K;  3M3Y K;  4WCE S;  3H0G C;  4OIQ A;  1VRQ C;  4C3H C;  2JA7 C;  4O2D A;  1XPP A;  4OIR A;  2NVX A;  3SZY A;  2R7Z A;  3HOZ K;  1EQR A;  1TWH K;  1V5V A;  3T01 A;  3GEH A;  3AQO A;  1DCH A;  2V6S A;  1O24 A;  1VGX A;  4NOI A;  4KM9 A; 
#chains in the Genus database with same CATH homology
 3HOY C;  4A3I K;  2E2I K;  4A3D K;  3K7A K;  1WCM K;  4OIN A;  3GTQ K;  2JA6 K;  2E2H C;  5IYC K;  3GTP K;  3S16 C;  1TWC C;  4A3F K;  2CW0 A;  1ZYR A;  3M4O C;  5C4X C;  1R9T K;  4LK0 A;  2NVT K;  3GTK K;  2E2J C;  4XLP A;  3S17 K;  4YFX A;  5IYD K;  3PO2 K;  2VUM C;  3S1N K;  3HOU K;  2JA8 C;  1SFO C;  3HOZ C;  5FLM K;  3CQZ C;  5IP7 C;  3H3V D;  4LK1 A;  4C3I C;  2NVY K;  4XSZ A;  4A93 C;  3S14 K;  2B63 K;  3GTM K;  1R9T C;  3GTK C;  1TWH C;  5C4X K;  2YU9 C;  5M3F K;  3M4O K;  3S17 C;  4JK1 A;  1BDF A;  4A3E K;  3RZD C;  2E2J K;  1I6H K;  3PO3 K;  3S2H C;  4X6A K;  3DXJ A;  4G7H A;  4G7Z A;  2E2I C;  5M5Y K;  1SMY A;  4A3M K;  4YFK A;  3GTQ C;  4BBR C;  3H0G K;  4A3I C;  2A68 A;  4KMU A;  3HOY K;  2NVT C;  1HQM A;  5C3E C;  5IP7 K;  1I3Q C;  1TWA K;  4LLG A;  3GTO K;  3GTJ K;  5M5X K;  1YNJ A;  4XLN A;  2BE5 A;  2R92 C;  3S15 C;  2Y0S L;  3I4N C;  5IYD C;  4KN7 A;  4QIW D;  3S1N C;  1TWF K;  3S2D K;  3FKI K;  2JA5 K;  3I4M K;  4A3M C;  3GTM C;  2E2H K;  1TWG C;  4MEY A;  2JA7 K;  4YFN A;  4BBS C;  5M5W K;  4A3G C;  2NVQ C;  5M3M K;  2JA5 C;  3EQL A;  4C2M C;  3S1R C;  5IP9 K;  4A3L K;  3GTL C;  4BY1 K;  2YU9 K;  1Y1V C;  4BY7 C;  1WCM C;  5C4J K;  2R7Z K;  4BBS K;  3I4N K;  1I6H C;  4QJV A;  3RZO C;  3RZD K;  1Y1W K;  4Y7N K;  4A3K K;  3FKI C;  5FLM C;  3I4M C;  1I6V A;  4Q4Z A;  3GTG C;  2PA8 D;  1TWA C;  1I3Q K;  2WAQ L;  2NVY C;  1IW7 A;  1I50 K;  2A6H A;  3HOX K;  2PMZ D;  2VUM K;  5C44 K;  2NVQ K;  3K7A C;  5TMC A;  2JA8 K;  4A3C K;  4QJV B;  4BY1 C;  2R7Z C;  4QIW L;  3GTO C;  4C3J C;  3GTL K;  3HOW K;  4YG2 A;  3S1R K;  4A3F C;  1TWC K;  4X6A C;  3S2H K;  4A3B K;  1TWF C;  3S2D C;  3S14 C;  2PA8 L;  4A93 K;  2WAQ D;  4A3C C;  3HKZ L;  4AYB L;  4OIP A;  4XSX A;  4A3J K;  3S1M K;  2R93 K;  1K83 C;  2O5J A;  3PO3 C;  3HOX C;  4A3L C;  2O5I A;  2A69 A;  3CQZ K;  5IYB K;  3RZO K;  4BBR K;  4A3B C;  4G7O A;  1YNN A;  4A3K C;  3S1Q C;  5TMF A;  1Y1V K;  3HOW C;  4BY7 K;  5IYB C;  4Q5S A;  5FJ8 K;  1Y1W C;  2NVX K;  2WB1 D;  5C44 C;  1K83 K;  4KN4 A;  5D4D A;  1TWG K;  2Y0S D;  2R92 K;  3HOV C;  4A3J C;  4AYB D;  4MEX A;  3S1M C;  3H3V L;  4A3G K;  4C3H K;  2PPB A;  3M3Y C;  4C3J K;  5IYC C;  2WB1 L;  3GTJ C;  4C3I K;  4Y52 C;  4BXX K;  4A3D C;  2PMZ L;  4C2M K;  3M3Y K;  1I50 C;  5C4J C;  3H0G C;  4A3E C;  4OIQ A;  2R93 C;  4C3H C;  4GZY A;  5C3E K;  4Y7N C;  3HOV K;  2JA7 C;  1XPP A;  2NVX C;  4OIR A;  3S16 K;  3S15 K;  5IP9 C;  3HOZ K;  4BXX C;  2JA6 C;  4Y52 K;  3HKZ D;  3S1Q K;  3WOD A;  2A6E A;  4MQ9 A;  3PO2 C;  4ZH4 A;  1TWH K;  2B63 C;  3GTP C;  3GTG K;  1SFO K;  4OIO A;  4LJZ A;  3HOU C;  4NOI A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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