3RZDC

Rna polymerase ii initiation complex with a 5-nt rna
Total Genus 49
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
49
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Initiation complex structure and promoter proofreading.
pubmed doi rcsb
molecule tags Transcription/rna/dna
total genus 49
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-05-11

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3rzdC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3rzdC01
2Y0SD 5C3EC 4QJVB 5C4JK 2JA5C 2E2HK 2YU9K 2PPBA 1I6VA 4YFXA 3GTPC 1TWAK 3H3VL 1I50C 3S2HK 3CQZC 3GTLC 3GTMC 4A3LC 3GTGK 2JA7C 1R9TK 3HOXC 2B63K 3HOVK 4C3IC 3S1MC 4C3HC 3S1NC 3GTQC 1I6HC 5TMFA 2A69A 2BE5A 3HOUK 4A3GK 2NVXC 2NVQC 3HKZD 4A3DC 4BY7C 5M5YK 4YFKA 2E2IK 3S15K 2NVYC 4NOIA 2NVTK 3S2DK 4XLNA 2O5IA 3S17K 4JK1A 2R93K 2E2JC 4G7OA 4MEXA 4A3CK 1TWFK 1K83C 3HOZC 3HOYC 3GTKK 1WCMC 4XLPA 4Q5SA 3S1QC 3FKIC 1TWHK 4C3JK 2PMZD 4MEYA 1TWGK 3H0GK 2WAQL 1IW7A 3HKZL 3GTJC 2R92K 5C3EK 1SMYA 2A68A 3S15C 2JA5K 1HQMA 3GTPK 4BBSK 5FLMC 1I50K 4Y52K 3CQZK 1Y1VC 4LLGA 2A6HA 5M5WK 3GTMK 5IYDC 2JA7K 1TWCC 2VUMC 5M5XK 4A3EK 3HOXK 5C44C 4A3IK 5D4DA 4C3IK 4A3BC 2PMZL 3RZOC 2WAQD 3S16K 3S1MK 2O5JA 3S1NK 3WODA 3S14C 4X6AC 5IP7C 4A3JC 3GTOC 2E2HC 1YNJA 5C4XC 3M3YK 4LJZA 1I6HK 3M4OC 1SFOK 5IYBC 2NVXK 4A3DK 4BY7K 3GTGC 4BY1C 4A3FK 3S1RC 2B63C 4YFNA 4C2MC 3PO2C 5FJ8K 2JA8K 4AYBD 4A93C 3K7AC 2E2JK 3HOYK 4BXXK 3HOWK 4A3MC 5M3MK 4OIOA 3I4MC 5TMCA 3PO3C 3FKIK 5IYCK 3S1QK 2R7ZC 2JA6C 1I3QC 2WB1D 4A3KC 3RZDC 3GTLK 3GTJK 2NVTC 2R7ZK 5IP9C 4BBRC 4A3LK 4GZYA 4Y7NC 3GTKC 3I4NC 4AYBL 4ZH4A 1XPPA 1Y1VK 4LK0A 4KN4A 1Y1WC 4MQ9A 4Q4ZA 4C3HK 2CW0A 5IYDK 2VUMK 5C4JC 2YU9C 3H0GC 5C44K 3GTQK 1TWAC 3RZOK 3S2HC 2NVQK 3S14K 4X6AK 4OIRA 2WB1L 5IP7K 4KMUA 4QIWD 4A3JK 5C4XK 3GTOK 2NVYK 1R9TC 4Y52C 4OIQA 3HOVC 4BBSC 3M4OK 5IYBK 4G7HA 4XSXA 4XSZA 1K83K 4BY1K 3HOZK 4A3EC 4A3IC 3S1RK 4C2MK 3PO2K 2A6EA 3DXJA 1WCMK 2PA8D 3HOUC 3S16C 4A3GC 4A93K 3K7AK 4A3MK 2E2IC 3M3YC 3I4MK 1YNNA 3PO3K 1SFOC 3H3VD 2Y0SL 3EQLA 4OIPA 4OINA 3S17C 3S2DC 4G7ZA 4QIWL 4LK1A 2R93C 5M3FK 4A3CC 2JA6K 1I3QK 1TWFC 4A3KK 4YG2A 4A3FC 5FLMK 1BDFA 3RZDK 2JA8C 5IP9K 1ZYRA 1TWHC 4C3JC 4BBRK 4QJVA 1TWCK 4Y7NK 1TWGC 3I4NK 2PA8L 4BXXC 3HOWC 4A3BK 4KN7A 5IYCC 1Y1WK 2R92C
chains in the Genus database with same CATH superfamily
4WJ4A 4GTBA 2GSUA 2E2HK 1DCOA 1V5VA 3AD9C 4LQYA 2KWAA 2ZFZA 4WJ3M 3IPJA 2BE5A 2NVQC 3HKZD 1RU0A 2E2IK 2E2IA 3S0XA 2NVTK 3S2DK 2R93K 4G7OA 2R93A 3GTKK 2L3UA 4KC6A 4Q5SA 3FKIC 4C3JK 4KATA 3H0GK 1PJ6A 2WAQL 2V6UA 2KQ1A 3GTJC 4U67S 1VJEA 1SMYA 3GTPK 4Y52K 3GTPA 1F9NA 3A8JA 1IE0A 1X31C 3HOXK 5D4DA 4A3BC 1HI9A 3RZOC 2WAQD 4WILA 3S1NK 3WODA 5IP7C 4A3JC 2RGRA 4IO9S 3QX3A 1SFOK 5IYBC 1J6XA 1KQ4A 4P5BA 3PO2C 2B63C 4YFNA 1ZQ1C 5FJ8K 2JA8K 3K7AC 2Y3PA 1O24A 3G4AA 4A3MC 3HOWK 1ZBSA 3GDZA 3AH5A 2JA6C 4A3KC 2WB1D 2JH3A 3GTLK 4WFBS 4XCHA 4LR2A 4ZH4A 1Y1VK 1Y1VA 4RMFA 5IYDK 1XXCA 3HXAA 5C4JC 2YU9C 5C44K 3S2HC 5CJ9A 4X6AK 4QIWD 4GTAA 5C4XK 1USOA 2NVYK 4M1XA 4BKWA 1ZVUA 1O28A 4XSXA 1J98A 4XSZA 3T00A 3HOZK 3GTGA 4A3IC 4C2MK 3DXJA 2PA8D 3HOUC 2V6SA 4A93K 1GE9A 3M3YC 4FZBA 3CF5S 3AD8C 5L46A 3I4MK 5DM6S 3PO3K 1BGWA 2ZUFA 3A8KA 4LK1A 1ZYRA 1TWHC 4BBRK 2GAHC 3BP8C 1TWCK 4Y7NK 1IBAA 1TWGC 3I4NK 3N0BA 5IYCC 5C3EC 1ZXOA 4QJVB 1YX2A 1I50C 1BS2A 4KDDA 2FQOA 3LPXA 4A3LC 2JA7C 1R9TK 3JSTA 1R9TA 3BUEA 1DCPA 3GTQC 2NVXC 1O2FB 4KM8A 1AB4A 2FQTA 3TTGA 2XCRB 3SZZA 4XLNA 2O5IA 3S17K 2E2JC 4MEXA 5DM7S 4KM9A 1K83C 4KB2A 1WCMC 4IOAS 2PMZD 4MEYA 2KPUA 3HKZL 3A8IA 2R92K 2R92A 3GEIA 4BBSK 4G0UA 5E68A 4GTDA 1WOPA 5M5WK 4GTFA 3GSIA 4O2DA 2GSNA 5JVOA 5IOQA 2E2HC 1YNJA 3AQPA 2XCQA 4GTEA 4A3FK 4AYBD 2W7VA 1VLOA 4BXXK 4OIOA 3LAJA 5TMCA 3ADAC 3FKIK 3GEHA 3FKIA 4GTLA 1I3QC 1F7UA 4DDQA 3RZDC 3GTJK 2NVTC 3GTJA 3GTKC 4C3HK 1WOSA 3H0GC 1TWAC 3RZOK 2ZJRS 1O25A 2WB1L 5IP7K 4A3JK 3TFIA 2ZJQS 1EQRA 4Y52C 4OIQA 3HOVC 5IYBK 3PO2K 2B63A 4A3GC 5JVHS 3K7AK 5HQHA 4A3MK 1YNNA 1SFOC 3H3VD 2Y0SL 4OIPA 4OINA 4QIWL 2P5MA 3S15K 4A3CC 4P9SA 3TFHA 1TWFC 4A3KK 2JA6K 2JA6A 5TJ3A 5FLMK 2JA8C 1O29A 4QJVA 2GSOA 2PA8L 3HOWC 1F7VA 2GAGC 4KN7A 3FHZA 5HL8A 2Y0SD 5C4JK 2JA5C 2YU9K 2PPBA 2YU9A 4YFXA 3S2HK 3CQZC 3GTLC 3GTMC 3SZYA 1WQGA 3GTGK 3LYWA 3OEPA 1WQFA 3AQOA 4C3IC 3S1MC 3NUHA 2PHCB 1EFWA 1YCLA 3VA7A 1EI6A 1I6HC 1DD5A 4GTCA 3HOUK 2A69A 4A3DC 4BY7C 5M5YK 1JQWA 2NVYC 5EGEA 4NOIA 4BLAA 3HOZC 3HOYC 4XLPA 3S1QC 1TWHK 1TWHA 4KAWX 1TWGK 3ERED 1TWGA 3OREA 3GEEA 1IW7A 4GFQA 5C3EK 2A68A 4KARA 4AH6A 1HQMA 1I50K 1I50A 2A6HA 1O2AA 5IOTA 3N3YA 3MMLB 4G0VA 2JA7K 1TWCC 2VUMC 4A3EK 3FOEA 2JA7A 1IS1A 1WIHA 2PMZL 3S16K 4KB4A 3S14C 3GTOC 1XZQB 3GTQA 3M4OC 2NVXK 2NVXA 4BY1C 4G0WA 3S1RC 2E2JK 1WSVA 1K83A 5M3MK 4LOWA 1WCMA 1O27A 2R7ZC 1FEUA 3LAPA 4KASA 1IQ0A 5IP9C 1VH2A 2EBBA 3OPFA 4GZYA 4KMDA 1C0AA 4AYBL 1XPPA 1Y1WC 4MQ9A 4Q4ZA 2CW0A 3TFJA 4WFNS 2P8TA 3FOFA 4J3NA 2NVQK 1WOOA 4OIRA 2E2HA 3L4JA 4BBSC 1O26A 5IOSA 1EK8A 1L0WA 4ILDA 4C45A 2E2IC 1J6VA 3S2DC 4G7ZA 2R93C 5M3FK 1I3QK 4YG2A 4A3FC 1I3QA 1BDFA 3CAGA 3RZDK 1XZPA 4C3JC 3T02A 4P5AA 4BXXC 1ISEA 3GTKA 4A3BK 4PABA 2RH6A 1I6VA 3GTPC 1TWAK 3H0GA 3H3VL 1TWAA 1EH1A 1IL2A 1WSRA 2L5NA 3N0CA 4BLBA 2B63K 3HOXC 3HOVK 5HL7S 4C3HC 3S1NC 3PIOS 1UV7A 5TMFA 4A3GK 1B4AA 2ZJPS 3V4GA 1DCHA 2V6TA 4YFKA 1VGXA 1SFOA 4JK1A 4A3CK 1TWFK 3PIPS 5JVGS 1TWFA 3BP3A 1O2BA 1XZPB 1XXAA 4IOCS 3G4CA 5EGHA 3S15C 2JA5K 4WCES 2JA5A 5FLMC 3CQZK 1Y1VC 4LLGA 1WQHA 3CQZA 3GTLA 1B4BA 3GTMK 5IYDC 3GTMA 5M5XK 1XZQA 3L4KA 4A3IK 5C44C 3T01A 4C3IK 3S1MK 2O5JA 4X6AC 5C4XC 2CFAA 3M3YK 4LJZA 1I6HK 4A3DK 4BY7K 3GTGC 3GIRA 4C2MC 2NVYA 4A93C 1BJTA 3HOYK 3I4MC 1PJ7A 3PO3C 5IYCK 4KMHA 5JFEA 3S1QK 2XCOA 4BBRC 4A3LK 4FM9A 4Y7NC 5IORA 3I4NC 4LK0A 4KN4A 2VUMK 1TWCA 3GTQK 2VUMA 1G51A 1JVIA 2ZUEA 3S14K 3Q3QA 4KMUA 3AD7C 3GTOK 2CFAB 3GTOA 1JOEA 2KXYA 1R9TC 3M4OK 1PJ5A 4G7HA 1J6WA 4KMAA 1K83K 4BY1K 4A3EC 3S1RK 1VRQC 2A6EA 1WCMK 4WFAS 3S16C 1F93A 4WF9S 3DLLS 1INNA 3EQLA 3S17C 4PAAA 2R7ZK 1XXBA 5CHPA 2R7ZA 2D6FC 1WORA 5IP9K 1USMA 1Y1WK 2R92C 4GT9A 1Y1WA
chains in the Genus database with same CATH topology
2Y0SD 5C3EC 4QJVB 5C4JK 2JA5C 2E2HK 2YU9K 2PPBA 1I6VA 4YFXA 3GTPC 1TWAK 3H3VL 1I50C 3S2HK 3CQZC 3GTLC 3GTMC 4A3LC 3GTGK 2JA7C 1R9TK 3HOXC 2B63K 3HOVK 4C3IC 3S1MC 4C3HC 3S1NC 3GTQC 1I6HC 5TMFA 2A69A 2BE5A 3HOUK 4A3GK 2NVXC 2NVQC 3HKZD 4A3DC 4BY7C 5M5YK 4YFKA 2E2IK 3S15K 2NVYC 4NOIA 2NVTK 3S2DK 4XLNA 2O5IA 3S17K 4JK1A 2R93K 2E2JC 4G7OA 4MEXA 4A3CK 1TWFK 1K83C 3HOZC 3HOYC 3GTKK 1WCMC 4XLPA 4Q5SA 3S1QC 3FKIC 1TWHK 4C3JK 2PMZD 4MEYA 1TWGK 3H0GK 2WAQL 1IW7A 3HKZL 3GTJC 2R92K 5C3EK 1SMYA 2A68A 3S15C 2JA5K 1HQMA 3GTPK 4BBSK 5FLMC 1I50K 4Y52K 3CQZK 1Y1VC 4LLGA 2A6HA 5M5WK 3GTMK 5IYDC 2JA7K 1TWCC 2VUMC 5M5XK 4A3EK 3HOXK 5C44C 4A3IK 5D4DA 4C3IK 4A3BC 2PMZL 3RZOC 2WAQD 3S16K 3S1MK 2O5JA 3S1NK 3WODA 3S14C 4X6AC 5IP7C 4A3JC 3GTOC 2E2HC 1YNJA 5C4XC 3M3YK 4LJZA 1I6HK 3M4OC 1SFOK 5IYBC 2NVXK 4A3DK 4BY7K 3GTGC 4BY1C 4A3FK 3S1RC 2B63C 4YFNA 4C2MC 3PO2C 5FJ8K 2JA8K 4AYBD 4A93C 3K7AC 2E2JK 3HOYK 4BXXK 3HOWK 4A3MC 5M3MK 4OIOA 3I4MC 5TMCA 3PO3C 3FKIK 5IYCK 3S1QK 2R7ZC 2JA6C 1I3QC 2WB1D 4A3KC 3RZDC 3GTLK 3GTJK 2NVTC 2R7ZK 5IP9C 4BBRC 4A3LK 4GZYA 4Y7NC 3GTKC 3I4NC 4AYBL 4ZH4A 1XPPA 1Y1VK 4LK0A 4KN4A 1Y1WC 4MQ9A 4Q4ZA 4C3HK 2CW0A 5IYDK 2VUMK 5C4JC 2YU9C 3H0GC 5C44K 3GTQK 1TWAC 3RZOK 3S2HC 2NVQK 3S14K 4X6AK 4OIRA 2WB1L 5IP7K 4KMUA 4QIWD 4A3JK 5C4XK 3GTOK 2NVYK 1R9TC 4Y52C 4OIQA 3HOVC 4BBSC 3M4OK 5IYBK 4G7HA 4XSXA 4XSZA 1K83K 4BY1K 3HOZK 4A3EC 4A3IC 3S1RK 4C2MK 3PO2K 2A6EA 3DXJA 1WCMK 2PA8D 3HOUC 3S16C 4A3GC 4A93K 3K7AK 4A3MK 2E2IC 3M3YC 3I4MK 1YNNA 3PO3K 1SFOC 3H3VD 2Y0SL 3EQLA 4OIPA 4OINA 3S17C 3S2DC 4G7ZA 4QIWL 4LK1A 2R93C 5M3FK 4A3CC 2JA6K 1I3QK 1TWFC 4A3KK 4YG2A 4A3FC 5FLMK 1BDFA 3RZDK 2JA8C 5IP9K 1ZYRA 1TWHC 4C3JC 4BBRK 4QJVA 1TWCK 4Y7NK 1TWGC 3I4NK 2PA8L 4BXXC 3HOWC 4A3BK 4KN7A 5IYCC 1Y1WK 2R92C
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2Y0S D;  5C3E C;  4QJV B;  5C4J K;  2JA5 C;  2E2H K;  2YU9 K;  2PPB A;  1I6V A;  4YFX A;  3GTP C;  1TWA K;  3H3V L;  1I50 C;  3S2H K;  3CQZ C;  3GTL C;  3GTM C;  4A3L C;  3GTG K;  2JA7 C;  1R9T K;  3HOX C;  2B63 K;  3HOV K;  4C3I C;  3S1M C;  4C3H C;  3S1N C;  3GTQ C;  1I6H C;  5TMF A;  2A69 A;  2BE5 A;  3HOU K;  4A3G K;  2NVX C;  2NVQ C;  3HKZ D;  4A3D C;  4BY7 C;  5M5Y K;  4YFK A;  2E2I K;  3S15 K;  2NVY C;  4NOI A;  2NVT K;  3S2D K;  4XLN A;  2O5I A;  3S17 K;  4JK1 A;  2R93 K;  2E2J C;  4G7O A;  4MEX A;  4A3C K;  1TWF K;  1K83 C;  3HOZ C;  3HOY C;  3GTK K;  1WCM C;  4XLP A;  4Q5S A;  3S1Q C;  3FKI C;  1TWH K;  4C3J K;  2PMZ D;  4MEY A;  1TWG K;  3H0G K;  2WAQ L;  1IW7 A;  3HKZ L;  3GTJ C;  2R92 K;  5C3E K;  1SMY A;  2A68 A;  3S15 C;  2JA5 K;  1HQM A;  3GTP K;  4BBS K;  5FLM C;  1I50 K;  4Y52 K;  3CQZ K;  1Y1V C;  4LLG A;  2A6H A;  5M5W K;  3GTM K;  5IYD C;  2JA7 K;  1TWC C;  2VUM C;  5M5X K;  4A3E K;  3HOX K;  5C44 C;  4A3I K;  5D4D A;  4C3I K;  4A3B C;  2PMZ L;  3RZO C;  2WAQ D;  3S16 K;  3S1M K;  2O5J A;  3S1N K;  3WOD A;  3S14 C;  4X6A C;  5IP7 C;  4A3J C;  3GTO C;  2E2H C;  1YNJ A;  5C4X C;  3M3Y K;  4LJZ A;  1I6H K;  3M4O C;  1SFO K;  5IYB C;  2NVX K;  4A3D K;  4BY7 K;  3GTG C;  4BY1 C;  4A3F K;  3S1R C;  2B63 C;  4YFN A;  4C2M C;  3PO2 C;  5FJ8 K;  2JA8 K;  4AYB D;  4A93 C;  3K7A C;  2E2J K;  3HOY K;  4BXX K;  3HOW K;  4A3M C;  5M3M K;  4OIO A;  3I4M C;  5TMC A;  3PO3 C;  3FKI K;  5IYC K;  3S1Q K;  2R7Z C;  2JA6 C;  1I3Q C;  2WB1 D;  4A3K C;  3RZD C;  3GTL K;  3GTJ K;  2NVT C;  2R7Z K;  5IP9 C;  4BBR C;  4A3L K;  4GZY A;  4Y7N C;  3GTK C;  3I4N C;  4AYB L;  4ZH4 A;  1XPP A;  1Y1V K;  4LK0 A;  4KN4 A;  1Y1W C;  4MQ9 A;  4Q4Z A;  4C3H K;  2CW0 A;  5IYD K;  2VUM K;  5C4J C;  2YU9 C;  3H0G C;  5C44 K;  3GTQ K;  1TWA C;  3RZO K;  3S2H C;  2NVQ K;  3S14 K;  4X6A K;  4OIR A;  2WB1 L;  5IP7 K;  4KMU A;  4QIW D;  4A3J K;  5C4X K;  3GTO K;  2NVY K;  1R9T C;  4Y52 C;  4OIQ A;  3HOV C;  4BBS C;  3M4O K;  5IYB K;  4G7H A;  4XSX A;  4XSZ A;  1K83 K;  4BY1 K;  3HOZ K;  4A3E C;  4A3I C;  3S1R K;  4C2M K;  3PO2 K;  2A6E A;  3DXJ A;  1WCM K;  2PA8 D;  3HOU C;  3S16 C;  4A3G C;  4A93 K;  3K7A K;  4A3M K;  2E2I C;  3M3Y C;  3I4M K;  1YNN A;  3PO3 K;  1SFO C;  3H3V D;  2Y0S L;  3EQL A;  4OIP A;  4OIN A;  3S17 C;  3S2D C;  4G7Z A;  4QIW L;  4LK1 A;  2R93 C;  5M3F K;  4A3C C;  2JA6 K;  1I3Q K;  1TWF C;  4A3K K;  4YG2 A;  4A3F C;  5FLM K;  1BDF A;  3RZD K;  2JA8 C;  5IP9 K;  1ZYR A;  1TWH C;  4C3J C;  4BBR K;  4QJV A;  1TWC K;  4Y7N K;  1TWG C;  3I4N K;  2PA8 L;  4BXX C;  3HOW C;  4A3B K;  4KN7 A;  5IYC C;  1Y1W K;  2R92 C; 
#chains in the Genus database with same CATH topology
 4WJ4 A;  4GTB A;  2GSU A;  2E2H K;  1DCO A;  1V5V A;  3AD9 C;  4LQY A;  2KWA A;  2ZFZ A;  4WJ3 M;  3IPJ A;  2BE5 A;  2NVQ C;  3HKZ D;  1RU0 A;  2E2I K;  2E2I A;  3S0X A;  2NVT K;  3S2D K;  2R93 K;  4G7O A;  2R93 A;  3GTK K;  2L3U A;  4KC6 A;  4Q5S A;  3FKI C;  4C3J K;  4KAT A;  3H0G K;  1PJ6 A;  2WAQ L;  2V6U A;  2KQ1 A;  3GTJ C;  4U67 S;  1VJE A;  1SMY A;  3GTP K;  4Y52 K;  3GTP A;  1F9N A;  3A8J A;  1IE0 A;  1X31 C;  3HOX K;  5D4D A;  4A3B C;  1HI9 A;  3RZO C;  2WAQ D;  4WIL A;  3S1N K;  3WOD A;  5IP7 C;  4A3J C;  2RGR A;  4IO9 S;  3QX3 A;  1SFO K;  5IYB C;  1J6X A;  1KQ4 A;  4P5B A;  3PO2 C;  2B63 C;  4YFN A;  1ZQ1 C;  5FJ8 K;  2JA8 K;  3K7A C;  2Y3P A;  1O24 A;  3G4A A;  4A3M C;  3HOW K;  1ZBS A;  3GDZ A;  3AH5 A;  2JA6 C;  4A3K C;  2WB1 D;  2JH3 A;  3GTL K;  4WFB S;  4XCH A;  4LR2 A;  4ZH4 A;  1Y1V K;  1Y1V A;  4RMF A;  5IYD K;  1XXC A;  3HXA A;  5C4J C;  2YU9 C;  5C44 K;  3S2H C;  5CJ9 A;  4X6A K;  4QIW D;  4GTA A;  5C4X K;  1USO A;  2NVY K;  4M1X A;  4BKW A;  1ZVU A;  1O28 A;  4XSX A;  1J98 A;  4XSZ A;  3T00 A;  3HOZ K;  3GTG A;  4A3I C;  4C2M K;  3DXJ A;  2PA8 D;  3HOU C;  2V6S A;  4A93 K;  1GE9 A;  3M3Y C;  4FZB A;  3CF5 S;  3AD8 C;  5L46 A;  3I4M K;  5DM6 S;  3PO3 K;  1BGW A;  2ZUF A;  3A8K A;  4LK1 A;  1ZYR A;  1TWH C;  4BBR K;  2GAH C;  3BP8 C;  1TWC K;  4Y7N K;  1IBA A;  1TWG C;  3I4N K;  3N0B A;  5IYC C;  5C3E C;  1ZXO A;  4QJV B;  1YX2 A;  1I50 C;  1BS2 A;  4KDD A;  2FQO A;  3LPX A;  4A3L C;  2JA7 C;  1R9T K;  3JST A;  1R9T A;  3BUE A;  1DCP A;  3GTQ C;  2NVX C;  1O2F B;  4KM8 A;  1AB4 A;  2FQT A;  3TTG A;  2XCR B;  3SZZ A;  4XLN A;  2O5I A;  3S17 K;  2E2J C;  4MEX A;  5DM7 S;  4KM9 A;  1K83 C;  4KB2 A;  1WCM C;  4IOA S;  2PMZ D;  4MEY A;  2KPU A;  3HKZ L;  3A8I A;  2R92 K;  2R92 A;  3GEI A;  4BBS K;  4G0U A;  5E68 A;  4GTD A;  1WOP A;  5M5W K;  4GTF A;  3GSI A;  4O2D A;  2GSN A;  5JVO A;  5IOQ A;  2E2H C;  1YNJ A;  3AQP A;  2XCQ A;  4GTE A;  4A3F K;  4AYB D;  2W7V A;  1VLO A;  4BXX K;  4OIO A;  3LAJ A;  5TMC A;  3ADA C;  3FKI K;  3GEH A;  3FKI A;  4GTL A;  1I3Q C;  1F7U A;  4DDQ A;  3RZD C;  3GTJ K;  2NVT C;  3GTJ A;  3GTK C;  4C3H K;  1WOS A;  3H0G C;  1TWA C;  3RZO K;  2ZJR S;  1O25 A;  2WB1 L;  5IP7 K;  4A3J K;  3TFI A;  2ZJQ S;  1EQR A;  4Y52 C;  4OIQ A;  3HOV C;  5IYB K;  3PO2 K;  2B63 A;  4A3G C;  5JVH S;  3K7A K;  5HQH A;  4A3M K;  1YNN A;  1SFO C;  3H3V D;  2Y0S L;  4OIP A;  4OIN A;  4QIW L;  2P5M A;  3S15 K;  4A3C C;  4P9S A;  3TFH A;  1TWF C;  4A3K K;  2JA6 K;  2JA6 A;  5TJ3 A;  5FLM K;  2JA8 C;  1O29 A;  4QJV A;  2GSO A;  2PA8 L;  3HOW C;  1F7V A;  2GAG C;  4KN7 A;  3FHZ A;  5HL8 A;  2Y0S D;  5C4J K;  2JA5 C;  2YU9 K;  2PPB A;  2YU9 A;  4YFX A;  3S2H K;  3CQZ C;  3GTL C;  3GTM C;  3SZY A;  1WQG A;  3GTG K;  3LYW A;  3OEP A;  1WQF A;  3AQO A;  4C3I C;  3S1M C;  3NUH A;  2PHC B;  1EFW A;  1YCL A;  3VA7 A;  1EI6 A;  1I6H C;  1DD5 A;  4GTC A;  3HOU K;  2A69 A;  4A3D C;  4BY7 C;  5M5Y K;  1JQW A;  2NVY C;  5EGE A;  4NOI A;  4BLA A;  3HOZ C;  3HOY C;  4XLP A;  3S1Q C;  1TWH K;  1TWH A;  4KAW X;  1TWG K;  3ERE D;  1TWG A;  3ORE A;  3GEE A;  1IW7 A;  4GFQ A;  5C3E K;  2A68 A;  4KAR A;  4AH6 A;  1HQM A;  1I50 K;  1I50 A;  2A6H A;  1O2A A;  5IOT A;  3N3Y A;  3MML B;  4G0V A;  2JA7 K;  1TWC C;  2VUM C;  4A3E K;  3FOE A;  2JA7 A;  1IS1 A;  1WIH A;  2PMZ L;  3S16 K;  4KB4 A;  3S14 C;  3GTO C;  1XZQ B;  3GTQ A;  3M4O C;  2NVX K;  2NVX A;  4BY1 C;  4G0W A;  3S1R C;  2E2J K;  1WSV A;  1K83 A;  5M3M K;  4LOW A;  1WCM A;  1O27 A;  2R7Z C;  1FEU A;  3LAP A;  4KAS A;  1IQ0 A;  5IP9 C;  1VH2 A;  2EBB A;  3OPF A;  4GZY A;  4KMD A;  1C0A A;  4AYB L;  1XPP A;  1Y1W C;  4MQ9 A;  4Q4Z A;  2CW0 A;  3TFJ A;  4WFN S;  2P8T A;  3FOF A;  4J3N A;  2NVQ K;  1WOO A;  4OIR A;  2E2H A;  3L4J A;  4BBS C;  1O26 A;  5IOS A;  1EK8 A;  1L0W A;  4ILD A;  4C45 A;  2E2I C;  1J6V A;  3S2D C;  4G7Z A;  2R93 C;  5M3F K;  1I3Q K;  4YG2 A;  4A3F C;  1I3Q A;  1BDF A;  3CAG A;  3RZD K;  1XZP A;  4C3J C;  3T02 A;  4P5A A;  4BXX C;  1ISE A;  3GTK A;  4A3B K;  4PAB A;  2RH6 A;  1I6V A;  3GTP C;  1TWA K;  3H0G A;  3H3V L;  1TWA A;  1EH1 A;  1IL2 A;  1WSR A;  2L5N A;  3N0C A;  4BLB A;  2B63 K;  3HOX C;  3HOV K;  5HL7 S;  4C3H C;  3S1N C;  3PIO S;  1UV7 A;  5TMF A;  4A3G K;  1B4A A;  2ZJP S;  3V4G A;  1DCH A;  2V6T A;  4YFK A;  1VGX A;  1SFO A;  4JK1 A;  4A3C K;  1TWF K;  3PIP S;  5JVG S;  1TWF A;  3BP3 A;  1O2B A;  1XZP B;  1XXA A;  4IOC S;  3G4C A;  5EGH A;  3S15 C;  2JA5 K;  4WCE S;  2JA5 A;  5FLM C;  3CQZ K;  1Y1V C;  4LLG A;  1WQH A;  3CQZ A;  3GTL A;  1B4B A;  3GTM K;  5IYD C;  3GTM A;  5M5X K;  1XZQ A;  3L4K A;  4A3I K;  5C44 C;  3T01 A;  4C3I K;  3S1M K;  2O5J A;  4X6A C;  5C4X C;  2CFA A;  3M3Y K;  4LJZ A;  1I6H K;  4A3D K;  4BY7 K;  3GTG C;  3GIR A;  4C2M C;  2NVY A;  4A93 C;  1BJT A;  3HOY K;  3I4M C;  1PJ7 A;  3PO3 C;  5IYC K;  4KMH A;  5JFE A;  3S1Q K;  2XCO A;  4BBR C;  4A3L K;  4FM9 A;  4Y7N C;  5IOR A;  3I4N C;  4LK0 A;  4KN4 A;  2VUM K;  1TWC A;  3GTQ K;  2VUM A;  1G51 A;  1JVI A;  2ZUE A;  3S14 K;  3Q3Q A;  4KMU A;  3AD7 C;  3GTO K;  2CFA B;  3GTO A;  1JOE A;  2KXY A;  1R9T C;  3M4O K;  1PJ5 A;  4G7H A;  1J6W A;  4KMA A;  1K83 K;  4BY1 K;  4A3E C;  3S1R K;  1VRQ C;  2A6E A;  1WCM K;  4WFA S;  3S16 C;  1F93 A;  4WF9 S;  3DLL S;  1INN A;  3EQL A;  3S17 C;  4PAA A;  2R7Z K;  1XXB A;  5CHP A;  2R7Z A;  2D6F C;  1WOR A;  5IP9 K;  1USM A;  1Y1W K;  2R92 C;  4GT9 A;  1Y1W A; 
#chains in the Genus database with same CATH homology
 2Y0S D;  5C3E C;  4QJV B;  5C4J K;  2JA5 C;  2E2H K;  2YU9 K;  2PPB A;  1I6V A;  4YFX A;  3GTP C;  1TWA K;  3H3V L;  1I50 C;  3S2H K;  3CQZ C;  3GTL C;  3GTM C;  4A3L C;  3GTG K;  2JA7 C;  1R9T K;  3HOX C;  2B63 K;  3HOV K;  4C3I C;  3S1M C;  4C3H C;  3S1N C;  3GTQ C;  1I6H C;  5TMF A;  2A69 A;  2BE5 A;  3HOU K;  4A3G K;  2NVX C;  2NVQ C;  3HKZ D;  4A3D C;  4BY7 C;  5M5Y K;  4YFK A;  2E2I K;  3S15 K;  2NVY C;  4NOI A;  2NVT K;  3S2D K;  4XLN A;  2O5I A;  3S17 K;  4JK1 A;  2R93 K;  2E2J C;  4G7O A;  4MEX A;  4A3C K;  1TWF K;  1K83 C;  3HOZ C;  3HOY C;  3GTK K;  1WCM C;  4XLP A;  4Q5S A;  3S1Q C;  3FKI C;  1TWH K;  4C3J K;  2PMZ D;  4MEY A;  1TWG K;  3H0G K;  2WAQ L;  1IW7 A;  3HKZ L;  3GTJ C;  2R92 K;  5C3E K;  1SMY A;  2A68 A;  3S15 C;  2JA5 K;  1HQM A;  3GTP K;  4BBS K;  5FLM C;  1I50 K;  4Y52 K;  3CQZ K;  1Y1V C;  4LLG A;  2A6H A;  5M5W K;  3GTM K;  5IYD C;  2JA7 K;  1TWC C;  2VUM C;  5M5X K;  4A3E K;  3HOX K;  5C44 C;  4A3I K;  5D4D A;  4C3I K;  4A3B C;  2PMZ L;  3RZO C;  2WAQ D;  3S16 K;  3S1M K;  2O5J A;  3S1N K;  3WOD A;  3S14 C;  4X6A C;  5IP7 C;  4A3J C;  3GTO C;  2E2H C;  1YNJ A;  5C4X C;  3M3Y K;  4LJZ A;  1I6H K;  3M4O C;  1SFO K;  5IYB C;  2NVX K;  4A3D K;  4BY7 K;  3GTG C;  4BY1 C;  4A3F K;  3S1R C;  2B63 C;  4YFN A;  4C2M C;  3PO2 C;  5FJ8 K;  2JA8 K;  4AYB D;  4A93 C;  3K7A C;  2E2J K;  3HOY K;  4BXX K;  3HOW K;  4A3M C;  5M3M K;  4OIO A;  3I4M C;  5TMC A;  3PO3 C;  3FKI K;  5IYC K;  3S1Q K;  2R7Z C;  2JA6 C;  1I3Q C;  2WB1 D;  4A3K C;  3RZD C;  3GTL K;  3GTJ K;  2NVT C;  2R7Z K;  5IP9 C;  4BBR C;  4A3L K;  4GZY A;  4Y7N C;  3GTK C;  3I4N C;  4AYB L;  4ZH4 A;  1XPP A;  1Y1V K;  4LK0 A;  4KN4 A;  1Y1W C;  4MQ9 A;  4Q4Z A;  4C3H K;  2CW0 A;  5IYD K;  2VUM K;  5C4J C;  2YU9 C;  3H0G C;  5C44 K;  3GTQ K;  1TWA C;  3RZO K;  3S2H C;  2NVQ K;  3S14 K;  4X6A K;  4OIR A;  2WB1 L;  5IP7 K;  4KMU A;  4QIW D;  4A3J K;  5C4X K;  3GTO K;  2NVY K;  1R9T C;  4Y52 C;  4OIQ A;  3HOV C;  4BBS C;  3M4O K;  5IYB K;  4G7H A;  4XSX A;  4XSZ A;  1K83 K;  4BY1 K;  3HOZ K;  4A3E C;  4A3I C;  3S1R K;  4C2M K;  3PO2 K;  2A6E A;  3DXJ A;  1WCM K;  2PA8 D;  3HOU C;  3S16 C;  4A3G C;  4A93 K;  3K7A K;  4A3M K;  2E2I C;  3M3Y C;  3I4M K;  1YNN A;  3PO3 K;  1SFO C;  3H3V D;  2Y0S L;  3EQL A;  4OIP A;  4OIN A;  3S17 C;  3S2D C;  4G7Z A;  4QIW L;  4LK1 A;  2R93 C;  5M3F K;  4A3C C;  2JA6 K;  1I3Q K;  1TWF C;  4A3K K;  4YG2 A;  4A3F C;  5FLM K;  1BDF A;  3RZD K;  2JA8 C;  5IP9 K;  1ZYR A;  1TWH C;  4C3J C;  4BBR K;  4QJV A;  1TWC K;  4Y7N K;  1TWG C;  3I4N K;  2PA8 L;  4BXX C;  3HOW C;  4A3B K;  4KN7 A;  5IYC C;  1Y1W K;  2R92 C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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